Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79788.t1 | XP_003619836.1 | 97.8 | 465 | 10 | 0 | 1 | 465 | 1 | 465 | 6.60E-269 | 936 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79788.t1 | Q9M571 | 73.4 | 462 | 123 | 0 | 4 | 465 | 1 | 462 | 2.4e-203 | 709.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79788.t1 | G7KPT7 | 97.8 | 465 | 10 | 0 | 1 | 465 | 1 | 465 | 4.8e-269 | 936.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049378 | MS.gene79788 | 0.809228 | 2.10E-50 | -1.69E-46 |
| MS.gene050787 | MS.gene79788 | 0.832508 | 9.08E-56 | -1.69E-46 |
| MS.gene051173 | MS.gene79788 | 0.829998 | 3.76E-55 | -1.69E-46 |
| MS.gene051860 | MS.gene79788 | 0.82634 | 2.86E-54 | -1.69E-46 |
| MS.gene053836 | MS.gene79788 | 0.815385 | 9.50E-52 | -1.69E-46 |
| MS.gene054011 | MS.gene79788 | 0.804134 | 2.50E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene79788 | 0.81641 | 5.61E-52 | -1.69E-46 |
| MS.gene054468 | MS.gene79788 | 0.812118 | 4.98E-51 | -1.69E-46 |
| MS.gene054473 | MS.gene79788 | 0.835037 | 2.12E-56 | -1.69E-46 |
| MS.gene054918 | MS.gene79788 | 0.810956 | 8.90E-51 | -1.69E-46 |
| MS.gene055356 | MS.gene79788 | 0.812228 | 4.71E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79788.t1 | MTR_6g069600 | 97.849 | 465 | 10 | 0 | 1 | 465 | 1 | 465 | 0.0 | 951 |
| MS.gene79788.t1 | MTR_8g107370 | 80.172 | 464 | 89 | 2 | 1 | 464 | 1 | 461 | 0.0 | 752 |
| MS.gene79788.t1 | MTR_8g107370 | 81.416 | 452 | 83 | 1 | 13 | 464 | 5 | 455 | 0.0 | 751 |
| MS.gene79788.t1 | MTR_8g107370 | 79.828 | 466 | 91 | 2 | 1 | 466 | 1 | 463 | 0.0 | 751 |
| MS.gene79788.t1 | MTR_8g107370 | 81.093 | 439 | 80 | 2 | 1 | 439 | 1 | 436 | 0.0 | 720 |
| MS.gene79788.t1 | MTR_1g014690 | 28.302 | 159 | 102 | 4 | 290 | 436 | 75 | 233 | 8.17e-13 | 69.3 |
| MS.gene79788.t1 | MTR_1g014690 | 33.019 | 106 | 69 | 1 | 290 | 393 | 130 | 235 | 1.06e-12 | 69.7 |
| MS.gene79788.t1 | MTR_3g032530 | 31.034 | 116 | 78 | 1 | 280 | 393 | 86 | 201 | 1.30e-11 | 66.2 |
| MS.gene79788.t1 | MTR_3g032530 | 31.034 | 116 | 78 | 1 | 280 | 393 | 43 | 158 | 1.41e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79788.t1 | AT1G73600 | 72.848 | 453 | 123 | 0 | 13 | 465 | 20 | 472 | 0.0 | 714 |
| MS.gene79788.t1 | AT1G73600 | 72.848 | 453 | 123 | 0 | 13 | 465 | 6 | 458 | 0.0 | 714 |
| MS.gene79788.t1 | AT3G18000 | 72.113 | 459 | 128 | 0 | 7 | 465 | 1 | 459 | 0.0 | 713 |
| MS.gene79788.t1 | AT1G48600 | 72.467 | 454 | 125 | 0 | 12 | 465 | 6 | 459 | 0.0 | 706 |
| MS.gene79788.t1 | AT1G48600 | 73.077 | 442 | 119 | 0 | 24 | 465 | 2 | 443 | 0.0 | 690 |
| MS.gene79788.t1 | AT5G13710 | 29.697 | 165 | 103 | 4 | 259 | 411 | 55 | 218 | 3.34e-13 | 70.9 |
| MS.gene79788.t1 | AT5G13710 | 29.697 | 165 | 103 | 4 | 259 | 411 | 55 | 218 | 3.34e-13 | 70.9 |
| MS.gene79788.t1 | AT1G64970 | 29.808 | 104 | 71 | 1 | 292 | 393 | 130 | 233 | 2.32e-11 | 65.5 |
Find 77 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACTCTATGAACATGTTTA+TGG | 0.176357 | 6.2:+72782572 | MS.gene79788:CDS |
| CCTTACTTTGATGTGTAATA+AGG | 0.202341 | 6.2:-72783303 | None:intergenic |
| TGCTGTTGATCAAACCAATT+TGG | 0.240782 | 6.2:+72784028 | MS.gene79788:CDS |
| AGCTAGAGAAATCATGTTTA+TGG | 0.260404 | 6.2:-72783174 | None:intergenic |
| TCCTTTGAGCTTTCTCTTGT+GGG | 0.273120 | 6.2:+72782240 | MS.gene79788:CDS |
| TCATTCATATATGGCTAGTT+TGG | 0.295245 | 6.2:+72778900 | None:intergenic |
| CTAGATGTTGGTTGTGGTAT+TGG | 0.308873 | 6.2:+72783092 | MS.gene79788:CDS |
| TCTTTGTCATGCAGATTTGT+TGG | 0.327163 | 6.2:+72782468 | MS.gene79788:intron |
| ACATGAACTTGACATTCTTA+TGG | 0.327278 | 6.2:-72781174 | None:intergenic |
| TCATGCAGATTTGTTGGATA+TGG | 0.335290 | 6.2:+72782474 | MS.gene79788:intron |
| TTGCAGAATGAAAATACTAA+TGG | 0.336708 | 6.2:+72781148 | MS.gene79788:intron |
| CCTTCAGAAATATGCAAGTT+TGG | 0.339863 | 6.2:-72781214 | None:intergenic |
| TGGAAGATTTACAACTGAAT+TGG | 0.343234 | 6.2:+72780816 | MS.gene79788:CDS |
| AATACAATCCAACTCACTAT+AGG | 0.347505 | 6.2:+72781739 | MS.gene79788:CDS |
| GAATCTTGTTTCCACCAATC+TGG | 0.358429 | 6.2:+72781702 | MS.gene79788:CDS |
| GTTAAATCACAAGATGATAG+AGG | 0.369519 | 6.2:+72782503 | MS.gene79788:CDS |
| GTCTCTCTTCTTTGTCGAGA+TGG | 0.371915 | 6.2:-72779222 | None:intergenic |
| TAGAGGGTTTCAACGGTTCT+TGG | 0.373209 | 6.2:+72782520 | MS.gene79788:CDS |
| CTCCTTTGAGCTTTCTCTTG+TGG | 0.377353 | 6.2:+72782239 | MS.gene79788:CDS |
| TTGGTTACTCATGTATCTTT+CGG | 0.382805 | 6.2:+72781261 | MS.gene79788:CDS |
| ATACAATCCAACTCACTATA+GGG | 0.384922 | 6.2:+72781740 | MS.gene79788:CDS |
| AGGGAAATTGTGGCAAAGTT+AGG | 0.389582 | 6.2:+72783047 | MS.gene79788:CDS |
| GAGTGTGTGACAAACCAAAT+TGG | 0.399779 | 6.2:-72784042 | None:intergenic |
| TTAGAGCTTGGAGCAGGTAT+TGG | 0.405980 | 6.2:+72780796 | MS.gene79788:CDS |
| CAAACCTTAGTGTAAAATCT+TGG | 0.408255 | 6.2:-72781765 | None:intergenic |
| GTTCTTGAAAACTCTACAAA+TGG | 0.411827 | 6.2:+72784133 | MS.gene79788:intron |
| GTCAAATGGTTAAATGTTGA+TGG | 0.412539 | 6.2:+72781663 | MS.gene79788:CDS |
| TGACATGAAAGCATATTATC+AGG | 0.414876 | 6.2:+72783553 | MS.gene79788:CDS |
| TCTCTCTTCTTTGTCGAGAT+GGG | 0.418673 | 6.2:-72779221 | None:intergenic |
| ACTGAATTGGCTCAGAAAGC+TGG | 0.429992 | 6.2:+72780829 | MS.gene79788:CDS |
| GTGAAGTGCAGAGAAGTTAC+TGG | 0.432592 | 6.2:+72779143 | MS.gene79788:CDS |
| TCACAGATGCTTGAGAATGC+TGG | 0.438992 | 6.2:+72783990 | MS.gene79788:intron |
| TTCTCTTTGAATCTCCAGAT+TGG | 0.440419 | 6.2:-72781716 | None:intergenic |
| TGTCATATGAGTGATGATAA+TGG | 0.457058 | 6.2:+72782213 | MS.gene79788:CDS |
| TTTGTGAGCACAGGAGGACT+TGG | 0.457900 | 6.2:+72782602 | MS.gene79788:CDS |
| CTTGTGGGCTGCAAATGCAT+TGG | 0.462246 | 6.2:+72782255 | MS.gene79788:CDS |
| TAGCTGAAAGGATGGTCAAA+TGG | 0.462289 | 6.2:+72781649 | MS.gene79788:CDS |
| TAAAATGATCTGAACAATGT+TGG | 0.463358 | 6.2:-72783419 | None:intergenic |
| GTCATATGAGTGATGATAAT+GGG | 0.464751 | 6.2:+72782214 | MS.gene79788:CDS |
| TCTTTGAATCTCCAGATTGG+TGG | 0.475051 | 6.2:-72781713 | None:intergenic |
| AAATAAGAAGAATCAAAATC+AGG | 0.476569 | 6.2:+72782290 | MS.gene79788:CDS |
| CTGAATTGGCTCAGAAAGCT+GGG | 0.489249 | 6.2:+72780830 | MS.gene79788:CDS |
| TTTGTCGAGATGGGAGGCGT+TGG | 0.492887 | 6.2:-72779212 | None:intergenic |
| TCTCTATTACCATCATATGA+AGG | 0.495751 | 6.2:+72780763 | MS.gene79788:CDS |
| CTTGGTTCCCTATAGTGAGT+TGG | 0.500725 | 6.2:-72781747 | None:intergenic |
| TATGAACATGTTTATGGTCA+AGG | 0.501805 | 6.2:+72782578 | MS.gene79788:CDS |
| GTTGGTTGTGGTATTGGAGG+TGG | 0.503392 | 6.2:+72783098 | MS.gene79788:CDS |
| GATAATATGCTTTCATGTCA+TGG | 0.509905 | 6.2:-72783550 | None:intergenic |
| AATCAACCTTCTTGTTCTCA+AGG | 0.512925 | 6.2:-72784166 | None:intergenic |
| ACTGACTATTGCAAAAGTGT+TGG | 0.520445 | 6.2:+72783476 | MS.gene79788:CDS |
| CTAGCTATCGAACGTGCCAT+CGG | 0.524887 | 6.2:+72783191 | MS.gene79788:CDS |
| GATGTTGGTTGTGGTATTGG+AGG | 0.526855 | 6.2:+72783095 | MS.gene79788:CDS |
| CCAAACTTGCATATTTCTGA+AGG | 0.528360 | 6.2:+72781214 | MS.gene79788:CDS |
| GGTCAAGGCTTTGTGAGCAC+AGG | 0.534562 | 6.2:+72782593 | MS.gene79788:CDS |
| CATTGAGAGTGCAATAAAGA+AGG | 0.534730 | 6.2:+72780873 | MS.gene79788:CDS |
| GTAATTAAAAGTGTACCTCC+AGG | 0.542732 | 6.2:-72783455 | None:intergenic |
| AGCTGGGCAATTGCTTGCTG+TGG | 0.543614 | 6.2:+72780846 | MS.gene79788:CDS |
| CTCTTCTTTGTCGAGATGGG+AGG | 0.545903 | 6.2:-72779218 | None:intergenic |
| CAAGGCTTTGTGAGCACAGG+AGG | 0.555847 | 6.2:+72782596 | MS.gene79788:CDS |
| TACTGCATATTTGAGTCCGA+TGG | 0.562209 | 6.2:-72783207 | None:intergenic |
| ATCAACCTTCTTGTTCTCAA+GGG | 0.563447 | 6.2:-72784165 | None:intergenic |
| TTAAATCACAAGATGATAGA+GGG | 0.564358 | 6.2:+72782504 | MS.gene79788:CDS |
| AGAAACAACAAGGGAAATTG+TGG | 0.570096 | 6.2:+72783037 | MS.gene79788:intron |
| CATGTATCTTTCGGATGAAG+AGG | 0.574088 | 6.2:+72781270 | MS.gene79788:CDS |
| ATTCTTGAGCAGAAACAACA+AGG | 0.575658 | 6.2:+72783027 | MS.gene79788:intron |
| TGAAATTGTTGAAAGATGGA+AGG | 0.578969 | 6.2:+72784629 | MS.gene79788:intron |
| AAATGCCCTTGAGAACAAGA+AGG | 0.581850 | 6.2:+72784160 | MS.gene79788:CDS |
| GCCCACAAGAGAAAGCTCAA+AGG | 0.603698 | 6.2:-72782241 | None:intergenic |
| AAAGTACTAGATGTTGGTTG+TGG | 0.613287 | 6.2:+72783086 | MS.gene79788:CDS |
| GAGAAATCATGTTTATGGAG+AGG | 0.618544 | 6.2:-72783169 | None:intergenic |
| AAGATGATAGAGGGTTTCAA+CGG | 0.629674 | 6.2:+72782513 | MS.gene79788:CDS |
| TTCTTGAGCAGAAACAACAA+GGG | 0.645125 | 6.2:+72783028 | MS.gene79788:intron |
| AGTTTGGAAGCAATGAAACA+AGG | 0.646586 | 6.2:+72778916 | MS.gene79788:CDS |
| GCAAAGTTAGGACTAAAGCC+AGG | 0.647033 | 6.2:+72783059 | MS.gene79788:CDS |
| TATAAGTGGTTGAAGCCTGG+AGG | 0.668799 | 6.2:+72783440 | MS.gene79788:CDS |
| TAGTGTTGAGTATAACCACA+AGG | 0.711600 | 6.2:+72782544 | MS.gene79788:CDS |
| CATAGAGTAAGATATCCTTG+TGG | 0.717691 | 6.2:-72782559 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAGTTAAAAAATATGAT+AGG | - | chr6.2:72780521-72780540 | None:intergenic | 10.0% |
| !! | ATTTATAATTCATTTACTTT+AGG | + | chr6.2:72782646-72782665 | MS.gene79788:intron | 10.0% |
| !! | CATAAATATACATTTAAATT+GGG | - | chr6.2:72779762-72779781 | None:intergenic | 10.0% |
| !! | GATATTTATCAAAATAAAAT+TGG | + | chr6.2:72781075-72781094 | MS.gene79788:intron | 10.0% |
| !!! | AAAAAAGTGTATTTTTTTTA+AGG | - | chr6.2:72779340-72779359 | None:intergenic | 10.0% |
| !!! | AATTTGATTTGTAATAATTT+AGG | + | chr6.2:72783654-72783673 | MS.gene79788:intron | 10.0% |
| !!! | ATCAATTTTAAATTACATAT+AGG | + | chr6.2:72780735-72780754 | MS.gene79788:intron | 10.0% |
| !!! | ATTTGATTTGTAATAATTTA+GGG | + | chr6.2:72783655-72783674 | MS.gene79788:intron | 10.0% |
| !!! | TGATTTTATCAAATTATTAA+TGG | - | chr6.2:72783761-72783780 | None:intergenic | 10.0% |
| !!! | TTTTAATGGTAAATATTAAT+AGG | - | chr6.2:72779446-72779465 | None:intergenic | 10.0% |
| !! | AAAAATATTGTATGATATTC+AGG | - | chr6.2:72781130-72781149 | None:intergenic | 15.0% |
| !! | AAAATATTGTATGATATTCA+GGG | - | chr6.2:72781129-72781148 | None:intergenic | 15.0% |
| !! | AAATAATGTATTATATTGCA+TGG | + | chr6.2:72779028-72779047 | MS.gene79788:intron | 15.0% |
| !! | AAATGAATTATAAATCATTG+AGG | - | chr6.2:72782641-72782660 | None:intergenic | 15.0% |
| !! | AAATTAGACACATATATTAA+GGG | - | chr6.2:72781509-72781528 | None:intergenic | 15.0% |
| !! | AATGTTCTATGAATTTATAT+AGG | + | chr6.2:72783391-72783410 | MS.gene79788:intron | 15.0% |
| !! | ACAACTTGTATTAAATTTAA+AGG | + | chr6.2:72779920-72779939 | MS.gene79788:intron | 15.0% |
| !! | AGATATAATCACAATAAAAA+CGG | - | chr6.2:72782885-72782904 | None:intergenic | 15.0% |
| !! | ATATAATTACATTAACAACA+AGG | - | chr6.2:72783586-72783605 | None:intergenic | 15.0% |
| !! | ATATATTAAGGGAAAAAAAA+TGG | - | chr6.2:72781498-72781517 | None:intergenic | 15.0% |
| !! | ATTAGATTATACATAGATTA+AGG | + | chr6.2:72779065-72779084 | MS.gene79788:intron | 15.0% |
| !! | CAAAATAAATGTAGAAAATA+AGG | - | chr6.2:72782139-72782158 | None:intergenic | 15.0% |
| !! | CAACTTGTATTAAATTTAAA+GGG | + | chr6.2:72779921-72779940 | MS.gene79788:intron | 15.0% |
| !! | CCAATTTAAATGTATATTTA+TGG | + | chr6.2:72779760-72779779 | MS.gene79788:intron | 15.0% |
| !! | CCATAAATATACATTTAAAT+TGG | - | chr6.2:72779763-72779782 | None:intergenic | 15.0% |
| !! | TAAATTAGACACATATATTA+AGG | - | chr6.2:72781510-72781529 | None:intergenic | 15.0% |
| !! | TAATAGTAATCAATAATTAC+AGG | - | chr6.2:72780650-72780669 | None:intergenic | 15.0% |
| !! | TAGTATAAAACAAAGTAATA+AGG | - | chr6.2:72784067-72784086 | None:intergenic | 15.0% |
| !! | TATGTAAGATTTCTAATAAA+TGG | - | chr6.2:72782776-72782795 | None:intergenic | 15.0% |
| !! | TATTGTATGTCAATTAAATA+AGG | - | chr6.2:72782401-72782420 | None:intergenic | 15.0% |
| !! | TGTTATTATTATATTCTAAG+TGG | + | chr6.2:72780615-72780634 | MS.gene79788:intron | 15.0% |
| !!! | AATATTTTGTTTTACTACTA+CGG | + | chr6.2:72781295-72781314 | MS.gene79788:intron | 15.0% |
| !!! | CTCATATTTAACTTTTTTTT+TGG | + | chr6.2:72780486-72780505 | MS.gene79788:intron | 15.0% |
| !!! | TAATAGGTTAATTTTTTGAA+GGG | - | chr6.2:72779430-72779449 | None:intergenic | 15.0% |
| !!! | TATAATCAAACAATTGTTTT+TGG | - | chr6.2:72781824-72781843 | None:intergenic | 15.0% |
| !!! | TCTTTTATGTTGTTAATTAT+AGG | + | chr6.2:72780203-72780222 | MS.gene79788:intron | 15.0% |
| !!! | TTAATAGGTTAATTTTTTGA+AGG | - | chr6.2:72779431-72779450 | None:intergenic | 15.0% |
| !!! | TTAGAATTTACTTTTTATGA+TGG | + | chr6.2:72780363-72780382 | MS.gene79788:intron | 15.0% |
| !!! | TTGATTTGATATTTTCAAAT+TGG | + | chr6.2:72781242-72781261 | MS.gene79788:CDS | 15.0% |
| !!! | TTTCTTTTCTTTCTATATAA+AGG | + | chr6.2:72779370-72779389 | MS.gene79788:intron | 15.0% |
| !!! | TTTTTCTATTTGTGTAAAAA+AGG | + | chr6.2:72780090-72780109 | MS.gene79788:intron | 15.0% |
| !! | AAACAATAACATGTCTAATA+GGG | - | chr6.2:72780998-72781017 | None:intergenic | 20.0% |
| !! | AAATAAATTTGAGTCATCTA+TGG | - | chr6.2:72781474-72781493 | None:intergenic | 20.0% |
| !! | AAATAAGAAGAATCAAAATC+AGG | + | chr6.2:72782290-72782309 | MS.gene79788:CDS | 20.0% |
| !! | AACAACATAAAAGAAAATTG+TGG | - | chr6.2:72780197-72780216 | None:intergenic | 20.0% |
| !! | ACAACATAAAAGAAAATTGT+GGG | - | chr6.2:72780196-72780215 | None:intergenic | 20.0% |
| !! | ACAATAAACAAAAAGTTTCA+TGG | + | chr6.2:72784471-72784490 | MS.gene79788:intron | 20.0% |
| !! | ACTAACAGAATTATGTTTAT+GGG | + | chr6.2:72780420-72780439 | MS.gene79788:intron | 20.0% |
| !! | ATAATGAAATTGTTGAAAGA+TGG | + | chr6.2:72784625-72784644 | MS.gene79788:intron | 20.0% |
| !! | ATTATTAAAATCGAGAGTTT+AGG | - | chr6.2:72784440-72784459 | None:intergenic | 20.0% |
| !! | CAATATGAATCCAATATTTA+TGG | + | chr6.2:72779627-72779646 | MS.gene79788:intron | 20.0% |
| !! | CATAAATATTGGATTCATAT+TGG | - | chr6.2:72779629-72779648 | None:intergenic | 20.0% |
| !! | GAAAAACACAGATAATAAAA+TGG | - | chr6.2:72784092-72784111 | None:intergenic | 20.0% |
| !! | GAATAGTTAGTTAGTTATAT+AGG | - | chr6.2:72779282-72779301 | None:intergenic | 20.0% |
| !! | TAACTAAATGTTACAGAAAA+AGG | - | chr6.2:72783368-72783387 | None:intergenic | 20.0% |
| !! | TATCAAATTATTAATGGTGT+CGG | - | chr6.2:72783755-72783774 | None:intergenic | 20.0% |
| !! | TTAGTTAGTTATATAGGATT+AGG | - | chr6.2:72779276-72779295 | None:intergenic | 20.0% |
| !! | TTGGTTCAAAAAAATACAAA+TGG | - | chr6.2:72782963-72782982 | None:intergenic | 20.0% |
| !! | TTTAAATACCTACATGAAAA+AGG | - | chr6.2:72782190-72782209 | None:intergenic | 20.0% |
| !! | TTTAACCTGAAATTAATCAA+GGG | - | chr6.2:72781625-72781644 | None:intergenic | 20.0% |
| !!! | AGTACACACATTTTTTTTAA+TGG | - | chr6.2:72779460-72779479 | None:intergenic | 20.0% |
| !!! | TCGATTTTAATAATCTGTTT+AGG | + | chr6.2:72784446-72784465 | MS.gene79788:intron | 20.0% |
| !!! | TTGTTGAAATCTTCATTTTT+AGG | + | chr6.2:72784596-72784615 | MS.gene79788:intron | 20.0% |
| !!! | TTTAAATTGGGTTTTTTAGT+AGG | - | chr6.2:72779750-72779769 | None:intergenic | 20.0% |
| !!! | TTTTAACCTGAAATTAATCA+AGG | - | chr6.2:72781626-72781645 | None:intergenic | 20.0% |
| ! | AAAATTAAATCGAGGAATCA+AGG | + | chr6.2:72784521-72784540 | MS.gene79788:intron | 25.0% |
| ! | AAATAAAAGCCTTAACAACA+AGG | - | chr6.2:72781600-72781619 | None:intergenic | 25.0% |
| ! | AACATAAAAGAAAATTGTGG+GGG | - | chr6.2:72780194-72780213 | None:intergenic | 25.0% |
| ! | AATAAAAGCCTTAACAACAA+GGG | - | chr6.2:72781599-72781618 | None:intergenic | 25.0% |
| ! | AGATCTACATCTTACTAATT+TGG | + | chr6.2:72780160-72780179 | MS.gene79788:intron | 25.0% |
| ! | AGGTTAAAAATTTAGCTGAA+AGG | + | chr6.2:72781637-72781656 | MS.gene79788:intron | 25.0% |
| ! | ATATTTATGGTGAGTTTGAT+CGG | + | chr6.2:72779773-72779792 | MS.gene79788:intron | 25.0% |
| ! | ATCTACATCTTACTAATTTG+GGG | + | chr6.2:72780162-72780181 | MS.gene79788:intron | 25.0% |
| ! | CAAACAATAACATGTCTAAT+AGG | - | chr6.2:72780999-72781018 | None:intergenic | 25.0% |
| ! | CAACATAAAAGAAAATTGTG+GGG | - | chr6.2:72780195-72780214 | None:intergenic | 25.0% |
| ! | CAATTGTTTGATTATAGATG+AGG | + | chr6.2:72781828-72781847 | MS.gene79788:intron | 25.0% |
| ! | CACTAACAGAATTATGTTTA+TGG | + | chr6.2:72780419-72780438 | MS.gene79788:intron | 25.0% |
| ! | CAGATAAAACAGGATAAAAT+TGG | - | chr6.2:72779727-72779746 | None:intergenic | 25.0% |
| ! | CATAAACATAATTCTGTTAG+TGG | - | chr6.2:72780421-72780440 | None:intergenic | 25.0% |
| ! | CATGTATATGTAGAAATTAC+TGG | + | chr6.2:72779091-72779110 | MS.gene79788:intron | 25.0% |
| ! | GAATCCAATATTTATGGATT+TGG | + | chr6.2:72779633-72779652 | MS.gene79788:intron | 25.0% |
| ! | GAATTATGCAAGTTTACAAT+TGG | + | chr6.2:72784288-72784307 | MS.gene79788:intron | 25.0% |
| ! | GAGAAAAAAATTAGAAGTGA+AGG | - | chr6.2:72780469-72780488 | None:intergenic | 25.0% |
| ! | GATCTACATCTTACTAATTT+GGG | + | chr6.2:72780161-72780180 | MS.gene79788:intron | 25.0% |
| ! | TAAAAATTTAGCTGAAAGGA+TGG | + | chr6.2:72781641-72781660 | MS.gene79788:CDS | 25.0% |
| ! | TAAAATGATCTGAACAATGT+TGG | - | chr6.2:72783422-72783441 | None:intergenic | 25.0% |
| ! | TATATGATTGTGAACTTTGA+TGG | + | chr6.2:72782051-72782070 | MS.gene79788:intron | 25.0% |
| ! | TGATCCAAATCCATAAATAT+TGG | - | chr6.2:72779640-72779659 | None:intergenic | 25.0% |
| ! | TTAAATCACAAGATGATAGA+GGG | + | chr6.2:72782504-72782523 | MS.gene79788:CDS | 25.0% |
| ! | TTACTCTATGAACATGTTTA+TGG | + | chr6.2:72782572-72782591 | MS.gene79788:CDS | 25.0% |
| ! | TTGAAATTTCTATGCATGAT+TGG | - | chr6.2:72782982-72783001 | None:intergenic | 25.0% |
| ! | TTGCAGAATGAAAATACTAA+TGG | + | chr6.2:72781148-72781167 | MS.gene79788:intron | 25.0% |
| !! | ATTCTTTTATGTGATCTAAC+TGG | - | chr6.2:72781903-72781922 | None:intergenic | 25.0% |
| !! | TGTTCAGATCATTTTATAAG+TGG | + | chr6.2:72783426-72783445 | MS.gene79788:CDS | 25.0% |
| !!! | ATGATTAGATTTTGATCTGA+CGG | - | chr6.2:72781385-72781404 | None:intergenic | 25.0% |
| !!! | ATTACTGGAATGATTTTTTC+AGG | + | chr6.2:72779106-72779125 | MS.gene79788:intron | 25.0% |
| !!! | TTTCATTGATGATTTTTCTG+AGG | + | chr6.2:72784187-72784206 | MS.gene79788:CDS | 25.0% |
| AAATTAGTAGCACATACTTC+GGG | - | chr6.2:72779247-72779266 | None:intergenic | 30.0% | |
| AAATTTAAAGGGTCGTATTG+TGG | + | chr6.2:72779932-72779951 | MS.gene79788:intron | 30.0% | |
| AAGGCTTATGAATAGCAATT+TGG | - | chr6.2:72782120-72782139 | None:intergenic | 30.0% | |
| AATACAATCCAACTCACTAT+AGG | + | chr6.2:72781739-72781758 | MS.gene79788:CDS | 30.0% | |
| ACATGAACTTGACATTCTTA+TGG | - | chr6.2:72781177-72781196 | None:intergenic | 30.0% | |
| AGCTAGAGAAATCATGTTTA+TGG | - | chr6.2:72783177-72783196 | None:intergenic | 30.0% | |
| ATAATCGACATGAAATCAGA+CGG | - | chr6.2:72782918-72782937 | None:intergenic | 30.0% | |
| ATACAATATTCCAACACATC+TGG | + | chr6.2:72781358-72781377 | MS.gene79788:intron | 30.0% | |
| ATACAATCCAACTCACTATA+GGG | + | chr6.2:72781740-72781759 | MS.gene79788:CDS | 30.0% | |
| ATACCTACATGAAAAAGGAA+AGG | - | chr6.2:72782185-72782204 | None:intergenic | 30.0% | |
| CAAACCTTAGTGTAAAATCT+TGG | - | chr6.2:72781768-72781787 | None:intergenic | 30.0% | |
| CATGCCAATTATATTTGGAT+GGG | + | chr6.2:72779539-72779558 | MS.gene79788:intron | 30.0% | |
| CCTTACTTTGATGTGTAATA+AGG | - | chr6.2:72783306-72783325 | None:intergenic | 30.0% | |
| CCTTATTACACATCAAAGTA+AGG | + | chr6.2:72783303-72783322 | MS.gene79788:intron | 30.0% | |
| CTTCATGCAAAATTAAATCG+AGG | + | chr6.2:72784513-72784532 | MS.gene79788:intron | 30.0% | |
| GAAATTAGTAGCACATACTT+CGG | - | chr6.2:72779248-72779267 | None:intergenic | 30.0% | |
| GACTTCATTTAATCCAAATC+CGG | - | chr6.2:72781331-72781350 | None:intergenic | 30.0% | |
| GATAATATGCTTTCATGTCA+TGG | - | chr6.2:72783553-72783572 | None:intergenic | 30.0% | |
| GCAGAGTATATAAAAAAGAG+AGG | + | chr6.2:72783518-72783537 | MS.gene79788:CDS | 30.0% | |
| GTCAAATGGTTAAATGTTGA+TGG | + | chr6.2:72781663-72781682 | MS.gene79788:CDS | 30.0% | |
| GTCATATGAGTGATGATAAT+GGG | + | chr6.2:72782214-72782233 | MS.gene79788:CDS | 30.0% | |
| GTCGTATTGTGGTTTATTAA+GGG | + | chr6.2:72779943-72779962 | MS.gene79788:intron | 30.0% | |
| GTTAAATCACAAGATGATAG+AGG | + | chr6.2:72782503-72782522 | MS.gene79788:CDS | 30.0% | |
| GTTCTTGAAAACTCTACAAA+TGG | + | chr6.2:72784133-72784152 | MS.gene79788:intron | 30.0% | |
| TACACCATGCCAATTATATT+TGG | + | chr6.2:72779534-72779553 | MS.gene79788:intron | 30.0% | |
| TATATTCTAAGTGGAGAACA+AGG | + | chr6.2:72780624-72780643 | MS.gene79788:intron | 30.0% | |
| TATGAACATGTTTATGGTCA+AGG | + | chr6.2:72782578-72782597 | MS.gene79788:CDS | 30.0% | |
| TCTCTATTACCATCATATGA+AGG | + | chr6.2:72780763-72780782 | MS.gene79788:CDS | 30.0% | |
| TGAAATTGTTGAAAGATGGA+AGG | + | chr6.2:72784629-72784648 | MS.gene79788:intron | 30.0% | |
| TGGAAGATTTACAACTGAAT+TGG | + | chr6.2:72780816-72780835 | MS.gene79788:CDS | 30.0% | |
| TGTCATATGAGTGATGATAA+TGG | + | chr6.2:72782213-72782232 | MS.gene79788:CDS | 30.0% | |
| TGTTCTATGAATCACAGATA+CGG | + | chr6.2:72783709-72783728 | MS.gene79788:intron | 30.0% | |
| TTCAGTGTAATTACATGTGT+CGG | + | chr6.2:72783786-72783805 | MS.gene79788:intron | 30.0% | |
| TTGGTTACTCATGTATCTTT+CGG | + | chr6.2:72781261-72781280 | MS.gene79788:CDS | 30.0% | |
| TTTCTCCCTTGATTAATTTC+AGG | + | chr6.2:72781617-72781636 | MS.gene79788:intron | 30.0% | |
| ! | ATCAAAAAGTACAACGTTGT+TGG | + | chr6.2:72778990-72779009 | MS.gene79788:intron | 30.0% |
| ! | ATTACATCGAATGTTTTCTC+AGG | - | chr6.2:72783269-72783288 | None:intergenic | 30.0% |
| ! | TAAAGGTTGATTGATACATG+CGG | + | chr6.2:72779387-72779406 | MS.gene79788:intron | 30.0% |
| ! | TGACATGAAAGCATATTATC+AGG | + | chr6.2:72783553-72783572 | MS.gene79788:CDS | 30.0% |
| ! | TTTTAGTAGGCAGATAAAAC+AGG | - | chr6.2:72779737-72779756 | None:intergenic | 30.0% |
| ! | TTTTTGTCCTGTACAACAAT+CGG | + | chr6.2:72779874-72779893 | MS.gene79788:intron | 30.0% |
| !! | ACTGATTTTCCTTCATATGA+TGG | - | chr6.2:72780775-72780794 | None:intergenic | 30.0% |
| !! | TATCCTTTCCTTTTTCATGT+AGG | + | chr6.2:72782179-72782198 | MS.gene79788:intron | 30.0% |
| !!! | GTCGTTACTTTTTATAGACT+CGG | - | chr6.2:72784413-72784432 | None:intergenic | 30.0% |
| !!! | TTTCTCAGGATACGTTTTTT+TGG | - | chr6.2:72783255-72783274 | None:intergenic | 30.0% |
| AAAGACATGTTATAAGAGCG+AGG | + | chr6.2:72782075-72782094 | MS.gene79788:intron | 35.0% | |
| AAGATGATAGAGGGTTTCAA+CGG | + | chr6.2:72782513-72782532 | MS.gene79788:CDS | 35.0% | |
| AATCAACCTTCTTGTTCTCA+AGG | - | chr6.2:72784169-72784188 | None:intergenic | 35.0% | |
| AGAAACAACAAGGGAAATTG+TGG | + | chr6.2:72783037-72783056 | MS.gene79788:intron | 35.0% | |
| AGTGGGGACATTAATAAAGT+GGG | - | chr6.2:72780245-72780264 | None:intergenic | 35.0% | |
| AGTTTGGAAGCAATGAAACA+AGG | + | chr6.2:72778916-72778935 | MS.gene79788:CDS | 35.0% | |
| ATAAAATTGGATGCCCGTTT+AGG | - | chr6.2:72779714-72779733 | None:intergenic | 35.0% | |
| ATCAACCTTCTTGTTCTCAA+GGG | - | chr6.2:72784168-72784187 | None:intergenic | 35.0% | |
| ATTCTTGAGCAGAAACAACA+AGG | + | chr6.2:72783027-72783046 | MS.gene79788:intron | 35.0% | |
| CAAACACAAACTATGAAGCA+CGG | - | chr6.2:72783859-72783878 | None:intergenic | 35.0% | |
| CATAGAGTAAGATATCCTTG+TGG | - | chr6.2:72782562-72782581 | None:intergenic | 35.0% | |
| CCAAAGAGGATGAGAAATAA+TGG | - | chr6.2:72780136-72780155 | None:intergenic | 35.0% | |
| CCAACCCATCCAAATATAAT+TGG | - | chr6.2:72779546-72779565 | None:intergenic | 35.0% | |
| CCAATTATATTTGGATGGGT+TGG | + | chr6.2:72779543-72779562 | MS.gene79788:intron | 35.0% | |
| CCATCCAAATATAATTGGCA+TGG | - | chr6.2:72779541-72779560 | None:intergenic | 35.0% | |
| CCATGCCAATTATATTTGGA+TGG | + | chr6.2:72779538-72779557 | MS.gene79788:intron | 35.0% | |
| CCTTCAGAAATATGCAAGTT+TGG | - | chr6.2:72781217-72781236 | None:intergenic | 35.0% | |
| GAGAAATCATGTTTATGGAG+AGG | - | chr6.2:72783172-72783191 | None:intergenic | 35.0% | |
| GGTCGTATTGTGGTTTATTA+AGG | + | chr6.2:72779942-72779961 | MS.gene79788:intron | 35.0% | |
| TACATCTTACTAATTTGGGG+TGG | + | chr6.2:72780165-72780184 | MS.gene79788:intron | 35.0% | |
| TAGTGGGGACATTAATAAAG+TGG | - | chr6.2:72780246-72780265 | None:intergenic | 35.0% | |
| TATCCAACGACAGTTATTGA+TGG | + | chr6.2:72782794-72782813 | MS.gene79788:intron | 35.0% | |
| TATCCAATCGTTATCATCGA+TGG | - | chr6.2:72782732-72782751 | None:intergenic | 35.0% | |
| TCTTTGTCATGCAGATTTGT+TGG | + | chr6.2:72782468-72782487 | MS.gene79788:intron | 35.0% | |
| TGCTGTTGATCAAACCAATT+TGG | + | chr6.2:72784028-72784047 | MS.gene79788:CDS | 35.0% | |
| TTCTCTTTGAATCTCCAGAT+TGG | - | chr6.2:72781719-72781738 | None:intergenic | 35.0% | |
| TTCTTGAGCAGAAACAACAA+GGG | + | chr6.2:72783028-72783047 | MS.gene79788:intron | 35.0% | |
| ! | AAACCATCGATGATAACGAT+TGG | + | chr6.2:72782726-72782745 | MS.gene79788:intron | 35.0% |
| ! | AAAGGTTGATTGATACATGC+GGG | + | chr6.2:72779388-72779407 | MS.gene79788:intron | 35.0% |
| ! | AAAGTACTAGATGTTGGTTG+TGG | + | chr6.2:72783086-72783105 | MS.gene79788:CDS | 35.0% |
| ! | ACTGACTATTGCAAAAGTGT+TGG | + | chr6.2:72783476-72783495 | MS.gene79788:CDS | 35.0% |
| ! | CAACACATGACAAACTTTTG+AGG | + | chr6.2:72779840-72779859 | MS.gene79788:intron | 35.0% |
| ! | CATTGAGAGTGCAATAAAGA+AGG | + | chr6.2:72780873-72780892 | MS.gene79788:CDS | 35.0% |
| ! | CCAAACTTGCATATTTCTGA+AGG | + | chr6.2:72781214-72781233 | MS.gene79788:CDS | 35.0% |
| ! | CCATTATTTCTCATCCTCTT+TGG | + | chr6.2:72780133-72780152 | MS.gene79788:intron | 35.0% |
| ! | CTTTTCTTTTGGTCAAGAGA+CGG | - | chr6.2:72780568-72780587 | None:intergenic | 35.0% |
| ! | GGAACCAAGATTTTACACTA+AGG | + | chr6.2:72781761-72781780 | MS.gene79788:CDS | 35.0% |
| ! | GTAATTAAAAGTGTACCTCC+AGG | - | chr6.2:72783458-72783477 | None:intergenic | 35.0% |
| ! | TAGTGTTGAGTATAACCACA+AGG | + | chr6.2:72782544-72782563 | MS.gene79788:CDS | 35.0% |
| ! | TTAGCTTGATTCGCAAAAGT+GGG | + | chr6.2:72782689-72782708 | MS.gene79788:intron | 35.0% |
| ! | TTTTATAAGTGGTTGAAGCC+TGG | + | chr6.2:72783437-72783456 | MS.gene79788:CDS | 35.0% |
| !! | ACATCTAGTACTTTTTGACC+TGG | - | chr6.2:72783080-72783099 | None:intergenic | 35.0% |
| !! | AGGTTGTCATCGACTTAATT+TGG | + | chr6.2:72781848-72781867 | MS.gene79788:intron | 35.0% |
| !! | ATGAAGCATTGAATCAGAGA+CGG | - | chr6.2:72781037-72781056 | None:intergenic | 35.0% |
| !! | CTATTTTGAACCAGCCTAAA+CGG | + | chr6.2:72779697-72779716 | MS.gene79788:intron | 35.0% |
| !! | GGCTGAAAATTTTGATGTTG+AGG | + | chr6.2:72783133-72783152 | MS.gene79788:CDS | 35.0% |
| !! | GGTCAAAAAGTACTAGATGT+TGG | + | chr6.2:72783080-72783099 | MS.gene79788:CDS | 35.0% |
| !! | TATTTTGAACCAGCCTAAAC+GGG | + | chr6.2:72779698-72779717 | MS.gene79788:intron | 35.0% |
| !! | TCATGCAGATTTGTTGGATA+TGG | + | chr6.2:72782474-72782493 | MS.gene79788:intron | 35.0% |
| !! | TTTAGCTTGATTCGCAAAAG+TGG | + | chr6.2:72782688-72782707 | MS.gene79788:intron | 35.0% |
| !! | TTTGAGACAGCCTTTTCTTT+TGG | - | chr6.2:72780579-72780598 | None:intergenic | 35.0% |
| !!! | ACTGGAATGATTTTTTCAGG+TGG | + | chr6.2:72779109-72779128 | MS.gene79788:intron | 35.0% |
| !!! | GGAAAATCAGTTTTAGAGCT+TGG | + | chr6.2:72780784-72780803 | MS.gene79788:CDS | 35.0% |
| AAAGCCTTAACAACAAGGGA+TGG | - | chr6.2:72781595-72781614 | None:intergenic | 40.0% | |
| AAATGCCCTTGAGAACAAGA+AGG | + | chr6.2:72784160-72784179 | MS.gene79788:CDS | 40.0% | |
| AGGGAAATTGTGGCAAAGTT+AGG | + | chr6.2:72783047-72783066 | MS.gene79788:CDS | 40.0% | |
| ATGAATCACAGATACGGACA+CGG | + | chr6.2:72783715-72783734 | MS.gene79788:intron | 40.0% | |
| ATGTAGATCTGTCACCAAAG+AGG | - | chr6.2:72780150-72780169 | None:intergenic | 40.0% | |
| CATGTATCTTTCGGATGAAG+AGG | + | chr6.2:72781270-72781289 | MS.gene79788:CDS | 40.0% | |
| CGTCTCTTGACCAAAAGAAA+AGG | + | chr6.2:72780566-72780585 | MS.gene79788:intron | 40.0% | |
| CTACTACGGCATAGAATATC+CGG | + | chr6.2:72781309-72781328 | MS.gene79788:intron | 40.0% | |
| CTTCGTTAGGTTCATGTAGT+GGG | - | chr6.2:72780262-72780281 | None:intergenic | 40.0% | |
| GAACCATCAATAACTGTCGT+TGG | - | chr6.2:72782800-72782819 | None:intergenic | 40.0% | |
| GAGTGTGTGACAAACCAAAT+TGG | - | chr6.2:72784045-72784064 | None:intergenic | 40.0% | |
| GTGGGGACATTAATAAAGTG+GGG | - | chr6.2:72780244-72780263 | None:intergenic | 40.0% | |
| TAGCTGAAAGGATGGTCAAA+TGG | + | chr6.2:72781649-72781668 | MS.gene79788:CDS | 40.0% | |
| TCCTTTGAGCTTTCTCTTGT+GGG | + | chr6.2:72782240-72782259 | MS.gene79788:CDS | 40.0% | |
| TCTCTCTTCTTTGTCGAGAT+GGG | - | chr6.2:72779224-72779243 | None:intergenic | 40.0% | |
| TCTTTGAATCTCCAGATTGG+TGG | - | chr6.2:72781716-72781735 | None:intergenic | 40.0% | |
| TGAGCTGACGATTATGTCAA+TGG | + | chr6.2:72782028-72782047 | MS.gene79788:intron | 40.0% | |
| TTCGTTAGGTTCATGTAGTG+GGG | - | chr6.2:72780261-72780280 | None:intergenic | 40.0% | |
| TTGTTGAGATGAGCTTCGTT+AGG | - | chr6.2:72780275-72780294 | None:intergenic | 40.0% | |
| ! | AGTTATTGATGGTTCACCAG+TGG | + | chr6.2:72782805-72782824 | MS.gene79788:intron | 40.0% |
| ! | CTAGATGTTGGTTGTGGTAT+TGG | + | chr6.2:72783092-72783111 | MS.gene79788:CDS | 40.0% |
| ! | GAATCTTGTTTCCACCAATC+TGG | + | chr6.2:72781702-72781721 | MS.gene79788:CDS | 40.0% |
| ! | GTAATTACATGTGTCGGTGT+CGG | + | chr6.2:72783792-72783811 | MS.gene79788:intron | 40.0% |
| ! | TAGTCAGCGTGAATGTCTTT+TGG | + | chr6.2:72780708-72780727 | MS.gene79788:intron | 40.0% |
| !! | ATTGCCATCCCTTGTTGTTA+AGG | + | chr6.2:72781588-72781607 | MS.gene79788:intron | 40.0% |
| AGAGACGGTTATGAGCTTTG+AGG | - | chr6.2:72780553-72780572 | None:intergenic | 45.0% | |
| AGTTTGATCGGCTAATCGGT+AGG | + | chr6.2:72779785-72779804 | MS.gene79788:intron | 45.0% | |
| ATCGGCTAATCGGTAGGTAT+TGG | + | chr6.2:72779791-72779810 | MS.gene79788:intron | 45.0% | |
| CGGCATAGAATATCCGGATT+TGG | + | chr6.2:72781315-72781334 | MS.gene79788:intron | 45.0% | |
| CTCCTTTGAGCTTTCTCTTG+TGG | + | chr6.2:72782239-72782258 | MS.gene79788:CDS | 45.0% | |
| CTTGGTTCCCTATAGTGAGT+TGG | - | chr6.2:72781750-72781769 | None:intergenic | 45.0% | |
| GCAAAGTTAGGACTAAAGCC+AGG | + | chr6.2:72783059-72783078 | MS.gene79788:CDS | 45.0% | |
| GCTTCGTTAGGTTCATGTAG+TGG | - | chr6.2:72780263-72780282 | None:intergenic | 45.0% | |
| GGTGAGTTTGATCGGCTAAT+CGG | + | chr6.2:72779781-72779800 | MS.gene79788:intron | 45.0% | |
| GTCTCTCTTCTTTGTCGAGA+TGG | - | chr6.2:72779225-72779244 | None:intergenic | 45.0% | |
| GTGAAGTGCAGAGAAGTTAC+TGG | + | chr6.2:72779143-72779162 | MS.gene79788:CDS | 45.0% | |
| TAGAGGGTTTCAACGGTTCT+TGG | + | chr6.2:72782520-72782539 | MS.gene79788:CDS | 45.0% | |
| TATAAGTGGTTGAAGCCTGG+AGG | + | chr6.2:72783440-72783459 | MS.gene79788:CDS | 45.0% | |
| TCACAGATGCTTGAGAATGC+TGG | + | chr6.2:72783990-72784009 | MS.gene79788:intron | 45.0% | |
| TTAGAGCTTGGAGCAGGTAT+TGG | + | chr6.2:72780796-72780815 | MS.gene79788:CDS | 45.0% | |
| TTGTCCTGTACAACAATCGG+TGG | + | chr6.2:72779877-72779896 | MS.gene79788:intron | 45.0% | |
| ! | ACTGAATTGGCTCAGAAAGC+TGG | + | chr6.2:72780829-72780848 | MS.gene79788:CDS | 45.0% |
| ! | CTGAATTGGCTCAGAAAGCT+GGG | + | chr6.2:72780830-72780849 | MS.gene79788:CDS | 45.0% |
| ! | GATGTTGGTTGTGGTATTGG+AGG | + | chr6.2:72783095-72783114 | MS.gene79788:CDS | 45.0% |
| ! | TGGAGGTGGTGACTTTTACA+TGG | + | chr6.2:72783112-72783131 | MS.gene79788:CDS | 45.0% |
| ! | TTGTCCACCGATTGTTGTAC+AGG | - | chr6.2:72779884-72779903 | None:intergenic | 45.0% |
| !!! | TCAGTTTTAGAGCTTGGAGC+AGG | + | chr6.2:72780790-72780809 | MS.gene79788:CDS | 45.0% |
| !!! | TTCTTTTATTATTTTTTTTT+TGG | + | chr6.2:72782334-72782353 | MS.gene79788:intron | 5.0% |
| AATTGGATGCCCGTTTAGGC+TGG | - | chr6.2:72779710-72779729 | None:intergenic | 50.0% | |
| ATCTGACGGTCCAGATGTGT+TGG | - | chr6.2:72781371-72781390 | None:intergenic | 50.0% | |
| CTCTTCTTTGTCGAGATGGG+AGG | - | chr6.2:72779221-72779240 | None:intergenic | 50.0% | |
| GCCCACAAGAGAAAGCTCAA+AGG | - | chr6.2:72782244-72782263 | None:intergenic | 50.0% | |
| TTCGAGTGAACGTGATCCAC+TGG | - | chr6.2:72782824-72782843 | None:intergenic | 50.0% | |
| TTTGTGAGCACAGGAGGACT+TGG | + | chr6.2:72782602-72782621 | MS.gene79788:CDS | 50.0% | |
| ! | CTTGTGGGCTGCAAATGCAT+TGG | + | chr6.2:72782255-72782274 | MS.gene79788:CDS | 50.0% |
| ! | GTTGGTTGTGGTATTGGAGG+TGG | + | chr6.2:72783098-72783117 | MS.gene79788:CDS | 50.0% |
| ! | TTGATTCGCAAAAGTGGGCG+TGG | + | chr6.2:72782694-72782713 | MS.gene79788:intron | 50.0% |
| ACTGGGACACGCCTAATTCG+AGG | + | chr6.2:72783828-72783847 | MS.gene79788:intron | 55.0% | |
| CAAAAGTGGGCGTGGTTCTC+TGG | + | chr6.2:72782702-72782721 | MS.gene79788:intron | 55.0% | |
| GCACGGACACTCCTCGAATT+AGG | - | chr6.2:72783842-72783861 | None:intergenic | 55.0% | |
| TCGGACACGACACTGACACT+GGG | + | chr6.2:72783811-72783830 | MS.gene79788:intron | 55.0% | |
| ! | AGCTGGGCAATTGCTTGCTG+TGG | + | chr6.2:72780846-72780865 | MS.gene79788:CDS | 55.0% |
| ! | CAAGGCTTTGTGAGCACAGG+AGG | + | chr6.2:72782596-72782615 | MS.gene79788:CDS | 55.0% |
| ! | GGTCAAGGCTTTGTGAGCAC+AGG | + | chr6.2:72782593-72782612 | MS.gene79788:CDS | 55.0% |
| ! | TTTGTCGAGATGGGAGGCGT+TGG | - | chr6.2:72779215-72779234 | None:intergenic | 55.0% |
| GTCGGACACGACACTGACAC+TGG | + | chr6.2:72783810-72783829 | MS.gene79788:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 72778910 | 72784655 | 72778910 | ID=MS.gene79788 |
| chr6.2 | mRNA | 72778910 | 72784655 | 72778910 | ID=MS.gene79788.t1;Parent=MS.gene79788 |
| chr6.2 | exon | 72778910 | 72778937 | 72778910 | ID=MS.gene79788.t1.exon1;Parent=MS.gene79788.t1 |
| chr6.2 | CDS | 72778910 | 72778937 | 72778910 | ID=cds.MS.gene79788.t1;Parent=MS.gene79788.t1 |
| chr6.2 | exon | 72779128 | 72779249 | 72779128 | ID=MS.gene79788.t1.exon2;Parent=MS.gene79788.t1 |
| chr6.2 | CDS | 72779128 | 72779249 | 72779128 | ID=cds.MS.gene79788.t1;Parent=MS.gene79788.t1 |
| chr6.2 | exon | 72780757 | 72780894 | 72780757 | ID=MS.gene79788.t1.exon3;Parent=MS.gene79788.t1 |
| chr6.2 | CDS | 72780757 | 72780894 | 72780757 | ID=cds.MS.gene79788.t1;Parent=MS.gene79788.t1 |
| chr6.2 | exon | 72781154 | 72781291 | 72781154 | ID=MS.gene79788.t1.exon4;Parent=MS.gene79788.t1 |
| chr6.2 | CDS | 72781154 | 72781291 | 72781154 | ID=cds.MS.gene79788.t1;Parent=MS.gene79788.t1 |
| chr6.2 | exon | 72781639 | 72781782 | 72781639 | ID=MS.gene79788.t1.exon5;Parent=MS.gene79788.t1 |
| chr6.2 | CDS | 72781639 | 72781782 | 72781639 | ID=cds.MS.gene79788.t1;Parent=MS.gene79788.t1 |
| chr6.2 | exon | 72782201 | 72782311 | 72782201 | ID=MS.gene79788.t1.exon6;Parent=MS.gene79788.t1 |
| chr6.2 | CDS | 72782201 | 72782311 | 72782201 | ID=cds.MS.gene79788.t1;Parent=MS.gene79788.t1 |
| chr6.2 | exon | 72782482 | 72782623 | 72782482 | ID=MS.gene79788.t1.exon7;Parent=MS.gene79788.t1 |
| chr6.2 | CDS | 72782482 | 72782623 | 72782482 | ID=cds.MS.gene79788.t1;Parent=MS.gene79788.t1 |
| chr6.2 | exon | 72783039 | 72783319 | 72783039 | ID=MS.gene79788.t1.exon8;Parent=MS.gene79788.t1 |
| chr6.2 | CDS | 72783039 | 72783319 | 72783039 | ID=cds.MS.gene79788.t1;Parent=MS.gene79788.t1 |
| chr6.2 | exon | 72783413 | 72783574 | 72783413 | ID=MS.gene79788.t1.exon9;Parent=MS.gene79788.t1 |
| chr6.2 | CDS | 72783413 | 72783574 | 72783413 | ID=cds.MS.gene79788.t1;Parent=MS.gene79788.t1 |
| chr6.2 | exon | 72783996 | 72784049 | 72783996 | ID=MS.gene79788.t1.exon10;Parent=MS.gene79788.t1 |
| chr6.2 | CDS | 72783996 | 72784049 | 72783996 | ID=cds.MS.gene79788.t1;Parent=MS.gene79788.t1 |
| chr6.2 | exon | 72784134 | 72784208 | 72784134 | ID=MS.gene79788.t1.exon11;Parent=MS.gene79788.t1 |
| chr6.2 | CDS | 72784134 | 72784208 | 72784134 | ID=cds.MS.gene79788.t1;Parent=MS.gene79788.t1 |
| chr6.2 | exon | 72784644 | 72784655 | 72784644 | ID=MS.gene79788.t1.exon12;Parent=MS.gene79788.t1 |
| chr6.2 | CDS | 72784644 | 72784655 | 72784644 | ID=cds.MS.gene79788.t1;Parent=MS.gene79788.t1 |
| Gene Sequence |
| Protein sequence |
