Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059360.t1 | XP_013455640.1 | 77.3 | 128 | 6 | 2 | 1 | 128 | 1 | 105 | 1.50E-45 | 192.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059360.t1 | Q940X7 | 70.5 | 129 | 14 | 3 | 1 | 128 | 1 | 106 | 6.5e-42 | 171.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059360.t1 | I3T5Z4 | 77.3 | 128 | 6 | 2 | 1 | 128 | 1 | 105 | 1.1e-45 | 192.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050317 | MS.gene059360 | 0.824276 | 8.81E-54 | -1.69E-46 |
| MS.gene051245 | MS.gene059360 | 0.807759 | 4.32E-50 | -1.69E-46 |
| MS.gene051343 | MS.gene059360 | 0.806614 | 7.55E-50 | -1.69E-46 |
| MS.gene051452 | MS.gene059360 | 0.808571 | 2.90E-50 | -1.69E-46 |
| MS.gene051757 | MS.gene059360 | 0.814491 | 1.50E-51 | -1.69E-46 |
| MS.gene051975 | MS.gene059360 | 0.831601 | 1.52E-55 | -1.69E-46 |
| MS.gene052434 | MS.gene059360 | 0.821118 | 4.79E-53 | -1.69E-46 |
| MS.gene053381 | MS.gene059360 | 0.822579 | 2.20E-53 | -1.69E-46 |
| MS.gene05344 | MS.gene059360 | -0.804822 | 1.80E-49 | -1.69E-46 |
| MS.gene05469 | MS.gene059360 | 0.804025 | 2.63E-49 | -1.69E-46 |
| MS.gene055311 | MS.gene059360 | 0.819903 | 9.09E-53 | -1.69E-46 |
| MS.gene055603 | MS.gene059360 | 0.803194 | 3.92E-49 | -1.69E-46 |
| MS.gene056787 | MS.gene059360 | 0.832209 | 1.08E-55 | -1.69E-46 |
| MS.gene056986 | MS.gene059360 | 0.850513 | 1.62E-60 | -1.69E-46 |
| MS.gene057055 | MS.gene059360 | 0.804185 | 2.44E-49 | -1.69E-46 |
| MS.gene057999 | MS.gene059360 | 0.812241 | 4.68E-51 | -1.69E-46 |
| MS.gene058238 | MS.gene059360 | 0.808571 | 2.90E-50 | -1.69E-46 |
| MS.gene059050 | MS.gene059360 | 0.808906 | 2.46E-50 | -1.69E-46 |
| MS.gene059360 | MS.gene059830 | 0.808816 | 2.57E-50 | -1.69E-46 |
| MS.gene059360 | MS.gene06010 | 0.841776 | 3.87E-58 | -1.69E-46 |
| MS.gene059360 | MS.gene06011 | 0.825328 | 4.98E-54 | -1.69E-46 |
| MS.gene059360 | MS.gene06131 | 0.829093 | 6.24E-55 | -1.69E-46 |
| MS.gene059360 | MS.gene061958 | 0.866231 | 3.32E-65 | -1.69E-46 |
| MS.gene059360 | MS.gene062117 | 0.807722 | 4.40E-50 | -1.69E-46 |
| MS.gene059360 | MS.gene062292 | 0.823224 | 1.55E-53 | -1.69E-46 |
| MS.gene059360 | MS.gene062770 | 0.816959 | 4.23E-52 | -1.69E-46 |
| MS.gene059360 | MS.gene063636 | 0.831492 | 1.62E-55 | -1.69E-46 |
| MS.gene059360 | MS.gene064717 | 0.804031 | 2.63E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene065504 | 0.82201 | 2.98E-53 | -1.69E-46 |
| MS.gene059360 | MS.gene065934 | 0.802647 | 5.08E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene066221 | 0.804295 | 2.31E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene066427 | 0.82754 | 1.48E-54 | -1.69E-46 |
| MS.gene059360 | MS.gene067571 | 0.800271 | 1.56E-48 | -1.69E-46 |
| MS.gene059360 | MS.gene067857 | 0.804529 | 2.07E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene068164 | 0.812789 | 3.55E-51 | -1.69E-46 |
| MS.gene059360 | MS.gene068166 | 0.823114 | 1.65E-53 | -1.69E-46 |
| MS.gene059360 | MS.gene068752 | 0.824862 | 6.41E-54 | -1.69E-46 |
| MS.gene059360 | MS.gene069002 | 0.847966 | 8.28E-60 | -1.69E-46 |
| MS.gene059360 | MS.gene069065 | 0.81789 | 2.61E-52 | -1.69E-46 |
| MS.gene059360 | MS.gene069199 | 0.80758 | 4.72E-50 | -1.69E-46 |
| MS.gene059360 | MS.gene069225 | 0.801256 | 9.81E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene06989 | 0.803632 | 3.18E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene070222 | 0.833123 | 6.39E-56 | -1.69E-46 |
| MS.gene059360 | MS.gene070671 | 0.800816 | 1.21E-48 | -1.69E-46 |
| MS.gene059360 | MS.gene072328 | 0.807435 | 5.06E-50 | -1.69E-46 |
| MS.gene059360 | MS.gene072329 | 0.801605 | 8.32E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene072969 | 0.811053 | 8.49E-51 | -1.69E-46 |
| MS.gene059360 | MS.gene07339 | 0.828051 | 1.11E-54 | -1.69E-46 |
| MS.gene059360 | MS.gene074369 | 0.829931 | 3.91E-55 | -1.69E-46 |
| MS.gene059360 | MS.gene08767 | 0.816437 | 5.53E-52 | -1.69E-46 |
| MS.gene059360 | MS.gene08793 | 0.818003 | 2.46E-52 | -1.69E-46 |
| MS.gene059360 | MS.gene08889 | 0.808817 | 2.57E-50 | -1.69E-46 |
| MS.gene059360 | MS.gene08922 | 0.808267 | 3.37E-50 | -1.69E-46 |
| MS.gene059360 | MS.gene09297 | 0.812938 | 3.29E-51 | -1.69E-46 |
| MS.gene059360 | MS.gene20430 | 0.806307 | 8.76E-50 | -1.69E-46 |
| MS.gene059360 | MS.gene20886 | 0.826509 | 2.61E-54 | -1.69E-46 |
| MS.gene059360 | MS.gene22968 | 0.802219 | 6.22E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene23464 | 0.80182 | 7.52E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene23484 | 0.805793 | 1.12E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene24413 | 0.812213 | 4.75E-51 | -1.69E-46 |
| MS.gene059360 | MS.gene25942 | 0.828239 | 1.00E-54 | -1.69E-46 |
| MS.gene059360 | MS.gene26288 | 0.807299 | 5.41E-50 | -1.69E-46 |
| MS.gene059360 | MS.gene26584 | 0.827216 | 1.77E-54 | -1.69E-46 |
| MS.gene059360 | MS.gene27865 | -0.803267 | 3.78E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene29047 | 0.824143 | 9.47E-54 | -1.69E-46 |
| MS.gene059360 | MS.gene29109 | 0.816963 | 4.22E-52 | -1.69E-46 |
| MS.gene059360 | MS.gene29209 | 0.802367 | 5.80E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene29719 | 0.845162 | 4.82E-59 | -1.69E-46 |
| MS.gene059360 | MS.gene31625 | 0.802936 | 4.43E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene31862 | 0.822478 | 2.32E-53 | -1.69E-46 |
| MS.gene059360 | MS.gene32193 | 0.80717 | 5.76E-50 | -1.69E-46 |
| MS.gene059360 | MS.gene32863 | 0.806386 | 8.44E-50 | -1.69E-46 |
| MS.gene059360 | MS.gene33735 | 0.822456 | 2.35E-53 | -1.69E-46 |
| MS.gene059360 | MS.gene34925 | 0.801861 | 7.37E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene35034 | 0.81863 | 1.77E-52 | -1.69E-46 |
| MS.gene059360 | MS.gene37468 | 0.812356 | 4.42E-51 | -1.69E-46 |
| MS.gene059360 | MS.gene39222 | 0.825846 | 3.75E-54 | -1.69E-46 |
| MS.gene059360 | MS.gene39572 | 0.819413 | 1.18E-52 | -1.69E-46 |
| MS.gene059360 | MS.gene40918 | 0.83505 | 2.10E-56 | -1.69E-46 |
| MS.gene059360 | MS.gene40991 | 0.802827 | 4.66E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene41775 | 0.804961 | 1.68E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene42295 | 0.8357 | 1.44E-56 | -1.69E-46 |
| MS.gene059360 | MS.gene44260 | 0.821168 | 4.66E-53 | -1.69E-46 |
| MS.gene059360 | MS.gene45374 | 0.825283 | 5.10E-54 | -1.69E-46 |
| MS.gene059360 | MS.gene46355 | 0.814339 | 1.62E-51 | -1.69E-46 |
| MS.gene059360 | MS.gene46392 | 0.810034 | 1.41E-50 | -1.69E-46 |
| MS.gene059360 | MS.gene46447 | 0.800276 | 1.55E-48 | -1.69E-46 |
| MS.gene059360 | MS.gene47311 | 0.800586 | 1.34E-48 | -1.69E-46 |
| MS.gene059360 | MS.gene47531 | 0.813319 | 2.72E-51 | -1.69E-46 |
| MS.gene059360 | MS.gene47995 | 0.814175 | 1.76E-51 | -1.69E-46 |
| MS.gene059360 | MS.gene48256 | 0.801141 | 1.04E-48 | -1.69E-46 |
| MS.gene059360 | MS.gene48283 | 0.84897 | 4.37E-60 | -1.69E-46 |
| MS.gene059360 | MS.gene49772 | 0.81253 | 4.05E-51 | -1.69E-46 |
| MS.gene059360 | MS.gene49816 | 0.828115 | 1.08E-54 | -1.69E-46 |
| MS.gene059360 | MS.gene51111 | 0.831319 | 1.79E-55 | -1.69E-46 |
| MS.gene059360 | MS.gene51557 | 0.845461 | 4.00E-59 | -1.69E-46 |
| MS.gene059360 | MS.gene51920 | 0.82627 | 2.97E-54 | -1.69E-46 |
| MS.gene059360 | MS.gene52281 | 0.817584 | 3.06E-52 | -1.69E-46 |
| MS.gene059360 | MS.gene53070 | 0.839133 | 1.90E-57 | -1.69E-46 |
| MS.gene059360 | MS.gene54163 | 0.800885 | 1.17E-48 | -1.69E-46 |
| MS.gene059360 | MS.gene54299 | 0.833179 | 6.19E-56 | -1.69E-46 |
| MS.gene059360 | MS.gene54766 | 0.805141 | 1.54E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene55282 | 0.813012 | 3.18E-51 | -1.69E-46 |
| MS.gene059360 | MS.gene56132 | 0.812942 | 3.29E-51 | -1.69E-46 |
| MS.gene059360 | MS.gene56178 | 0.809471 | 1.86E-50 | -1.69E-46 |
| MS.gene059360 | MS.gene57847 | 0.832636 | 8.44E-56 | -1.69E-46 |
| MS.gene059360 | MS.gene58438 | 0.804922 | 1.71E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene58440 | -0.807832 | 4.17E-50 | -1.69E-46 |
| MS.gene059360 | MS.gene58441 | -0.81003 | 1.41E-50 | -1.69E-46 |
| MS.gene059360 | MS.gene58442 | -0.802506 | 5.43E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene59736 | 0.821352 | 4.23E-53 | -1.69E-46 |
| MS.gene059360 | MS.gene60120 | 0.818279 | 2.13E-52 | -1.69E-46 |
| MS.gene059360 | MS.gene60265 | 0.820121 | 8.11E-53 | -1.69E-46 |
| MS.gene059360 | MS.gene60372 | 0.801388 | 9.22E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene60374 | 0.824609 | 7.36E-54 | -1.69E-46 |
| MS.gene059360 | MS.gene60384 | 0.804291 | 2.32E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene61257 | 0.821017 | 5.05E-53 | -1.69E-46 |
| MS.gene059360 | MS.gene61682 | 0.81659 | 5.11E-52 | -1.69E-46 |
| MS.gene059360 | MS.gene62501 | 0.829947 | 3.87E-55 | -1.69E-46 |
| MS.gene059360 | MS.gene62956 | 0.806345 | 8.61E-50 | -1.69E-46 |
| MS.gene059360 | MS.gene63432 | 0.805775 | 1.13E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene64140 | 0.822464 | 2.34E-53 | -1.69E-46 |
| MS.gene059360 | MS.gene64284 | 0.801225 | 9.96E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene65518 | 0.820146 | 8.00E-53 | -1.69E-46 |
| MS.gene059360 | MS.gene66089 | 0.805023 | 1.63E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene66119 | 0.811447 | 6.97E-51 | -1.69E-46 |
| MS.gene059360 | MS.gene66818 | 0.802058 | 6.72E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene67107 | 0.808224 | 3.44E-50 | -1.69E-46 |
| MS.gene059360 | MS.gene67301 | -0.809093 | 2.24E-50 | -1.69E-46 |
| MS.gene059360 | MS.gene67485 | 0.806997 | 6.27E-50 | -1.69E-46 |
| MS.gene059360 | MS.gene69442 | 0.810599 | 1.06E-50 | -1.69E-46 |
| MS.gene059360 | MS.gene70112 | 0.810614 | 1.06E-50 | -1.69E-46 |
| MS.gene059360 | MS.gene70613 | 0.823287 | 1.50E-53 | -1.69E-46 |
| MS.gene059360 | MS.gene71547 | 0.832574 | 8.74E-56 | -1.69E-46 |
| MS.gene059360 | MS.gene71994 | 0.81498 | 1.17E-51 | -1.69E-46 |
| MS.gene059360 | MS.gene72376 | 0.826312 | 2.91E-54 | -1.69E-46 |
| MS.gene059360 | MS.gene73643 | 0.803864 | 2.84E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene74237 | 0.834148 | 3.54E-56 | -1.69E-46 |
| MS.gene059360 | MS.gene74919 | 0.801219 | 9.98E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene74932 | 0.806946 | 6.43E-50 | -1.69E-46 |
| MS.gene059360 | MS.gene74938 | 0.810886 | 9.22E-51 | -1.69E-46 |
| MS.gene059360 | MS.gene75412 | 0.82493 | 6.18E-54 | -1.69E-46 |
| MS.gene059360 | MS.gene75605 | 0.821217 | 4.54E-53 | -1.69E-46 |
| MS.gene059360 | MS.gene76046 | 0.815759 | 7.84E-52 | -1.69E-46 |
| MS.gene059360 | MS.gene76440 | 0.806348 | 8.59E-50 | -1.69E-46 |
| MS.gene059360 | MS.gene76478 | 0.810857 | 9.36E-51 | -1.69E-46 |
| MS.gene059360 | MS.gene76635 | 0.840458 | 8.59E-58 | -1.69E-46 |
| MS.gene059360 | MS.gene76833 | 0.806832 | 6.79E-50 | -1.69E-46 |
| MS.gene059360 | MS.gene77649 | 0.812322 | 4.49E-51 | -1.69E-46 |
| MS.gene059360 | MS.gene77759 | 0.800382 | 1.48E-48 | -1.69E-46 |
| MS.gene059360 | MS.gene78314 | 0.806702 | 7.23E-50 | -1.69E-46 |
| MS.gene059360 | MS.gene79599 | -0.807435 | 5.06E-50 | -1.69E-46 |
| MS.gene059360 | MS.gene81141 | 0.814914 | 1.21E-51 | -1.69E-46 |
| MS.gene059360 | MS.gene81285 | 0.800857 | 1.18E-48 | -1.69E-46 |
| MS.gene059360 | MS.gene82767 | 0.80352 | 3.35E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene85246 | 0.821801 | 3.33E-53 | -1.69E-46 |
| MS.gene059360 | MS.gene86315 | 0.816835 | 4.51E-52 | -1.69E-46 |
| MS.gene059360 | MS.gene87924 | 0.812228 | 4.71E-51 | -1.69E-46 |
| MS.gene059360 | MS.gene87972 | 0.816286 | 5.98E-52 | -1.69E-46 |
| MS.gene059360 | MS.gene89712 | 0.825671 | 4.13E-54 | -1.69E-46 |
| MS.gene059360 | MS.gene90119 | 0.825926 | 3.59E-54 | -1.69E-46 |
| MS.gene059360 | MS.gene90882 | 0.843833 | 1.10E-58 | -1.69E-46 |
| MS.gene059360 | MS.gene92135 | 0.805642 | 1.21E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene92557 | 0.801609 | 8.31E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene92819 | 0.801231 | 9.93E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene93155 | 0.803501 | 3.38E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene93983 | 0.810496 | 1.12E-50 | -1.69E-46 |
| MS.gene059360 | MS.gene94183 | 0.836251 | 1.04E-56 | -1.69E-46 |
| MS.gene059360 | MS.gene94549 | 0.801211 | 1.00E-48 | -1.69E-46 |
| MS.gene059360 | MS.gene94992 | 0.826824 | 2.19E-54 | -1.69E-46 |
| MS.gene059360 | MS.gene95305 | 0.801666 | 8.09E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene95469 | 0.822687 | 2.07E-53 | -1.69E-46 |
| MS.gene059360 | MS.gene96690 | 0.812109 | 5.00E-51 | -1.69E-46 |
| MS.gene059360 | MS.gene97638 | 0.825271 | 5.13E-54 | -1.69E-46 |
| MS.gene059360 | MS.gene98889 | 0.832244 | 1.06E-55 | -1.69E-46 |
| MS.gene059360 | MS.gene99465 | 0.802906 | 4.49E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene99505 | 0.80802 | 3.80E-50 | -1.69E-46 |
| MS.gene059360 | MS.gene99525 | 0.822536 | 2.25E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059360.t1 | MTR_2g088570 | 72.868 | 129 | 11 | 3 | 1 | 128 | 1 | 106 | 2.35e-57 | 174 |
| MS.gene059360.t1 | MTR_4g046877 | 77.344 | 128 | 6 | 2 | 1 | 128 | 1 | 105 | 1.05e-55 | 169 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059360.t1 | AT5G20570 | 67.883 | 137 | 28 | 3 | 1 | 128 | 1 | 130 | 2.79e-53 | 164 |
| MS.gene059360.t1 | AT5G20570 | 66.197 | 142 | 16 | 4 | 1 | 128 | 1 | 124 | 3.77e-52 | 161 |
| MS.gene059360.t1 | AT5G20570 | 69.767 | 129 | 15 | 3 | 1 | 128 | 1 | 106 | 9.30e-52 | 159 |
| MS.gene059360.t1 | AT3G42830 | 62.791 | 129 | 21 | 4 | 1 | 128 | 1 | 103 | 1.01e-41 | 134 |
Find 36 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCGAAACGTTTGGGTTTCT+TGG | 0.194770 | 4.4:+31758292 | None:intergenic |
| AACGCTGTGCTCTCTGGGCT+TGG | 0.262027 | 4.4:-31758257 | MS.gene059360:CDS |
| ACGCTGTGCTCTCTGGGCTT+GGG | 0.284157 | 4.4:-31758256 | MS.gene059360:CDS |
| CTTCTTGATCTCGAAACGTT+TGG | 0.294811 | 4.4:+31758283 | None:intergenic |
| CGAGGAATGCACTGTTGCTT+GGG | 0.330805 | 4.4:-31757944 | MS.gene059360:CDS |
| TTCTTGATCTCGAAACGTTT+GGG | 0.343122 | 4.4:+31758284 | None:intergenic |
| ACTTCCATTGCATTAGTAGA+TGG | 0.347117 | 4.4:-31754875 | MS.gene059360:CDS |
| AAGTGGAACGCTGTGCTCTC+TGG | 0.347441 | 4.4:-31758263 | MS.gene059360:CDS |
| TATTGAGTGCCAAGCTAATC+AGG | 0.361895 | 4.4:-31757980 | MS.gene059360:CDS |
| CGCTGTGCTCTCTGGGCTTG+GGG | 0.400352 | 4.4:-31758255 | MS.gene059360:CDS |
| CGTTTGGGTTTCTTGGAAGA+AGG | 0.431722 | 4.4:+31758299 | None:intergenic |
| GCGAGGAATGCACTGTTGCT+TGG | 0.445853 | 4.4:-31757945 | MS.gene059360:CDS |
| CTGCTTGAAGGTTCGCCGGC+GGG | 0.446861 | 4.4:+31758332 | None:intergenic |
| GGACCGGCGGCGCTGCTTGA+AGG | 0.448844 | 4.4:+31758320 | None:intergenic |
| GCTTACAGAGATCCATGATA+TGG | 0.449308 | 4.4:+31758092 | None:intergenic |
| GGCGCTGCTTGAAGGTTCGC+CGG | 0.468158 | 4.4:+31758328 | None:intergenic |
| AGTGGAACGCTGTGCTCTCT+GGG | 0.472848 | 4.4:-31758262 | MS.gene059360:CDS |
| GGGTTTCTTGGAAGAAGGAC+CGG | 0.498668 | 4.4:+31758304 | None:intergenic |
| GAACCTTCAAGCAGCGCCGC+CGG | 0.503851 | 4.4:-31758323 | MS.gene059360:CDS |
| ACTCGTCAAGTGTGTCCTCT+TGG | 0.508929 | 4.4:-31754846 | None:intergenic |
| AGAGATCCATGATATGGTTA+CGG | 0.513238 | 4.4:+31758098 | None:intergenic |
| GCATTCCTCGCTAGTAGCAC+TGG | 0.516805 | 4.4:+31757957 | None:intergenic |
| TAGCACTGGCCTGATTAGCT+TGG | 0.542063 | 4.4:+31757971 | None:intergenic |
| AGGTTCGCCGGCGGGAACCA+TGG | 0.551551 | 4.4:+31758340 | None:intergenic |
| GCTGCTTGAAGGTTCGCCGG+CGG | 0.559287 | 4.4:+31758331 | None:intergenic |
| TATTTGCCGTAACCATATCA+TGG | 0.584059 | 4.4:-31758104 | MS.gene059360:CDS |
| GAGGAATGCACTGTTGCTTG+GGG | 0.594397 | 4.4:-31757943 | MS.gene059360:CDS |
| ACTCGATTCCGACGTAACCA+TGG | 0.594615 | 4.4:-31758357 | MS.gene059360:CDS |
| TGAGCCATCTACTAATGCAA+TGG | 0.598687 | 4.4:+31754871 | None:intergenic |
| TGCAATGGAAGTGAAAAGCA+TGG | 0.613228 | 4.4:+31754886 | None:intergenic |
| AACGTTTCGAGATCAAGAAG+TGG | 0.620010 | 4.4:-31758280 | MS.gene059360:CDS |
| GACGTAACCATGGTTCCCGC+CGG | 0.624258 | 4.4:-31758347 | MS.gene059360:CDS |
| TCAGGCCAGTGCTACTAGCG+AGG | 0.640460 | 4.4:-31757962 | MS.gene059360:CDS |
| TTTCTTGGAAGAAGGACCGG+CGG | 0.670628 | 4.4:+31758307 | None:intergenic |
| GGCGGGAACCATGGTTACGT+CGG | 0.675777 | 4.4:+31758349 | None:intergenic |
| AGGAATGCACTGTTGCTTGG+GGG | 0.744253 | 4.4:-31757942 | MS.gene059360:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAGATATAATTTATAAATA+AGG | + | chr4.4:31756433-31756452 | None:intergenic | 10.0% |
| !!! | TATTTTTTTTTATCGTTAAT+CGG | - | chr4.4:31755317-31755336 | MS.gene059360:intron | 10.0% |
| !! | AAAATAAAAAAAAGAGGATT+TGG | + | chr4.4:31755303-31755322 | None:intergenic | 15.0% |
| !! | AAATAAAAAAAAGAGGATTT+GGG | + | chr4.4:31755302-31755321 | None:intergenic | 15.0% |
| !! | AAATAAAATAGATTACATGA+TGG | + | chr4.4:31758051-31758070 | None:intergenic | 15.0% |
| !! | ACATAACTAAATATTGTAAA+AGG | + | chr4.4:31755360-31755379 | None:intergenic | 15.0% |
| !! | ATAAATTATATCTGAATTCA+TGG | - | chr4.4:31756438-31756457 | MS.gene059360:intron | 15.0% |
| !! | ATATATAGTTAAATTCTTGT+GGG | - | chr4.4:31757411-31757430 | MS.gene059360:intron | 15.0% |
| !! | ATTAAGAGTCATATAAAAAA+TGG | + | chr4.4:31756111-31756130 | None:intergenic | 15.0% |
| !! | GAATTTAACTATATATGTAA+TGG | + | chr4.4:31757407-31757426 | None:intergenic | 15.0% |
| !!! | ATGAATTTTTTAACATTCAA+GGG | + | chr4.4:31756156-31756175 | None:intergenic | 15.0% |
| !!! | GCAAAAAATTCATTTTTTTT+AGG | + | chr4.4:31756240-31756259 | None:intergenic | 15.0% |
| !! | AAACAATAATCGTGAAAATT+AGG | + | chr4.4:31755020-31755039 | None:intergenic | 20.0% |
| !! | AACAATAATCGTGAAAATTA+GGG | + | chr4.4:31755019-31755038 | None:intergenic | 20.0% |
| !! | AATTGGAAATAAATTCTTGT+GGG | - | chr4.4:31757378-31757397 | MS.gene059360:intron | 20.0% |
| !! | AGCACTAAATATAAAAAGTA+GGG | + | chr4.4:31757012-31757031 | None:intergenic | 20.0% |
| !! | ATATATGAAAAGTAGATAGT+GGG | - | chr4.4:31758003-31758022 | MS.gene059360:intron | 20.0% |
| !! | CATATATAGTTAAATTCTTG+TGG | - | chr4.4:31757410-31757429 | MS.gene059360:intron | 20.0% |
| !! | CTTTGTAATTTATTGCATTT+GGG | + | chr4.4:31755753-31755772 | None:intergenic | 20.0% |
| !! | TAAATGTAAGTTATTGAGTT+AGG | - | chr4.4:31756644-31756663 | MS.gene059360:intron | 20.0% |
| !! | TAGCACTAAATATAAAAAGT+AGG | + | chr4.4:31757013-31757032 | None:intergenic | 20.0% |
| !! | TATATAGTTAAATTCTTGTG+GGG | - | chr4.4:31757412-31757431 | MS.gene059360:intron | 20.0% |
| !! | TATATATGAAAAGTAGATAG+TGG | - | chr4.4:31758002-31758021 | MS.gene059360:intron | 20.0% |
| !! | TTAGACCTAAATACATATTT+CGG | + | chr4.4:31756705-31756724 | None:intergenic | 20.0% |
| !!! | ATAACTTTTAAGATCTTCAT+TGG | + | chr4.4:31757558-31757577 | None:intergenic | 20.0% |
| !!! | ATATACCAATTTCAAGTAAA+AGG | - | chr4.4:31757181-31757200 | MS.gene059360:intron | 20.0% |
| !!! | ATGAATTTTTTAACACTCAA+GGG | + | chr4.4:31756866-31756885 | None:intergenic | 20.0% |
| !!! | ATGTTAATCTGCTTTTATTA+GGG | - | chr4.4:31755376-31755395 | MS.gene059360:intron | 20.0% |
| !!! | GATGAATTTTTTAACATTCA+AGG | + | chr4.4:31756157-31756176 | None:intergenic | 20.0% |
| !!! | TATGTTAATCTGCTTTTATT+AGG | - | chr4.4:31755375-31755394 | MS.gene059360:intron | 20.0% |
| !!! | TCAGTTGAATTAGTTTTTTA+TGG | - | chr4.4:31756668-31756687 | MS.gene059360:intron | 20.0% |
| !!! | TTTAGTGCTATTTTCTAATT+TGG | - | chr4.4:31757023-31757042 | MS.gene059360:intron | 20.0% |
| ! | AAAATAGATTACATGATGGT+GGG | + | chr4.4:31758047-31758066 | None:intergenic | 25.0% |
| ! | AACAAAAGCAGGAAAAATTT+GGG | + | chr4.4:31756529-31756548 | None:intergenic | 25.0% |
| ! | AAGCAGTTTCATATATCAAT+TGG | - | chr4.4:31757361-31757380 | MS.gene059360:intron | 25.0% |
| ! | AATCTATTGCATTATAGCAA+AGG | + | chr4.4:31756482-31756501 | None:intergenic | 25.0% |
| ! | ACTAGATACTTAGAACTATT+TGG | + | chr4.4:31756179-31756198 | None:intergenic | 25.0% |
| ! | ACTAGTTGATCTTAATCTTA+TGG | - | chr4.4:31757094-31757113 | MS.gene059360:intron | 25.0% |
| ! | ATTGGAAATAAATTCTTGTG+GGG | - | chr4.4:31757379-31757398 | MS.gene059360:intron | 25.0% |
| ! | CAATTATTCGATATTCGTTT+CGG | - | chr4.4:31755180-31755199 | MS.gene059360:intron | 25.0% |
| ! | CAATTGGAAATAAATTCTTG+TGG | - | chr4.4:31757377-31757396 | MS.gene059360:intron | 25.0% |
| ! | CTATAATGCAATAGATTACA+AGG | - | chr4.4:31756485-31756504 | MS.gene059360:intron | 25.0% |
| ! | GATATGTTACAATATTTCCT+CGG | + | chr4.4:31757320-31757339 | None:intergenic | 25.0% |
| ! | GCTTTGTAATTTATTGCATT+TGG | + | chr4.4:31755754-31755773 | None:intergenic | 25.0% |
| ! | TAAAATAGATTACATGATGG+TGG | + | chr4.4:31758048-31758067 | None:intergenic | 25.0% |
| ! | TGTATTTAGGTCTAAACATA+TGG | - | chr4.4:31756710-31756729 | MS.gene059360:intron | 25.0% |
| ! | TTGAGTTCAATAAGCATATT+CGG | + | chr4.4:31758222-31758241 | None:intergenic | 25.0% |
| !! | AATTTCAAGTAAAACTAAGC+CGG | - | chr4.4:31757275-31757294 | MS.gene059360:intron | 25.0% |
| !! | TTAGAGCACTATATATGTAA+TGG | + | chr4.4:31757440-31757459 | None:intergenic | 25.0% |
| !!! | AACATAGATTGCTTTGATTT+TGG | - | chr4.4:31755624-31755643 | MS.gene059360:intron | 25.0% |
| !!! | ATTTTTAACTGCTTTGATCT+TGG | - | chr4.4:31756375-31756394 | MS.gene059360:intron | 25.0% |
| !!! | CGAATATAAGATTTTGAGTT+AGG | - | chr4.4:31755903-31755922 | MS.gene059360:intron | 25.0% |
| !!! | GATGAATTTTTTAACACTCA+AGG | + | chr4.4:31756867-31756886 | None:intergenic | 25.0% |
| !!! | TTGATTTGGATTTTGGTTTT+AGG | - | chr4.4:31755209-31755228 | MS.gene059360:intron | 25.0% |
| AAACATATGGATAAGTTTCC+AGG | - | chr4.4:31756723-31756742 | MS.gene059360:intron | 30.0% | |
| AAATGTCAACTGTGAATGAT+GGG | + | chr4.4:31757869-31757888 | None:intergenic | 30.0% | |
| AACCTACTAACAATCTTACA+TGG | + | chr4.4:31756566-31756585 | None:intergenic | 30.0% | |
| AACTTGTACTGTCTCATTAA+GGG | + | chr4.4:31757827-31757846 | None:intergenic | 30.0% | |
| ACAAGTTTGAAGATTCCATT+TGG | + | chr4.4:31758107-31758126 | None:intergenic | 30.0% | |
| ACTGCTTAAAGTTTAACTCA+TGG | + | chr4.4:31757348-31757367 | None:intergenic | 30.0% | |
| ACTTATAATCACTCCCTTTA+TGG | + | chr4.4:31757618-31757637 | None:intergenic | 30.0% | |
| ATGTAAGATTGTTAGTAGGT+TGG | - | chr4.4:31756565-31756584 | MS.gene059360:intron | 30.0% | |
| ATGTTAATGTGTCATCTCTT+AGG | - | chr4.4:31756289-31756308 | MS.gene059360:intron | 30.0% | |
| CAAAATACATAGAGCTAGTT+AGG | + | chr4.4:31756889-31756908 | None:intergenic | 30.0% | |
| CTGTGTGTATATCTTATACA+GGG | - | chr4.4:31758295-31758314 | MS.gene059360:CDS | 30.0% | |
| CTTATAATCACTCCCTTTAT+GGG | + | chr4.4:31757617-31757636 | None:intergenic | 30.0% | |
| GAAAATTAGGGTTTACGATT+GGG | + | chr4.4:31755007-31755026 | None:intergenic | 30.0% | |
| GAACAAAAGCAGGAAAAATT+TGG | + | chr4.4:31756530-31756549 | None:intergenic | 30.0% | |
| GCTTATTGAACTCAATATGA+AGG | - | chr4.4:31758227-31758246 | MS.gene059360:intron | 30.0% | |
| TAAAAAAACTACCTAGACAG+CGG | + | chr4.4:31755664-31755683 | None:intergenic | 30.0% | |
| TGAAAATTAGGGTTTACGAT+TGG | + | chr4.4:31755008-31755027 | None:intergenic | 30.0% | |
| TGCAATAAATTACAAAGCCA+AGG | - | chr4.4:31755756-31755775 | MS.gene059360:intron | 30.0% | |
| TGCAATAGATTACAAGGAAA+AGG | - | chr4.4:31756491-31756510 | MS.gene059360:intron | 30.0% | |
| TGTGATAGAGAAGTTAGAAA+AGG | - | chr4.4:31756033-31756052 | MS.gene059360:intron | 30.0% | |
| TGTGTGTATATCTTATACAG+GGG | - | chr4.4:31758296-31758315 | MS.gene059360:CDS | 30.0% | |
| TGTTAATGTGTCATCTCTTA+GGG | - | chr4.4:31756290-31756309 | MS.gene059360:intron | 30.0% | |
| TTATAATCACTCCCTTTATG+GGG | + | chr4.4:31757616-31757635 | None:intergenic | 30.0% | |
| TTCCACCGAAATATGTATTT+AGG | - | chr4.4:31756697-31756716 | MS.gene059360:intron | 30.0% | |
| TTTATGCCGGTAAAAACATA+GGG | + | chr4.4:31755534-31755553 | None:intergenic | 30.0% | |
| ! | ATTGGTCTGTGTAAAATTGT+TGG | - | chr4.4:31755822-31755841 | MS.gene059360:intron | 30.0% |
| ! | TAGTAAAGAAGCTTCTGAAA+AGG | - | chr4.4:31756761-31756780 | MS.gene059360:intron | 30.0% |
| ! | TTATTTAGTTTCTGCTTACG+CGG | - | chr4.4:31758251-31758270 | MS.gene059360:CDS | 30.0% |
| !! | ACAATACCCTATGTTTTTAC+CGG | - | chr4.4:31755525-31755544 | MS.gene059360:intron | 30.0% |
| !! | ATAGGGTATTGTGTGTAATT+TGG | + | chr4.4:31755517-31755536 | None:intergenic | 30.0% |
| !! | TTTGCTTTTAAGTGACTAGA+GGG | - | chr4.4:31756255-31756274 | MS.gene059360:intron | 30.0% |
| !! | TTTTGCTTTTAAGTGACTAG+AGG | - | chr4.4:31756254-31756273 | MS.gene059360:intron | 30.0% |
| !!! | ATTTTGAGTTAGGCTTAGTT+TGG | - | chr4.4:31755913-31755932 | MS.gene059360:intron | 30.0% |
| !!! | GGCTTAGTTTTACTTGAAAT+TGG | + | chr4.4:31757276-31757295 | None:intergenic | 30.0% |
| !!! | GTTTGGATTGATTTGGATTT+TGG | - | chr4.4:31755202-31755221 | MS.gene059360:intron | 30.0% |
| AAAAGCAGGAAAAATTTGGG+TGG | + | chr4.4:31756526-31756545 | None:intergenic | 35.0% | |
| AAAGAAATGGAGGACAACAT+TGG | - | chr4.4:31757974-31757993 | MS.gene059360:CDS | 35.0% | |
| AAGGGAGTGATTATAAGTTG+TGG | - | chr4.4:31757620-31757639 | MS.gene059360:intron | 35.0% | |
| AATACTACACAAACAGTACC+AGG | + | chr4.4:31755805-31755824 | None:intergenic | 35.0% | |
| ACAAAAGCTTCCTGAAAAGT+TGG | + | chr4.4:31755575-31755594 | None:intergenic | 35.0% | |
| ACTTCCATTGCATTAGTAGA+TGG | - | chr4.4:31758337-31758356 | MS.gene059360:CDS | 35.0% | |
| ACTTGTACTGTCTCATTAAG+GGG | + | chr4.4:31757826-31757845 | None:intergenic | 35.0% | |
| AGAGATCCATGATATGGTTA+CGG | + | chr4.4:31755117-31755136 | None:intergenic | 35.0% | |
| AGGGAGTGATTATAAGTTGT+GGG | - | chr4.4:31757621-31757640 | MS.gene059360:intron | 35.0% | |
| AGTGTCTTTCATCATGTTAG+AGG | + | chr4.4:31756927-31756946 | None:intergenic | 35.0% | |
| ATACTACACAAACAGTACCA+GGG | + | chr4.4:31755804-31755823 | None:intergenic | 35.0% | |
| ATATGGATAAGTTTCCAGGT+AGG | - | chr4.4:31756727-31756746 | MS.gene059360:intron | 35.0% | |
| ATCATAGCATGAACAAAAGC+AGG | + | chr4.4:31756540-31756559 | None:intergenic | 35.0% | |
| ATCCCTTCCTCAATATGAAA+CGG | + | chr4.4:31757678-31757697 | None:intergenic | 35.0% | |
| ATTCACAGTTGACATTTGGT+GGG | - | chr4.4:31757872-31757891 | MS.gene059360:intron | 35.0% | |
| ATTCGATATTCGTTTCGGTT+TGG | - | chr4.4:31755185-31755204 | MS.gene059360:intron | 35.0% | |
| ATTGGTATATTCTGCACGAT+TGG | + | chr4.4:31757171-31757190 | None:intergenic | 35.0% | |
| CAAATGTCAACTGTGAATGA+TGG | + | chr4.4:31757870-31757889 | None:intergenic | 35.0% | |
| CAACTTGTACTGTCTCATTA+AGG | + | chr4.4:31757828-31757847 | None:intergenic | 35.0% | |
| CAATTAACTAGGGTTTATGC+CGG | + | chr4.4:31755547-31755566 | None:intergenic | 35.0% | |
| CATCATTCACAGTTGACATT+TGG | - | chr4.4:31757868-31757887 | MS.gene059360:intron | 35.0% | |
| GACCTAAATACATATTTCGG+TGG | + | chr4.4:31756702-31756721 | None:intergenic | 35.0% | |
| GCTGTGTGTATATCTTATAC+AGG | - | chr4.4:31758294-31758313 | MS.gene059360:CDS | 35.0% | |
| GCTTAAAGTTTAACTCATGG+TGG | + | chr4.4:31757345-31757364 | None:intergenic | 35.0% | |
| GGAAGCTTCTTAAAAGTTTG+TGG | - | chr4.4:31756054-31756073 | MS.gene059360:intron | 35.0% | |
| GTCTGTGTAAAATTGTTGGT+GGG | - | chr4.4:31755826-31755845 | MS.gene059360:intron | 35.0% | |
| GTTCAGTTCCTTAAACTGAA+GGG | - | chr4.4:31756984-31757003 | MS.gene059360:intron | 35.0% | |
| GTTTATGCCGGTAAAAACAT+AGG | + | chr4.4:31755535-31755554 | None:intergenic | 35.0% | |
| TATGGATAAGTTTCCAGGTA+GGG | - | chr4.4:31756728-31756747 | MS.gene059360:intron | 35.0% | |
| TATTTGCCGTAACCATATCA+TGG | - | chr4.4:31755108-31755127 | MS.gene059360:intron | 35.0% | |
| TCTCCCTTTCACAAAAGAAA+TGG | - | chr4.4:31757961-31757980 | MS.gene059360:CDS | 35.0% | |
| TGCCATGTAAGATTGTTAGT+AGG | - | chr4.4:31756561-31756580 | MS.gene059360:intron | 35.0% | |
| TGGTACTGTTTGTGTAGTAT+TGG | - | chr4.4:31755804-31755823 | MS.gene059360:intron | 35.0% | |
| TGTTCAGTTCCTTAAACTGA+AGG | - | chr4.4:31756983-31757002 | MS.gene059360:intron | 35.0% | |
| TTATGATCTGTGTGAGACAA+AGG | - | chr4.4:31756604-31756623 | MS.gene059360:intron | 35.0% | |
| TTCTTGATCTCGAAACGTTT+GGG | + | chr4.4:31754931-31754950 | None:intergenic | 35.0% | |
| TTGAAGCTAGGTCAAATTCT+AGG | - | chr4.4:31755399-31755418 | MS.gene059360:intron | 35.0% | |
| TTGTGTAGTTCAACATTCCT+TGG | + | chr4.4:31755776-31755795 | None:intergenic | 35.0% | |
| TTTACAATCCTCCCCATAAA+GGG | - | chr4.4:31757602-31757621 | MS.gene059360:intron | 35.0% | |
| ! | AATGATGGGAAATGTCCAAA+GGG | + | chr4.4:31757855-31757874 | None:intergenic | 35.0% |
| ! | AGAAGCTTCTGAAAAGGTTT+AGG | - | chr4.4:31756767-31756786 | MS.gene059360:intron | 35.0% |
| ! | ATTTCTTTTGTGAAAGGGAG+AGG | + | chr4.4:31757962-31757981 | None:intergenic | 35.0% |
| ! | CACTGCCTTTTACTTGAAAT+TGG | + | chr4.4:31757189-31757208 | None:intergenic | 35.0% |
| ! | CCTCCATTTCTTTTGTGAAA+GGG | + | chr4.4:31757967-31757986 | None:intergenic | 35.0% |
| ! | CTTTTATTAGGGTTGAAGCT+AGG | - | chr4.4:31755387-31755406 | MS.gene059360:intron | 35.0% |
| ! | GTACTGTGCTATTACAGTTT+AGG | - | chr4.4:31758157-31758176 | MS.gene059360:intron | 35.0% |
| ! | TAAGATTGTTAGTAGGTTGG+TGG | - | chr4.4:31756568-31756587 | MS.gene059360:intron | 35.0% |
| ! | TAGGTCAAATTCTAGGAATG+AGG | - | chr4.4:31755406-31755425 | MS.gene059360:intron | 35.0% |
| ! | TATTTAGTTTCTGCTTACGC+GGG | - | chr4.4:31758252-31758271 | MS.gene059360:CDS | 35.0% |
| ! | TCCTCCATTTCTTTTGTGAA+AGG | + | chr4.4:31757968-31757987 | None:intergenic | 35.0% |
| ! | TTATAAGTTGTGGGTTTTCG+AGG | - | chr4.4:31757630-31757649 | MS.gene059360:intron | 35.0% |
| !! | CTAGGTCAAATTCTAGGATA+AGG | - | chr4.4:31756319-31756338 | MS.gene059360:intron | 35.0% |
| AAAACAAGGGAGCTGAAAGA+AGG | - | chr4.4:31757903-31757922 | MS.gene059360:CDS | 40.0% | |
| AACGAAAACAACCTACCCTA+TGG | + | chr4.4:31757524-31757543 | None:intergenic | 40.0% | |
| AACGTTTCGAGATCAAGAAG+TGG | - | chr4.4:31754932-31754951 | MS.gene059360:intron | 40.0% | |
| ACGAAAACAACCTACCCTAT+GGG | + | chr4.4:31757523-31757542 | None:intergenic | 40.0% | |
| AGTTGGTCGACCAATTAACT+AGG | + | chr4.4:31755558-31755577 | None:intergenic | 40.0% | |
| AGTTTATGTCTCTACGACGA+TGG | - | chr4.4:31755466-31755485 | MS.gene059360:intron | 40.0% | |
| ATAAGTTTCCAGGTAGGGAT+AGG | - | chr4.4:31756733-31756752 | MS.gene059360:intron | 40.0% | |
| CAAGGAAATATCCACTGTCT+AGG | - | chr4.4:31756401-31756420 | MS.gene059360:intron | 40.0% | |
| CATTAAGGGGTTACCTATCA+AGG | + | chr4.4:31757813-31757832 | None:intergenic | 40.0% | |
| CATTCACAGTTGACATTTGG+TGG | - | chr4.4:31757871-31757890 | MS.gene059360:intron | 40.0% | |
| CATTCTACAAGGGAAAGGAA+AGG | + | chr4.4:31757726-31757745 | None:intergenic | 40.0% | |
| CCCTTTCACAAAAGAAATGG+AGG | - | chr4.4:31757964-31757983 | MS.gene059360:CDS | 40.0% | |
| CGGCATAAACCCTAGTTAAT+TGG | - | chr4.4:31755545-31755564 | MS.gene059360:intron | 40.0% | |
| CTAGTTCATAGGTCCTTGAT+AGG | - | chr4.4:31757797-31757816 | MS.gene059360:intron | 40.0% | |
| CTATCAAGGACCTATGAACT+AGG | + | chr4.4:31757799-31757818 | None:intergenic | 40.0% | |
| CTTCTTGATCTCGAAACGTT+TGG | + | chr4.4:31754932-31754951 | None:intergenic | 40.0% | |
| CTTTACAATCCTCCCCATAA+AGG | - | chr4.4:31757601-31757620 | MS.gene059360:intron | 40.0% | |
| CTTTATGGGGAGGATTGTAA+AGG | + | chr4.4:31757603-31757622 | None:intergenic | 40.0% | |
| CTTTCCTTTCCCTTGTAGAA+TGG | - | chr4.4:31757724-31757743 | MS.gene059360:intron | 40.0% | |
| GAACTAGGAGCAGTACAAAT+GGG | + | chr4.4:31757784-31757803 | None:intergenic | 40.0% | |
| GCTTACAGAGATCCATGATA+TGG | + | chr4.4:31755123-31755142 | None:intergenic | 40.0% | |
| GGAACTGAACAGACAAAAGA+AGG | + | chr4.4:31756974-31756993 | None:intergenic | 40.0% | |
| GGTCTGTGTAAAATTGTTGG+TGG | - | chr4.4:31755825-31755844 | MS.gene059360:intron | 40.0% | |
| GTTGGTCGACCAATTAACTA+GGG | + | chr4.4:31755557-31755576 | None:intergenic | 40.0% | |
| TAAGGATACTACCTAGACAG+TGG | + | chr4.4:31756415-31756434 | None:intergenic | 40.0% | |
| TAAGTTTCCAGGTAGGGATA+GGG | - | chr4.4:31756734-31756753 | MS.gene059360:intron | 40.0% | |
| TACAAGGGAAAGGAAAGGAA+AGG | + | chr4.4:31757721-31757740 | None:intergenic | 40.0% | |
| TATTGAGTGCCAAGCTAATC+AGG | - | chr4.4:31755232-31755251 | MS.gene059360:intron | 40.0% | |
| TCCCGTTTCATATTGAGGAA+GGG | - | chr4.4:31757673-31757692 | MS.gene059360:intron | 40.0% | |
| TCCCTTCCTCAATATGAAAC+GGG | + | chr4.4:31757677-31757696 | None:intergenic | 40.0% | |
| TCTTGCGTGATTCAAACTTG+TGG | - | chr4.4:31755868-31755887 | MS.gene059360:intron | 40.0% | |
| TGAACTACACAAATTCTCCC+TGG | - | chr4.4:31755784-31755803 | MS.gene059360:intron | 40.0% | |
| TGAACTAGGAGCAGTACAAA+TGG | + | chr4.4:31757785-31757804 | None:intergenic | 40.0% | |
| TGAGCCATCTACTAATGCAA+TGG | + | chr4.4:31758344-31758363 | None:intergenic | 40.0% | |
| TGCAATGGAAGTGAAAAGCA+TGG | + | chr4.4:31758329-31758348 | None:intergenic | 40.0% | |
| TGTAAAGGAAGGAAGTGAAC+TGG | + | chr4.4:31757588-31757607 | None:intergenic | 40.0% | |
| TTGTACTGCTCCTAGTTCAT+AGG | - | chr4.4:31757786-31757805 | MS.gene059360:intron | 40.0% | |
| ! | AATTGGTCGACCAACTTTTC+AGG | - | chr4.4:31755562-31755581 | MS.gene059360:intron | 40.0% |
| ! | ATGATGGGAAATGTCCAAAG+GGG | + | chr4.4:31757854-31757873 | None:intergenic | 40.0% |
| ! | GAATGATGGGAAATGTCCAA+AGG | + | chr4.4:31757856-31757875 | None:intergenic | 40.0% |
| ! | GTGGGGCACTTATAAAACAA+GGG | - | chr4.4:31757890-31757909 | MS.gene059360:intron | 40.0% |
| ! | GTTGATGTGGCTTTTTGTGT+TGG | - | chr4.4:31757065-31757084 | MS.gene059360:intron | 40.0% |
| ! | TCTTGTGTGCCATTCTACAA+GGG | + | chr4.4:31757736-31757755 | None:intergenic | 40.0% |
| ! | TTCACAGTTGACATTTGGTG+GGG | - | chr4.4:31757873-31757892 | MS.gene059360:intron | 40.0% |
| !! | CGTTTCGGTTTGGATTGATT+TGG | - | chr4.4:31755195-31755214 | MS.gene059360:intron | 40.0% |
| !! | GATCTTCATTGGCTTCAAAG+TGG | + | chr4.4:31757547-31757566 | None:intergenic | 40.0% |
| !! | TGTAAGTTGATCCTCCATAG+TGG | - | chr4.4:31755697-31755716 | MS.gene059360:intron | 40.0% |
| !! | TTTGTGTCTAGCTCTCCAAA+TGG | - | chr4.4:31758089-31758108 | MS.gene059360:intron | 40.0% |
| AATAGCCTAAGCAGACCCAT+AGG | - | chr4.4:31757505-31757524 | MS.gene059360:intron | 45.0% | |
| ACCTCTCCCGTTTCATATTG+AGG | - | chr4.4:31757668-31757687 | MS.gene059360:intron | 45.0% | |
| ATAGCCTAAGCAGACCCATA+GGG | - | chr4.4:31757506-31757525 | MS.gene059360:intron | 45.0% | |
| ATCTGTGTGAGACAAAGGCA+TGG | - | chr4.4:31756609-31756628 | MS.gene059360:intron | 45.0% | |
| ATGGGGAGGATTGTAAAGGA+AGG | + | chr4.4:31757599-31757618 | None:intergenic | 45.0% | |
| CAAGCAAATATCCGCTGTCT+AGG | - | chr4.4:31755650-31755669 | MS.gene059360:intron | 45.0% | |
| CATCTCTTAGGGTTGAAGCT+AGG | - | chr4.4:31756301-31756320 | MS.gene059360:intron | 45.0% | |
| CGAAGAGTTCGGATTGTATC+CGG | + | chr4.4:31757297-31757316 | None:intergenic | 45.0% | |
| CTCCCGTTTCATATTGAGGA+AGG | - | chr4.4:31757672-31757691 | MS.gene059360:intron | 45.0% | |
| CTGAAAGAAGGCAATCAAGC+TGG | - | chr4.4:31757915-31757934 | MS.gene059360:CDS | 45.0% | |
| GCCACATCAACTTGAAGCAT+TGG | + | chr4.4:31757056-31757075 | None:intergenic | 45.0% | |
| GTAGGGTTCCCTTCAGTTTA+AGG | + | chr4.4:31756995-31757014 | None:intergenic | 45.0% | |
| TAATCACTCCCTTTATGGGG+AGG | + | chr4.4:31757613-31757632 | None:intergenic | 45.0% | |
| TAATCGTGACACAGCCACTA+TGG | + | chr4.4:31755714-31755733 | None:intergenic | 45.0% | |
| TATTTCCTCGGCGAAGAGTT+CGG | + | chr4.4:31757308-31757327 | None:intergenic | 45.0% | |
| TCCTCAATATGAAACGGGAG+AGG | + | chr4.4:31757672-31757691 | None:intergenic | 45.0% | |
| TTATGTCTCTACGACGATGG+TGG | - | chr4.4:31755469-31755488 | MS.gene059360:intron | 45.0% | |
| ! | CGTTTGGGTTTCTTGGAAGA+AGG | + | chr4.4:31754916-31754935 | None:intergenic | 45.0% |
| ! | CTCGAAACGTTTGGGTTTCT+TGG | + | chr4.4:31754923-31754942 | None:intergenic | 45.0% |
| ! | CTCTTGTGTGCCATTCTACA+AGG | + | chr4.4:31757737-31757756 | None:intergenic | 45.0% |
| ! | GGTGGGGCACTTATAAAACA+AGG | - | chr4.4:31757889-31757908 | MS.gene059360:intron | 45.0% |
| ! | TGTGCCATTCTACAAGGGAA+AGG | + | chr4.4:31757731-31757750 | None:intergenic | 45.0% |
| !! | GCCAATGCTTCAAGTTGATG+TGG | - | chr4.4:31757052-31757071 | MS.gene059360:intron | 45.0% |
| !! | TAAAAAAAAATAAAAAAAAG+AGG | + | chr4.4:31755309-31755328 | None:intergenic | 5.0% |
| ACTCGATTCCGACGTAACCA+TGG | - | chr4.4:31754855-31754874 | MS.gene059360:CDS | 50.0% | |
| AGGGAGAGGATTCAAACTCG+TGG | + | chr4.4:31757948-31757967 | None:intergenic | 50.0% | |
| AGTACAAGTTGCCACCCCTT+TGG | - | chr4.4:31757837-31757856 | MS.gene059360:intron | 50.0% | |
| AGTGGGTCCGATTACCAAGT+GGG | - | chr4.4:31758020-31758039 | MS.gene059360:intron | 50.0% | |
| ATGGGAAATGTCCAAAGGGG+TGG | + | chr4.4:31757851-31757870 | None:intergenic | 50.0% | |
| CTAACTTCCCTATCCCTACC+TGG | + | chr4.4:31756744-31756763 | None:intergenic | 50.0% | |
| CTGCTTTGATCTTGGCTGCA+AGG | - | chr4.4:31756383-31756402 | MS.gene059360:intron | 50.0% | |
| GGGTTTCTTGGAAGAAGGAC+CGG | + | chr4.4:31754911-31754930 | None:intergenic | 50.0% | |
| TTTCTTGGAAGAAGGACCGG+CGG | + | chr4.4:31754908-31754927 | None:intergenic | 50.0% | |
| ! | AGGAATGCACTGTTGCTTGG+GGG | - | chr4.4:31755270-31755289 | MS.gene059360:intron | 50.0% |
| ! | CGAGGAATGCACTGTTGCTT+GGG | - | chr4.4:31755268-31755287 | MS.gene059360:intron | 50.0% |
| ! | GAGGAATGCACTGTTGCTTG+GGG | - | chr4.4:31755269-31755288 | MS.gene059360:intron | 50.0% |
| ! | TAGTGGGTCCGATTACCAAG+TGG | - | chr4.4:31758019-31758038 | MS.gene059360:intron | 50.0% |
| !! | TAGCACTGGCCTGATTAGCT+TGG | + | chr4.4:31755244-31755263 | None:intergenic | 50.0% |
| AAGTGGAACGCTGTGCTCTC+TGG | - | chr4.4:31754949-31754968 | MS.gene059360:intron | 55.0% | |
| ACAATCCGAACTCTTCGCCG+AGG | - | chr4.4:31757300-31757319 | MS.gene059360:intron | 55.0% | |
| AGTGGAACGCTGTGCTCTCT+GGG | - | chr4.4:31754950-31754969 | MS.gene059360:intron | 55.0% | |
| CCTAAGCAGACCCATAGGGT+AGG | - | chr4.4:31757510-31757529 | MS.gene059360:intron | 55.0% | |
| CCTACCCTATGGGTCTGCTT+AGG | + | chr4.4:31757513-31757532 | None:intergenic | 55.0% | |
| GCATTCCTCGCTAGTAGCAC+TGG | + | chr4.4:31755258-31755277 | None:intergenic | 55.0% | |
| GCGAGGAATGCACTGTTGCT+TGG | - | chr4.4:31755267-31755286 | MS.gene059360:intron | 55.0% | |
| TCGTGACACAGCCACTATGG+AGG | + | chr4.4:31755711-31755730 | None:intergenic | 55.0% | |
| ! | GGTGGGACCCACTTGGTAAT+CGG | + | chr4.4:31758030-31758049 | None:intergenic | 55.0% |
| !! | ACATGATGGTGGGACCCACT+TGG | + | chr4.4:31758037-31758056 | None:intergenic | 55.0% |
| AACGCTGTGCTCTCTGGGCT+TGG | - | chr4.4:31754955-31754974 | MS.gene059360:intron | 60.0% | |
| ACGCTGTGCTCTCTGGGCTT+GGG | - | chr4.4:31754956-31754975 | MS.gene059360:intron | 60.0% | |
| GACGTAACCATGGTTCCCGC+CGG | - | chr4.4:31754865-31754884 | MS.gene059360:CDS | 60.0% | |
| GGCGGGAACCATGGTTACGT+CGG | + | chr4.4:31754866-31754885 | None:intergenic | 60.0% | |
| ! | TCAGGCCAGTGCTACTAGCG+AGG | - | chr4.4:31755250-31755269 | MS.gene059360:intron | 60.0% |
| CGCTGTGCTCTCTGGGCTTG+GGG | - | chr4.4:31754957-31754976 | MS.gene059360:intron | 65.0% | |
| CTGCTTGAAGGTTCGCCGGC+GGG | + | chr4.4:31754883-31754902 | None:intergenic | 65.0% | |
| GAACCTTCAAGCAGCGCCGC+CGG | - | chr4.4:31754889-31754908 | MS.gene059360:CDS | 65.0% | |
| GCTGCTTGAAGGTTCGCCGG+CGG | + | chr4.4:31754884-31754903 | None:intergenic | 65.0% | |
| GGCGCTGCTTGAAGGTTCGC+CGG | + | chr4.4:31754887-31754906 | None:intergenic | 65.0% | |
| AGGTTCGCCGGCGGGAACCA+TGG | + | chr4.4:31754875-31754894 | None:intergenic | 70.0% | |
| GGACCGGCGGCGCTGCTTGA+AGG | + | chr4.4:31754895-31754914 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 31754847 | 31758387 | 31754847 | ID=MS.gene059360 |
| chr4.4 | mRNA | 31754847 | 31758387 | 31754847 | ID=MS.gene059360.t1;Parent=MS.gene059360 |
| chr4.4 | exon | 31758234 | 31758387 | 31758234 | ID=MS.gene059360.t1.exon1;Parent=MS.gene059360.t1 |
| chr4.4 | CDS | 31758234 | 31758387 | 31758234 | ID=cds.MS.gene059360.t1;Parent=MS.gene059360.t1 |
| chr4.4 | exon | 31758098 | 31758148 | 31758098 | ID=MS.gene059360.t1.exon2;Parent=MS.gene059360.t1 |
| chr4.4 | CDS | 31758098 | 31758148 | 31758098 | ID=cds.MS.gene059360.t1;Parent=MS.gene059360.t1 |
| chr4.4 | exon | 31757896 | 31758003 | 31757896 | ID=MS.gene059360.t1.exon3;Parent=MS.gene059360.t1 |
| chr4.4 | CDS | 31757896 | 31758003 | 31757896 | ID=cds.MS.gene059360.t1;Parent=MS.gene059360.t1 |
| chr4.4 | exon | 31754847 | 31754918 | 31754847 | ID=MS.gene059360.t1.exon4;Parent=MS.gene059360.t1 |
| chr4.4 | CDS | 31754847 | 31754918 | 31754847 | ID=cds.MS.gene059360.t1;Parent=MS.gene059360.t1 |
| Gene Sequence |
| Protein sequence |
