Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05344.t1 | XP_003620356.1 | 99.2 | 371 | 3 | 0 | 1 | 371 | 1 | 371 | 3.60E-217 | 763.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05344.t1 | Q3ED68 | 60.9 | 343 | 134 | 0 | 28 | 370 | 44 | 386 | 7.8e-128 | 458.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05344.t1 | G7KM53 | 99.2 | 371 | 3 | 0 | 1 | 371 | 1 | 371 | 2.6e-217 | 763.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene05344 | -0.809331 | 1.99E-50 | -1.69E-46 |
| MS.gene04917 | MS.gene05344 | -0.806214 | 9.17E-50 | -1.69E-46 |
| MS.gene051184 | MS.gene05344 | -0.802253 | 6.13E-49 | -1.69E-46 |
| MS.gene051452 | MS.gene05344 | -0.813983 | 1.94E-51 | -1.69E-46 |
| MS.gene05344 | MS.gene055880 | 0.80338 | 3.58E-49 | -1.69E-46 |
| MS.gene05344 | MS.gene057055 | -0.803828 | 2.89E-49 | -1.69E-46 |
| MS.gene05344 | MS.gene059050 | -0.816171 | 6.34E-52 | -1.69E-46 |
| MS.gene05344 | MS.gene059290 | -0.802225 | 6.21E-49 | -1.69E-46 |
| MS.gene05344 | MS.gene059360 | -0.804822 | 1.80E-49 | -1.69E-46 |
| MS.gene05344 | MS.gene059872 | 0.825244 | 5.21E-54 | -1.69E-46 |
| MS.gene05344 | MS.gene060869 | -0.801435 | 9.02E-49 | -1.69E-46 |
| MS.gene05344 | MS.gene061958 | -0.837606 | 4.71E-57 | -1.69E-46 |
| MS.gene05344 | MS.gene063636 | -0.80744 | 5.05E-50 | -1.69E-46 |
| MS.gene05344 | MS.gene066221 | -0.812886 | 3.38E-51 | -1.69E-46 |
| MS.gene05344 | MS.gene067857 | -0.812209 | 4.76E-51 | -1.69E-46 |
| MS.gene05344 | MS.gene069065 | -0.804042 | 2.61E-49 | -1.69E-46 |
| MS.gene05344 | MS.gene069199 | -0.8149 | 1.22E-51 | -1.69E-46 |
| MS.gene05344 | MS.gene069225 | -0.811483 | 6.85E-51 | -1.69E-46 |
| MS.gene05344 | MS.gene070954 | 0.857805 | 1.27E-62 | -1.69E-46 |
| MS.gene05344 | MS.gene08260 | 0.807704 | 4.44E-50 | -1.69E-46 |
| MS.gene05344 | MS.gene08889 | -0.801095 | 1.06E-48 | -1.69E-46 |
| MS.gene05344 | MS.gene09186 | 0.80853 | 2.96E-50 | -1.69E-46 |
| MS.gene05344 | MS.gene09187 | 0.800047 | 1.73E-48 | -1.69E-46 |
| MS.gene05344 | MS.gene20407 | 0.811074 | 8.40E-51 | -1.69E-46 |
| MS.gene05344 | MS.gene23152 | 0.819566 | 1.09E-52 | -1.69E-46 |
| MS.gene05344 | MS.gene23464 | -0.821579 | 3.75E-53 | -1.69E-46 |
| MS.gene05344 | MS.gene23961 | -0.811849 | 5.70E-51 | -1.69E-46 |
| MS.gene05344 | MS.gene24561 | -0.806388 | 8.43E-50 | -1.69E-46 |
| MS.gene05344 | MS.gene24597 | -0.812398 | 4.33E-51 | -1.69E-46 |
| MS.gene05344 | MS.gene26584 | -0.827124 | 1.86E-54 | -1.69E-46 |
| MS.gene05344 | MS.gene29053 | 0.813642 | 2.31E-51 | -1.69E-46 |
| MS.gene05344 | MS.gene30158 | 0.802795 | 4.73E-49 | -1.69E-46 |
| MS.gene05344 | MS.gene33991 | -0.804817 | 1.80E-49 | -1.69E-46 |
| MS.gene05344 | MS.gene35518 | -0.810069 | 1.38E-50 | -1.69E-46 |
| MS.gene05344 | MS.gene36098 | 0.818886 | 1.55E-52 | -1.69E-46 |
| MS.gene05344 | MS.gene36124 | -0.801979 | 6.97E-49 | -1.69E-46 |
| MS.gene05344 | MS.gene37653 | -0.802655 | 5.06E-49 | -1.69E-46 |
| MS.gene05344 | MS.gene37900 | -0.803676 | 3.11E-49 | -1.69E-46 |
| MS.gene05344 | MS.gene38786 | -0.831187 | 1.92E-55 | -1.69E-46 |
| MS.gene05344 | MS.gene39222 | -0.823518 | 1.33E-53 | -1.69E-46 |
| MS.gene05344 | MS.gene41775 | -0.813414 | 2.59E-51 | -1.69E-46 |
| MS.gene05344 | MS.gene42295 | -0.804571 | 2.03E-49 | -1.69E-46 |
| MS.gene05344 | MS.gene46447 | -0.803778 | 2.96E-49 | -1.69E-46 |
| MS.gene05344 | MS.gene47818 | -0.827665 | 1.38E-54 | -1.69E-46 |
| MS.gene05344 | MS.gene47995 | -0.816234 | 6.14E-52 | -1.69E-46 |
| MS.gene05344 | MS.gene48393 | 0.843765 | 1.15E-58 | -1.69E-46 |
| MS.gene05344 | MS.gene49816 | -0.80721 | 5.65E-50 | -1.69E-46 |
| MS.gene05344 | MS.gene51557 | -0.812229 | 4.71E-51 | -1.69E-46 |
| MS.gene05344 | MS.gene54353 | -0.801403 | 9.16E-49 | -1.69E-46 |
| MS.gene05344 | MS.gene55282 | -0.805944 | 1.05E-49 | -1.69E-46 |
| MS.gene05344 | MS.gene56132 | -0.811473 | 6.88E-51 | -1.69E-46 |
| MS.gene05344 | MS.gene58616 | -0.814467 | 1.52E-51 | -1.69E-46 |
| MS.gene05344 | MS.gene59207 | -0.818458 | 1.94E-52 | -1.69E-46 |
| MS.gene05344 | MS.gene60372 | -0.823269 | 1.52E-53 | -1.69E-46 |
| MS.gene05344 | MS.gene60374 | -0.810491 | 1.12E-50 | -1.69E-46 |
| MS.gene05344 | MS.gene62956 | -0.807639 | 4.58E-50 | -1.69E-46 |
| MS.gene05344 | MS.gene63281 | -0.807961 | 3.91E-50 | -1.69E-46 |
| MS.gene05344 | MS.gene65412 | -0.807162 | 5.78E-50 | -1.69E-46 |
| MS.gene05344 | MS.gene65554 | -0.813566 | 2.40E-51 | -1.69E-46 |
| MS.gene05344 | MS.gene66818 | -0.803692 | 3.09E-49 | -1.69E-46 |
| MS.gene05344 | MS.gene68171 | -0.808972 | 2.38E-50 | -1.69E-46 |
| MS.gene05344 | MS.gene72933 | -0.815814 | 7.62E-52 | -1.69E-46 |
| MS.gene05344 | MS.gene74237 | -0.823875 | 1.09E-53 | -1.69E-46 |
| MS.gene05344 | MS.gene74672 | -0.800486 | 1.41E-48 | -1.69E-46 |
| MS.gene05344 | MS.gene76046 | -0.812375 | 4.38E-51 | -1.69E-46 |
| MS.gene05344 | MS.gene76494 | -0.82585 | 3.74E-54 | -1.69E-46 |
| MS.gene05344 | MS.gene80182 | 0.845089 | 5.05E-59 | -1.69E-46 |
| MS.gene05344 | MS.gene81141 | -0.813857 | 2.07E-51 | -1.69E-46 |
| MS.gene05344 | MS.gene81715 | -0.801697 | 7.97E-49 | -1.69E-46 |
| MS.gene05344 | MS.gene81887 | 0.803083 | 4.13E-49 | -1.69E-46 |
| MS.gene05344 | MS.gene82354 | -0.802434 | 5.62E-49 | -1.69E-46 |
| MS.gene05344 | MS.gene82978 | -0.814377 | 1.59E-51 | -1.69E-46 |
| MS.gene05344 | MS.gene84672 | -0.818066 | 2.38E-52 | -1.69E-46 |
| MS.gene05344 | MS.gene85109 | -0.834451 | 2.98E-56 | -1.69E-46 |
| MS.gene05344 | MS.gene85111 | -0.812609 | 3.89E-51 | -1.69E-46 |
| MS.gene05344 | MS.gene86315 | -0.811012 | 8.66E-51 | -1.69E-46 |
| MS.gene05344 | MS.gene86693 | 0.802335 | 5.89E-49 | -1.69E-46 |
| MS.gene05344 | MS.gene90119 | -0.838922 | 2.16E-57 | -1.69E-46 |
| MS.gene05344 | MS.gene90510 | -0.841978 | 3.42E-58 | -1.69E-46 |
| MS.gene05344 | MS.gene90882 | -0.82897 | 6.69E-55 | -1.69E-46 |
| MS.gene05344 | MS.gene91519 | 0.819764 | 9.78E-53 | -1.69E-46 |
| MS.gene05344 | MS.gene93983 | -0.834266 | 3.31E-56 | -1.69E-46 |
| MS.gene05344 | MS.gene94992 | -0.840677 | 7.53E-58 | -1.69E-46 |
| MS.gene05344 | MS.gene95280 | 0.812988 | 3.21E-51 | -1.69E-46 |
| MS.gene05344 | MS.gene97638 | -0.800426 | 1.45E-48 | -1.69E-46 |
| MS.gene05344 | MS.gene98791 | 0.808305 | 3.31E-50 | -1.69E-46 |
| MS.gene05344 | MS.gene99465 | -0.812045 | 5.16E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05344.t1 | MTR_6g081860 | 99.191 | 371 | 3 | 0 | 1 | 371 | 1 | 371 | 0.0 | 774 |
| MS.gene05344.t1 | MTR_1g109230 | 62.097 | 372 | 135 | 2 | 6 | 371 | 24 | 395 | 3.07e-179 | 503 |
| MS.gene05344.t1 | MTR_8g106610 | 59.299 | 371 | 146 | 3 | 5 | 371 | 51 | 420 | 6.38e-158 | 450 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05344.t1 | AT3G18210 | 67.409 | 359 | 116 | 1 | 4 | 362 | 29 | 386 | 0.0 | 534 |
| MS.gene05344.t1 | AT3G18210 | 67.409 | 359 | 116 | 1 | 4 | 362 | 29 | 386 | 0.0 | 534 |
| MS.gene05344.t1 | AT1G22950 | 59.557 | 361 | 143 | 1 | 10 | 370 | 29 | 386 | 6.68e-169 | 477 |
| MS.gene05344.t1 | AT1G48740 | 52.342 | 363 | 169 | 2 | 5 | 363 | 11 | 373 | 1.41e-133 | 387 |
| MS.gene05344.t1 | AT1G48740 | 52.646 | 359 | 166 | 2 | 5 | 359 | 11 | 369 | 6.42e-133 | 386 |
| MS.gene05344.t1 | AT5G43660 | 50.292 | 342 | 169 | 1 | 23 | 363 | 5 | 346 | 5.70e-131 | 379 |
| MS.gene05344.t1 | AT5G43660 | 50.292 | 342 | 169 | 1 | 23 | 363 | 54 | 395 | 3.39e-130 | 379 |
| MS.gene05344.t1 | AT1G48740 | 50.667 | 375 | 169 | 3 | 5 | 363 | 11 | 385 | 4.84e-130 | 378 |
| MS.gene05344.t1 | AT5G43660 | 50.298 | 336 | 166 | 1 | 23 | 357 | 5 | 340 | 1.16e-128 | 374 |
| MS.gene05344.t1 | AT5G43660 | 50.298 | 336 | 166 | 1 | 23 | 357 | 54 | 389 | 9.50e-128 | 373 |
| MS.gene05344.t1 | AT1G48700 | 53.226 | 310 | 145 | 0 | 60 | 369 | 1 | 310 | 2.21e-125 | 363 |
| MS.gene05344.t1 | AT1G48700 | 53.710 | 283 | 131 | 0 | 87 | 369 | 3 | 285 | 5.87e-117 | 341 |
| MS.gene05344.t1 | AT5G43660 | 51.667 | 300 | 144 | 1 | 23 | 321 | 5 | 304 | 3.78e-116 | 340 |
| MS.gene05344.t1 | AT1G48700 | 54.307 | 267 | 122 | 0 | 103 | 369 | 8 | 274 | 5.46e-111 | 325 |
| MS.gene05344.t1 | AT1G48700 | 54.307 | 267 | 122 | 0 | 103 | 369 | 8 | 274 | 5.46e-111 | 325 |
| MS.gene05344.t1 | AT1G48700 | 57.203 | 236 | 101 | 0 | 87 | 322 | 3 | 238 | 3.00e-103 | 304 |
| MS.gene05344.t1 | AT1G48740 | 54.962 | 262 | 117 | 1 | 103 | 363 | 27 | 288 | 1.49e-102 | 305 |
| MS.gene05344.t1 | AT1G48700 | 50.996 | 251 | 92 | 1 | 103 | 322 | 8 | 258 | 2.83e-90 | 272 |
| MS.gene05344.t1 | AT1G47940 | 34.500 | 200 | 76 | 9 | 129 | 317 | 95 | 250 | 1.52e-19 | 88.2 |
Find 85 sgRNAs with CRISPR-Local
Find 386 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCGCCATTGTTCCGTTTC+CGG | 0.138062 | 6.3:-75174249 | None:intergenic |
| ACCATATTTATTCATTCTAT+TGG | 0.203059 | 6.3:-75178602 | None:intergenic |
| TCTGGTTTGTGATCCTTGTT+AGG | 0.230593 | 6.3:-75174296 | None:intergenic |
| GCTTGTCAAGCATTGGTTCT+AGG | 0.235665 | 6.3:-75178645 | None:intergenic |
| CATGGATTTGTTGTTGAATA+TGG | 0.249598 | 6.3:+75178872 | MS.gene05344:CDS |
| GGTGCTAGAGCGACAACTTC+TGG | 0.253256 | 6.3:+75179847 | MS.gene05344:CDS |
| CCCAATAGAATGAATAAATA+TGG | 0.307192 | 6.3:+75178601 | MS.gene05344:CDS |
| GAAGATAAATTCACATTATC+AGG | 0.308517 | 6.3:+75177277 | MS.gene05344:CDS |
| TTTCTCCAACGAGCTGAAAA+TGG | 0.312093 | 6.3:-75174354 | None:intergenic |
| CCATATTTATTCATTCTATT+GGG | 0.324572 | 6.3:-75178601 | None:intergenic |
| CCTTACCCAAGCAAACATTC+AGG | 0.332217 | 6.3:-75179251 | None:intergenic |
| TCAAGATCATCGTAACCTTC+TGG | 0.336936 | 6.3:-75174314 | None:intergenic |
| TCCGTTTCCGGTTGCGGTGG+TGG | 0.340270 | 6.3:-75174237 | None:intergenic |
| GGCGATTCCACCACCGCAAC+CGG | 0.344813 | 6.3:+75174230 | MS.gene05344:CDS |
| ACCAATGCTTGACAAGCTTA+TGG | 0.348093 | 6.3:+75178651 | MS.gene05344:CDS |
| TTGCTTAAGTATCTTCCTAA+TGG | 0.354170 | 6.3:+75174440 | MS.gene05344:CDS |
| TGAATGCAACCGCATGAAAA+TGG | 0.363891 | 6.3:+75180049 | MS.gene05344:CDS |
| AAGGTTGCTCCTCCAACTTC+TGG | 0.375206 | 6.3:-75178839 | None:intergenic |
| CATTGTTCCGTTTCCGGTTG+CGG | 0.379724 | 6.3:-75174243 | None:intergenic |
| ACTCTGTGACGTTCACCATT+AGG | 0.423325 | 6.3:-75174455 | None:intergenic |
| TGGTGGAATCGCCACCGTGT+GGG | 0.423882 | 6.3:-75174220 | None:intergenic |
| AGGTTACGATGATCTTGAAT+TGG | 0.426210 | 6.3:+75174319 | MS.gene05344:CDS |
| TAACATTTACCTCTAGATAA+AGG | 0.428788 | 6.3:-75178688 | None:intergenic |
| ATCACCTTCTGCACCACATA+AGG | 0.432966 | 6.3:-75179885 | None:intergenic |
| CTGGTTTGTGATCCTTGTTA+GGG | 0.433763 | 6.3:-75174295 | None:intergenic |
| TCCACCACCGCAACCGGAAA+CGG | 0.434107 | 6.3:+75174236 | MS.gene05344:CDS |
| GTGCTAGAGCGACAACTTCT+GGG | 0.437081 | 6.3:+75179848 | MS.gene05344:CDS |
| GGGTGGCTGAAGCAAAATTT+CGG | 0.437545 | 6.3:+75178569 | MS.gene05344:CDS |
| AGAGATGAAACTGCATCAAA+AGG | 0.449552 | 6.3:+75180007 | MS.gene05344:CDS |
| GAAAGCAATAAGTGATAATA+CGG | 0.450528 | 6.3:+75178305 | MS.gene05344:CDS |
| TGTGAGAAACATGTAAATAC+AGG | 0.457323 | 6.3:+75179312 | MS.gene05344:CDS |
| TCCATAAGCTTGTCAAGCAT+TGG | 0.460548 | 6.3:-75178652 | None:intergenic |
| ATTTGAAATACATAAATGTC+TGG | 0.461793 | 6.3:-75178363 | None:intergenic |
| GGTGGAATCGCCACCGTGTG+GGG | 0.465327 | 6.3:-75174219 | None:intergenic |
| TCAGTCTTCTATCCAGAAGT+TGG | 0.471304 | 6.3:+75178827 | MS.gene05344:intron |
| CCTGAATGTTTGCTTGGGTA+AGG | 0.471548 | 6.3:+75179251 | MS.gene05344:CDS |
| GCACAGCTCGTCCAGGGACA+TGG | 0.471792 | 6.3:-75179801 | None:intergenic |
| GCAACCTTGGATTCACATCA+TGG | 0.477939 | 6.3:+75178854 | MS.gene05344:CDS |
| AGTAACCCTGAATGTTTGCT+TGG | 0.482387 | 6.3:+75179245 | MS.gene05344:CDS |
| TTTGATTATTCCCATGTCCC+TGG | 0.490719 | 6.3:+75179790 | MS.gene05344:CDS |
| CGATGAAGCACAGCTCGTCC+AGG | 0.492249 | 6.3:-75179808 | None:intergenic |
| CACATGTGCTGCTACCAGAT+TGG | 0.494360 | 6.3:+75180085 | MS.gene05344:CDS |
| CTTATTGCTTTCAGAAATGT+CGG | 0.500673 | 6.3:-75178294 | None:intergenic |
| AGAAGTTGGAGGAGCAACCT+TGG | 0.500873 | 6.3:+75178841 | MS.gene05344:CDS |
| CTTACCCAAGCAAACATTCA+GGG | 0.502083 | 6.3:-75179250 | None:intergenic |
| GTGTACAACTCGTGATGTAA+AGG | 0.503012 | 6.3:-75178246 | None:intergenic |
| GTAACCCTGAATGTTTGCTT+GGG | 0.506246 | 6.3:+75179246 | MS.gene05344:CDS |
| GTTGCATTCACCACACCAGC+TGG | 0.517093 | 6.3:-75180036 | None:intergenic |
| CGCAACCGGAAACGGAACAA+TGG | 0.525816 | 6.3:+75174244 | MS.gene05344:CDS |
| TTTGTTCGTCCTTTATCTAG+AGG | 0.533570 | 6.3:+75178679 | MS.gene05344:CDS |
| GGTGCTGTACTTGATGACTT+TGG | 0.533879 | 6.3:+75178622 | MS.gene05344:CDS |
| ATCAAAAGGATTTCTCCAGC+TGG | 0.536039 | 6.3:+75180021 | MS.gene05344:CDS |
| GTCTTCTATCCAGAAGTTGG+AGG | 0.536705 | 6.3:+75178830 | MS.gene05344:intron |
| GTGGAATCGCCACCGTGTGG+GGG | 0.538052 | 6.3:-75174218 | None:intergenic |
| GTGGTGGAATCGCCACCGTG+TGG | 0.549336 | 6.3:-75174221 | None:intergenic |
| TGCAACAACTCACAAAACTC+TGG | 0.549644 | 6.3:-75178393 | None:intergenic |
| ATCGAATGAACTTCCTTATG+TGG | 0.565167 | 6.3:+75179872 | MS.gene05344:CDS |
| CAATGGCGAATTCGAGAATG+AGG | 0.567057 | 6.3:+75174261 | MS.gene05344:CDS |
| AAATCCATGATGTGAATCCA+AGG | 0.568992 | 6.3:-75178858 | None:intergenic |
| CACAGCTCGTCCAGGGACAT+GGG | 0.570642 | 6.3:-75179800 | None:intergenic |
| CAATCTGGTAGCAGCACATG+TGG | 0.570893 | 6.3:-75180084 | None:intergenic |
| AAGGATTTCTCCAGCTGGTG+TGG | 0.571130 | 6.3:+75180026 | MS.gene05344:CDS |
| TGTTCCGTTTCCGGTTGCGG+TGG | 0.583469 | 6.3:-75174240 | None:intergenic |
| TACTTCTGTAGGTTTCCATG+TGG | 0.589079 | 6.3:+75179212 | MS.gene05344:intron |
| GAAGATAAAGATCTTGACTT+GGG | 0.589228 | 6.3:+75178896 | MS.gene05344:CDS |
| CGCAAAGGAAGGAGAATCCA+CGG | 0.591559 | 6.3:+75180494 | MS.gene05344:CDS |
| CATCGTGGTCGACACCGTCA+TGG | 0.595515 | 6.3:+75179826 | MS.gene05344:CDS |
| TCCAACGAGCTGAAAATGGA+AGG | 0.598397 | 6.3:-75174350 | None:intergenic |
| AGGTTTCCATGTGGATGACT+CGG | 0.601410 | 6.3:+75179221 | MS.gene05344:intron |
| TTGTGAGTTGTTGCAAGCTG+AGG | 0.602832 | 6.3:+75178401 | MS.gene05344:CDS |
| CAGGAGTTGATCGCAAAGGA+AGG | 0.603850 | 6.3:+75180483 | MS.gene05344:intron |
| TGAAGATAAAGATCTTGACT+TGG | 0.605076 | 6.3:+75178895 | MS.gene05344:CDS |
| AATACATAAATGTCTGGAGA+GGG | 0.618356 | 6.3:-75178357 | None:intergenic |
| AACAAGGATCACAAACCAGA+AGG | 0.623650 | 6.3:+75174299 | MS.gene05344:CDS |
| GCTGAGATTGAACCCTAACA+AGG | 0.623983 | 6.3:+75174283 | MS.gene05344:CDS |
| GTCGGCACAAAGAATGCAGT+AGG | 0.634154 | 6.3:-75178276 | None:intergenic |
| GATGAAGCACAGCTCGTCCA+GGG | 0.636219 | 6.3:-75179807 | None:intergenic |
| ACTTCCTTATGTGGTGCAGA+AGG | 0.651748 | 6.3:+75179881 | MS.gene05344:CDS |
| AAATACATAAATGTCTGGAG+AGG | 0.660927 | 6.3:-75178358 | None:intergenic |
| ATTACAGGAGTTGATCGCAA+AGG | 0.661240 | 6.3:+75180479 | MS.gene05344:intron |
| TTGTCGCTCTAGCACCATGA+CGG | 0.661546 | 6.3:-75179840 | None:intergenic |
| GGACGAGCTGTGCTTCATCG+TGG | 0.677999 | 6.3:+75179811 | MS.gene05344:CDS |
| TTACTTCCGAGTCATCCACA+TGG | 0.714166 | 6.3:-75179227 | None:intergenic |
| GAGCAAAAGAAACTACGCCG+TGG | 0.719034 | 6.3:-75180511 | None:intergenic |
| AAATACAGGAAGTCAACCAG+AGG | 0.719088 | 6.3:+75179326 | MS.gene05344:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTTTTTTTTAATTTT+GGG | + | chr6.3:75175967-75175986 | MS.gene05344:intron | 0.0% |
| !!! | TTTTATTTTTTTTTTAATTT+TGG | + | chr6.3:75175966-75175985 | MS.gene05344:intron | 0.0% |
| !! | GATTAAATTCTTAAATAAAA+AGG | + | chr6.3:75177714-75177733 | MS.gene05344:intron | 10.0% |
| !! | TATTCTATTAAAATGATTTA+GGG | + | chr6.3:75178738-75178757 | MS.gene05344:intron | 10.0% |
| !! | TCAAAAAAATAAAAATTGAA+AGG | - | chr6.3:75180346-75180365 | None:intergenic | 10.0% |
| !! | TTATTCTATTAAAATGATTT+AGG | + | chr6.3:75178737-75178756 | MS.gene05344:intron | 10.0% |
| !!! | ATATAATATTATTTTATACC+AGG | - | chr6.3:75180215-75180234 | None:intergenic | 10.0% |
| !!! | GATCATAATTTTTTAAATTT+TGG | + | chr6.3:75176403-75176422 | MS.gene05344:intron | 10.0% |
| !!! | TCATAATTTTTTAAATTTTG+GGG | + | chr6.3:75176405-75176424 | MS.gene05344:intron | 10.0% |
| !! | ATAATATGAATTCTCTTAAA+GGG | + | chr6.3:75177911-75177930 | MS.gene05344:intron | 15.0% |
| !! | ATGGGATAAAAATATATATT+TGG | - | chr6.3:75177312-75177331 | None:intergenic | 15.0% |
| !! | ATTCTATTAAAATGATTTAG+GGG | + | chr6.3:75178739-75178758 | MS.gene05344:intron | 15.0% |
| !! | GTAATATCATAGAAATTATA+TGG | - | chr6.3:75180464-75180483 | None:intergenic | 15.0% |
| !! | TAAACTAAATTAATCGAAAT+AGG | - | chr6.3:75175312-75175331 | None:intergenic | 15.0% |
| !! | TATAATATGAATTCTCTTAA+AGG | + | chr6.3:75177910-75177929 | MS.gene05344:intron | 15.0% |
| !! | TATAATTTCTATGATATTAC+AGG | + | chr6.3:75180464-75180483 | MS.gene05344:intron | 15.0% |
| !!! | AATATCATTGATAATGATTA+TGG | - | chr6.3:75177162-75177181 | None:intergenic | 15.0% |
| !!! | TTTATCTTTTGTTATAGAAA+TGG | + | chr6.3:75175838-75175857 | MS.gene05344:intron | 15.0% |
| !! | AAATTGAACCTATTTATTCA+CGG | + | chr6.3:75180423-75180442 | MS.gene05344:intron | 20.0% |
| !! | AAGAATACAGTTATAACTTT+GGG | - | chr6.3:75178476-75178495 | None:intergenic | 20.0% |
| !! | AATTTATGGTGAAATGTTAT+TGG | + | chr6.3:75177013-75177032 | MS.gene05344:intron | 20.0% |
| !! | ACCATATTTATTCATTCTAT+TGG | - | chr6.3:75178605-75178624 | None:intergenic | 20.0% |
| !! | AGTAGTATATGTATAGAAAA+AGG | + | chr6.3:75179418-75179437 | MS.gene05344:intron | 20.0% |
| !! | ATAAGAATTATTGTAAGTCT+TGG | - | chr6.3:75178215-75178234 | None:intergenic | 20.0% |
| !! | ATAATCAGAATATTAACATC+AGG | - | chr6.3:75179176-75179195 | None:intergenic | 20.0% |
| !! | ATCAAAACATAAACATACTA+TGG | - | chr6.3:75175071-75175090 | None:intergenic | 20.0% |
| !! | ATTCAAAAAGAAAAAGCAAA+GGG | - | chr6.3:75177065-75177084 | None:intergenic | 20.0% |
| !! | ATTTACAGTTTATAGTACAA+TGG | + | chr6.3:75174688-75174707 | MS.gene05344:intron | 20.0% |
| !! | ATTTATGGTGAAATGTTATT+GGG | + | chr6.3:75177014-75177033 | MS.gene05344:intron | 20.0% |
| !! | CCATATTTATTCATTCTATT+GGG | - | chr6.3:75178604-75178623 | None:intergenic | 20.0% |
| !! | CTTATATATGATAAGTTCTT+AGG | + | chr6.3:75175874-75175893 | MS.gene05344:intron | 20.0% |
| !! | GAGAATTCATATTATACTAA+AGG | - | chr6.3:75177906-75177925 | None:intergenic | 20.0% |
| !! | TCAAAACATAAACATACTAT+GGG | - | chr6.3:75175070-75175089 | None:intergenic | 20.0% |
| !! | TCATATATATATAGACAAGT+AGG | + | chr6.3:75177467-75177486 | MS.gene05344:intron | 20.0% |
| !! | TGAAAAACTGAAATTTAACA+AGG | + | chr6.3:75176349-75176368 | MS.gene05344:intron | 20.0% |
| !! | TTAAAACTGAAAACGTTATT+GGG | + | chr6.3:75176900-75176919 | MS.gene05344:intron | 20.0% |
| !! | TTCTATTAAAATGATTTAGG+GGG | + | chr6.3:75178740-75178759 | MS.gene05344:intron | 20.0% |
| !!! | AAATTTTAGAAGCAACAAAT+GGG | - | chr6.3:75176998-75177017 | None:intergenic | 20.0% |
| !!! | AGATTGAAAATTTTGAGAAA+TGG | + | chr6.3:75178548-75178567 | MS.gene05344:intron | 20.0% |
| !!! | ATATTATTACCTCACTTTTA+TGG | + | chr6.3:75177177-75177196 | MS.gene05344:intron | 20.0% |
| !!! | ATATTTTACTAGCCTTTTTT+TGG | + | chr6.3:75174794-75174813 | MS.gene05344:intron | 20.0% |
| !!! | ATTAATGGAAGAATTTTCAA+AGG | - | chr6.3:75177105-75177124 | None:intergenic | 20.0% |
| !!! | ATTTGAAATACATAAATGTC+TGG | - | chr6.3:75178366-75178385 | None:intergenic | 20.0% |
| !!! | ATTTTTATCCCATTTTTTCT+GGG | + | chr6.3:75177319-75177338 | MS.gene05344:intron | 20.0% |
| !!! | GATTGAAAATTTTGAGAAAT+GGG | + | chr6.3:75178549-75178568 | MS.gene05344:intron | 20.0% |
| !!! | TAAATTTTAGAAGCAACAAA+TGG | - | chr6.3:75176999-75177018 | None:intergenic | 20.0% |
| !!! | TACATATACTACTTTTATCT+AGG | - | chr6.3:75179411-75179430 | None:intergenic | 20.0% |
| !!! | TATTTTACTAGCCTTTTTTT+GGG | + | chr6.3:75174795-75174814 | MS.gene05344:intron | 20.0% |
| !!! | TATTTTTATCCCATTTTTTC+TGG | + | chr6.3:75177318-75177337 | MS.gene05344:intron | 20.0% |
| !!! | TTTCTCAAAATTTTCAATCT+AGG | - | chr6.3:75178548-75178567 | None:intergenic | 20.0% |
| !!! | TTTGCTTTTTCTTTTTGAAT+GGG | + | chr6.3:75177065-75177084 | MS.gene05344:intron | 20.0% |
| !!! | TTTGTTGCTTCTAAAATTTA+TGG | + | chr6.3:75176999-75177018 | MS.gene05344:intron | 20.0% |
| !!! | TTTTGAAGTGTTTATGTTAT+GGG | + | chr6.3:75175664-75175683 | MS.gene05344:intron | 20.0% |
| !!! | TTTTTGAAGTGTTTATGTTA+TGG | + | chr6.3:75175663-75175682 | MS.gene05344:intron | 20.0% |
| ! | AAAACTGAAATTTCAGTATC+CGG | - | chr6.3:75180390-75180409 | None:intergenic | 25.0% |
| ! | AAAATAAAATAATGCTCCTC+AGG | + | chr6.3:75179533-75179552 | MS.gene05344:intron | 25.0% |
| ! | AACTACAAATACTAATCACA+AGG | - | chr6.3:75180191-75180210 | None:intergenic | 25.0% |
| ! | AATTCGATGAACATAACATA+GGG | + | chr6.3:75174645-75174664 | MS.gene05344:intron | 25.0% |
| ! | ACCAAAACATAAACATACTA+TGG | - | chr6.3:75175578-75175597 | None:intergenic | 25.0% |
| ! | AGTAAAATGTACCCAAAAAA+AGG | - | chr6.3:75174809-75174828 | None:intergenic | 25.0% |
| ! | AGTAACAATCAACATATTTC+TGG | - | chr6.3:75178113-75178132 | None:intergenic | 25.0% |
| ! | ATAGAGCATGTTAATGAATT+TGG | + | chr6.3:75176592-75176611 | MS.gene05344:intron | 25.0% |
| ! | ATCATTGTCAATAGTATAAG+CGG | + | chr6.3:75178441-75178460 | MS.gene05344:intron | 25.0% |
| ! | ATTTGAGCTTAATGAAATGT+TGG | + | chr6.3:75179469-75179488 | MS.gene05344:intron | 25.0% |
| ! | ATTTGTTTAACCACAATATG+AGG | + | chr6.3:75177851-75177870 | MS.gene05344:intron | 25.0% |
| ! | CAAGAATACAGTTATAACTT+TGG | - | chr6.3:75178477-75178496 | None:intergenic | 25.0% |
| ! | CATTCAAAAAGAAAAAGCAA+AGG | - | chr6.3:75177066-75177085 | None:intergenic | 25.0% |
| ! | CCAAAACATAAACATACTAT+GGG | - | chr6.3:75175577-75175596 | None:intergenic | 25.0% |
| ! | CCCAATAGAATGAATAAATA+TGG | + | chr6.3:75178601-75178620 | MS.gene05344:CDS | 25.0% |
| ! | CTACTTGTCTATAAACTTAT+TGG | + | chr6.3:75179385-75179404 | MS.gene05344:intron | 25.0% |
| ! | GAAAAAGGAAATCAAATAAG+GGG | + | chr6.3:75175179-75175198 | MS.gene05344:intron | 25.0% |
| ! | GAAAGCAATAAGTGATAATA+CGG | + | chr6.3:75178305-75178324 | MS.gene05344:CDS | 25.0% |
| ! | GAAGATAAATTCACATTATC+AGG | + | chr6.3:75177277-75177296 | MS.gene05344:CDS | 25.0% |
| ! | GAGAGGGTTTAATTAAAAAA+AGG | + | chr6.3:75175929-75175948 | MS.gene05344:intron | 25.0% |
| ! | GGAAAAAGGAAATCAAATAA+GGG | + | chr6.3:75175178-75175197 | MS.gene05344:intron | 25.0% |
| ! | GGTATTATGAATATAGCTAT+GGG | - | chr6.3:75178956-75178975 | None:intergenic | 25.0% |
| ! | GTAAAGATATTGTAATTCCA+TGG | - | chr6.3:75177140-75177159 | None:intergenic | 25.0% |
| ! | GTTAAAACTGAAAACGTTAT+TGG | + | chr6.3:75176899-75176918 | MS.gene05344:intron | 25.0% |
| ! | GTTTATAGACAAGTAGTTAA+TGG | - | chr6.3:75179381-75179400 | None:intergenic | 25.0% |
| ! | TAACATTTACCTCTAGATAA+AGG | - | chr6.3:75178691-75178710 | None:intergenic | 25.0% |
| ! | TACAAACAGATATACAAACT+TGG | - | chr6.3:75179577-75179596 | None:intergenic | 25.0% |
| ! | TAGAGCATGTTAATGAATTT+GGG | + | chr6.3:75176593-75176612 | MS.gene05344:intron | 25.0% |
| ! | TAGAGGTAAATGTTATGTAA+CGG | + | chr6.3:75178696-75178715 | MS.gene05344:intron | 25.0% |
| ! | TATGTATTGTTGAGTTTAAC+CGG | + | chr6.3:75180368-75180387 | MS.gene05344:intron | 25.0% |
| ! | TATTCAAAACCATAAAAGTG+AGG | - | chr6.3:75177189-75177208 | None:intergenic | 25.0% |
| ! | TCAAATAATTCAATCCAAAC+AGG | - | chr6.3:75175205-75175224 | None:intergenic | 25.0% |
| ! | TCTATTAAAATGATTTAGGG+GGG | + | chr6.3:75178741-75178760 | MS.gene05344:intron | 25.0% |
| ! | TGGTATTATGAATATAGCTA+TGG | - | chr6.3:75178957-75178976 | None:intergenic | 25.0% |
| !! | AAATATGTTGATTGTTACTC+TGG | + | chr6.3:75178114-75178133 | MS.gene05344:intron | 25.0% |
| !! | TAATACTTTTACGGTTTAAC+CGG | + | chr6.3:75177507-75177526 | MS.gene05344:intron | 25.0% |
| !! | TCATTTTCTTAAATCACTAC+CGG | - | chr6.3:75174583-75174602 | None:intergenic | 25.0% |
| !! | TTTGAAGTGTTTATGTTATG+GGG | + | chr6.3:75175665-75175684 | MS.gene05344:intron | 25.0% |
| !!! | AAGAATGTTGTTAACTTGTT+AGG | + | chr6.3:75176467-75176486 | MS.gene05344:intron | 25.0% |
| !!! | AATTTTGGGGATAAATTTGA+TGG | + | chr6.3:75176418-75176437 | MS.gene05344:intron | 25.0% |
| !!! | ATTTGGATTTTGAGTAAACT+AGG | + | chr6.3:75176823-75176842 | MS.gene05344:intron | 25.0% |
| !!! | ATTTTGGGGATAAATTTGAT+GGG | + | chr6.3:75176419-75176438 | MS.gene05344:intron | 25.0% |
| !!! | CTTAATGGACTTGATAATAT+AGG | + | chr6.3:75176762-75176781 | MS.gene05344:intron | 25.0% |
| !!! | CTTTGCTTTTTCTTTTTGAA+TGG | + | chr6.3:75177064-75177083 | MS.gene05344:intron | 25.0% |
| !!! | GCTGTTTTTATTAGCTATAT+TGG | + | chr6.3:75174830-75174849 | MS.gene05344:intron | 25.0% |
| !!! | GTTGTTTTTGTAAGCTATAT+TGG | - | chr6.3:75175439-75175458 | None:intergenic | 25.0% |
| !!! | TGTTTTTATAGCTTATCTAC+TGG | - | chr6.3:75174946-75174965 | None:intergenic | 25.0% |
| !!! | TTTGGATTTTGAGTAAACTA+GGG | + | chr6.3:75176824-75176843 | MS.gene05344:intron | 25.0% |
| !!! | TTTTGAAGTGTTTCTGTTAT+GGG | + | chr6.3:75175157-75175176 | MS.gene05344:intron | 25.0% |
| !!! | TTTTGAGTAAACTAAGCATT+TGG | + | chr6.3:75176806-75176825 | MS.gene05344:intron | 25.0% |
| !!! | TTTTTGAAGTGTTTCTGTTA+TGG | + | chr6.3:75175156-75175175 | MS.gene05344:intron | 25.0% |
| AAACAAATAACAGCAGATGA+AGG | - | chr6.3:75177839-75177858 | None:intergenic | 30.0% | |
| AAATAAGCTGTTATCCAAAC+AGG | + | chr6.3:75175044-75175063 | MS.gene05344:intron | 30.0% | |
| AAATACATAAATGTCTGGAG+AGG | - | chr6.3:75178361-75178380 | None:intergenic | 30.0% | |
| AAATGACAAAATCAGGAAGT+AGG | - | chr6.3:75177761-75177780 | None:intergenic | 30.0% | |
| AATACATAAATGTCTGGAGA+GGG | - | chr6.3:75178360-75178379 | None:intergenic | 30.0% | |
| AATATTAACATCAGGAATGC+AGG | - | chr6.3:75179168-75179187 | None:intergenic | 30.0% | |
| ACAACAACAATCTCACAATT+GGG | - | chr6.3:75176715-75176734 | None:intergenic | 30.0% | |
| ACATTCGATCAACATAACAT+AGG | + | chr6.3:75175285-75175304 | MS.gene05344:intron | 30.0% | |
| AGGAAGTAGGATTCATTATT+AGG | - | chr6.3:75177748-75177767 | None:intergenic | 30.0% | |
| AGTTACGATGAAAATGCTAT+TGG | + | chr6.3:75176945-75176964 | MS.gene05344:intron | 30.0% | |
| ATAAGCTGTTTATCCAAACA+GGG | + | chr6.3:75175899-75175918 | MS.gene05344:intron | 30.0% | |
| ATATGAATTCTCTTAAAGGG+CGG | + | chr6.3:75177914-75177933 | MS.gene05344:intron | 30.0% | |
| ATCCAACAGCATCAAAATAT+CGG | - | chr6.3:75179124-75179143 | None:intergenic | 30.0% | |
| CATGATGCAATTATTCATTC+AGG | + | chr6.3:75179626-75179645 | MS.gene05344:intron | 30.0% | |
| CATTCGATCAACATAACATA+GGG | + | chr6.3:75175286-75175305 | MS.gene05344:intron | 30.0% | |
| CTAGGTTAAATGACAAAATC+AGG | - | chr6.3:75177768-75177787 | None:intergenic | 30.0% | |
| CTTAATAGTAGTCATACAAC+TGG | + | chr6.3:75176172-75176191 | MS.gene05344:intron | 30.0% | |
| CTTATTGCTTTCAGAAATGT+CGG | - | chr6.3:75178297-75178316 | None:intergenic | 30.0% | |
| GAAGATAAAGATCTTGACTT+GGG | + | chr6.3:75178896-75178915 | MS.gene05344:CDS | 30.0% | |
| GAATGAATAATTGCATCATG+AGG | - | chr6.3:75179626-75179645 | None:intergenic | 30.0% | |
| GAATTCGATGAACATAACAT+AGG | + | chr6.3:75174644-75174663 | MS.gene05344:intron | 30.0% | |
| GATTAGTATTTGTAGTTTCC+TGG | + | chr6.3:75180194-75180213 | MS.gene05344:intron | 30.0% | |
| GGGAAAAAGGAAATCAAATA+AGG | + | chr6.3:75175177-75175196 | MS.gene05344:intron | 30.0% | |
| GTGTTTATTCATTGCATAAG+TGG | + | chr6.3:75176444-75176463 | MS.gene05344:intron | 30.0% | |
| TAAAATAAGCCAATCCAAAC+AGG | - | chr6.3:75175712-75175731 | None:intergenic | 30.0% | |
| TAGAAAAAGACTTACCAATC+TGG | - | chr6.3:75180102-75180121 | None:intergenic | 30.0% | |
| TATAAGCTGTATATCCAAAC+AGG | + | chr6.3:75175551-75175570 | MS.gene05344:intron | 30.0% | |
| TATAAGCTGTTTATCCAAAC+AGG | + | chr6.3:75175898-75175917 | MS.gene05344:intron | 30.0% | |
| TCTCTTAAACAGTCTCATAA+GGG | - | chr6.3:75175754-75175773 | None:intergenic | 30.0% | |
| TGAAGATAAAGATCTTGACT+TGG | + | chr6.3:75178895-75178914 | MS.gene05344:CDS | 30.0% | |
| TGTGAGAAACATGTAAATAC+AGG | + | chr6.3:75179312-75179331 | MS.gene05344:CDS | 30.0% | |
| TTCTCTTAAACAGTCTCATA+AGG | - | chr6.3:75175755-75175774 | None:intergenic | 30.0% | |
| TTGCTTAAGTATCTATCAAG+TGG | + | chr6.3:75176561-75176580 | MS.gene05344:intron | 30.0% | |
| TTGCTTAAGTATCTTCCTAA+TGG | + | chr6.3:75174440-75174459 | MS.gene05344:CDS | 30.0% | |
| ! | ATGAGTTGTGTTTTATGCAT+AGG | + | chr6.3:75176000-75176019 | MS.gene05344:intron | 30.0% |
| ! | CCCATAGTATGTTTATGTTT+TGG | + | chr6.3:75175067-75175086 | MS.gene05344:intron | 30.0% |
| ! | TATTCATGGAACTGACTTAA+TGG | + | chr6.3:75176747-75176766 | MS.gene05344:intron | 30.0% |
| !! | AAGATTGTTCTTGACTTGTT+AGG | + | chr6.3:75176643-75176662 | MS.gene05344:intron | 30.0% |
| !! | ATGAGTTTTGTGAAACTGTT+TGG | + | chr6.3:75175346-75175365 | MS.gene05344:intron | 30.0% |
| !! | CATGGATTTGTTGTTGAATA+TGG | + | chr6.3:75178872-75178891 | MS.gene05344:CDS | 30.0% |
| !! | TGAAAATTTTGAGAAATGGG+TGG | + | chr6.3:75178552-75178571 | MS.gene05344:CDS | 30.0% |
| !! | TGAGTTTTGTGAAACTGTTT+GGG | + | chr6.3:75175347-75175366 | MS.gene05344:intron | 30.0% |
| !! | TGCCATGTGTGTTTTATTAT+CGG | + | chr6.3:75179095-75179114 | MS.gene05344:intron | 30.0% |
| !! | TTTTTCTTTTTGAATGGGCT+GGG | + | chr6.3:75177070-75177089 | MS.gene05344:intron | 30.0% |
| !!! | GAACTTATTTTAGTTTCTCC+AGG | + | chr6.3:75175772-75175791 | MS.gene05344:intron | 30.0% |
| !!! | GTGGTTGTACACTTTTTTTA+CGG | + | chr6.3:75179741-75179760 | MS.gene05344:intron | 30.0% |
| AAATCCATGATGTGAATCCA+AGG | - | chr6.3:75178861-75178880 | None:intergenic | 35.0% | |
| AAGAAAATGACACAGCTGAA+TGG | + | chr6.3:75174593-75174612 | MS.gene05344:intron | 35.0% | |
| AATCGCTAGATTGTGTTATG+TGG | + | chr6.3:75176126-75176145 | MS.gene05344:intron | 35.0% | |
| ACATCAGTTTGTCTTCATGT+TGG | + | chr6.3:75179935-75179954 | MS.gene05344:intron | 35.0% | |
| ACCTATGAGAAATAGCAAGA+AGG | - | chr6.3:75179723-75179742 | None:intergenic | 35.0% | |
| ACTTGAAGATTAACGAACCT+TGG | + | chr6.3:75180243-75180262 | MS.gene05344:intron | 35.0% | |
| AGAAAATGACATGAACGTGT+GGG | + | chr6.3:75177431-75177450 | MS.gene05344:intron | 35.0% | |
| AGAGATGAAACTGCATCAAA+AGG | + | chr6.3:75180007-75180026 | MS.gene05344:CDS | 35.0% | |
| AGCAGTTCAAAGCTTAAGAA+AGG | + | chr6.3:75177590-75177609 | MS.gene05344:intron | 35.0% | |
| AGGTTACGATGATCTTGAAT+TGG | + | chr6.3:75174319-75174338 | MS.gene05344:CDS | 35.0% | |
| AGTGAAAATGTAGATGGATG+AGG | - | chr6.3:75180134-75180153 | None:intergenic | 35.0% | |
| ATAACACAATCTAGCGATTG+AGG | - | chr6.3:75176125-75176144 | None:intergenic | 35.0% | |
| ATCGAATGAACTTCCTTATG+TGG | + | chr6.3:75179872-75179891 | MS.gene05344:CDS | 35.0% | |
| ATGCTGTTGGATTCATATAC+TGG | + | chr6.3:75179132-75179151 | MS.gene05344:intron | 35.0% | |
| CAAACTGATGTAGCAATTGA+AGG | - | chr6.3:75179926-75179945 | None:intergenic | 35.0% | |
| CAACAACAATCTCACAATTG+GGG | - | chr6.3:75176714-75176733 | None:intergenic | 35.0% | |
| CACAACAACAATCTCACAAT+TGG | - | chr6.3:75176716-75176735 | None:intergenic | 35.0% | |
| CACCGATAATAAAACACACA+TGG | - | chr6.3:75179100-75179119 | None:intergenic | 35.0% | |
| CACTCTTGTCACAATTACAT+GGG | + | chr6.3:75177998-75178017 | MS.gene05344:intron | 35.0% | |
| CATACAGAAAGCTGACTAAA+TGG | + | chr6.3:75177532-75177551 | MS.gene05344:intron | 35.0% | |
| CATGTAATTGTGACAAGAGT+GGG | - | chr6.3:75177999-75178018 | None:intergenic | 35.0% | |
| CTACTATTAAGTCAGTTGCA+TGG | - | chr6.3:75176163-75176182 | None:intergenic | 35.0% | |
| CTGAAACACCGTGAATAAAT+AGG | - | chr6.3:75180434-75180453 | None:intergenic | 35.0% | |
| GAAAGCAGTGAAAATGTAGA+TGG | - | chr6.3:75180140-75180159 | None:intergenic | 35.0% | |
| GAACTGTTAACCTCATATTG+TGG | - | chr6.3:75177864-75177883 | None:intergenic | 35.0% | |
| GACTTCCTGCTTTCAAATAA+CGG | - | chr6.3:75179770-75179789 | None:intergenic | 35.0% | |
| GATAATTGAGTACTACTAGC+AGG | - | chr6.3:75177622-75177641 | None:intergenic | 35.0% | |
| GCAGTTCAAAGCTTAAGAAA+GGG | + | chr6.3:75177591-75177610 | MS.gene05344:intron | 35.0% | |
| GGGAAAAGGAAATCAAACAA+GGG | + | chr6.3:75175685-75175704 | MS.gene05344:intron | 35.0% | |
| GTGTTTATGTTATGGGGAAA+AGG | + | chr6.3:75175671-75175690 | MS.gene05344:intron | 35.0% | |
| TATGAATTCTCTTAAAGGGC+GGG | + | chr6.3:75177915-75177934 | MS.gene05344:intron | 35.0% | |
| TCATGGAGATTGGAACAATT+TGG | + | chr6.3:75179353-75179372 | MS.gene05344:intron | 35.0% | |
| TCCTTCATTGAGACAAAGTT+GGG | + | chr6.3:75178059-75178078 | MS.gene05344:intron | 35.0% | |
| TGAGAAATAGCAAGAAGGAA+TGG | - | chr6.3:75179718-75179737 | None:intergenic | 35.0% | |
| TGGCAACTTTCAAGCATTAA+TGG | - | chr6.3:75177120-75177139 | None:intergenic | 35.0% | |
| TTAATGCTTGAAAGTTGCCA+TGG | + | chr6.3:75177120-75177139 | MS.gene05344:intron | 35.0% | |
| TTAATTAAACCCTCTCACCT+TGG | - | chr6.3:75175925-75175944 | None:intergenic | 35.0% | |
| TTGGAAATAAGATCACCACA+AGG | - | chr6.3:75178196-75178215 | None:intergenic | 35.0% | |
| TTTGCCTGTATTACAACTCT+AGG | + | chr6.3:75177350-75177369 | MS.gene05344:intron | 35.0% | |
| TTTGTTCGTCCTTTATCTAG+AGG | + | chr6.3:75178679-75178698 | MS.gene05344:CDS | 35.0% | |
| ! | ACTTGGGTAAGATTTTGCTT+TGG | + | chr6.3:75178912-75178931 | MS.gene05344:intron | 35.0% |
| ! | AGCTTAATGAAATGTTGGCT+TGG | + | chr6.3:75179474-75179493 | MS.gene05344:intron | 35.0% |
| ! | ATCTAGAGTCTTACTTCTGT+AGG | + | chr6.3:75179201-75179220 | MS.gene05344:intron | 35.0% |
| ! | CTCTGGAGATACATTCAAAT+TGG | + | chr6.3:75178131-75178150 | MS.gene05344:intron | 35.0% |
| ! | CTTTTTCTTTTTGAATGGGC+TGG | + | chr6.3:75177069-75177088 | MS.gene05344:intron | 35.0% |
| ! | GTGTTTCTGTTATGGGAAAA+AGG | + | chr6.3:75175164-75175183 | MS.gene05344:intron | 35.0% |
| ! | TGGAGCTGGTAATACTTTTA+CGG | + | chr6.3:75177498-75177517 | MS.gene05344:intron | 35.0% |
| !! | ACAAAAGCACCCAGAAAAAA+TGG | - | chr6.3:75177331-75177350 | None:intergenic | 35.0% |
| !! | CAAAAGCACCCAGAAAAAAT+GGG | - | chr6.3:75177330-75177349 | None:intergenic | 35.0% |
| !! | TAAGTTTTGTGAGCCTGTTT+GGG | - | chr6.3:75174921-75174940 | None:intergenic | 35.0% |
| !! | TCCTTCTTGCTATTTCTCAT+AGG | + | chr6.3:75179719-75179738 | MS.gene05344:intron | 35.0% |
| !! | TTCTTGCTATTTCTCATAGG+TGG | + | chr6.3:75179722-75179741 | MS.gene05344:intron | 35.0% |
| !!! | GAAGGTTTTTAGTTTGGTTC+AGG | - | chr6.3:75177821-75177840 | None:intergenic | 35.0% |
| !!! | GCAGATGAAGGTTTTTAGTT+TGG | - | chr6.3:75177827-75177846 | None:intergenic | 35.0% |
| !!! | GCTATAAGTTGTTGTTTTCC+TGG | - | chr6.3:75175793-75175812 | None:intergenic | 35.0% |
| !!! | TTTTCTTTTTGAATGGGCTG+GGG | + | chr6.3:75177071-75177090 | MS.gene05344:intron | 35.0% |
| AAACATACTATGGGCCTGTT+TGG | - | chr6.3:75175061-75175080 | None:intergenic | 40.0% | |
| AAATACAGGAAGTCAACCAG+AGG | + | chr6.3:75179326-75179345 | MS.gene05344:CDS | 40.0% | |
| AACAAGGATCACAAACCAGA+AGG | + | chr6.3:75174299-75174318 | MS.gene05344:CDS | 40.0% | |
| AAGCCTTACCCAACTAATTG+GGG | - | chr6.3:75176049-75176068 | None:intergenic | 40.0% | |
| AATCAAACAAGGGTCCTGTT+TGG | + | chr6.3:75175695-75175714 | MS.gene05344:intron | 40.0% | |
| AATCAAATAAGGGGCCTGTT+TGG | + | chr6.3:75175188-75175207 | MS.gene05344:intron | 40.0% | |
| AATTAGAGCGACACAAACAC+TGG | + | chr6.3:75176210-75176229 | MS.gene05344:intron | 40.0% | |
| ACAACACTAAATAACTCCCC+CGG | - | chr6.3:75179666-75179685 | None:intergenic | 40.0% | |
| ACCAATGCTTGACAAGCTTA+TGG | + | chr6.3:75178651-75178670 | MS.gene05344:CDS | 40.0% | |
| ACTTTGTCTCAATGAAGGAC+TGG | - | chr6.3:75178058-75178077 | None:intergenic | 40.0% | |
| AGTAACCCTGAATGTTTGCT+TGG | + | chr6.3:75179245-75179264 | MS.gene05344:CDS | 40.0% | |
| AGTCAGCTTTCTGTATGAAC+CGG | - | chr6.3:75177529-75177548 | None:intergenic | 40.0% | |
| ATACCAGATGTGTACAGAAG+AGG | + | chr6.3:75178971-75178990 | MS.gene05344:intron | 40.0% | |
| ATACTGTTTGCAAGACAGTG+AGG | + | chr6.3:75177667-75177686 | MS.gene05344:intron | 40.0% | |
| ATCAAAAGGATTTCTCCAGC+TGG | + | chr6.3:75180021-75180040 | MS.gene05344:CDS | 40.0% | |
| ATGAATTCTCTTAAAGGGCG+GGG | + | chr6.3:75177916-75177935 | MS.gene05344:intron | 40.0% | |
| ATTGAGACAAAGTTGGGACT+TGG | + | chr6.3:75178065-75178084 | MS.gene05344:intron | 40.0% | |
| CAAGCCTTACCCAACTAATT+GGG | - | chr6.3:75176050-75176069 | None:intergenic | 40.0% | |
| CACACATGGCATCAATCAAA+AGG | - | chr6.3:75179086-75179105 | None:intergenic | 40.0% | |
| CAGAAGGTGATTTCATCTGT+TGG | + | chr6.3:75179897-75179916 | MS.gene05344:intron | 40.0% | |
| CCAACCTAGAGTTGTAATAC+AGG | - | chr6.3:75177357-75177376 | None:intergenic | 40.0% | |
| CCAAGTTCGACATTAATGTC+AGG | - | chr6.3:75177644-75177663 | None:intergenic | 40.0% | |
| CCACTCTTGTCACAATTACA+TGG | + | chr6.3:75177997-75178016 | MS.gene05344:intron | 40.0% | |
| CCATGTAATTGTGACAAGAG+TGG | - | chr6.3:75178000-75178019 | None:intergenic | 40.0% | |
| CCTGACATTAATGTCGAACT+TGG | + | chr6.3:75177641-75177660 | MS.gene05344:intron | 40.0% | |
| CCTGTATTACAACTCTAGGT+TGG | + | chr6.3:75177354-75177373 | MS.gene05344:intron | 40.0% | |
| CGCGAAAAAACGAGCATATT+CGG | - | chr6.3:75174389-75174408 | None:intergenic | 40.0% | |
| CTGAATGGAATCACATGTCT+CGG | + | chr6.3:75174608-75174627 | MS.gene05344:intron | 40.0% | |
| CTTACCCAAGCAAACATTCA+GGG | - | chr6.3:75179253-75179272 | None:intergenic | 40.0% | |
| GAAAAAACGAGCATATTCGG+AGG | - | chr6.3:75174386-75174405 | None:intergenic | 40.0% | |
| GAGAAAATGACATGAACGTG+TGG | + | chr6.3:75177430-75177449 | MS.gene05344:intron | 40.0% | |
| GGGGAAAAGGAAATCAAACA+AGG | + | chr6.3:75175684-75175703 | MS.gene05344:intron | 40.0% | |
| GTAACCCTGAATGTTTGCTT+GGG | + | chr6.3:75179246-75179265 | MS.gene05344:CDS | 40.0% | |
| GTCCTTCATTGAGACAAAGT+TGG | + | chr6.3:75178058-75178077 | MS.gene05344:intron | 40.0% | |
| GTGCTGGAGATGATTTATCT+AGG | + | chr6.3:75176303-75176322 | MS.gene05344:intron | 40.0% | |
| GTGTACAACTCGTGATGTAA+AGG | - | chr6.3:75178249-75178268 | None:intergenic | 40.0% | |
| TACCAGATGTGTACAGAAGA+GGG | + | chr6.3:75178972-75178991 | MS.gene05344:intron | 40.0% | |
| TACTGTTTGCAAGACAGTGA+GGG | + | chr6.3:75177668-75177687 | MS.gene05344:intron | 40.0% | |
| TACTTCTGTAGGTTTCCATG+TGG | + | chr6.3:75179212-75179231 | MS.gene05344:intron | 40.0% | |
| TCAAGATCATCGTAACCTTC+TGG | - | chr6.3:75174317-75174336 | None:intergenic | 40.0% | |
| TCAGGAAACAAGTTCTGTTC+CGG | + | chr6.3:75179644-75179663 | MS.gene05344:intron | 40.0% | |
| TCAGTCTTCTATCCAGAAGT+TGG | + | chr6.3:75178827-75178846 | MS.gene05344:intron | 40.0% | |
| TCCATAAGCTTGTCAAGCAT+TGG | - | chr6.3:75178655-75178674 | None:intergenic | 40.0% | |
| TCCCAACTTTGTCTCAATGA+AGG | - | chr6.3:75178063-75178082 | None:intergenic | 40.0% | |
| TCTGAGTCTGCAAATAGCAT+TGG | - | chr6.3:75177238-75177257 | None:intergenic | 40.0% | |
| TGAATGCAACCGCATGAAAA+TGG | + | chr6.3:75180049-75180068 | MS.gene05344:CDS | 40.0% | |
| TGCAACAACTCACAAAACTC+TGG | - | chr6.3:75178396-75178415 | None:intergenic | 40.0% | |
| TGGAAAACTTGTGCTGGAAT+TGG | + | chr6.3:75180263-75180282 | MS.gene05344:intron | 40.0% | |
| TTGAGACAAAGTTGGGACTT+GGG | + | chr6.3:75178066-75178085 | MS.gene05344:intron | 40.0% | |
| TTGATCAAGTACCTTCCAAG+TGG | + | chr6.3:75175086-75175105 | MS.gene05344:intron | 40.0% | |
| TTTCATAAGTCCTCCCAAAC+AGG | + | chr6.3:75174905-75174924 | MS.gene05344:intron | 40.0% | |
| TTTCTCCAACGAGCTGAAAA+TGG | - | chr6.3:75174357-75174376 | None:intergenic | 40.0% | |
| TTTGATTATTCCCATGTCCC+TGG | + | chr6.3:75179790-75179809 | MS.gene05344:CDS | 40.0% | |
| ! | AGATTGTGTTATGTGGTGGA+TGG | + | chr6.3:75176133-75176152 | MS.gene05344:intron | 40.0% |
| ! | AGATTGTTGTTGTGTAGTGG+AGG | + | chr6.3:75176722-75176741 | MS.gene05344:intron | 40.0% |
| ! | ATTACAGGAGTTGATCGCAA+AGG | + | chr6.3:75180479-75180498 | MS.gene05344:intron | 40.0% |
| ! | ATTCCAGCACAAGTTTTCCA+AGG | - | chr6.3:75180263-75180282 | None:intergenic | 40.0% |
| ! | CTGGTTTGTGATCCTTGTTA+GGG | - | chr6.3:75174298-75174317 | None:intergenic | 40.0% |
| ! | GTGAGATTGTTGTTGTGTAG+TGG | + | chr6.3:75176719-75176738 | MS.gene05344:intron | 40.0% |
| ! | GTTGTCGTTCCATTTTCATG+CGG | - | chr6.3:75180061-75180080 | None:intergenic | 40.0% |
| ! | GTTTTGTGAAACTGTTTGGG+AGG | + | chr6.3:75175350-75175369 | MS.gene05344:intron | 40.0% |
| ! | TCTGGTTTGTGATCCTTGTT+AGG | - | chr6.3:75174299-75174318 | None:intergenic | 40.0% |
| ! | TGCTTGGGTAAGGAATTTTC+TGG | + | chr6.3:75179261-75179280 | MS.gene05344:CDS | 40.0% |
| ! | TGGGTAAGGAATTTTCTGGA+GGG | + | chr6.3:75179265-75179284 | MS.gene05344:CDS | 40.0% |
| ! | TTGGGTAAGGAATTTTCTGG+AGG | + | chr6.3:75179264-75179283 | MS.gene05344:CDS | 40.0% |
| !! | GATTGTGTTATGTGGTGGAT+GGG | + | chr6.3:75176134-75176153 | MS.gene05344:intron | 40.0% |
| !! | GTAAGTTTTGTGAGCCTGTT+TGG | - | chr6.3:75174922-75174941 | None:intergenic | 40.0% |
| !! | GTTATTGGGTGTTGATGCAT+CGG | + | chr6.3:75177028-75177047 | MS.gene05344:intron | 40.0% |
| !!! | GACCGATATTTTGATGCTGT+TGG | + | chr6.3:75179119-75179138 | MS.gene05344:intron | 40.0% |
| AACAAGGGTCCTGTTTGGAT+TGG | + | chr6.3:75175700-75175719 | MS.gene05344:intron | 45.0% | |
| ACTATGTTACGCTCTCCACT+TGG | - | chr6.3:75175104-75175123 | None:intergenic | 45.0% | |
| ACTCTGTGACGTTCACCATT+AGG | - | chr6.3:75174458-75174477 | None:intergenic | 45.0% | |
| ACTTCCTTATGTGGTGCAGA+AGG | + | chr6.3:75179881-75179900 | MS.gene05344:CDS | 45.0% | |
| AGGAAACAAGTTCTGTTCCG+GGG | + | chr6.3:75179646-75179665 | MS.gene05344:intron | 45.0% | |
| AGGTTTCCATGTGGATGACT+CGG | + | chr6.3:75179221-75179240 | MS.gene05344:intron | 45.0% | |
| AGTCAACCAGAGGTAAGTCA+TGG | + | chr6.3:75179336-75179355 | MS.gene05344:intron | 45.0% | |
| ATCACCTTCTGCACCACATA+AGG | - | chr6.3:75179888-75179907 | None:intergenic | 45.0% | |
| ATGGTGAACGTCACAGAGTA+TGG | + | chr6.3:75174459-75174478 | MS.gene05344:intron | 45.0% | |
| ATTCGCCATTGTTCCGTTTC+CGG | - | chr6.3:75174252-75174271 | None:intergenic | 45.0% | |
| ATTGGACGTTGATGTGCGTT+TGG | + | chr6.3:75176963-75176982 | MS.gene05344:intron | 45.0% | |
| CAACGTGTCAGTGTCGTATT+CGG | - | chr6.3:75174557-75174576 | None:intergenic | 45.0% | |
| CAACTTGCAAAACACACCTG+AGG | - | chr6.3:75179552-75179571 | None:intergenic | 45.0% | |
| CAATCTCCATGACTTACCTC+TGG | - | chr6.3:75179345-75179364 | None:intergenic | 45.0% | |
| CAATGGCGAATTCGAGAATG+AGG | + | chr6.3:75174261-75174280 | MS.gene05344:CDS | 45.0% | |
| CAGAGGTAAGTCATGGAGAT+TGG | + | chr6.3:75179343-75179362 | MS.gene05344:intron | 45.0% | |
| CAGGAAACAAGTTCTGTTCC+GGG | + | chr6.3:75179645-75179664 | MS.gene05344:intron | 45.0% | |
| CCAAGCCTTACCCAACTAAT+TGG | - | chr6.3:75176051-75176070 | None:intergenic | 45.0% | |
| CCAATTAGTTGGGTAAGGCT+TGG | + | chr6.3:75176048-75176067 | MS.gene05344:intron | 45.0% | |
| CCTGAATGTTTGCTTGGGTA+AGG | + | chr6.3:75179251-75179270 | MS.gene05344:CDS | 45.0% | |
| CCTTACCCAAGCAAACATTC+AGG | - | chr6.3:75179254-75179273 | None:intergenic | 45.0% | |
| CGCTAGATTGTGTTATGTGG+TGG | + | chr6.3:75176129-75176148 | MS.gene05344:intron | 45.0% | |
| CTTACCCAACTAATTGGGGT+CGG | - | chr6.3:75176045-75176064 | None:intergenic | 45.0% | |
| GAACCTTGGAAAACTTGTGC+TGG | + | chr6.3:75180257-75180276 | MS.gene05344:intron | 45.0% | |
| GCAACCTTGGATTCACATCA+TGG | + | chr6.3:75178854-75178873 | MS.gene05344:CDS | 45.0% | |
| GCATGATGCTATAAGTGCCT+GGG | - | chr6.3:75179512-75179531 | None:intergenic | 45.0% | |
| GCTGAGATTGAACCCTAACA+AGG | + | chr6.3:75174283-75174302 | MS.gene05344:CDS | 45.0% | |
| GGAGTCCGTTATTTGAAAGC+AGG | + | chr6.3:75179762-75179781 | MS.gene05344:intron | 45.0% | |
| GGGTGGCTGAAGCAAAATTT+CGG | + | chr6.3:75178569-75178588 | MS.gene05344:CDS | 45.0% | |
| GTAATCACATGTCTCAGTGC+CGG | + | chr6.3:75175249-75175268 | MS.gene05344:intron | 45.0% | |
| GTCTTCTATCCAGAAGTTGG+AGG | + | chr6.3:75178830-75178849 | MS.gene05344:intron | 45.0% | |
| TAAGATCACCACAAGGACAG+CGG | - | chr6.3:75178189-75178208 | None:intergenic | 45.0% | |
| TAGACAAGTAGGTCACAGCA+TGG | + | chr6.3:75177478-75177497 | MS.gene05344:intron | 45.0% | |
| TCCAACGAGCTGAAAATGGA+AGG | - | chr6.3:75174353-75174372 | None:intergenic | 45.0% | |
| TGAGACAAAGTTGGGACTTG+GGG | + | chr6.3:75178067-75178086 | MS.gene05344:intron | 45.0% | |
| TGCATGATGCTATAAGTGCC+TGG | - | chr6.3:75179513-75179532 | None:intergenic | 45.0% | |
| TGTGTACGAAAGGACCTTGA+AGG | - | chr6.3:75178035-75178054 | None:intergenic | 45.0% | |
| TGTTTATCCAAACAGGGCCA+AGG | + | chr6.3:75175905-75175924 | MS.gene05344:intron | 45.0% | |
| TTACTTCCGAGTCATCCACA+TGG | - | chr6.3:75179230-75179249 | None:intergenic | 45.0% | |
| TTGGTTAAGCACCTTCCAAG+TGG | + | chr6.3:75175593-75175612 | MS.gene05344:intron | 45.0% | |
| TTGTGAGTTGTTGCAAGCTG+AGG | + | chr6.3:75178401-75178420 | MS.gene05344:CDS | 45.0% | |
| TTTGCAGTCGAGATTTCGCT+AGG | - | chr6.3:75177786-75177805 | None:intergenic | 45.0% | |
| ! | CTCAGGTGTGTTTTGCAAGT+TGG | + | chr6.3:75179550-75179569 | MS.gene05344:intron | 45.0% |
| ! | CTTGGTTTGATTACCAACCC+AGG | + | chr6.3:75179492-75179511 | MS.gene05344:intron | 45.0% |
| ! | GCACTGATACTTCTGACTGA+AGG | - | chr6.3:75176287-75176306 | None:intergenic | 45.0% |
| ! | GGTGCTGTACTTGATGACTT+TGG | + | chr6.3:75178622-75178641 | MS.gene05344:CDS | 45.0% |
| ! | GTGTATGCTGACTGTACAGA+GGG | + | chr6.3:75177554-75177573 | MS.gene05344:intron | 45.0% |
| ! | TCCTTCCATTTTCAGCTCGT+TGG | + | chr6.3:75174349-75174368 | MS.gene05344:CDS | 45.0% |
| !! | GCTTGTCAAGCATTGGTTCT+AGG | - | chr6.3:75178648-75178667 | None:intergenic | 45.0% |
| !! | GGGTAAGGAATTTTCTGGAG+GGG | + | chr6.3:75179266-75179285 | MS.gene05344:CDS | 45.0% |
| !! | GTGTAGTGGAGGAGTATTCA+TGG | + | chr6.3:75176733-75176752 | MS.gene05344:intron | 45.0% |
| !! | TCAGTCAGAAGTATCAGTGC+TGG | + | chr6.3:75176287-75176306 | MS.gene05344:intron | 45.0% |
| !!! | TATGCTCGTTTTTTCGCGTG+AGG | + | chr6.3:75174391-75174410 | MS.gene05344:CDS | 45.0% |
| !!! | ATCATAATTTTTTAAATTTT+GGG | + | chr6.3:75176404-75176423 | MS.gene05344:intron | 5.0% |
| !!! | TTATTTTTTTTTTAATTTTG+GGG | + | chr6.3:75175968-75175987 | MS.gene05344:intron | 5.0% |
| AAGGATTTCTCCAGCTGGTG+TGG | + | chr6.3:75180026-75180045 | MS.gene05344:CDS | 50.0% | |
| AAGGTTGCTCCTCCAACTTC+TGG | - | chr6.3:75178842-75178861 | None:intergenic | 50.0% | |
| ACGAAAGGACCTTGAAGGAG+AGG | - | chr6.3:75178030-75178049 | None:intergenic | 50.0% | |
| ACTAATTGGGGTCGGCTACA+TGG | - | chr6.3:75176037-75176056 | None:intergenic | 50.0% | |
| AGAAGTTGGAGGAGCAACCT+TGG | + | chr6.3:75178841-75178860 | MS.gene05344:CDS | 50.0% | |
| AGCCCTCTTCTGTACACATC+TGG | - | chr6.3:75178977-75178996 | None:intergenic | 50.0% | |
| CAATCTGGTAGCAGCACATG+TGG | - | chr6.3:75180087-75180106 | None:intergenic | 50.0% | |
| CATTGTTCCGTTTCCGGTTG+CGG | - | chr6.3:75174246-75174265 | None:intergenic | 50.0% | |
| CGACACTGACACGTTGATAC+CGG | + | chr6.3:75174561-75174580 | MS.gene05344:intron | 50.0% | |
| CGACCCCAATTAGTTGGGTA+AGG | + | chr6.3:75176043-75176062 | MS.gene05344:intron | 50.0% | |
| CGCAAAGGAAGGAGAATCCA+CGG | + | chr6.3:75180494-75180513 | MS.gene05344:CDS | 50.0% | |
| GAATGTGTGTGTCCCATGTC+CGG | - | chr6.3:75175271-75175290 | None:intergenic | 50.0% | |
| GAGACAAAGTTGGGACTTGG+GGG | + | chr6.3:75178068-75178087 | MS.gene05344:intron | 50.0% | |
| GATGCTATAAGTGCCTGGGT+TGG | - | chr6.3:75179508-75179527 | None:intergenic | 50.0% | |
| GGAAACAAGTTCTGTTCCGG+GGG | + | chr6.3:75179647-75179666 | MS.gene05344:intron | 50.0% | |
| GGGTTATCTCCTCTCCTTCA+AGG | + | chr6.3:75178018-75178037 | MS.gene05344:intron | 50.0% | |
| GTAGCCGACCCCAATTAGTT+GGG | + | chr6.3:75176038-75176057 | MS.gene05344:intron | 50.0% | |
| GTCGGCACAAAGAATGCAGT+AGG | - | chr6.3:75178279-75178298 | None:intergenic | 50.0% | |
| GTGCTAGAGCGACAACTTCT+GGG | + | chr6.3:75179848-75179867 | MS.gene05344:CDS | 50.0% | |
| TGCAAGACAGTGAGGGATGA+GGG | + | chr6.3:75177675-75177694 | MS.gene05344:intron | 50.0% | |
| TGTAGCCGACCCCAATTAGT+TGG | + | chr6.3:75176037-75176056 | MS.gene05344:intron | 50.0% | |
| TGTTACGCTCTCCACTTGGA+AGG | - | chr6.3:75175100-75175119 | None:intergenic | 50.0% | |
| TTGCAAGACAGTGAGGGATG+AGG | + | chr6.3:75177674-75177693 | MS.gene05344:intron | 50.0% | |
| TTGTCGCTCTAGCACCATGA+CGG | - | chr6.3:75179843-75179862 | None:intergenic | 50.0% | |
| ! | CACATGTGCTGCTACCAGAT+TGG | + | chr6.3:75180085-75180104 | MS.gene05344:CDS | 50.0% |
| ! | CAGGAGTTGATCGCAAAGGA+AGG | + | chr6.3:75180483-75180502 | MS.gene05344:intron | 50.0% |
| ! | GAAGGACTGGTGTGTACGAA+AGG | - | chr6.3:75178045-75178064 | None:intergenic | 50.0% |
| ! | GGTGTATGCTGACTGTACAG+AGG | + | chr6.3:75177553-75177572 | MS.gene05344:intron | 50.0% |
| ! | GTTTTGTGAGCCTGTTTGGG+AGG | - | chr6.3:75174918-75174937 | None:intergenic | 50.0% |
| !! | ACATGTCTCGGTGTCGACAA+AGG | + | chr6.3:75174620-75174639 | MS.gene05344:intron | 50.0% |
| !!! | GGAGGGGAGTTGTTTTTTCG+AGG | + | chr6.3:75179282-75179301 | MS.gene05344:CDS | 50.0% |
| AGTAGGTCACAGCATGGAGC+TGG | + | chr6.3:75177484-75177503 | MS.gene05344:intron | 55.0% | |
| CAAACAGGGCCAAGGTGAGA+GGG | + | chr6.3:75175913-75175932 | MS.gene05344:intron | 55.0% | |
| CGCAACCGGAAACGGAACAA+TGG | + | chr6.3:75174244-75174263 | MS.gene05344:CDS | 55.0% | |
| GATGAAGCACAGCTCGTCCA+GGG | - | chr6.3:75179810-75179829 | None:intergenic | 55.0% | |
| GGTGCTAGAGCGACAACTTC+TGG | + | chr6.3:75179847-75179866 | MS.gene05344:CDS | 55.0% | |
| GTTGCATTCACCACACCAGC+TGG | - | chr6.3:75180039-75180058 | None:intergenic | 55.0% | |
| TTGTGAAGCCGCTGTCCTTG+TGG | + | chr6.3:75178178-75178197 | MS.gene05344:intron | 55.0% | |
| ! | ACATGTCTCAGTGCCGGACA+TGG | + | chr6.3:75175255-75175274 | MS.gene05344:intron | 55.0% |
| ! | CATGTCTCAGTGCCGGACAT+GGG | + | chr6.3:75175256-75175275 | MS.gene05344:intron | 55.0% |
| CACAGCTCGTCCAGGGACAT+GGG | - | chr6.3:75179803-75179822 | None:intergenic | 60.0% | |
| CATCGTGGTCGACACCGTCA+TGG | + | chr6.3:75179826-75179845 | MS.gene05344:CDS | 60.0% | |
| CCAAACAGGGCCAAGGTGAG+AGG | + | chr6.3:75175912-75175931 | MS.gene05344:intron | 60.0% | |
| CCTCTCACCTTGGCCCTGTT+TGG | - | chr6.3:75175915-75175934 | None:intergenic | 60.0% | |
| CGATGAAGCACAGCTCGTCC+AGG | - | chr6.3:75179811-75179830 | None:intergenic | 60.0% | |
| GGACGAGCTGTGCTTCATCG+TGG | + | chr6.3:75179811-75179830 | MS.gene05344:CDS | 60.0% | |
| TCCACCACCGCAACCGGAAA+CGG | + | chr6.3:75174236-75174255 | MS.gene05344:CDS | 60.0% | |
| TGGTGGAATCGCCACCGTGT+GGG | - | chr6.3:75174223-75174242 | None:intergenic | 60.0% | |
| TGTTCCGTTTCCGGTTGCGG+TGG | - | chr6.3:75174243-75174262 | None:intergenic | 60.0% | |
| GCACAGCTCGTCCAGGGACA+TGG | - | chr6.3:75179804-75179823 | None:intergenic | 65.0% | |
| GGCGATTCCACCACCGCAAC+CGG | + | chr6.3:75174230-75174249 | MS.gene05344:CDS | 65.0% | |
| GGTGGAATCGCCACCGTGTG+GGG | - | chr6.3:75174222-75174241 | None:intergenic | 65.0% | |
| GTGGAATCGCCACCGTGTGG+GGG | - | chr6.3:75174221-75174240 | None:intergenic | 65.0% | |
| TCCGTTTCCGGTTGCGGTGG+TGG | - | chr6.3:75174240-75174259 | None:intergenic | 65.0% | |
| ! | GTGGTGGAATCGCCACCGTG+TGG | - | chr6.3:75174224-75174243 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 75174215 | 75180521 | 75174215 | ID=MS.gene05344 |
| chr6.3 | mRNA | 75174215 | 75180521 | 75174215 | ID=MS.gene05344.t1;Parent=MS.gene05344 |
| chr6.3 | exon | 75174215 | 75174475 | 75174215 | ID=MS.gene05344.t1.exon1;Parent=MS.gene05344.t1 |
| chr6.3 | CDS | 75174215 | 75174475 | 75174215 | ID=cds.MS.gene05344.t1;Parent=MS.gene05344.t1 |
| chr6.3 | exon | 75177251 | 75177298 | 75177251 | ID=MS.gene05344.t1.exon2;Parent=MS.gene05344.t1 |
| chr6.3 | CDS | 75177251 | 75177298 | 75177251 | ID=cds.MS.gene05344.t1;Parent=MS.gene05344.t1 |
| chr6.3 | exon | 75178246 | 75178422 | 75178246 | ID=MS.gene05344.t1.exon3;Parent=MS.gene05344.t1 |
| chr6.3 | CDS | 75178246 | 75178422 | 75178246 | ID=cds.MS.gene05344.t1;Parent=MS.gene05344.t1 |
| chr6.3 | exon | 75178550 | 75178700 | 75178550 | ID=MS.gene05344.t1.exon4;Parent=MS.gene05344.t1 |
| chr6.3 | CDS | 75178550 | 75178700 | 75178550 | ID=cds.MS.gene05344.t1;Parent=MS.gene05344.t1 |
| chr6.3 | exon | 75178831 | 75178917 | 75178831 | ID=MS.gene05344.t1.exon5;Parent=MS.gene05344.t1 |
| chr6.3 | CDS | 75178831 | 75178917 | 75178831 | ID=cds.MS.gene05344.t1;Parent=MS.gene05344.t1 |
| chr6.3 | exon | 75179223 | 75179347 | 75179223 | ID=MS.gene05344.t1.exon6;Parent=MS.gene05344.t1 |
| chr6.3 | CDS | 75179223 | 75179347 | 75179223 | ID=cds.MS.gene05344.t1;Parent=MS.gene05344.t1 |
| chr6.3 | exon | 75179784 | 75179902 | 75179784 | ID=MS.gene05344.t1.exon7;Parent=MS.gene05344.t1 |
| chr6.3 | CDS | 75179784 | 75179902 | 75179784 | ID=cds.MS.gene05344.t1;Parent=MS.gene05344.t1 |
| chr6.3 | exon | 75179995 | 75180106 | 75179995 | ID=MS.gene05344.t1.exon8;Parent=MS.gene05344.t1 |
| chr6.3 | CDS | 75179995 | 75180106 | 75179995 | ID=cds.MS.gene05344.t1;Parent=MS.gene05344.t1 |
| chr6.3 | exon | 75180486 | 75180521 | 75180486 | ID=MS.gene05344.t1.exon9;Parent=MS.gene05344.t1 |
| chr6.3 | CDS | 75180486 | 75180521 | 75180486 | ID=cds.MS.gene05344.t1;Parent=MS.gene05344.t1 |
| Gene Sequence |
| Protein sequence |
