Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81141.t1 | XP_013452478.1 | 95.9 | 364 | 15 | 0 | 76 | 439 | 171 | 534 | 1.50E-201 | 712.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81141.t1 | Q9P7G4 | 40.8 | 179 | 95 | 4 | 257 | 426 | 146 | 322 | 9.8e-29 | 129.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81141.t1 | A0A072UAP6 | 95.9 | 364 | 15 | 0 | 76 | 439 | 171 | 534 | 1.1e-201 | 712.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050941 | MS.gene81141 | 0.843895 | 1.06E-58 | -1.69E-46 |
| MS.gene05344 | MS.gene81141 | -0.813857 | 2.07E-51 | -1.69E-46 |
| MS.gene056787 | MS.gene81141 | 0.808862 | 2.51E-50 | -1.69E-46 |
| MS.gene058758 | MS.gene81141 | 0.808141 | 3.58E-50 | -1.69E-46 |
| MS.gene059050 | MS.gene81141 | 0.815647 | 8.31E-52 | -1.69E-46 |
| MS.gene059360 | MS.gene81141 | 0.814914 | 1.21E-51 | -1.69E-46 |
| MS.gene06010 | MS.gene81141 | 0.828412 | 9.12E-55 | -1.69E-46 |
| MS.gene060702 | MS.gene81141 | 0.806345 | 8.60E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81141.t1 | MTR_6g463380 | 94.077 | 439 | 26 | 0 | 1 | 439 | 96 | 534 | 0.0 | 858 |
| MS.gene81141.t1 | MTR_3g006860 | 92.483 | 439 | 33 | 0 | 1 | 439 | 92 | 530 | 0.0 | 839 |
| MS.gene81141.t1 | MTR_6g463380 | 93.036 | 359 | 25 | 0 | 1 | 359 | 96 | 454 | 0.0 | 699 |
| MS.gene81141.t1 | MTR_6g463380 | 93.277 | 357 | 24 | 0 | 1 | 357 | 96 | 452 | 0.0 | 696 |
| MS.gene81141.t1 | MTR_6g079410 | 49.220 | 449 | 136 | 12 | 45 | 431 | 46 | 464 | 1.06e-127 | 377 |
| MS.gene81141.t1 | MTR_6g061650 | 53.191 | 329 | 105 | 8 | 109 | 433 | 32 | 315 | 3.36e-104 | 312 |
| MS.gene81141.t1 | MTR_6g006850 | 36.025 | 322 | 156 | 7 | 122 | 436 | 29 | 307 | 1.17e-54 | 184 |
| MS.gene81141.t1 | MTR_1g014390 | 46.701 | 197 | 75 | 3 | 237 | 430 | 119 | 288 | 9.38e-49 | 168 |
| MS.gene81141.t1 | MTR_6g006710 | 33.887 | 301 | 118 | 6 | 142 | 436 | 68 | 293 | 7.97e-43 | 152 |
| MS.gene81141.t1 | MTR_1g029560 | 42.157 | 204 | 93 | 5 | 239 | 436 | 18 | 202 | 6.60e-41 | 145 |
| MS.gene81141.t1 | MTR_1g012010 | 45.833 | 120 | 62 | 1 | 240 | 359 | 124 | 240 | 1.93e-25 | 104 |
| MS.gene81141.t1 | MTR_1g012015 | 60.000 | 75 | 27 | 1 | 359 | 430 | 23 | 97 | 3.91e-24 | 96.7 |
| MS.gene81141.t1 | MTR_7g025575 | 59.091 | 88 | 29 | 2 | 358 | 439 | 13 | 99 | 7.52e-24 | 96.3 |
| MS.gene81141.t1 | MTR_6g080120 | 68.000 | 50 | 14 | 1 | 358 | 407 | 1 | 48 | 1.45e-13 | 65.9 |
| MS.gene81141.t1 | MTR_6g079950 | 41.791 | 67 | 38 | 1 | 370 | 436 | 1 | 66 | 5.95e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81141.t1 | AT5G51740 | 57.373 | 434 | 159 | 6 | 10 | 439 | 31 | 442 | 4.72e-175 | 497 |
| MS.gene81141.t1 | AT5G51740 | 57.373 | 434 | 159 | 6 | 10 | 439 | 74 | 485 | 2.27e-174 | 497 |
| MS.gene81141.t1 | AT5G51740 | 53.276 | 351 | 140 | 4 | 10 | 357 | 74 | 403 | 1.30e-128 | 378 |
Find 97 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTAAGAGGTTAGGGAAAA+TGG | 0.112500 | 6.1:+54166986 | MS.gene81141:CDS |
| ATGAGGTTCTTGATGATAAA+TGG | 0.155660 | 6.1:+54167600 | MS.gene81141:CDS |
| TGGATTGAATTGGGAGATTT+TGG | 0.167567 | 6.1:+54167685 | MS.gene81141:CDS |
| TGTCAAGGTGGTAACTTTAA+TGG | 0.209828 | 6.1:+54166942 | MS.gene81141:CDS |
| TTGAGATAAATAAGAATATT+GGG | 0.260342 | 6.1:+54167012 | MS.gene81141:CDS |
| TTTGAGATAAATAAGAATAT+TGG | 0.272846 | 6.1:+54167011 | MS.gene81141:CDS |
| AAATGCGTTCGCTTCGTATA+AGG | 0.273091 | 6.1:-54167284 | None:intergenic |
| ATCCTAACTCTCACACTTTC+AGG | 0.275058 | 6.1:-54167404 | None:intergenic |
| GCAGAGATAGCAACTATTAT+TGG | 0.296599 | 6.1:+54167797 | MS.gene81141:CDS |
| CACATTTGGATGGATTGAAT+TGG | 0.299543 | 6.1:+54167675 | MS.gene81141:CDS |
| AGCTTCTTCTCCATCTCTTT+CGG | 0.314424 | 6.1:-54167317 | None:intergenic |
| CCATCCAAATGTGACGTATA+AGG | 0.321830 | 6.1:-54167665 | None:intergenic |
| TGGTGTTGAAGGATTTCTTT+AGG | 0.322830 | 6.1:+54170597 | MS.gene81141:CDS |
| TCTTCAATTCCTAAGAGGTT+AGG | 0.330856 | 6.1:+54166978 | MS.gene81141:CDS |
| TGGGAAGATAGTCGTGTTTA+CGG | 0.331309 | 6.1:+54167748 | MS.gene81141:CDS |
| GACATAGTGTTGACAATATC+AGG | 0.345694 | 6.1:-54168266 | None:intergenic |
| ACACTTTCAGGATGCATTGC+AGG | 0.348683 | 6.1:-54167392 | None:intergenic |
| CTCATTAAAGCTAACACCTT+TGG | 0.357141 | 6.1:-54167042 | None:intergenic |
| AGGATTCTGAAACCAATTCT+TGG | 0.360608 | 6.1:-54167186 | None:intergenic |
| GTCAAGGTGGTAACTTTAAT+GGG | 0.361635 | 6.1:+54166943 | MS.gene81141:CDS |
| AACCAATTCTTGGGCCCTCT+TGG | 0.369695 | 6.1:-54167176 | None:intergenic |
| AGCCAAGAGGGCCCAAGAAT+TGG | 0.371217 | 6.1:+54167174 | MS.gene81141:CDS |
| AAGAAAACGAGCAGAATTAC+TGG | 0.372401 | 6.1:+54170516 | MS.gene81141:CDS |
| CTTCAATTCCTAAGAGGTTA+GGG | 0.379836 | 6.1:+54166979 | MS.gene81141:CDS |
| ATTGGTATAGTGGTTGGTTC+AGG | 0.382197 | 6.1:+54167221 | MS.gene81141:CDS |
| CCTAAGAGGTTAGGGAAAAT+GGG | 0.389385 | 6.1:+54166987 | MS.gene81141:CDS |
| AAGAGATGGAGAAGAAGCTT+GGG | 0.391537 | 6.1:+54167321 | MS.gene81141:CDS |
| CATCTTCTCAGCACTGTGTC+TGG | 0.400313 | 6.1:-54168189 | None:intergenic |
| GCTTCAGAAAATTCTGTGTT+TGG | 0.406389 | 6.1:+54167500 | MS.gene81141:CDS |
| CATCAAGAACCTCATCTTCC+CGG | 0.410729 | 6.1:-54167592 | None:intergenic |
| ACATTTGGATGGATTGAATT+GGG | 0.413686 | 6.1:+54167676 | MS.gene81141:CDS |
| AAGGGAAAGTTGGAGGGAAT+TGG | 0.419080 | 6.1:+54167567 | MS.gene81141:CDS |
| GCAACCTTATACGTCACATT+TGG | 0.419485 | 6.1:+54167661 | MS.gene81141:CDS |
| GGGAAGATAGTCGTGTTTAC+GGG | 0.423649 | 6.1:+54167749 | MS.gene81141:CDS |
| AGAGAAGGACATGGTGTTGA+AGG | 0.427494 | 6.1:+54170586 | MS.gene81141:CDS |
| ACTGAAAATGAAGGGAAAGT+TGG | 0.438682 | 6.1:+54167557 | MS.gene81141:CDS |
| GGATTCTGAAACCAATTCTT+GGG | 0.448277 | 6.1:-54167185 | None:intergenic |
| GTTGAAGAGAGGGTTGAGTA+AGG | 0.449933 | 6.1:+54167451 | MS.gene81141:CDS |
| GCATGTTATGATTGGTATAG+TGG | 0.453566 | 6.1:+54167211 | MS.gene81141:CDS |
| AGAATTGGTTTCAGAATCCT+AGG | 0.453587 | 6.1:+54167189 | MS.gene81141:CDS |
| ACCTAAAGTCTACGAAAAGT+TGG | 0.458356 | 6.1:+54170438 | MS.gene81141:CDS |
| TGAGGTTCTTGATGATAAAT+GGG | 0.460396 | 6.1:+54167601 | MS.gene81141:CDS |
| TTTGGTGGTGAAGGATCCTA+TGG | 0.460965 | 6.1:+54167703 | MS.gene81141:CDS |
| TATTTCGCTACTCATCCATC+TGG | 0.461058 | 6.1:+54170493 | MS.gene81141:CDS |
| CCTTATACGTCACATTTGGA+TGG | 0.466205 | 6.1:+54167665 | MS.gene81141:CDS |
| AATCCTAGGCATGTTATGAT+TGG | 0.472024 | 6.1:+54167203 | MS.gene81141:CDS |
| ATCTAAAAGCTTAGAATCGC+CGG | 0.472748 | 6.1:-54170470 | None:intergenic |
| AGAATTACTGGCTCAAGCTC+AGG | 0.477979 | 6.1:+54170528 | MS.gene81141:CDS |
| AATAATTACCTTCTGGAGAA+AGG | 0.480591 | 6.1:-54168308 | None:intergenic |
| AGAAGATGACAAAGAATATG+TGG | 0.484136 | 6.1:+54168204 | MS.gene81141:CDS |
| AAGTTGGAGGGAATTGGCAC+CGG | 0.485472 | 6.1:+54167573 | MS.gene81141:CDS |
| AAAGAGATGGAGAAGAAGCT+TGG | 0.487235 | 6.1:+54167320 | MS.gene81141:CDS |
| AATAATAAGAATATTAGAGT+TGG | 0.496382 | 6.1:+54166918 | MS.gene81141:CDS |
| GTTATGATTGGTATAGTGGT+TGG | 0.507924 | 6.1:+54167215 | MS.gene81141:CDS |
| ATCCTGAAAGTGTGAGAGTT+AGG | 0.512578 | 6.1:+54167402 | MS.gene81141:CDS |
| AATGCATTGACTGAAAATGA+AGG | 0.512873 | 6.1:+54167548 | MS.gene81141:CDS |
| CCTAAAGTCTACGAAAAGTT+GGG | 0.514744 | 6.1:+54170439 | MS.gene81141:CDS |
| TTATCGAAGCGTTGAAGAGA+GGG | 0.518421 | 6.1:+54167441 | MS.gene81141:CDS |
| AATATTAGAGTTGGTTGTCA+AGG | 0.519986 | 6.1:+54166927 | MS.gene81141:CDS |
| ATAAATGGGTTCAGAAGAGT+AGG | 0.531439 | 6.1:+54167615 | MS.gene81141:CDS |
| AGTTGGAGGGAATTGGCACC+GGG | 0.532756 | 6.1:+54167574 | MS.gene81141:CDS |
| TTTAGGAGATTAGAGAAAAG+GGG | 0.534498 | 6.1:+54167086 | MS.gene81141:CDS |
| TGAGATAAATAAGAATATTG+GGG | 0.535578 | 6.1:+54167013 | MS.gene81141:CDS |
| TGCCACACGTGGATCGTAGC+CGG | 0.536111 | 6.1:-54170416 | None:intergenic |
| ATTAGAGTTGGTTGTCAAGG+TGG | 0.541340 | 6.1:+54166930 | MS.gene81141:CDS |
| CTTCCCACCAGGTAAGCAAA+AGG | 0.542507 | 6.1:-54167732 | None:intergenic |
| GATAAATAAGAATATTGGGG+TGG | 0.543034 | 6.1:+54167016 | MS.gene81141:CDS |
| AATATTGGGGTGGGTTCCAA+AGG | 0.550451 | 6.1:+54167026 | MS.gene81141:CDS |
| CTTCTATTAGTTGCATCCGC+CGG | 0.553436 | 6.1:+54170397 | MS.gene81141:CDS |
| TACGGCTACCTTTCTCCAGA+AGG | 0.558879 | 6.1:+54168300 | MS.gene81141:CDS |
| GAAAATGAAGGGAAAGTTGG+AGG | 0.559808 | 6.1:+54167560 | MS.gene81141:CDS |
| GAGCGAGTTTGAGAAGATGA+AGG | 0.561104 | 6.1:+54167346 | MS.gene81141:CDS |
| AAGCAAAAGGCATTAACCAT+AGG | 0.561244 | 6.1:-54167719 | None:intergenic |
| ATAAATAAGAATATTGGGGT+GGG | 0.563572 | 6.1:+54167017 | MS.gene81141:CDS |
| ATACCAATCATAACATGCCT+AGG | 0.568681 | 6.1:-54167206 | None:intergenic |
| GAAATTGAAGCTGATTACAT+TGG | 0.569179 | 6.1:+54170373 | MS.gene81141:CDS |
| GGTTGAGTAAGGAGAATGTG+TGG | 0.571308 | 6.1:+54167462 | MS.gene81141:CDS |
| CTGTGTTTGGTGAAGAAAGT+GGG | 0.573793 | 6.1:+54167513 | MS.gene81141:CDS |
| ACTGGCTCAAGCTCAGGTGA+TGG | 0.577941 | 6.1:+54170534 | MS.gene81141:CDS |
| TCTGTGTTTGGTGAAGAAAG+TGG | 0.579845 | 6.1:+54167512 | MS.gene81141:CDS |
| GAGTTTGAGAAGATGAAGGC+GGG | 0.581578 | 6.1:+54167350 | MS.gene81141:CDS |
| ATGCATTGACTGAAAATGAA+GGG | 0.590623 | 6.1:+54167549 | MS.gene81141:CDS |
| ATTATCGAAGCGTTGAAGAG+AGG | 0.605086 | 6.1:+54167440 | MS.gene81141:CDS |
| CGAGTTTGAGAAGATGAAGG+CGG | 0.609178 | 6.1:+54167349 | MS.gene81141:CDS |
| GAAGATGACAAAGAATATGT+GGG | 0.612484 | 6.1:+54168205 | MS.gene81141:CDS |
| GAATTGGCACCGGGAAGATG+AGG | 0.612493 | 6.1:+54167583 | MS.gene81141:CDS |
| AAAATGAAGGGAAAGTTGGA+GGG | 0.619844 | 6.1:+54167561 | MS.gene81141:CDS |
| TGATTAGGTTGGACATGCTG+TGG | 0.626030 | 6.1:+54168166 | MS.gene81141:intron |
| AACACGACTATCTTCCCACC+AGG | 0.637312 | 6.1:-54167743 | None:intergenic |
| CGCCGGCTACGATCCACGTG+TGG | 0.642188 | 6.1:+54170414 | MS.gene81141:CDS |
| ATATATAAGACTGTAAGAGA+AGG | 0.650562 | 6.1:+54170571 | MS.gene81141:CDS |
| AGCAACTATTATTGGCCATG+AGG | 0.653728 | 6.1:+54167805 | MS.gene81141:CDS |
| TAGACTTTAGGTGCCACACG+TGG | 0.667217 | 6.1:-54170427 | None:intergenic |
| AGAGATGGAGAAGAAGCTTG+GGG | 0.675997 | 6.1:+54167322 | MS.gene81141:CDS |
| CACACGTGGATCGTAGCCGG+CGG | 0.706408 | 6.1:-54170413 | None:intergenic |
| GTTTGGTGAAGAAAGTGGGA+AGG | 0.710512 | 6.1:+54167517 | MS.gene81141:CDS |
| AAGACTGTAAGAGAAGGACA+TGG | 0.732952 | 6.1:+54170577 | MS.gene81141:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTATTTATATTTATTA+TGG | + | chr6.1:54170302-54170321 | MS.gene81141:intron | 0.0% |
| !! | CTGAAAAATTATAAAAAAAT+TGG | - | chr6.1:54170349-54170368 | None:intergenic | 10.0% |
| !!! | AAAATGTACAAATTTAAAAT+TGG | - | chr6.1:54169959-54169978 | None:intergenic | 10.0% |
| !!! | AATTTTGATTTATCATATAT+TGG | + | chr6.1:54169512-54169531 | MS.gene81141:intron | 10.0% |
| !!! | CAATTTTTTTATAATTTTTC+AGG | + | chr6.1:54170347-54170366 | MS.gene81141:intron | 10.0% |
| !! | AATAATAAGAATATTAGAGT+TGG | + | chr6.1:54166918-54166937 | MS.gene81141:CDS | 15.0% |
| !! | ATAACAATTATAAGTGTTTA+TGG | - | chr6.1:54169597-54169616 | None:intergenic | 15.0% |
| !! | ATATTGAATAGAAGATTAAA+CGG | - | chr6.1:54170089-54170108 | None:intergenic | 15.0% |
| !! | TTGAGATAAATAAGAATATT+GGG | + | chr6.1:54167012-54167031 | MS.gene81141:CDS | 15.0% |
| !! | TTTATTAAGCAATATGAAAT+TGG | + | chr6.1:54169380-54169399 | MS.gene81141:intron | 15.0% |
| !!! | ATTGGAAATTTTATTTTAGT+TGG | + | chr6.1:54169398-54169417 | MS.gene81141:intron | 15.0% |
| !!! | ATTTTAATTATACACAAATG+TGG | + | chr6.1:54170265-54170284 | MS.gene81141:intron | 15.0% |
| !!! | TTGAAGTTAATAAGAATTTT+AGG | + | chr6.1:54167111-54167130 | MS.gene81141:CDS | 15.0% |
| !!! | TTTGAGATAAATAAGAATAT+TGG | + | chr6.1:54167011-54167030 | MS.gene81141:CDS | 15.0% |
| !!! | TTTGATTTGTTTAACTTATT+AGG | + | chr6.1:54167834-54167853 | MS.gene81141:intron | 15.0% |
| !!! | TTTTTATAACTGTGTATTTT+GGG | + | chr6.1:54167246-54167265 | MS.gene81141:CDS | 15.0% |
| !!! | TTTTTTATAATTTTTCAGGA+TGG | + | chr6.1:54170351-54170370 | MS.gene81141:intron | 15.0% |
| !! | AAATTCCAATTCGTATTTAT+AGG | - | chr6.1:54169497-54169516 | None:intergenic | 20.0% |
| !! | CAAATAAAGAAAGAAAACAT+TGG | - | chr6.1:54169276-54169295 | None:intergenic | 20.0% |
| !! | CACGTTAAATATTAAGATAA+GGG | + | chr6.1:54168441-54168460 | MS.gene81141:intron | 20.0% |
| !! | CCAAATTAATTCATTTGTAT+AGG | + | chr6.1:54169861-54169880 | MS.gene81141:intron | 20.0% |
| !! | CCTATACAAATGAATTAATT+TGG | - | chr6.1:54169864-54169883 | None:intergenic | 20.0% |
| !! | GAAAAATTATGTGTTTGATT+TGG | - | chr6.1:54168652-54168671 | None:intergenic | 20.0% |
| !! | GAATGAAATTAATGCAAATA+TGG | - | chr6.1:54169709-54169728 | None:intergenic | 20.0% |
| !! | TCAAATAAGTTAATCCAAAT+AGG | - | chr6.1:54167860-54167879 | None:intergenic | 20.0% |
| !! | TGAGATAAATAAGAATATTG+GGG | + | chr6.1:54167013-54167032 | MS.gene81141:CDS | 20.0% |
| !! | TGGTATTCTTGTATAAATTA+AGG | - | chr6.1:54169455-54169474 | None:intergenic | 20.0% |
| !! | TTAAGCTATTTATTCAAACA+AGG | + | chr6.1:54168082-54168101 | MS.gene81141:intron | 20.0% |
| !!! | GGACTTTTATTAATTTTTGT+TGG | - | chr6.1:54168866-54168885 | None:intergenic | 20.0% |
| !!! | GTTTTTATAACTGTGTATTT+TGG | + | chr6.1:54167245-54167264 | MS.gene81141:CDS | 20.0% |
| ! | AACAGTGCAAATTATAAAAG+AGG | - | chr6.1:54169185-54169204 | None:intergenic | 25.0% |
| ! | AAGAGCAACAAAAATTCAAT+TGG | - | chr6.1:54168355-54168374 | None:intergenic | 25.0% |
| ! | AATTATAAGTGTTTATGGAG+AGG | - | chr6.1:54169592-54169611 | None:intergenic | 25.0% |
| ! | ACAAACCTATAAATACGAAT+TGG | + | chr6.1:54169489-54169508 | MS.gene81141:intron | 25.0% |
| ! | ATAAATAAGAATATTGGGGT+GGG | + | chr6.1:54167017-54167036 | MS.gene81141:CDS | 25.0% |
| ! | ATATATAAGACTGTAAGAGA+AGG | + | chr6.1:54170571-54170590 | MS.gene81141:CDS | 25.0% |
| ! | ATTATAAGTGTTTATGGAGA+GGG | - | chr6.1:54169591-54169610 | None:intergenic | 25.0% |
| ! | ATTGGTTATAAAGAGAGAAA+AGG | - | chr6.1:54168337-54168356 | None:intergenic | 25.0% |
| ! | CAAACCAAACAAAAACAAAA+TGG | - | chr6.1:54169104-54169123 | None:intergenic | 25.0% |
| ! | GACTCATTTCTTTGATATAT+AGG | + | chr6.1:54168386-54168405 | MS.gene81141:intron | 25.0% |
| ! | GCACGTTAAATATTAAGATA+AGG | + | chr6.1:54168440-54168459 | MS.gene81141:intron | 25.0% |
| ! | GTAAAGTAGTACAACTTAAT+GGG | - | chr6.1:54169624-54169643 | None:intergenic | 25.0% |
| ! | TAACCGTTTCTTAAAATCAA+GGG | + | chr6.1:54168892-54168911 | MS.gene81141:intron | 25.0% |
| ! | TAAGGGAAAAACATGAAATT+AGG | + | chr6.1:54168458-54168477 | MS.gene81141:intron | 25.0% |
| ! | TGCAAATATGGATGTAATTT+CGG | - | chr6.1:54169697-54169716 | None:intergenic | 25.0% |
| !! | CATTTACATTTGTTTCTTGT+TGG | + | chr6.1:54170040-54170059 | MS.gene81141:intron | 25.0% |
| !! | TCTTTCTTTATTTGTTGCTA+TGG | + | chr6.1:54169282-54169301 | MS.gene81141:intron | 25.0% |
| !! | TTTAACTTATTAGGCCTATT+TGG | + | chr6.1:54167843-54167862 | MS.gene81141:intron | 25.0% |
| !! | TTTAAGAAACGGTTACATTT+TGG | - | chr6.1:54168887-54168906 | None:intergenic | 25.0% |
| !!! | ATTTTAGGAGATTAGAGAAA+AGG | + | chr6.1:54167084-54167103 | MS.gene81141:CDS | 25.0% |
| !!! | CATTTTGTTTTTGTTTGGTT+TGG | + | chr6.1:54169102-54169121 | MS.gene81141:intron | 25.0% |
| !!! | CGTCTTTTTCAAAGAATTTT+AGG | + | chr6.1:54167069-54167088 | MS.gene81141:CDS | 25.0% |
| !!! | GTTTGTCATGGTATTTTTTA+TGG | - | chr6.1:54169475-54169494 | None:intergenic | 25.0% |
| !!! | TTCTCCATTTTGTTTTTGTT+TGG | + | chr6.1:54169097-54169116 | MS.gene81141:intron | 25.0% |
| !!! | TTTTAGGAGATTAGAGAAAA+GGG | + | chr6.1:54167085-54167104 | MS.gene81141:CDS | 25.0% |
| AACCATAATGAGTCTGATTT+CGG | + | chr6.1:54169981-54170000 | MS.gene81141:intron | 30.0% | |
| AATTTGGTCTATCTCATACA+CGG | - | chr6.1:54169848-54169867 | None:intergenic | 30.0% | |
| AGAAGATGACAAAGAATATG+TGG | + | chr6.1:54168204-54168223 | MS.gene81141:CDS | 30.0% | |
| ATGAAGTTTAGCTGAATTAG+TGG | + | chr6.1:54168491-54168510 | MS.gene81141:intron | 30.0% | |
| ATTTGAATGTAGTATGAGCA+TGG | + | chr6.1:54168676-54168695 | MS.gene81141:intron | 30.0% | |
| CAAATCAAACAAATACCTCA+TGG | - | chr6.1:54167823-54167842 | None:intergenic | 30.0% | |
| CAACTGTTTGAGAGATATTA+CGG | + | chr6.1:54167906-54167925 | MS.gene81141:intron | 30.0% | |
| CTTAAGCGCTTATTTGATTA+AGG | + | chr6.1:54168039-54168058 | MS.gene81141:intron | 30.0% | |
| GAAACAATATTTGACATGTC+TGG | + | chr6.1:54167928-54167947 | MS.gene81141:intron | 30.0% | |
| GAAATTGAAGCTGATTACAT+TGG | + | chr6.1:54170373-54170392 | MS.gene81141:CDS | 30.0% | |
| GAAGATGACAAAGAATATGT+GGG | + | chr6.1:54168205-54168224 | MS.gene81141:CDS | 30.0% | |
| GATAAATAAGAATATTGGGG+TGG | + | chr6.1:54167016-54167035 | MS.gene81141:CDS | 30.0% | |
| GGTAAAGTAGTACAACTTAA+TGG | - | chr6.1:54169625-54169644 | None:intergenic | 30.0% | |
| GTAACCGTTTCTTAAAATCA+AGG | + | chr6.1:54168891-54168910 | MS.gene81141:intron | 30.0% | |
| TACACAAATGTGGTGAATTA+TGG | + | chr6.1:54170275-54170294 | MS.gene81141:intron | 30.0% | |
| TCGTATTTATAGGTTTGTCA+TGG | - | chr6.1:54169487-54169506 | None:intergenic | 30.0% | |
| TTTAGGAGATTAGAGAAAAG+GGG | + | chr6.1:54167086-54167105 | MS.gene81141:CDS | 30.0% | |
| ! | AAAACATGGTTATGCCATTT+GGG | - | chr6.1:54169561-54169580 | None:intergenic | 30.0% |
| ! | AATAATTACCTTCTGGAGAA+AGG | - | chr6.1:54168311-54168330 | None:intergenic | 30.0% |
| ! | AATATTAGAGTTGGTTGTCA+AGG | + | chr6.1:54166927-54166946 | MS.gene81141:CDS | 30.0% |
| ! | ATAGGTAATGTTTGTTAGAC+AGG | + | chr6.1:54168404-54168423 | MS.gene81141:intron | 30.0% |
| ! | ATGAGGTTCTTGATGATAAA+TGG | + | chr6.1:54167600-54167619 | MS.gene81141:CDS | 30.0% |
| ! | TGAGGTTCTTGATGATAAAT+GGG | + | chr6.1:54167601-54167620 | MS.gene81141:CDS | 30.0% |
| ! | TTAAAATGCTGCACATTTTG+TGG | - | chr6.1:54167155-54167174 | None:intergenic | 30.0% |
| !! | AACTGTGTATTTTGGGAATA+TGG | + | chr6.1:54167253-54167272 | MS.gene81141:CDS | 30.0% |
| !! | AATGCATTGACTGAAAATGA+AGG | + | chr6.1:54167548-54167567 | MS.gene81141:CDS | 30.0% |
| !! | ACATTTGGATGGATTGAATT+GGG | + | chr6.1:54167676-54167695 | MS.gene81141:CDS | 30.0% |
| !! | ATGCATTGACTGAAAATGAA+GGG | + | chr6.1:54167549-54167568 | MS.gene81141:CDS | 30.0% |
| !! | ATGTGTTTGATTTGGTCTTA+AGG | - | chr6.1:54168644-54168663 | None:intergenic | 30.0% |
| !! | CAACCCTTGATTTTAAGAAA+CGG | - | chr6.1:54168898-54168917 | None:intergenic | 30.0% |
| !!! | GCTTCATTTTAACTTCTTTC+TGG | + | chr6.1:54170118-54170137 | MS.gene81141:intron | 30.0% |
| AAAATGAAGGGAAAGTTGGA+GGG | + | chr6.1:54167561-54167580 | MS.gene81141:CDS | 35.0% | |
| AAACGCAACAAGAAACATGA+AGG | - | chr6.1:54168934-54168953 | None:intergenic | 35.0% | |
| AAGAAAACGAGCAGAATTAC+TGG | + | chr6.1:54170516-54170535 | MS.gene81141:CDS | 35.0% | |
| AAGGAGGAATAATTACCTTC+TGG | - | chr6.1:54168318-54168337 | None:intergenic | 35.0% | |
| AATCCTAGGCATGTTATGAT+TGG | + | chr6.1:54167203-54167222 | MS.gene81141:CDS | 35.0% | |
| ACCTAAAGTCTACGAAAAGT+TGG | + | chr6.1:54170438-54170457 | MS.gene81141:CDS | 35.0% | |
| ACTGAAAATGAAGGGAAAGT+TGG | + | chr6.1:54167557-54167576 | MS.gene81141:CDS | 35.0% | |
| AGGAATAGAGCCAAATCATT+GGG | - | chr6.1:54168620-54168639 | None:intergenic | 35.0% | |
| ATACCAATCATAACATGCCT+AGG | - | chr6.1:54167209-54167228 | None:intergenic | 35.0% | |
| ATCTAAAAGCTTAGAATCGC+CGG | - | chr6.1:54170473-54170492 | None:intergenic | 35.0% | |
| CAAGAAACATGAAGGATGTA+TGG | - | chr6.1:54168926-54168945 | None:intergenic | 35.0% | |
| CCTAAAGTCTACGAAAAGTT+GGG | + | chr6.1:54170439-54170458 | MS.gene81141:CDS | 35.0% | |
| CTCATTAAAGCTAACACCTT+TGG | - | chr6.1:54167045-54167064 | None:intergenic | 35.0% | |
| CTTCAATTCCTAAGAGGTTA+GGG | + | chr6.1:54166979-54166998 | MS.gene81141:CDS | 35.0% | |
| GAAAACATGGTTATGCCATT+TGG | - | chr6.1:54169562-54169581 | None:intergenic | 35.0% | |
| GAAAAGTTGGGAAAAATCTC+CGG | + | chr6.1:54170451-54170470 | MS.gene81141:CDS | 35.0% | |
| GCAGAGATAGCAACTATTAT+TGG | + | chr6.1:54167797-54167816 | MS.gene81141:CDS | 35.0% | |
| GCATGTTATGATTGGTATAG+TGG | + | chr6.1:54167211-54167230 | MS.gene81141:CDS | 35.0% | |
| GCTTCAGAAAATTCTGTGTT+TGG | + | chr6.1:54167500-54167519 | MS.gene81141:CDS | 35.0% | |
| GGTTATAAAGAGAGAAAAGG+AGG | - | chr6.1:54168334-54168353 | None:intergenic | 35.0% | |
| GTCAAGGTGGTAACTTTAAT+GGG | + | chr6.1:54166943-54166962 | MS.gene81141:CDS | 35.0% | |
| GTTATGATTGGTATAGTGGT+TGG | + | chr6.1:54167215-54167234 | MS.gene81141:CDS | 35.0% | |
| GTTCAGAAGAGTAGGAAAAA+AGG | + | chr6.1:54167623-54167642 | MS.gene81141:CDS | 35.0% | |
| TACTAGAGAATTCATGCATC+AGG | - | chr6.1:54169646-54169665 | None:intergenic | 35.0% | |
| TATGGATGTAATTTCGGAGT+AGG | - | chr6.1:54169691-54169710 | None:intergenic | 35.0% | |
| TCTTCAATTCCTAAGAGGTT+AGG | + | chr6.1:54166978-54166997 | MS.gene81141:CDS | 35.0% | |
| TGTCAAGGTGGTAACTTTAA+TGG | + | chr6.1:54166942-54166961 | MS.gene81141:CDS | 35.0% | |
| TTTCTGTCTGTTCATTGTGT+TGG | + | chr6.1:54169247-54169266 | MS.gene81141:intron | 35.0% | |
| ! | AATTATTTTCTGCACAGACC+TGG | + | chr6.1:54168785-54168804 | MS.gene81141:intron | 35.0% |
| ! | AGAATTGGTTTCAGAATCCT+AGG | + | chr6.1:54167189-54167208 | MS.gene81141:CDS | 35.0% |
| ! | ATAAATGGGTTCAGAAGAGT+AGG | + | chr6.1:54167615-54167634 | MS.gene81141:CDS | 35.0% |
| ! | ATTGAATTGGGAGATTTTGG+TGG | + | chr6.1:54167688-54167707 | MS.gene81141:CDS | 35.0% |
| ! | ATTTGTTTCTTGTTGGACTG+TGG | + | chr6.1:54170047-54170066 | MS.gene81141:intron | 35.0% |
| ! | CGTTTTCTTCAATTCCTAAG+AGG | + | chr6.1:54166973-54166992 | MS.gene81141:CDS | 35.0% |
| ! | CTCTTGAGTTATCTCGTTTT+GGG | - | chr6.1:54168762-54168781 | None:intergenic | 35.0% |
| ! | GAAGTATTCATTAGCCCAAA+TGG | + | chr6.1:54169544-54169563 | MS.gene81141:intron | 35.0% |
| ! | TGGATTGAATTGGGAGATTT+TGG | + | chr6.1:54167685-54167704 | MS.gene81141:CDS | 35.0% |
| ! | TTTTGACCTTCCCAATGATT+TGG | + | chr6.1:54168607-54168626 | MS.gene81141:intron | 35.0% |
| !! | AAGCAAAAGGCATTAACCAT+AGG | - | chr6.1:54167722-54167741 | None:intergenic | 35.0% |
| !! | AGGATTCTGAAACCAATTCT+TGG | - | chr6.1:54167189-54167208 | None:intergenic | 35.0% |
| !! | CACATTTGGATGGATTGAAT+TGG | + | chr6.1:54167675-54167694 | MS.gene81141:CDS | 35.0% |
| !! | CTATGTCATCGCTTTTGTTA+CGG | + | chr6.1:54168282-54168301 | MS.gene81141:CDS | 35.0% |
| !! | GACATAGTGTTGACAATATC+AGG | - | chr6.1:54168269-54168288 | None:intergenic | 35.0% |
| !! | GGATTCTGAAACCAATTCTT+GGG | - | chr6.1:54167188-54167207 | None:intergenic | 35.0% |
| AAAGAGATGGAGAAGAAGCT+TGG | + | chr6.1:54167320-54167339 | MS.gene81141:CDS | 40.0% | |
| AAAGTAGCCATGTCAGAACA+TGG | - | chr6.1:54170191-54170210 | None:intergenic | 40.0% | |
| AAATGCGTTCGCTTCGTATA+AGG | - | chr6.1:54167287-54167306 | None:intergenic | 40.0% | |
| AAGACTGTAAGAGAAGGACA+TGG | + | chr6.1:54170577-54170596 | MS.gene81141:CDS | 40.0% | |
| AAGAGATGGAGAAGAAGCTT+GGG | + | chr6.1:54167321-54167340 | MS.gene81141:CDS | 40.0% | |
| AGCAACTATTATTGGCCATG+AGG | + | chr6.1:54167805-54167824 | MS.gene81141:CDS | 40.0% | |
| AGCTGAATTAGTGGAACTAG+AGG | + | chr6.1:54168500-54168519 | MS.gene81141:intron | 40.0% | |
| AGCTTCTTCTCCATCTCTTT+CGG | - | chr6.1:54167320-54167339 | None:intergenic | 40.0% | |
| AGTCATACCAAGTCCATACA+AGG | - | chr6.1:54168814-54168833 | None:intergenic | 40.0% | |
| AGTCTTAACACTTTGCTGCT+TGG | + | chr6.1:54168143-54168162 | MS.gene81141:intron | 40.0% | |
| ATAGAGCCAAATCATTGGGA+AGG | - | chr6.1:54168616-54168635 | None:intergenic | 40.0% | |
| ATCCTAACTCTCACACTTTC+AGG | - | chr6.1:54167407-54167426 | None:intergenic | 40.0% | |
| CAGGAATAGAGCCAAATCAT+TGG | - | chr6.1:54168621-54168640 | None:intergenic | 40.0% | |
| CCATCCAAATGTGACGTATA+AGG | - | chr6.1:54167668-54167687 | None:intergenic | 40.0% | |
| CCTAAGAGGTTAGGGAAAAT+GGG | + | chr6.1:54166987-54167006 | MS.gene81141:CDS | 40.0% | |
| CCTTATACGTCACATTTGGA+TGG | + | chr6.1:54167665-54167684 | MS.gene81141:CDS | 40.0% | |
| CTCCGAAATCAGACTCATTA+TGG | - | chr6.1:54169986-54170005 | None:intergenic | 40.0% | |
| GAAAATGAAGGGAAAGTTGG+AGG | + | chr6.1:54167560-54167579 | MS.gene81141:CDS | 40.0% | |
| GAAGAGTAGGAAAAAAGGTC+AGG | + | chr6.1:54167628-54167647 | MS.gene81141:CDS | 40.0% | |
| GAAGATTAAACGGAAACCCT+AGG | - | chr6.1:54170079-54170098 | None:intergenic | 40.0% | |
| GCAACCTTATACGTCACATT+TGG | + | chr6.1:54167661-54167680 | MS.gene81141:CDS | 40.0% | |
| TAACCAACCATGTTCTGACA+TGG | + | chr6.1:54170181-54170200 | MS.gene81141:intron | 40.0% | |
| TATTTCGCTACTCATCCATC+TGG | + | chr6.1:54170493-54170512 | MS.gene81141:CDS | 40.0% | |
| TCCTAAGAGGTTAGGGAAAA+TGG | + | chr6.1:54166986-54167005 | MS.gene81141:CDS | 40.0% | |
| TCTCTGATTCTGTTCAGTGT+TGG | + | chr6.1:54169329-54169348 | MS.gene81141:intron | 40.0% | |
| TGGGAAGATAGTCGTGTTTA+CGG | + | chr6.1:54167748-54167767 | MS.gene81141:CDS | 40.0% | |
| ! | ATCCTGAAAGTGTGAGAGTT+AGG | + | chr6.1:54167402-54167421 | MS.gene81141:CDS | 40.0% |
| ! | ATTAGAGTTGGTTGTCAAGG+TGG | + | chr6.1:54166930-54166949 | MS.gene81141:CDS | 40.0% |
| ! | ATTGGTATAGTGGTTGGTTC+AGG | + | chr6.1:54167221-54167240 | MS.gene81141:CDS | 40.0% |
| ! | CATAGTCAGAGGTGTAAACT+CGG | - | chr6.1:54168735-54168754 | None:intergenic | 40.0% |
| ! | CCCAACTTTTCGTAGACTTT+AGG | - | chr6.1:54170442-54170461 | None:intergenic | 40.0% |
| ! | CTGTGTTTGGTGAAGAAAGT+GGG | + | chr6.1:54167513-54167532 | MS.gene81141:CDS | 40.0% |
| ! | GCTCTTGAGTTATCTCGTTT+TGG | - | chr6.1:54168763-54168782 | None:intergenic | 40.0% |
| ! | GTTAATGCCTTTTGCTTACC+TGG | + | chr6.1:54167725-54167744 | MS.gene81141:CDS | 40.0% |
| ! | TCTGTGTTTGGTGAAGAAAG+TGG | + | chr6.1:54167512-54167531 | MS.gene81141:CDS | 40.0% |
| ! | TGCAGCATTTTAAGCCAAGA+GGG | + | chr6.1:54167162-54167181 | MS.gene81141:CDS | 40.0% |
| !! | AAGATGAAGGCGGGTTTTAA+GGG | + | chr6.1:54167359-54167378 | MS.gene81141:CDS | 40.0% |
| !! | ATTATCGAAGCGTTGAAGAG+AGG | + | chr6.1:54167440-54167459 | MS.gene81141:CDS | 40.0% |
| !! | GATTTTGATGCCGAAAGAGA+TGG | + | chr6.1:54167307-54167326 | MS.gene81141:CDS | 40.0% |
| !! | GTTTGATTTGGTCTTAAGGC+AGG | - | chr6.1:54168640-54168659 | None:intergenic | 40.0% |
| !! | TTATCGAAGCGTTGAAGAGA+GGG | + | chr6.1:54167441-54167460 | MS.gene81141:CDS | 40.0% |
| !! | TTGAGTTATCTCGTTTTGGG+AGG | - | chr6.1:54168759-54168778 | None:intergenic | 40.0% |
| AAGGGAAAGTTGGAGGGAAT+TGG | + | chr6.1:54167567-54167586 | MS.gene81141:CDS | 45.0% | |
| ACACTTTCAGGATGCATTGC+AGG | - | chr6.1:54167395-54167414 | None:intergenic | 45.0% | |
| AGAGATGGAGAAGAAGCTTG+GGG | + | chr6.1:54167322-54167341 | MS.gene81141:CDS | 45.0% | |
| CATCAAGAACCTCATCTTCC+CGG | - | chr6.1:54167595-54167614 | None:intergenic | 45.0% | |
| CGAGTTTGAGAAGATGAAGG+CGG | + | chr6.1:54167349-54167368 | MS.gene81141:CDS | 45.0% | |
| CTGTTGCTGTGTATCATCTC+CGG | + | chr6.1:54169004-54169023 | MS.gene81141:intron | 45.0% | |
| CTTCTATTAGTTGCATCCGC+CGG | + | chr6.1:54170397-54170416 | MS.gene81141:CDS | 45.0% | |
| GAGCGAGTTTGAGAAGATGA+AGG | + | chr6.1:54167346-54167365 | MS.gene81141:CDS | 45.0% | |
| GAGTTTGAGAAGATGAAGGC+GGG | + | chr6.1:54167350-54167369 | MS.gene81141:CDS | 45.0% | |
| GCTACACGACTCAACGTATA+GGG | - | chr6.1:54168579-54168598 | None:intergenic | 45.0% | |
| GGGAAGATAGTCGTGTTTAC+GGG | + | chr6.1:54167749-54167768 | MS.gene81141:CDS | 45.0% | |
| GGTTGAGTAAGGAGAATGTG+TGG | + | chr6.1:54167462-54167481 | MS.gene81141:CDS | 45.0% | |
| GTTGAAGAGAGGGTTGAGTA+AGG | + | chr6.1:54167451-54167470 | MS.gene81141:CDS | 45.0% | |
| TAGCCATGTCAGAACATGGT+TGG | - | chr6.1:54170187-54170206 | None:intergenic | 45.0% | |
| TGCTACACGACTCAACGTAT+AGG | - | chr6.1:54168580-54168599 | None:intergenic | 45.0% | |
| ! | AATATTGGGGTGGGTTCCAA+AGG | + | chr6.1:54167026-54167045 | MS.gene81141:CDS | 45.0% |
| ! | AATGCCTTTTGCTTACCTGG+TGG | + | chr6.1:54167728-54167747 | MS.gene81141:CDS | 45.0% |
| ! | AGAGAAGGACATGGTGTTGA+AGG | + | chr6.1:54170586-54170605 | MS.gene81141:CDS | 45.0% |
| ! | ATGCCTTTTGCTTACCTGGT+GGG | + | chr6.1:54167729-54167748 | MS.gene81141:CDS | 45.0% |
| ! | CACTTTGCTGCTTGGTGATT+AGG | + | chr6.1:54168151-54168170 | MS.gene81141:intron | 45.0% |
| ! | CCCATTTTCCCTAACCTCTT+AGG | - | chr6.1:54166990-54167009 | None:intergenic | 45.0% |
| ! | GTGCAGCATTTTAAGCCAAG+AGG | + | chr6.1:54167161-54167180 | MS.gene81141:CDS | 45.0% |
| ! | GTTTGGTGAAGAAAGTGGGA+AGG | + | chr6.1:54167517-54167536 | MS.gene81141:CDS | 45.0% |
| ! | TCTGCTCGTTTTCTTCCAGA+TGG | - | chr6.1:54170511-54170530 | None:intergenic | 45.0% |
| ! | TTGCTGCTTGGTGATTAGGT+TGG | + | chr6.1:54168155-54168174 | MS.gene81141:intron | 45.0% |
| ! | TTTTCTTGCGTTTGCGTGTC+AGG | + | chr6.1:54169072-54169091 | MS.gene81141:intron | 45.0% |
| !! | AGAATTACTGGCTCAAGCTC+AGG | + | chr6.1:54170528-54170547 | MS.gene81141:CDS | 45.0% |
| !! | GAAGATGAAGGCGGGTTTTA+AGG | + | chr6.1:54167358-54167377 | MS.gene81141:CDS | 45.0% |
| !! | GAGAGGGCATTACGAAAACA+TGG | - | chr6.1:54169575-54169594 | None:intergenic | 45.0% |
| !! | TGATTAGGTTGGACATGCTG+TGG | + | chr6.1:54168166-54168185 | MS.gene81141:intron | 45.0% |
| !! | TGGACTGTGGATTAGTCCTA+GGG | + | chr6.1:54170060-54170079 | MS.gene81141:intron | 45.0% |
| !! | TTGGACTGTGGATTAGTCCT+AGG | + | chr6.1:54170059-54170078 | MS.gene81141:intron | 45.0% |
| !! | TTTGGTGGTGAAGGATCCTA+TGG | + | chr6.1:54167703-54167722 | MS.gene81141:CDS | 45.0% |
| !! | TTTTGGGAGGTCATAGTCAG+AGG | - | chr6.1:54168746-54168765 | None:intergenic | 45.0% |
| !!! | AGATGAAGGCGGGTTTTAAG+GGG | + | chr6.1:54167360-54167379 | MS.gene81141:CDS | 45.0% |
| !!! | TTGGGAGATTTTGGTGGTGA+AGG | + | chr6.1:54167694-54167713 | MS.gene81141:CDS | 45.0% |
| !! | TGAAAAATTATAAAAAAATT+GGG | - | chr6.1:54170348-54170367 | None:intergenic | 5.0% |
| AACACGACTATCTTCCCACC+AGG | - | chr6.1:54167746-54167765 | None:intergenic | 50.0% | |
| AACCAATTCTTGGGCCCTCT+TGG | - | chr6.1:54167179-54167198 | None:intergenic | 50.0% | |
| AAGTTGGAGGGAATTGGCAC+CGG | + | chr6.1:54167573-54167592 | MS.gene81141:CDS | 50.0% | |
| AATGCAACACTCAGCATGCC+AGG | - | chr6.1:54169038-54169057 | None:intergenic | 50.0% | |
| ACAGACCTGGATGCCTTGTA+TGG | + | chr6.1:54168798-54168817 | MS.gene81141:intron | 50.0% | |
| ACAGCAACAGCATTGTGCAC+AGG | - | chr6.1:54168994-54169013 | None:intergenic | 50.0% | |
| AGGAAAAAAGGTCAGGAGCG+AGG | + | chr6.1:54167635-54167654 | MS.gene81141:CDS | 50.0% | |
| ATGCAACACTCAGCATGCCA+GGG | - | chr6.1:54169037-54169056 | None:intergenic | 50.0% | |
| CATCTTCTCAGCACTGTGTC+TGG | - | chr6.1:54168192-54168211 | None:intergenic | 50.0% | |
| CTGGATGCCTTGTATGGACT+TGG | + | chr6.1:54168804-54168823 | MS.gene81141:intron | 50.0% | |
| CTTCCCACCAGGTAAGCAAA+AGG | - | chr6.1:54167735-54167754 | None:intergenic | 50.0% | |
| GGAAAAAAGGTCAGGAGCGA+GGG | + | chr6.1:54167636-54167655 | MS.gene81141:CDS | 50.0% | |
| TACGGCTACCTTTCTCCAGA+AGG | + | chr6.1:54168300-54168319 | MS.gene81141:CDS | 50.0% | |
| ! | CAAGTCCATACAAGGCATCC+AGG | - | chr6.1:54168806-54168825 | None:intergenic | 50.0% |
| ! | TAGACTTTAGGTGCCACACG+TGG | - | chr6.1:54170430-54170449 | None:intergenic | 50.0% |
| AGCCAAGAGGGCCCAAGAAT+TGG | + | chr6.1:54167174-54167193 | MS.gene81141:CDS | 55.0% | |
| AGTTGGAGGGAATTGGCACC+GGG | + | chr6.1:54167574-54167593 | MS.gene81141:CDS | 55.0% | |
| ! | ACTGGCTCAAGCTCAGGTGA+TGG | + | chr6.1:54170534-54170553 | MS.gene81141:CDS | 55.0% |
| ! | GAATTGGCACCGGGAAGATG+AGG | + | chr6.1:54167583-54167602 | MS.gene81141:CDS | 55.0% |
| AGCATGCCAGGGAGGAATGC+CGG | - | chr6.1:54169026-54169045 | None:intergenic | 60.0% | |
| CAACACTCAGCATGCCAGGG+AGG | - | chr6.1:54169034-54169053 | None:intergenic | 60.0% | |
| TCATCTCCGGCATTCCTCCC+TGG | + | chr6.1:54169017-54169036 | MS.gene81141:intron | 60.0% | |
| TGCCACACGTGGATCGTAGC+CGG | - | chr6.1:54170419-54170438 | None:intergenic | 60.0% | |
| CACACGTGGATCGTAGCCGG+CGG | - | chr6.1:54170416-54170435 | None:intergenic | 65.0% | |
| ! | CGCCGGCTACGATCCACGTG+TGG | + | chr6.1:54170414-54170433 | MS.gene81141:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 54166906 | 54170618 | 54166906 | ID=MS.gene81141 |
| chr6.1 | mRNA | 54166906 | 54170618 | 54166906 | ID=MS.gene81141.t1;Parent=MS.gene81141 |
| chr6.1 | exon | 54166906 | 54167826 | 54166906 | ID=MS.gene81141.t1.exon1;Parent=MS.gene81141.t1 |
| chr6.1 | CDS | 54166906 | 54167826 | 54166906 | ID=cds.MS.gene81141.t1;Parent=MS.gene81141.t1 |
| chr6.1 | exon | 54168173 | 54168321 | 54168173 | ID=MS.gene81141.t1.exon2;Parent=MS.gene81141.t1 |
| chr6.1 | CDS | 54168173 | 54168321 | 54168173 | ID=cds.MS.gene81141.t1;Parent=MS.gene81141.t1 |
| chr6.1 | exon | 54170369 | 54170618 | 54170369 | ID=MS.gene81141.t1.exon3;Parent=MS.gene81141.t1 |
| chr6.1 | CDS | 54170369 | 54170618 | 54170369 | ID=cds.MS.gene81141.t1;Parent=MS.gene81141.t1 |
| Gene Sequence |
| Protein sequence |
