AlfalfaGEDB | MS.gene80560

M. sativa cultivar XinJiangDaYe / MS.gene80560

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF13499.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene80560.t1	XP_003609145.1	96.6	148	5	0	1	148	21	168	2.30E-50	208.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene80560.t1	Q6L5F4	68.3	101	31	1	1	100	35	135	1.0e-30	134.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene80560.t1	G7JT20	96.6	148	5	0	1	148	21	168	1.7e-50	208.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene05240	MS.gene80560	0.812693	3.73E-51	-1.69E-46
MS.gene052494	MS.gene80560	0.828159	1.05E-54	-1.69E-46
MS.gene053097	MS.gene80560	0.808018	3.81E-50	-1.69E-46
MS.gene054277	MS.gene80560	0.805518	1.28E-49	-1.69E-46
MS.gene05470	MS.gene80560	-0.810644	1.04E-50	-1.69E-46
MS.gene061038	MS.gene80560	0.812926	3.32E-51	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene80560.t1	MTR_4g112460	96.622	148	5	0	1	148	21	168	7.53e-103	291
MS.gene80560.t1	MTR_8g069915	72.263	137	38	0	1	137	22	158	4.79e-70	208
MS.gene80560.t1	MTR_8g066630	52.632	133	62	1	2	133	28	160	2.82e-43	140
MS.gene80560.t1	MTR_1g076650	43.411	129	65	2	2	127	23	146	2.76e-31	109
MS.gene80560.t1	MTR_1g076650	37.778	90	53	1	61	147	4	93	1.16e-12	62.0
MS.gene80560.t1	MTR_7g087610	43.651	126	69	1	2	127	23	146	5.20e-31	108
MS.gene80560.t1	MTR_7g087610	47.619	63	33	0	71	133	17	79	9.80e-13	62.0
MS.gene80560.t1	MTR_5g088320	42.857	126	70	1	2	127	23	146	3.08e-30	107
MS.gene80560.t1	MTR_5g088320	47.619	63	33	0	71	133	17	79	8.91e-13	62.0
MS.gene80560.t1	MTR_6g025320	42.857	126	70	1	2	127	23	146	3.44e-30	107
MS.gene80560.t1	MTR_6g025320	47.619	63	33	0	71	133	17	79	9.10e-13	62.0
MS.gene80560.t1	MTR_1g041285	42.063	126	71	1	2	127	23	146	1.27e-28	103
MS.gene80560.t1	MTR_1g041285	43.421	76	39	2	58	130	2	76	1.98e-12	61.2
MS.gene80560.t1	MTR_0168s0120	42.857	112	62	1	16	127	1	110	4.89e-26	95.5
MS.gene80560.t1	MTR_6g025320	42.857	112	62	1	16	127	1	110	4.89e-26	95.5
MS.gene80560.t1	MTR_1g071150	42.063	126	70	2	2	127	23	145	1.91e-25	94.7
MS.gene80560.t1	MTR_7g115040	34.921	126	80	1	2	127	23	146	7.21e-23	88.2
MS.gene80560.t1	MTR_3g055570	36.641	131	66	1	2	132	63	176	1.44e-19	80.5
MS.gene80560.t1	MTR_1g026190	33.582	134	81	3	2	133	398	525	1.82e-17	78.2
MS.gene80560.t1	MTR_1g046950	30.952	126	87	0	4	129	17	142	3.93e-17	73.2
MS.gene80560.t1	MTR_5g009830	35.294	136	80	4	2	135	382	511	4.11e-17	77.4
MS.gene80560.t1	MTR_8g107110	33.871	124	79	2	4	127	37	157	1.04e-16	72.8
MS.gene80560.t1	MTR_3g055510	42.466	73	42	0	61	133	67	139	1.49e-16	71.6
MS.gene80560.t1	MTR_3g067610	31.008	129	83	2	2	130	16	138	3.24e-16	70.9
MS.gene80560.t1	MTR_5g092810	37.405	131	72	4	1	127	405	529	4.07e-16	74.3
MS.gene80560.t1	MTR_4g067270	32.857	140	84	3	2	136	16	150	6.04e-16	70.5
MS.gene80560.t1	MTR_0028s0170	33.594	128	81	3	2	129	394	517	9.89e-16	73.2
MS.gene80560.t1	MTR_7g106710	32.331	133	85	3	2	134	451	578	1.02e-15	73.2
MS.gene80560.t1	MTR_8g105230	32.520	123	81	1	1	123	46	166	1.21e-15	70.5
MS.gene80560.t1	MTR_8g105230	55.556	54	24	0	70	123	40	93	1.40e-11	59.7
MS.gene80560.t1	MTR_3g051770	34.266	143	85	3	2	138	399	538	1.24e-15	73.2
MS.gene80560.t1	MTR_5g079340	29.688	128	83	2	4	129	17	139	1.39e-15	69.3
MS.gene80560.t1	MTR_1g032070	31.496	127	85	1	1	127	56	180	1.69e-15	70.5
MS.gene80560.t1	MTR_1g032070	47.692	65	34	0	65	129	45	109	1.53e-12	62.4
MS.gene80560.t1	MTR_8g099095	34.815	135	80	4	2	134	382	510	2.00e-15	72.4
MS.gene80560.t1	MTR_4g132070	36.719	128	73	3	2	127	407	528	2.13e-15	72.4
MS.gene80560.t1	MTR_3g055585	34.400	125	65	1	2	126	63	170	2.34e-15	69.7
MS.gene80560.t1	MTR_7g074020	30.769	143	87	4	2	142	39	171	4.53e-15	68.6
MS.gene80560.t1	MTR_4g086260	29.457	129	87	1	2	130	68	192	5.12e-15	68.9
MS.gene80560.t1	MTR_5g027000	32.540	126	83	1	2	127	33	156	8.23e-15	67.8
MS.gene80560.t1	MTR_1g096490	31.111	135	88	3	2	136	346	475	1.03e-14	70.5
MS.gene80560.t1	MTR_5g011850	31.746	126	82	2	2	127	23	144	1.14e-14	67.0
MS.gene80560.t1	MTR_8g095440	32.812	128	81	3	2	129	346	468	1.82e-14	69.7
MS.gene80560.t1	MTR_7g089760	31.061	132	87	2	2	131	16	145	1.97e-14	66.6
MS.gene80560.t1	MTR_1g047100	30.400	125	86	1	4	128	17	140	3.08e-14	65.9
MS.gene80560.t1	MTR_5g089320	32.031	128	83	3	2	129	384	507	4.09e-14	68.6
MS.gene80560.t1	MTR_2g098890	33.333	132	80	3	2	128	75	203	5.46e-14	66.6
MS.gene80560.t1	MTR_3g098090	31.250	128	83	3	2	129	348	470	5.62e-14	68.2
MS.gene80560.t1	MTR_4g107490	33.858	127	79	3	2	127	389	511	6.77e-14	68.2
MS.gene80560.t1	MTR_1g030440	33.333	132	80	2	1	127	32	160	9.34e-14	65.1
MS.gene80560.t1	MTR_5g099240	30.469	128	84	3	2	129	412	534	1.25e-13	67.4
MS.gene80560.t1	MTR_5g099240	30.469	128	84	3	2	129	340	462	1.28e-13	67.4
MS.gene80560.t1	MTR_3g089090	32.540	126	82	2	2	127	16	138	1.45e-13	63.9
MS.gene80560.t1	MTR_7g068710	32.540	126	82	2	2	127	372	494	1.48e-13	67.0
MS.gene80560.t1	MTR_3g089070	32.540	126	82	2	2	127	17	139	1.55e-13	63.9
MS.gene80560.t1	MTR_1g054865	30.952	126	82	3	2	127	477	597	1.55e-13	67.0
MS.gene80560.t1	MTR_3g055520	32.787	122	65	1	2	123	63	167	1.80e-13	64.7
MS.gene80560.t1	MTR_6g023460	29.365	126	86	1	2	127	19	141	2.89e-13	63.2
MS.gene80560.t1	MTR_3g098070	30.469	128	84	3	2	129	345	467	3.34e-13	65.9
MS.gene80560.t1	MTR_6g007613	29.545	132	89	3	2	131	38	167	3.60e-13	63.5
MS.gene80560.t1	MTR_5g017510	31.008	129	81	4	2	127	59	182	4.12e-13	63.9
MS.gene80560.t1	MTR_5g017560	31.008	129	81	4	2	127	59	182	4.12e-13	63.9
MS.gene80560.t1	MTR_1g041150	28.148	135	92	2	2	136	434	563	5.43e-13	65.5
MS.gene80560.t1	MTR_4g103655	30.952	126	84	1	2	127	17	139	6.00e-13	62.4
MS.gene80560.t1	MTR_1g055255	29.323	133	89	3	2	134	440	567	6.17e-13	65.5
MS.gene80560.t1	MTR_3g055480	36.250	80	44	2	53	129	33	108	7.30e-13	61.6
MS.gene80560.t1	MTR_5g017550	28.571	126	87	1	2	127	59	181	1.14e-12	62.8
MS.gene80560.t1	MTR_7g090450	31.008	129	86	3	2	127	84	212	1.81e-12	62.8
MS.gene80560.t1	MTR_7g074020	32.456	114	73	3	2	113	39	150	1.94e-12	61.6
MS.gene80560.t1	MTR_4g103650	30.159	126	85	1	2	127	13	135	3.60e-12	60.1
MS.gene80560.t1	MTR_6g079570	27.778	126	87	2	4	128	39	161	3.90e-12	60.8
MS.gene80560.t1	MTR_4g115170	28.947	152	92	2	2	137	75	226	5.62e-12	61.2
MS.gene80560.t1	MTR_7g075040	30.714	140	87	5	2	133	58	195	2.18e-11	59.3
MS.gene80560.t1	MTR_4g103630	30.159	126	85	2	2	127	17	139	3.72e-11	57.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene80560.t1	AT1G18530	75.912	137	33	0	1	137	17	153	4.29e-73	216
MS.gene80560.t1	AT3G25600	70.073	137	41	0	1	137	22	158	2.47e-67	201
MS.gene80560.t1	AT1G32250	50.000	136	64	1	2	133	27	162	1.50e-39	131
MS.gene80560.t1	AT3G03000	52.273	132	62	1	2	133	31	161	2.39e-34	118
MS.gene80560.t1	AT5G37780	43.651	126	69	1	2	127	23	146	1.46e-30	108
MS.gene80560.t1	AT5G37780	46.032	63	34	0	71	133	17	79	3.27e-12	60.8
MS.gene80560.t1	AT1G66410	43.651	126	69	1	2	127	23	146	1.46e-30	108
MS.gene80560.t1	AT1G66410	46.032	63	34	0	71	133	17	79	3.27e-12	60.8
MS.gene80560.t1	AT3G43810	42.857	126	70	1	2	127	23	146	3.60e-30	107
MS.gene80560.t1	AT3G43810	47.619	63	33	0	71	133	17	79	9.53e-13	62.0
MS.gene80560.t1	AT3G43810	42.857	126	70	1	2	127	23	146	1.09e-29	107
MS.gene80560.t1	AT3G43810	47.619	63	33	0	71	133	17	79	1.50e-12	62.8
MS.gene80560.t1	AT3G56800	42.063	126	71	1	2	127	23	146	1.11e-29	105
MS.gene80560.t1	AT3G56800	47.619	63	33	0	71	133	17	79	8.67e-13	62.4
MS.gene80560.t1	AT2G27030	42.063	126	71	1	2	127	23	146	1.11e-29	105
MS.gene80560.t1	AT2G27030	47.619	63	33	0	71	133	17	79	8.67e-13	62.4
MS.gene80560.t1	AT2G41110	42.063	126	71	1	2	127	23	146	1.11e-29	105
MS.gene80560.t1	AT2G41110	47.619	63	33	0	71	133	17	79	8.67e-13	62.4
MS.gene80560.t1	AT5G21274	42.063	126	71	1	2	127	23	146	1.27e-29	105
MS.gene80560.t1	AT5G21274	47.619	63	33	0	71	133	17	79	9.53e-13	62.0
MS.gene80560.t1	AT2G27030	42.063	126	71	1	2	127	23	146	1.72e-29	106
MS.gene80560.t1	AT2G27030	46.875	64	34	0	70	133	16	79	2.19e-12	62.0
MS.gene80560.t1	AT4G14640	41.860	129	67	2	2	127	24	147	1.76e-29	105
MS.gene80560.t1	AT3G22930	43.651	126	69	2	2	127	46	169	1.89e-29	105
MS.gene80560.t1	AT3G22930	44.444	72	37	1	62	130	28	99	2.60e-11	58.9
MS.gene80560.t1	AT5G37780	43.200	125	69	1	3	127	50	172	4.53e-29	105
MS.gene80560.t1	AT1G66410	43.089	123	68	1	5	127	36	156	8.37e-29	103
MS.gene80560.t1	AT5G37780	43.089	123	68	1	5	127	13	133	9.42e-29	103
MS.gene80560.t1	AT5G37780	43.089	123	68	1	5	127	41	161	1.25e-28	103
MS.gene80560.t1	AT4G14640	41.270	126	66	2	5	127	9	129	4.72e-28	101
MS.gene80560.t1	AT2G41110	41.463	123	70	1	5	127	38	158	9.65e-28	101
MS.gene80560.t1	AT3G51920	39.683	126	74	1	2	127	23	146	8.09e-27	98.6
MS.gene80560.t1	AT1G66410	43.750	112	61	1	16	127	1	110	2.22e-26	96.3
MS.gene80560.t1	AT1G66410	43.750	112	61	1	16	127	1	110	2.22e-26	96.3
MS.gene80560.t1	AT3G43810	42.857	112	62	1	16	127	1	110	5.12e-26	95.5
MS.gene80560.t1	AT3G43810	42.857	112	62	1	16	127	1	110	5.12e-26	95.5
MS.gene80560.t1	AT4G37010	32.061	131	87	1	1	131	37	165	1.02e-18	78.2
MS.gene80560.t1	AT4G37010	32.061	131	87	1	1	131	41	169	1.11e-18	78.2
MS.gene80560.t1	AT2G41100	32.143	140	80	2	4	128	79	218	1.58e-18	80.1
MS.gene80560.t1	AT2G41100	30.000	130	77	2	15	130	1	130	3.51e-14	68.2
MS.gene80560.t1	AT2G41100	32.143	140	80	2	4	128	79	218	1.58e-18	80.1
MS.gene80560.t1	AT2G41100	30.000	130	77	2	15	130	1	130	3.51e-14	68.2
MS.gene80560.t1	AT2G41100	32.143	140	80	2	4	128	79	218	1.58e-18	80.1
MS.gene80560.t1	AT2G41100	30.000	130	77	2	15	130	1	130	3.51e-14	68.2
MS.gene80560.t1	AT2G41100	32.143	140	80	2	4	128	114	253	2.40e-18	80.1
MS.gene80560.t1	AT2G41100	31.915	141	82	2	4	130	25	165	3.72e-18	79.3
MS.gene80560.t1	AT2G41100	32.143	140	80	2	4	128	114	253	2.40e-18	80.1
MS.gene80560.t1	AT2G41100	31.915	141	82	2	4	130	25	165	3.72e-18	79.3
MS.gene80560.t1	AT2G41090	36.290	124	74	1	4	127	25	143	8.68e-18	76.3
MS.gene80560.t1	AT1G05990	34.091	132	78	3	2	128	16	143	1.02e-16	72.4
MS.gene80560.t1	AT5G37770	31.496	127	85	1	4	128	30	156	1.36e-16	72.4
MS.gene80560.t1	AT5G37770	31.496	127	85	1	4	128	30	156	1.36e-16	72.4
MS.gene80560.t1	AT1G74740	33.858	127	79	3	2	127	375	497	1.95e-16	75.5
MS.gene80560.t1	AT3G50360	31.818	132	86	2	2	131	36	165	2.28e-16	72.0
MS.gene80560.t1	AT1G24620	33.594	128	83	1	1	128	47	172	2.53e-16	72.4
MS.gene80560.t1	AT4G03290	35.338	133	79	3	2	129	16	146	2.94e-16	71.2
MS.gene80560.t1	AT1G61950	35.878	131	74	4	1	127	412	536	3.03e-16	74.7
MS.gene80560.t1	AT1G76040	34.307	137	80	4	1	133	186	316	4.04e-16	73.9
MS.gene80560.t1	AT1G76040	34.307	137	80	4	1	133	186	316	4.04e-16	73.9
MS.gene80560.t1	AT1G35670	33.594	128	80	3	2	129	342	464	4.13e-16	74.3
MS.gene80560.t1	AT1G76040	34.307	137	80	4	1	133	424	554	8.54e-16	73.6
MS.gene80560.t1	AT3G22930	42.529	87	48	2	2	88	46	130	1.04e-15	69.3
MS.gene80560.t1	AT3G22930	45.070	71	36	1	62	129	28	98	1.11e-11	58.9
MS.gene80560.t1	AT4G12860	32.812	128	82	2	2	127	16	141	1.65e-15	69.3
MS.gene80560.t1	AT4G38230	32.031	128	82	3	2	129	196	318	1.74e-15	72.4
MS.gene80560.t1	AT4G38230	32.031	128	82	3	2	129	340	462	2.21e-15	72.4
MS.gene80560.t1	AT4G38230	32.031	128	82	3	2	129	340	462	2.21e-15	72.4
MS.gene80560.t1	AT4G38230	32.031	128	82	3	2	129	370	492	2.24e-15	72.4
MS.gene80560.t1	AT2G41100	30.952	126	72	2	18	128	3	128	2.79e-15	69.7
MS.gene80560.t1	AT1G18210	28.800	125	83	1	4	128	36	154	2.93e-15	69.3
MS.gene80560.t1	AT1G18210	28.800	125	83	1	4	128	36	154	2.93e-15	69.3
MS.gene80560.t1	AT2G43290	31.818	132	85	2	2	128	76	207	3.66e-15	69.7
MS.gene80560.t1	AT5G12180	32.090	134	87	2	2	135	389	518	4.27e-15	71.6
MS.gene80560.t1	AT5G17470	30.534	131	83	2	2	128	13	139	4.42e-15	68.2
MS.gene80560.t1	AT3G51850	32.540	126	82	1	2	127	370	492	4.44e-15	71.6
MS.gene80560.t1	AT4G09570	32.031	128	82	2	2	129	341	463	4.97e-15	71.2
MS.gene80560.t1	AT5G19360	31.818	132	86	2	2	133	384	511	5.92e-15	71.2
MS.gene80560.t1	AT4G14640	40.449	89	45	2	2	87	24	107	7.28e-15	67.0
MS.gene80560.t1	AT2G41410	34.328	134	85	3	2	133	81	213	1.37e-14	68.2
MS.gene80560.t1	AT4G04695	34.815	135	79	4	2	134	347	474	2.22e-14	69.3
MS.gene80560.t1	AT4G35310	31.250	128	83	3	2	129	413	535	2.84e-14	69.3
MS.gene80560.t1	AT4G35310	31.250	128	83	3	2	129	413	535	2.84e-14	69.3
MS.gene80560.t1	AT2G17290	30.469	128	84	3	2	129	401	523	3.14e-14	68.9
MS.gene80560.t1	AT2G17290	30.469	128	84	3	2	129	401	523	3.14e-14	68.9
MS.gene80560.t1	AT4G04720	35.338	133	77	4	2	132	395	520	4.34e-14	68.6
MS.gene80560.t1	AT4G04720	35.338	133	77	4	2	132	395	520	4.34e-14	68.6
MS.gene80560.t1	AT2G41100	50.000	58	29	0	71	128	17	74	5.20e-14	65.5
MS.gene80560.t1	AT5G23580	32.031	128	82	3	2	129	338	460	6.15e-14	68.2
MS.gene80560.t1	AT1G66400	30.159	126	88	0	2	127	26	151	7.48e-14	65.1
MS.gene80560.t1	AT1G12310	29.365	126	85	2	2	127	24	145	1.02e-13	64.7
MS.gene80560.t1	AT4G23650	33.824	136	82	4	2	135	394	523	1.14e-13	67.4
MS.gene80560.t1	AT1G50700	32.812	128	78	3	2	127	389	510	1.15e-13	67.4
MS.gene80560.t1	AT4G04700	33.588	131	83	2	2	132	347	473	1.28e-13	67.4
MS.gene80560.t1	AT3G10190	29.688	128	85	3	2	127	81	205	1.31e-13	65.5
MS.gene80560.t1	AT4G04710	35.659	129	75	3	1	127	347	469	1.45e-13	67.0
MS.gene80560.t1	AT4G04710	35.659	129	75	3	1	127	333	455	1.45e-13	67.0
MS.gene80560.t1	AT4G04710	35.659	129	75	3	1	127	360	482	1.53e-13	67.0
MS.gene80560.t1	AT2G15680	26.562	128	90	1	1	128	60	183	1.62e-13	65.1
MS.gene80560.t1	AT1G62820	28.571	126	86	2	2	127	24	145	2.29e-13	63.5
MS.gene80560.t1	AT4G21940	34.351	131	76	4	1	127	414	538	3.19e-13	66.2
MS.gene80560.t1	AT4G21940	34.351	131	76	4	1	127	414	538	3.36e-13	66.2
MS.gene80560.t1	AT3G20410	33.594	128	77	3	2	127	407	528	4.01e-13	65.9
MS.gene80560.t1	AT3G20410	33.594	128	77	3	2	127	407	528	4.01e-13	65.9
MS.gene80560.t1	AT3G59440	33.077	130	76	5	4	128	64	187	1.27e-12	62.8
MS.gene80560.t1	AT1G18890	33.071	127	80	3	2	127	379	501	1.58e-12	64.3
MS.gene80560.t1	AT2G36180	26.772	127	92	1	2	127	11	137	1.68e-12	61.2
MS.gene80560.t1	AT2G41860	33.077	130	80	4	1	127	367	492	1.74e-12	63.9
MS.gene80560.t1	AT2G41860	33.077	130	80	4	1	127	367	492	1.74e-12	63.9
MS.gene80560.t1	AT5G04870	27.692	130	89	3	2	131	466	590	3.58e-12	63.2
MS.gene80560.t1	AT3G10660	28.462	130	88	3	2	131	502	626	4.02e-12	63.2
MS.gene80560.t1	AT3G10660	28.462	130	88	3	2	131	502	626	4.02e-12	63.2
MS.gene80560.t1	AT4G04710	35.115	131	75	4	1	127	360	484	5.03e-12	62.8
MS.gene80560.t1	AT4G04740	33.588	131	77	4	1	127	381	505	7.82e-12	62.0
MS.gene80560.t1	AT4G04740	33.588	131	77	4	1	127	381	505	7.82e-12	62.0
MS.gene80560.t1	AT4G04740	33.588	131	77	4	1	127	381	505	7.82e-12	62.0
MS.gene80560.t1	AT4G04740	33.588	131	77	4	1	127	381	505	7.82e-12	62.0
MS.gene80560.t1	AT4G04740	33.588	131	77	4	1	127	381	505	7.82e-12	62.0
MS.gene80560.t1	AT4G04740	33.588	131	77	4	1	127	381	505	7.82e-12	62.0
MS.gene80560.t1	AT1G73630	25.600	125	87	2	4	128	33	151	1.29e-11	59.3
MS.gene80560.t1	AT2G38910	29.412	136	91	3	2	137	450	580	1.36e-11	61.6
MS.gene80560.t1	AT2G31500	33.577	137	82	6	2	134	382	513	5.75e-11	59.7
MS.gene80560.t1	AT3G07490	33.333	141	82	5	2	136	16	150	6.81e-11	57.4

Find 28 sgRNAs with CRISPR-Local

Find 29 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCAAATCTTATTAGCCAAAA+TGG	0.199928	8.1:-14782290	MS.gene80560:CDS
GTTTCTGTTTGAATCCATTT+TGG	0.223500	8.1:+14782276	None:intergenic
TGCATTCATGTTCGGCATTA+TGG	0.231984	8.1:+14782222	None:intergenic
CGCTCTGCTTCTGATTTATT+AGG	0.273541	8.1:-14781989	MS.gene80560:CDS
CTGCTAGTTCTAACATTGTT+AGG	0.317076	8.1:+14782356	None:intergenic
ATTCATTTCAGCAGCTGAAT+TGG	0.352081	8.1:-14782134	MS.gene80560:CDS
GATGATTAGAGAAGCTGATA+TGG	0.368224	8.1:-14782059	MS.gene80560:CDS
GGGTCAGCCACTTACATATA+AGG	0.372815	8.1:-14782092	MS.gene80560:CDS
TCGTTAGGGCTAAAGCCTTC+AGG	0.374738	8.1:-14782322	MS.gene80560:CDS
GCAGCACTTATTCGTTCGTT+AGG	0.382441	8.1:-14782337	MS.gene80560:CDS
TAGTGAGTTTGCTACAATCA+TGG	0.443483	8.1:-14782014	MS.gene80560:CDS
CAGCACTTATTCGTTCGTTA+GGG	0.460217	8.1:-14782336	MS.gene80560:CDS
ATTTCAGCAGCTGAATTGGC+TGG	0.463901	8.1:-14782130	MS.gene80560:CDS
AATACTTCTGCATTCATGTT+CGG	0.467152	8.1:+14782214	None:intergenic
TGCTTCGATCGCGATGGGAA+TGG	0.468041	8.1:-14782157	MS.gene80560:CDS
GTGAATCAAGAACAACTCAT+AGG	0.474821	8.1:-14782190	MS.gene80560:CDS
ATAAGCTCCTTATATGTAAG+TGG	0.483364	8.1:+14782085	None:intergenic
AGCTGAATTGGCTGGAGCAA+TGG	0.497837	8.1:-14782122	MS.gene80560:CDS
GGATTCAAACAGAAACGGTT+CGG	0.505680	8.1:-14782269	MS.gene80560:CDS
TCAAATGCTTCGATCGCGAT+GGG	0.540427	8.1:-14782162	MS.gene80560:CDS
TTCAAATGCTTCGATCGCGA+TGG	0.556995	8.1:-14782163	MS.gene80560:CDS
AAAATGGATTCAAACAGAAA+CGG	0.570631	8.1:-14782274	MS.gene80560:CDS
TAACATTGTTAGGCTGCCAT+CGG	0.573272	8.1:+14782366	None:intergenic
ATTTGAACTTCGTCACCTGA+AGG	0.579483	8.1:+14782307	None:intergenic
GAACATGAATGCAGAAGTAT+TGG	0.581543	8.1:-14782212	MS.gene80560:CDS
CGATTCGACATGGATTCCGA+TGG	0.648654	8.1:-14782382	None:intergenic
ATTAGAGAAGCTGATATGGA+TGG	0.660029	8.1:-14782055	MS.gene80560:CDS
GAAGCTGATATGGATGGTGA+TGG	0.666205	8.1:-14782049	MS.gene80560:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	TCAAATCTTATTAGCCAAAA+TGG	-	chr8.1:14782029-14782048	MS.gene80560:CDS	25.0%
!!	AAAATGGATTCAAACAGAAA+CGG	-	chr8.1:14782045-14782064	MS.gene80560:CDS	25.0%
	AATACTTCTGCATTCATGTT+CGG	+	chr8.1:14782108-14782127	None:intergenic	30.0%
	ATAAGCTCCTTATATGTAAG+TGG	+	chr8.1:14782237-14782256	None:intergenic	30.0%
!	GTTTCTGTTTGAATCCATTT+TGG	+	chr8.1:14782046-14782065	None:intergenic	30.0%
	ATTAGAGAAGCTGATATGGA+TGG	-	chr8.1:14782264-14782283	MS.gene80560:CDS	35.0%
	ATTCATTTCAGCAGCTGAAT+TGG	-	chr8.1:14782185-14782204	MS.gene80560:CDS	35.0%
	GATGATTAGAGAAGCTGATA+TGG	-	chr8.1:14782260-14782279	MS.gene80560:CDS	35.0%
	GTGAATCAAGAACAACTCAT+AGG	-	chr8.1:14782129-14782148	MS.gene80560:CDS	35.0%
!	GAACATGAATGCAGAAGTAT+TGG	-	chr8.1:14782107-14782126	MS.gene80560:CDS	35.0%
!!	CTGCTAGTTCTAACATTGTT+AGG	+	chr8.1:14781966-14781985	None:intergenic	35.0%
!!	TAGTGAGTTTGCTACAATCA+TGG	-	chr8.1:14782305-14782324	MS.gene80560:CDS	35.0%
	ATTTGAACTTCGTCACCTGA+AGG	+	chr8.1:14782015-14782034	None:intergenic	40.0%
	CAGCACTTATTCGTTCGTTA+GGG	-	chr8.1:14781983-14782002	MS.gene80560:CDS	40.0%
	CGCTCTGCTTCTGATTTATT+AGG	-	chr8.1:14782330-14782349	MS.gene80560:CDS	40.0%
	GGATTCAAACAGAAACGGTT+CGG	-	chr8.1:14782050-14782069	MS.gene80560:CDS	40.0%
	TAACATTGTTAGGCTGCCAT+CGG	+	chr8.1:14781956-14781975	None:intergenic	40.0%
	TGCATTCATGTTCGGCATTA+TGG	+	chr8.1:14782100-14782119	None:intergenic	40.0%
	ATTTCAGCAGCTGAATTGGC+TGG	-	chr8.1:14782189-14782208	MS.gene80560:CDS	45.0%
	GAAGCTGATATGGATGGTGA+TGG	-	chr8.1:14782270-14782289	MS.gene80560:CDS	45.0%
	GCAGCACTTATTCGTTCGTT+AGG	-	chr8.1:14781982-14782001	MS.gene80560:CDS	45.0%
	GCTGGAGCAATGGCAAAAAT+GGG	-	chr8.1:14782207-14782226	MS.gene80560:CDS	45.0%
	GGGTCAGCCACTTACATATA+AGG	-	chr8.1:14782227-14782246	MS.gene80560:CDS	45.0%
	TCAAATGCTTCGATCGCGAT+GGG	-	chr8.1:14782157-14782176	MS.gene80560:CDS	45.0%
	TTCAAATGCTTCGATCGCGA+TGG	-	chr8.1:14782156-14782175	MS.gene80560:CDS	45.0%
	AGCTGAATTGGCTGGAGCAA+TGG	-	chr8.1:14782197-14782216	MS.gene80560:CDS	50.0%
	GGCTGGAGCAATGGCAAAAA+TGG	-	chr8.1:14782206-14782225	MS.gene80560:CDS	50.0%
	TCGTTAGGGCTAAAGCCTTC+AGG	-	chr8.1:14781997-14782016	MS.gene80560:CDS	50.0%
	TGCTTCGATCGCGATGGGAA+TGG	-	chr8.1:14782162-14782181	MS.gene80560:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.1	gene	14781946	14782395	14781946	ID=MS.gene80560
chr8.1	mRNA	14781946	14782395	14781946	ID=MS.gene80560.t1;Parent=MS.gene80560
chr8.1	exon	14781946	14782395	14781946	ID=MS.gene80560.t1.exon1;Parent=MS.gene80560.t1
chr8.1	CDS	14781946	14782395	14781946	ID=cds.MS.gene80560.t1;Parent=MS.gene80560.t1

Gene Sequence

>MS.gene80560

ATGGATTCCGATGGCAGCCTAACAATGTTAGAACTAGCAGCACTTATTCGTTCGTTAGGGCTAAAGCCTTCAGGTGACGAAGTTCAAATCTTATTAGCCAAAATGGATTCAAACAGAAACGGTTCGGTTGAGTTCGATGAATTAGTAGAAGCCATAATGCCGAACATGAATGCAGAAGTATTGGTGAATCAAGAACAACTCATAGGTGTGTTCAAATGCTTCGATCGCGATGGGAATGGATTCATTTCAGCAGCTGAATTGGCTGGAGCAATGGCAAAAATGGGTCAGCCACTTACATATAAGGAGCTTATTGAGATGATTAGAGAAGCTGATATGGATGGTGATGGTGTTATTAGTTTTAGTGAGTTTGCTACAATCATGGCTCGCTCTGCTTCTGATTTATTAGGAGTGTTTGAATACAGACACAAAACACATTCATTTCAATTATAA

Protein sequence

>MS.gene80560.t1

MDSDGSLTMLELAALIRSLGLKPSGDEVQILLAKMDSNRNGSVEFDELVEAIMPNMNAEVLVNQEQLIGVFKCFDRDGNGFISAAELAGAMAKMGQPLTYKELIEMIREADMDGDGVISFSEFATIMARSASDLLGVFEYRHKTHSFQL