AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene82596

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene82596.t1 MTR_3g048950 97.638 508 12 0 1 508 1 508 0.0 1010
MS.gene82596.t1 MTR_2g010180 33.556 450 252 12 90 529 179 591 7.62e-47 172
MS.gene82596.t1 MTR_3g096980 32.018 456 251 13 78 515 174 588 4.45e-46 171
MS.gene82596.t1 MTR_2g010180 33.630 449 250 12 90 527 193 604 7.07e-46 170
MS.gene82596.t1 MTR_2g010180 33.630 449 250 12 90 527 179 590 8.83e-46 170
MS.gene82596.t1 MTR_8g094740 31.390 446 254 12 85 515 181 589 3.86e-41 157
MS.gene82596.t1 MTR_8g080890 33.935 277 174 5 46 316 45 318 2.31e-36 142
MS.gene82596.t1 MTR_8g080870 34.444 270 166 5 46 308 15 280 2.34e-34 135
MS.gene82596.t1 MTR_8g094740 30.848 389 234 8 85 472 181 535 2.54e-34 136
MS.gene82596.t1 MTR_8g080840 29.851 335 216 6 46 364 44 375 1.06e-33 134
MS.gene82596.t1 MTR_8g080880 33.094 278 175 5 46 316 44 317 6.52e-33 132
MS.gene82596.t1 MTR_8g097220 30.719 306 194 6 17 316 21 314 1.05e-32 131
MS.gene82596.t1 MTR_4g074030 33.453 278 176 5 37 308 29 303 5.97e-32 129
MS.gene82596.t1 MTR_8g095600 31.020 245 153 4 43 282 163 396 4.34e-30 124
MS.gene82596.t1 MTR_8g095600 31.020 245 153 4 43 282 163 396 1.76e-29 122
MS.gene82596.t1 MTR_8g095600 31.020 245 153 4 43 282 163 396 1.77e-29 122
MS.gene82596.t1 MTR_8g095600 31.020 245 153 4 43 282 179 412 1.88e-29 123
MS.gene82596.t1 MTR_1g082750 46.429 112 60 0 141 252 63 174 7.39e-23 101
MS.gene82596.t1 MTR_4g094205 45.631 103 56 0 151 253 119 221 2.82e-19 91.7
MS.gene82596.t1 MTR_8g107280 41.818 110 64 0 143 252 101 210 5.60e-12 68.6
MS.gene82596.t1 MTR_8g107280 41.441 111 65 0 143 253 101 211 6.55e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene82596.t1 AT3G25660 73.973 511 126 3 3 508 1 509 0.0 735
MS.gene82596.t1 AT5G64440 29.680 438 259 10 85 508 175 577 5.88e-44 164
MS.gene82596.t1 AT4G34880 27.572 486 290 14 43 508 45 488 8.37e-28 117
MS.gene82596.t1 AT5G07360 29.876 241 155 3 43 278 205 436 2.63e-27 116
MS.gene82596.t1 AT5G07360 29.876 241 155 3 43 278 205 436 2.63e-27 116
MS.gene82596.t1 AT5G07360 29.876 241 148 4 43 278 205 429 1.15e-25 111
MS.gene82596.t1 AT1G08980 45.299 117 64 0 141 257 64 180 3.44e-22 99.4
MS.gene82596.t1 AT5G09420 35.260 173 106 3 141 313 107 273 2.22e-19 92.0
MS.gene82596.t1 AT4G34880 23.958 480 269 15 43 508 45 442 1.19e-17 86.3
MS.gene82596.t1 AT3G17970 41.905 105 61 0 149 253 102 206 8.99e-16 80.5
MS.gene82596.t1 AT3G17970 42.308 104 60 0 149 252 102 205 1.03e-15 80.5

Find 188 sgRNAs with CRISPR-Local

Find 404 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTGAAGCTTCTGCATTTC+AGG 0.094048 3.1:-36022975 MS.gene82596:intron
CCAACCCGTGGGATGTTAAT+AGG 0.184295 3.1:-36021286 MS.gene82596:CDS
CCTTCAGCTGCTTATAAAAT+TGG 0.189323 3.1:-36019549 MS.gene82596:intron
GTCAAAATGAGATAGAAAAT+TGG 0.232450 3.1:+36020754 None:intergenic
CTTGATGCCATTGGCTGCTT+TGG 0.241283 3.1:-36021083 MS.gene82596:CDS
CTTGAAGCTATTCCTTATAA+TGG 0.275796 3.1:+36019614 None:intergenic
GGTTCATCTGTCGCTGATGC+TGG 0.285798 3.1:-36021062 MS.gene82596:CDS
TGTTGTTGGGAAGACGAATA+TGG 0.330954 3.1:-36023020 MS.gene82596:CDS
CCATGTGGATTTATTGAGAA+TGG 0.335224 3.1:-36018560 MS.gene82596:CDS
TGTCTCGCTATGATGGTATT+AGG 0.343270 3.1:-36020384 MS.gene82596:intron
TATGGGCGCGTCTCAAGATT+TGG 0.346456 3.1:-36021128 MS.gene82596:CDS
TGGTGTGCTTGTTGCTGTTA+AGG 0.347061 3.1:-36023155 MS.gene82596:CDS
CCCTTGAAAGGACTGAGAAT+TGG 0.350069 3.1:-36020707 MS.gene82596:CDS
CCTGTTGGCCTGCAAATGAT+TGG 0.354266 3.1:-36018524 MS.gene82596:CDS
GAGGAAATTGGTCCTCTTGC+TGG 0.355923 3.1:-36023175 MS.gene82596:CDS
GGGATTGGTCGGAAGGGAGG+TGG 0.356126 3.1:+36023242 None:intergenic
ATTCTCCTCCATGCAATTGC+TGG 0.372958 3.1:-36021038 MS.gene82596:CDS
ATTGGTCGGAAGGGAGGTGG+AGG 0.381354 3.1:+36023245 None:intergenic
GGTGGAGGAAGGAACGGAGG+TGG 0.388259 3.1:+36023260 None:intergenic
ATGCTGCACCAATCATTTGC+AGG 0.388800 3.1:+36018516 None:intergenic
AAGACGAATATGGATGAGTT+TGG 0.396095 3.1:-36023010 MS.gene82596:CDS
ATCGCTGCGGGCGAGGAAAT+TGG 0.401828 3.1:-36023187 MS.gene82596:CDS
CGGTCAGACGGAGGCGGGTG+AGG 0.402657 3.1:+36023287 None:intergenic
GGGGTGCGGTGGTAGGTTGG+GGG 0.403036 3.1:+36023383 None:intergenic
GAGTTGGGTGGGATTGTTGT+TGG 0.403136 3.1:-36023034 MS.gene82596:CDS
AACAGGTGAGAACCATTATA+AGG 0.404504 3.1:-36019626 MS.gene82596:intron
CGAGGATACTTGAGGGTTAT+CGG 0.406609 3.1:-36023093 MS.gene82596:CDS
TCAAAATGAGATAGAAAATT+GGG 0.409705 3.1:+36020755 None:intergenic
ACCAATTCTCAGTCCTTTCA+AGG 0.410994 3.1:+36020706 None:intergenic
AGAGAGTGGAACGTGGGGTT+TGG 0.412341 3.1:+36023458 None:intergenic
GAAGGAACGGAGGTGGGGTT+CGG 0.415482 3.1:+36023267 None:intergenic
CAACCCGTGGGATGTTAATA+GGG 0.416432 3.1:-36021285 MS.gene82596:CDS
GGGGTTCGGTCAGACGGAGG+CGG 0.416687 3.1:+36023281 None:intergenic
GTAGGTTTGAAGCCAACATA+TGG 0.418336 3.1:-36021146 MS.gene82596:CDS
AACTGCAGCTGCCGATCCTC+CGG 0.421581 3.1:+36021247 None:intergenic
AGTTGGGTGGGATTGTTGTT+GGG 0.424283 3.1:-36023033 MS.gene82596:CDS
CCAATCATTTGCAGGCCAAC+AGG 0.424765 3.1:+36018524 None:intergenic
GTGCCTGAGCGAGGAGGGAT+TGG 0.432715 3.1:+36023227 None:intergenic
GTGGAGGAAGGAACGGAGGT+GGG 0.435354 3.1:+36023261 None:intergenic
GAATCCCGAGCCAAAGGGTT+AGG 0.438985 3.1:-36020177 MS.gene82596:CDS
GATCCTCCGGATGATCCTCC+TGG 0.440465 3.1:+36021260 None:intergenic
TACACTAAACTTCGTGTTGA+CGG 0.440960 3.1:-36018464 MS.gene82596:CDS
ACACTAAACTTCGTGTTGAC+GGG 0.441732 3.1:-36018463 MS.gene82596:CDS
CTAGCTCATCAGCATAAACT+TGG 0.445051 3.1:+36020214 None:intergenic
GGAGGTGGAGGAAGGAACGG+AGG 0.445202 3.1:+36023257 None:intergenic
GGGGTGTGTGAGAGTAGCTT+GGG 0.445406 3.1:+36023402 None:intergenic
CGGAGAGGGTGTTGGTGCGA+AGG 0.447100 3.1:+36023332 None:intergenic
TGGTGCGAAGGGAGTGGCGA+AGG 0.453034 3.1:+36023344 None:intergenic
GTCGGTGGCGGAGAGGGTGT+TGG 0.455253 3.1:+36023324 None:intergenic
GGAGGGATTGGTCGGAAGGG+AGG 0.457372 3.1:+36023239 None:intergenic
GTTCATCTGTCGCTGATGCT+GGG 0.461237 3.1:-36021061 MS.gene82596:CDS
TCAGACGGAGGCGGGTGAGG+TGG 0.463017 3.1:+36023290 None:intergenic
GGGACATATGCCCTTTCAGC+TGG 0.466577 3.1:-36019979 MS.gene82596:CDS
TAGGTAAATGTCAACCTAGC+TGG 0.467203 3.1:-36018602 MS.gene82596:CDS
AGAACCTAACCCTTTGGCTC+GGG 0.470303 3.1:+36020173 None:intergenic
AGTAGCTTGGGTGGTGATGG+TGG 0.470306 3.1:+36023414 None:intergenic
AAGGGTGAGGATTTGAGAGG+GGG 0.471284 3.1:+36023363 None:intergenic
TACCTCAGAACCTAACCCTT+TGG 0.473794 3.1:+36020167 None:intergenic
GGGTTCGGTCAGACGGAGGC+GGG 0.475235 3.1:+36023282 None:intergenic
GTATCGTTGGGAAGTGATAC+TGG 0.476953 3.1:-36021206 MS.gene82596:CDS
GAGAGTAGCTTGGGTGGTGA+TGG 0.480412 3.1:+36023411 None:intergenic
TCCAACTTGTCTCGCTATGA+TGG 0.480589 3.1:-36020391 MS.gene82596:CDS
GTGAAGAGAGTTAAGGAGTT+GGG 0.481622 3.1:-36023049 MS.gene82596:CDS
CGGCAGCTGCAGTTTCTGCC+AGG 0.482964 3.1:-36021238 MS.gene82596:CDS
GATGAGCTAGACTCTCTCTA+TGG 0.484664 3.1:-36020201 MS.gene82596:CDS
TGGGTGGTGATGGTGGATGA+TGG 0.484855 3.1:+36023421 None:intergenic
GGAACGTGGGGTTTGGAGTG+TGG 0.485069 3.1:+36023465 None:intergenic
CGACCAATCCCTCCTCGCTC+AGG 0.485149 3.1:-36023230 MS.gene82596:CDS
TTCACCGCCGTCGCATCAAA+CGG 0.485217 3.1:+36023067 None:intergenic
TGGTGATGGTGGATGATGGA+AGG 0.487720 3.1:+36023425 None:intergenic
TGCTGGCAACCCAAGTGAAA+AGG 0.489336 3.1:+36020444 None:intergenic
GAATATGGATGAGTTTGGTA+TGG 0.494732 3.1:-36023005 MS.gene82596:CDS
ATTGAAGATGGTGTTGATGC+TGG 0.494844 3.1:-36020668 MS.gene82596:CDS
CAGACGGAGGCGGGTGAGGT+GGG 0.495572 3.1:+36023291 None:intergenic
CAACGATACAACACATTGCC+TGG 0.499311 3.1:+36021220 None:intergenic
GGAGAGGGTGTTGGTGCGAA+GGG 0.500125 3.1:+36023333 None:intergenic
TGGGATGTTAATAGGGTGCC+AGG 0.501326 3.1:-36021278 MS.gene82596:CDS
TAAGCAGCTGAAGGAGCTGC+AGG 0.503173 3.1:+36019558 None:intergenic
GGAGGTGGGGTTCGGTCAGA+CGG 0.506358 3.1:+36023275 None:intergenic
TCGGCCTCCGTTTGATGCGA+CGG 0.507198 3.1:-36023074 MS.gene82596:CDS
AGGGTGCCAGGAGGATCATC+CGG 0.508700 3.1:-36021266 MS.gene82596:CDS
CATTATAAGGAATAGCTTCA+AGG 0.510073 3.1:-36019613 MS.gene82596:CDS
CCTAGCTGGACTACCTGCCT+TGG 0.511239 3.1:-36018588 MS.gene82596:CDS
GGGTGTTGGTGCGAAGGGAG+TGG 0.514103 3.1:+36023338 None:intergenic
GGTGGGGTTCGGTCAGACGG+AGG 0.514187 3.1:+36023278 None:intergenic
GAAGGGTGAGGATTTGAGAG+GGG 0.518189 3.1:+36023362 None:intergenic
ATCATAGTAACCAGCTGAAA+GGG 0.518202 3.1:+36019969 None:intergenic
GCGAGGAGGGATTGGTCGGA+AGG 0.518314 3.1:+36023235 None:intergenic
CCTCGCCCGCAGCGATTCTA+CGG 0.518433 3.1:+36023194 None:intergenic
ATTCGTGAAACTATTGAAGA+TGG 0.519456 3.1:-36020680 MS.gene82596:CDS
GAATAGCTTCAAGGAAGCGC+TGG 0.521105 3.1:-36019604 MS.gene82596:CDS
TTGGAAAGTAAGCCCTTGAA+AGG 0.521290 3.1:-36020719 MS.gene82596:CDS
GTGTGTGAGAGTAGCTTGGG+TGG 0.521382 3.1:+36023405 None:intergenic
AATGAGGTCGGTGGCGGAGA+GGG 0.521708 3.1:+36023318 None:intergenic
TGTTAAGGATAATATTTGTA+CGG 0.523699 3.1:-36023140 MS.gene82596:CDS
TGGAGGAAGGAACGGAGGTG+GGG 0.527467 3.1:+36023262 None:intergenic
CCAATTCTCAGTCCTTTCAA+GGG 0.528903 3.1:+36020707 None:intergenic
AGGAGGATCATCCGGAGGAT+CGG 0.529125 3.1:-36021258 MS.gene82596:CDS
CCGTAGAATCGCTGCGGGCG+AGG 0.530764 3.1:-36023194 MS.gene82596:CDS
ATATTACAAACGAGCGCAGC+AGG 0.530821 3.1:-36019944 MS.gene82596:intron
GCTGACATGCCGTCGACTGG+TGG 0.531775 3.1:-36023118 MS.gene82596:CDS
CTTGAGACGCGCCCATATGT+TGG 0.532165 3.1:+36021134 None:intergenic
CGTCTCAAGATTTGGACTCA+TGG 0.533310 3.1:-36021120 MS.gene82596:CDS
GGGAAATCAAGATATCATAT+TGG 0.533729 3.1:+36019580 None:intergenic
ACGGCTGACATGCCGTCGAC+TGG 0.535541 3.1:-36023121 MS.gene82596:CDS
GTCATGTGCCTGAGCGAGGA+GGG 0.535764 3.1:+36023222 None:intergenic
CACTAAACTTCGTGTTGACG+GGG 0.536615 3.1:-36018462 MS.gene82596:CDS
GGATCGACTGGCCTTCCTGT+TGG 0.537162 3.1:-36018539 MS.gene82596:CDS
AAGGGAGAAGCGTGAGAGAG+TGG 0.537183 3.1:+36023444 None:intergenic
ACCATCATAGCGAGACAAGT+TGG 0.538119 3.1:+36020390 None:intergenic
TGCCGTCGACTGGTGGGTCG+AGG 0.539238 3.1:-36023111 MS.gene82596:CDS
CATCATAGTAACCAGCTGAA+AGG 0.540452 3.1:+36019968 None:intergenic
GGATTGAATGAGGTCGGTGG+CGG 0.541744 3.1:+36023312 None:intergenic
TATCATGACCAGCAATTGCA+TGG 0.543365 3.1:+36021030 None:intergenic
AAGAGAGTTAAGGAGTTGGG+TGG 0.544145 3.1:-36023046 MS.gene82596:CDS
GCAACAAGCACACCAGCAAG+AGG 0.545235 3.1:+36023163 None:intergenic
TAGGTTTGAAGCCAACATAT+GGG 0.545372 3.1:-36021145 MS.gene82596:CDS
CAGAACCTAACCCTTTGGCT+CGG 0.546221 3.1:+36020172 None:intergenic
TGGTGGAAGTGTGAGGCAGC+CGG 0.546383 3.1:-36021186 MS.gene82596:CDS
CGAGGAGGGATTGGTCGGAA+GGG 0.546960 3.1:+36023236 None:intergenic
GATCCTTTGGCTATGTATGC+TGG 0.549623 3.1:-36019429 MS.gene82596:CDS
AATATGGATGAGTTTGGTAT+GGG 0.549939 3.1:-36023004 MS.gene82596:CDS
GGCACCCTATTAACATCCCA+CGG 0.550526 3.1:+36021281 None:intergenic
AAGGGAGGTGGAGGAAGGAA+CGG 0.550801 3.1:+36023254 None:intergenic
AGAGAGTTAAGGAGTTGGGT+GGG 0.551590 3.1:-36023045 MS.gene82596:CDS
TGATGCCACATCAAGTAAGC+AGG 0.552918 3.1:-36021003 MS.gene82596:intron
CAGGCAATGTGTTGTATCGT+TGG 0.553276 3.1:-36021219 MS.gene82596:CDS
GAAGGGAGTGGCGAAGGGTG+AGG 0.555290 3.1:+36023350 None:intergenic
CCACATGGTAAAACCAAGGC+AGG 0.555507 3.1:+36018575 None:intergenic
GTCGGAAGGGAGGTGGAGGA+AGG 0.557260 3.1:+36023249 None:intergenic
TATGGTGAATCCCGAGCCAA+AGG 0.561140 3.1:-36020183 MS.gene82596:CDS
GCGAAGGGTGAGGATTTGAG+AGG 0.562088 3.1:+36023360 None:intergenic
GATTGGTGCAGCATTTAATG+AGG 0.564316 3.1:-36018507 MS.gene82596:CDS
TTTATTGAGAATGGATCGAC+TGG 0.565848 3.1:-36018551 MS.gene82596:CDS
CCAAGGCAGGTAGTCCAGCT+AGG 0.568026 3.1:+36018588 None:intergenic
GAGGTGGGATTGAATGAGGT+CGG 0.569920 3.1:+36023306 None:intergenic
AGCCAAAGGGTTAGGTTCTG+AGG 0.574572 3.1:-36020169 MS.gene82596:intron
CAAGGTCATGTGCCTGAGCG+AGG 0.574595 3.1:+36023218 None:intergenic
TGGTGGGTCGAGGATACTTG+AGG 0.574780 3.1:-36023101 MS.gene82596:CDS
GGTGATGGTGGATGATGGAA+GGG 0.575534 3.1:+36023426 None:intergenic
TCATACCTGCTTACTTGATG+TGG 0.577058 3.1:+36020998 None:intergenic
CCGCAGCGATTCTACGGTCA+AGG 0.578115 3.1:+36023200 None:intergenic
GACGGCGGTGAAGAGAGTTA+AGG 0.579689 3.1:-36023056 MS.gene82596:CDS
AGGCAATGTGTTGTATCGTT+GGG 0.585368 3.1:-36021218 MS.gene82596:CDS
AGCAGCTGAAGGAGCTGCAG+GGG 0.585773 3.1:+36019560 None:intergenic
CTGAAATGCAGAAGCTTCAG+TGG 0.585857 3.1:+36022976 None:intergenic
GGTGCGAAGGGAGTGGCGAA+GGG 0.585986 3.1:+36023345 None:intergenic
ACAACACCGCAAAATGATGC+CGG 0.586556 3.1:+36021167 None:intergenic
CGAAGGGTGAGGATTTGAGA+GGG 0.587213 3.1:+36023361 None:intergenic
AGCGTGAGAGAGTGGAACGT+GGG 0.590701 3.1:+36023452 None:intergenic
GGTGAAGAGAGTTAAGGAGT+TGG 0.591063 3.1:-36023050 MS.gene82596:CDS
GGGTGAGGTGGGATTGAATG+AGG 0.593659 3.1:+36023302 None:intergenic
CTTGACCGTAGAATCGCTGC+GGG 0.595517 3.1:-36023199 MS.gene82596:CDS
GCGTCATCACTTGATGCCAT+TGG 0.595721 3.1:-36021092 MS.gene82596:CDS
GGTGGGTCGAGGATACTTGA+GGG 0.597676 3.1:-36023100 MS.gene82596:CDS
AATAGGTGACTGCCAACCCG+TGG 0.597933 3.1:-36021298 MS.gene82596:intron
CCTATTAACATCCCACGGGT+TGG 0.601481 3.1:+36021286 None:intergenic
ATCCTCGACCCACCAGTCGA+CGG 0.609093 3.1:+36023109 None:intergenic
TCATTTGCAGGCCAACAGGA+AGG 0.610270 3.1:+36018528 None:intergenic
AAAGCGAGGACATAGTATGC+TGG 0.610724 3.1:+36020427 None:intergenic
CTGAGCGAGGAGGGATTGGT+CGG 0.613946 3.1:+36023231 None:intergenic
AGATGAACCAAAGCAGCCAA+TGG 0.614909 3.1:+36021076 None:intergenic
AAGCAGCTGAAGGAGCTGCA+GGG 0.619430 3.1:+36019559 None:intergenic
GCACCCTATTAACATCCCAC+GGG 0.621175 3.1:+36021282 None:intergenic
ATGGTGAATCCCGAGCCAAA+GGG 0.624972 3.1:-36020182 MS.gene82596:CDS
AAGCGTGAGAGAGTGGAACG+TGG 0.633684 3.1:+36023451 None:intergenic
CTGACATGCCGTCGACTGGT+GGG 0.633780 3.1:-36023117 MS.gene82596:CDS
GTGGGATTGAATGAGGTCGG+TGG 0.637339 3.1:+36023309 None:intergenic
ATATGGATGAGTTTGGTATG+GGG 0.639425 3.1:-36023003 MS.gene82596:CDS
GGCAACCCAAGTGAAAAGGA+TGG 0.642277 3.1:+36020448 None:intergenic
GCCTCCGTTTGATGCGACGG+CGG 0.643211 3.1:-36023071 MS.gene82596:CDS
ATTAGGATGCTCTGTGAACG+AGG 0.648039 3.1:-36020603 MS.gene82596:intron
CCATTCTCAATAAATCCACA+TGG 0.649598 3.1:+36018560 None:intergenic
TCACCAGCATACATAGCCAA+AGG 0.651194 3.1:+36019426 None:intergenic
GAATGAGGTCGGTGGCGGAG+AGG 0.652364 3.1:+36023317 None:intergenic
GGTCATGTGCCTGAGCGAGG+AGG 0.655477 3.1:+36023221 None:intergenic
ATAGGTGACTGCCAACCCGT+GGG 0.663939 3.1:-36021297 MS.gene82596:intron
AAGATGATTCAGACAAAGCG+AGG 0.664996 3.1:+36020413 None:intergenic
AAATCCACATGGTAAAACCA+AGG 0.672604 3.1:+36018571 None:intergenic
ACCGCCGTCGCATCAAACGG+AGG 0.674606 3.1:+36023070 None:intergenic
GCGTGAGAGAGTGGAACGTG+GGG 0.681489 3.1:+36023453 None:intergenic
GTGATACTGGTGGAAGTGTG+AGG 0.689164 3.1:-36021193 MS.gene82596:CDS
CCTTGACCGTAGAATCGCTG+CGG 0.690581 3.1:-36023200 MS.gene82596:CDS
AGGGTGAGGATTTGAGAGGG+GGG 0.698726 3.1:+36023364 None:intergenic
GTGCCAGGAGGATCATCCGG+AGG 0.699333 3.1:-36021263 MS.gene82596:CDS
CATGACCAGCAATTGCATGG+AGG 0.725633 3.1:+36021033 None:intergenic
GATGTTAATAGGGTGCCAGG+AGG 0.756629 3.1:-36021275 MS.gene82596:CDS
TCGTTGGGAAGTGATACTGG+TGG 0.795744 3.1:-36021203 MS.gene82596:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAATACAACATAAATAT+TGG - chr3.1:36023059-36023078 MS.gene82596:CDS 10.0%
!!! TCACTTTAAAATTTAAATTA+TGG + chr3.1:36019054-36019073 None:intergenic 10.0%
!! ATTGTTAAAAGGTAATTAAT+TGG + chr3.1:36021113-36021132 None:intergenic 15.0%
!! CTTAAAATTATTGTCAAATT+AGG - chr3.1:36019306-36019325 MS.gene82596:intron 15.0%
!! GAATTGAAATAAAATTAACT+AGG + chr3.1:36019395-36019414 None:intergenic 15.0%
!! TGAAAATATATATAAAGAGA+GGG + chr3.1:36018977-36018996 None:intergenic 15.0%
!! TGATTAATTAAGATATTTCT+TGG + chr3.1:36022826-36022845 None:intergenic 15.0%
!! TTGAAAATATATATAAAGAG+AGG + chr3.1:36018978-36018997 None:intergenic 15.0%
!!! ACTTTATTTTATGTTTTTCT+TGG - chr3.1:36022007-36022026 MS.gene82596:intron 15.0%
!!! CTAATTTGACAATAATTTTA+AGG + chr3.1:36019308-36019327 None:intergenic 15.0%
!!! TTCATTTATTTTAGAAGTTT+GGG - chr3.1:36022240-36022259 MS.gene82596:intron 15.0%
!!! TTCTATTTTTAATACATTTC+AGG - chr3.1:36021898-36021917 MS.gene82596:intron 15.0%
!!! TTGGTTTTTTTTTTTTTATC+CGG - chr3.1:36019806-36019825 MS.gene82596:intron 15.0%
!!! TTTCATTTATTTTAGAAGTT+TGG - chr3.1:36022239-36022258 MS.gene82596:intron 15.0%
!! AAACATATCTCAGTTATAAA+TGG + chr3.1:36020577-36020596 None:intergenic 20.0%
!! AACATATCTCAGTTATAAAT+GGG + chr3.1:36020576-36020595 None:intergenic 20.0%
!! AAGTATTTCATTCTTCTTAT+TGG - chr3.1:36022529-36022548 MS.gene82596:intron 20.0%
!! AATACCAATGCATATAAAAT+TGG + chr3.1:36021867-36021886 None:intergenic 20.0%
!! ACAAAATAAAACATTGTGTT+CGG + chr3.1:36021617-36021636 None:intergenic 20.0%
!! AGCAAAAAAAGAATATGAAA+TGG + chr3.1:36019765-36019784 None:intergenic 20.0%
!! ATCCTTCTTAATTTCAAATT+TGG - chr3.1:36021787-36021806 MS.gene82596:intron 20.0%
!! ATCTAAAAGTTCAAAAAACA+AGG + chr3.1:36019940-36019959 None:intergenic 20.0%
!! ATGGTAAGTTGTTAAAATAT+AGG - chr3.1:36019595-36019614 MS.gene82596:CDS 20.0%
!! ATTACAAAACATACAAAAAG+TGG - chr3.1:36020468-36020487 MS.gene82596:intron 20.0%
!! ATTGTATAGGATTATTGTTT+AGG + chr3.1:36023127-36023146 None:intergenic 20.0%
!! ATTTGAAAGTTTAATAGAGT+CGG - chr3.1:36019655-36019674 MS.gene82596:intron 20.0%
!! TCAAAATGAGATAGAAAATT+GGG + chr3.1:36021168-36021187 None:intergenic 20.0%
!! TCTAAAAGTTCAAAAAACAA+GGG + chr3.1:36019939-36019958 None:intergenic 20.0%
!! TGGTAAGTTGTTAAAATATA+GGG - chr3.1:36019596-36019615 MS.gene82596:CDS 20.0%
!! TGTTAAGGATAATATTTGTA+CGG - chr3.1:36018780-36018799 MS.gene82596:intron 20.0%
!! TTAAAGTGAATATTAATCTC+AGG - chr3.1:36019065-36019084 MS.gene82596:intron 20.0%
!! TTAACAACATATAATGAGAT+CGG + chr3.1:36022583-36022602 None:intergenic 20.0%
!! TTACAAAACATACAAAAAGT+GGG - chr3.1:36020469-36020488 MS.gene82596:intron 20.0%
!! TTCCAATATTTATAATGTCA+GGG - chr3.1:36019685-36019704 MS.gene82596:intron 20.0%
!! TTGCAATTTCAATAACTTTA+GGG - chr3.1:36019343-36019362 MS.gene82596:intron 20.0%
!! TTTCCAATATTTATAATGTC+AGG - chr3.1:36019684-36019703 MS.gene82596:intron 20.0%
!! TTTGCAATTTCAATAACTTT+AGG - chr3.1:36019342-36019361 MS.gene82596:intron 20.0%
!!! AATTAATTGGCTTAATAACA+AGG + chr3.1:36021100-36021119 None:intergenic 20.0%
!!! AGTTAGTTTTTTTGTTTGTT+TGG - chr3.1:36019116-36019135 MS.gene82596:intron 20.0%
!!! CTTTTTTTCATTATTAGCAA+TGG - chr3.1:36020982-36021001 MS.gene82596:intron 20.0%
!!! TAATGTTTGCTTTTCTTTAT+TGG - chr3.1:36023280-36023299 MS.gene82596:CDS 20.0%
!!! TATTTTATGTTTTTCTTGGT+GGG - chr3.1:36022011-36022030 MS.gene82596:intron 20.0%
!!! TCATTGATAATCATTTTGTT+TGG - chr3.1:36021648-36021667 MS.gene82596:intron 20.0%
!!! TGAATCAAGTTTAATTTCAA+TGG + chr3.1:36022700-36022719 None:intergenic 20.0%
!!! TTATTTTATGTTTTTCTTGG+TGG - chr3.1:36022010-36022029 MS.gene82596:intron 20.0%
! AAATGTAGGGAATAAATTGA+TGG - chr3.1:36019576-36019595 MS.gene82596:CDS 25.0%
! ACTAATAAAAAATGCACTTG+TGG + chr3.1:36019212-36019231 None:intergenic 25.0%
! AGCTAACAATGTAATTTATC+AGG - chr3.1:36021137-36021156 MS.gene82596:CDS 25.0%
! AGTTATAGAGAAAAATGAAG+TGG + chr3.1:36021347-36021366 None:intergenic 25.0%
! ATAGCAAGTGGTTAAATAAA+GGG - chr3.1:36019628-36019647 MS.gene82596:intron 25.0%
! ATGGTTCAAAGTTTCAAATA+AGG + chr3.1:36019035-36019054 None:intergenic 25.0%
! ATTCTTAGATACATTAGTGT+GGG - chr3.1:36019997-36020016 MS.gene82596:CDS 25.0%
! CGTCTCTATATTTATTGTAT+AGG + chr3.1:36023140-36023159 None:intergenic 25.0%
! CTTAATTAATCAATAACTGC+CGG - chr3.1:36022834-36022853 MS.gene82596:intron 25.0%
! GAAGAATGAAAATTGCAAAT+CGG - chr3.1:36020291-36020310 MS.gene82596:intron 25.0%
! GATGCATATGTTAATTCAAT+AGG - chr3.1:36020605-36020624 MS.gene82596:CDS 25.0%
! GATTATGAGTGTTTGAAAAA+AGG - chr3.1:36019477-36019496 MS.gene82596:intron 25.0%
! GATTGAATATATACCATCTA+AGG + chr3.1:36022795-36022814 None:intergenic 25.0%
! GTCAAAATGAGATAGAAAAT+TGG + chr3.1:36021169-36021188 None:intergenic 25.0%
! GTTAGCTATTCATTGTTAAA+AGG + chr3.1:36021124-36021143 None:intergenic 25.0%
! TAACAATGTAATTTATCAGG+AGG - chr3.1:36021140-36021159 MS.gene82596:CDS 25.0%
! TACAAAACATACAAAAAGTG+GGG - chr3.1:36020470-36020489 MS.gene82596:intron 25.0%
! TATATACTTGACACATGTTA+AGG + chr3.1:36022879-36022898 None:intergenic 25.0%
! TATATCTTCTGAGTATGTTA+GGG - chr3.1:36019531-36019550 MS.gene82596:intron 25.0%
! TCTCTACGTCTTAAATATAA+TGG + chr3.1:36020356-36020375 None:intergenic 25.0%
! TGAAAAGAAAAATGATCCTT+TGG - chr3.1:36022478-36022497 MS.gene82596:intron 25.0%
! TGAAATTAAGAAGGATTGAA+AGG + chr3.1:36021783-36021802 None:intergenic 25.0%
! TGAATTAAATTTGTGAGCAT+GGG - chr3.1:36020240-36020259 MS.gene82596:intron 25.0%
! TGACTGAATTCATTATCATT+GGG + chr3.1:36022064-36022083 None:intergenic 25.0%
! TGTTGAATTAGAGAAAATAG+AGG - chr3.1:36022976-36022995 MS.gene82596:CDS 25.0%
! TTAATTAATCAATAACTGCC+GGG - chr3.1:36022835-36022854 MS.gene82596:intron 25.0%
! TTACTACTAACATTACAAAC+TGG + chr3.1:36020155-36020174 None:intergenic 25.0%
! TTATATCTTCTGAGTATGTT+AGG - chr3.1:36019530-36019549 MS.gene82596:intron 25.0%
! TTGAATTAAATTTGTGAGCA+TGG - chr3.1:36020239-36020258 MS.gene82596:intron 25.0%
! TTTAAGGACTAAATTAACCA+AGG + chr3.1:36019292-36019311 None:intergenic 25.0%
!! AACAACATTTTTACCAAACA+TGG + chr3.1:36020956-36020975 None:intergenic 25.0%
!! AGCCAAATTTGAAATTAAGA+AGG + chr3.1:36021792-36021811 None:intergenic 25.0%
!! TGATCCAATTTTATATGCAT+TGG - chr3.1:36021860-36021879 MS.gene82596:intron 25.0%
!! TTGGATCAATTCTTTTATAC+AGG + chr3.1:36021848-36021867 None:intergenic 25.0%
!!! ATAATCATTTTGTTTGGCTT+GGG - chr3.1:36021654-36021673 MS.gene82596:intron 25.0%
!!! GTGAAAATGAGAATTTTGAT+GGG - chr3.1:36021920-36021939 MS.gene82596:intron 25.0%
!!! TGAAAATGAGAATTTTGATG+GGG - chr3.1:36021921-36021940 MS.gene82596:intron 25.0%
!!! TTGGTGGTTTTTCTTTTTAT+AGG - chr3.1:36023299-36023318 MS.gene82596:CDS 25.0%
AATATGGATGAGTTTGGTAT+GGG - chr3.1:36018916-36018935 MS.gene82596:intron 30.0%
ACAAACAAACAAACAACTAC+CGG + chr3.1:36019828-36019847 None:intergenic 30.0%
ACAACCTAAAAACAGATTTG+AGG + chr3.1:36019244-36019263 None:intergenic 30.0%
ACCTTCTCTATATCTAGATA+TGG - chr3.1:36021680-36021699 MS.gene82596:intron 30.0%
AGAAAAGCAAACATTATGCT+CGG + chr3.1:36023276-36023295 None:intergenic 30.0%
ATAGTAAGCGGTTAAATGTA+GGG - chr3.1:36019563-36019582 MS.gene82596:CDS 30.0%
ATATCTAGATATAGAGAAGG+TGG + chr3.1:36021681-36021700 None:intergenic 30.0%
ATTCGTGAAACTATTGAAGA+TGG - chr3.1:36021240-36021259 MS.gene82596:CDS 30.0%
CATTATAAGGAATAGCTTCA+AGG - chr3.1:36022307-36022326 MS.gene82596:intron 30.0%
CTAACATGCAATAATGCAAA+AGG + chr3.1:36022416-36022435 None:intergenic 30.0%
CTTGAAGCTATTCCTTATAA+TGG + chr3.1:36022309-36022328 None:intergenic 30.0%
GATAGCAAGTGGTTAAATAA+AGG - chr3.1:36019627-36019646 MS.gene82596:intron 30.0%
GATTCTTAGATACATTAGTG+TGG - chr3.1:36019996-36020015 MS.gene82596:CDS 30.0%
GGCTCTTTGTTAAATATGAA+GGG - chr3.1:36021035-36021054 MS.gene82596:CDS 30.0%
GGGAAATCAAGATATCATAT+TGG + chr3.1:36022343-36022362 None:intergenic 30.0%
GTCCCTGACATTATAAATAT+TGG + chr3.1:36019690-36019709 None:intergenic 30.0%
GTGACTGAATTCATTATCAT+TGG + chr3.1:36022065-36022084 None:intergenic 30.0%
TAACTGAGATATGTTTACTC+AGG - chr3.1:36020581-36020600 MS.gene82596:intron 30.0%
TATAGAGAAAAATGAAGTGG+AGG + chr3.1:36021344-36021363 None:intergenic 30.0%
TCCATATCTAGATATAGAGA+AGG + chr3.1:36021684-36021703 None:intergenic 30.0%
TGTTAGTAGTAAATGTGAGA+AGG - chr3.1:36020163-36020182 MS.gene82596:intron 30.0%
TTACATAGAACACGCATAAA+AGG + chr3.1:36022276-36022295 None:intergenic 30.0%
TTCTTAGATACATTAGTGTG+GGG - chr3.1:36019998-36020017 MS.gene82596:CDS 30.0%
! AAGTTAATGGACAGATGAAA+AGG + chr3.1:36021439-36021458 None:intergenic 30.0%
! AATAGTGTTAGTTTGAGGTT+TGG - chr3.1:36022651-36022670 MS.gene82596:intron 30.0%
! AGACAAATAGTGTTAGTTTG+AGG - chr3.1:36022646-36022665 MS.gene82596:intron 30.0%
! AGTTAATGGACAGATGAAAA+GGG + chr3.1:36021438-36021457 None:intergenic 30.0%
! ATATCCTACAGTTGCTTTAT+GGG - chr3.1:36020314-36020333 MS.gene82596:intron 30.0%
! ATGATAATGAATTCAGTCAC+AGG - chr3.1:36022065-36022084 MS.gene82596:intron 30.0%
! ATGATGTTTGATGATCCATT+TGG - chr3.1:36020040-36020059 MS.gene82596:intron 30.0%
! CAGCAGAGTCAATTTTATAT+AGG - chr3.1:36023028-36023047 MS.gene82596:CDS 30.0%
! GGTGAAAATGAGAATTTTGA+TGG - chr3.1:36021919-36021938 MS.gene82596:intron 30.0%
! TATGAGTTTTTCACCATGTT+TGG - chr3.1:36020940-36020959 MS.gene82596:intron 30.0%
! TCTTTGAATGTGTTTTTCCT+TGG - chr3.1:36019272-36019291 MS.gene82596:intron 30.0%
! TTTTCTCTCCAAATAAATGC+TGG + chr3.1:36020268-36020287 None:intergenic 30.0%
!! GATAATCATTTTGTTTGGCT+TGG - chr3.1:36021653-36021672 MS.gene82596:intron 30.0%
!! TAGTCCTCAAATCTGTTTTT+AGG - chr3.1:36019237-36019256 MS.gene82596:intron 30.0%
!! TGTTTGCTTTTCTTTATTGG+TGG - chr3.1:36023283-36023302 MS.gene82596:CDS 30.0%
!! TTAACCACTTGCTATCAATT+AGG + chr3.1:36019623-36019642 None:intergenic 30.0%
!! TTTTGACTATGCAAGTTCTT+TGG - chr3.1:36021182-36021201 MS.gene82596:CDS 30.0%
!!! GTGTTTTTGTTTTCCAGTTT+GGG - chr3.1:36019874-36019893 MS.gene82596:intron 30.0%
!!! TGTGTTTTTGTTTTCCAGTT+TGG - chr3.1:36019873-36019892 MS.gene82596:intron 30.0%
AAACTCTTGCTTCATTTCCT+AGG - chr3.1:36022195-36022214 MS.gene82596:intron 35.0%
AAAGAATAGTGTCGTATGCT+AGG - chr3.1:36020093-36020112 MS.gene82596:intron 35.0%
AAATCCACATGGTAAAACCA+AGG + chr3.1:36023352-36023371 None:intergenic 35.0%
AACAGGTGAGAACCATTATA+AGG - chr3.1:36022294-36022313 MS.gene82596:intron 35.0%
AAGACGAATATGGATGAGTT+TGG - chr3.1:36018910-36018929 MS.gene82596:intron 35.0%
AAGTTCAAGGACCTAAATTG+TGG + chr3.1:36019146-36019165 None:intergenic 35.0%
ACAATGTTTGGTATAGTCTC+GGG - chr3.1:36021014-36021033 MS.gene82596:CDS 35.0%
ATATGGATGAGTTTGGTATG+GGG - chr3.1:36018917-36018936 MS.gene82596:intron 35.0%
ATCAAACTCTCTAAACCACT+GGG + chr3.1:36023201-36023220 None:intergenic 35.0%
ATCATAGTAACCAGCTGAAA+GGG + chr3.1:36021954-36021973 None:intergenic 35.0%
CCATGTGGATTTATTGAGAA+TGG - chr3.1:36023360-36023379 MS.gene82596:CDS 35.0%
CCATTCTCAATAAATCCACA+TGG + chr3.1:36023363-36023382 None:intergenic 35.0%
CCTTCAGCTGCTTATAAAAT+TGG - chr3.1:36022371-36022390 MS.gene82596:intron 35.0%
CTAAAAGACACGTAAAGAAC+AGG + chr3.1:36022166-36022185 None:intergenic 35.0%
GAATATGGATGAGTTTGGTA+TGG - chr3.1:36018915-36018934 MS.gene82596:intron 35.0%
GACAATGTTTGGTATAGTCT+CGG - chr3.1:36021013-36021032 MS.gene82596:CDS 35.0%
GATAGTAAGCGGTTAAATGT+AGG - chr3.1:36019562-36019581 MS.gene82596:CDS 35.0%
GGGCTCTTTGTTAAATATGA+AGG - chr3.1:36021034-36021053 MS.gene82596:CDS 35.0%
TAAATGTGAGAAGGTTTGAG+TGG - chr3.1:36020172-36020191 MS.gene82596:CDS 35.0%
TACACTAAACTTCGTGTTGA+CGG - chr3.1:36023456-36023475 MS.gene82596:CDS 35.0%
TATTGTCAAATTAGGTGCCA+GGG - chr3.1:36019314-36019333 MS.gene82596:intron 35.0%
TCATCTGTCCATTAACTTAC+AGG - chr3.1:36021441-36021460 MS.gene82596:intron 35.0%
TCTCTTTCTTTGACATTTGC+AGG - chr3.1:36022455-36022474 MS.gene82596:intron 35.0%
TTATGCGTGTTCTATGTAAC+AGG - chr3.1:36022277-36022296 MS.gene82596:intron 35.0%
TTATTGTCAAATTAGGTGCC+AGG - chr3.1:36019313-36019332 MS.gene82596:intron 35.0%
TTTATTGAGAATGGATCGAC+TGG - chr3.1:36023369-36023388 MS.gene82596:CDS 35.0%
! CCAATTTTATAAGCAGCTGA+AGG + chr3.1:36022374-36022393 None:intergenic 35.0%
! CTGGACATTTGAAATTTGAG+AGG + chr3.1:36020136-36020155 None:intergenic 35.0%
! GACTTCTAGTTACTCCATAA+AGG - chr3.1:36022914-36022933 MS.gene82596:intron 35.0%
! GATATCCTACAGTTGCTTTA+TGG - chr3.1:36020313-36020332 MS.gene82596:intron 35.0%
! GGGACTAAATTGATAGTAAG+CGG - chr3.1:36019551-36019570 MS.gene82596:CDS 35.0%
! GTTGTAGTGCATTTCTGTTT+TGG - chr3.1:36019787-36019806 MS.gene82596:intron 35.0%
! TAGGTTTGAAGCCAACATAT+GGG - chr3.1:36020775-36020794 MS.gene82596:intron 35.0%
! TATCCTACAGTTGCTTTATG+GGG - chr3.1:36020315-36020334 MS.gene82596:intron 35.0%
! TTAGAAGTTTGGGATCTACA+AGG - chr3.1:36022250-36022269 MS.gene82596:intron 35.0%
!! TATGCATTGGTATTTTGAGC+TGG - chr3.1:36021873-36021892 MS.gene82596:intron 35.0%
!!! TTTTTGTTTTCCAGTTTGGG+TGG - chr3.1:36019877-36019896 MS.gene82596:intron 35.0%
AAACCAGTCTCTGACTTTGT+AGG - chr3.1:36019432-36019451 MS.gene82596:CDS 40.0%
AACCAGTCTCTGACTTTGTA+GGG - chr3.1:36019433-36019452 MS.gene82596:CDS 40.0%
AACTGATGACTTCATTCGCT+GGG + chr3.1:36022945-36022964 None:intergenic 40.0%
AAGATGATTCAGACAAAGCG+AGG + chr3.1:36021510-36021529 None:intergenic 40.0%
ACCAATTCTCAGTCCTTTCA+AGG + chr3.1:36021217-36021236 None:intergenic 40.0%
AGGCAATGTGTTGTATCGTT+GGG - chr3.1:36020702-36020721 MS.gene82596:CDS 40.0%
ATAACTAGTTATGCACCCAG+TGG - chr3.1:36023183-36023202 MS.gene82596:CDS 40.0%
ATGCAAAAGGAAAGCTACAC+AGG + chr3.1:36022403-36022422 None:intergenic 40.0%
ATTGTTGACGAATGACCTGA+TGG - chr3.1:36020406-36020425 MS.gene82596:CDS 40.0%
CAGTGACACCTGTAAGTTAA+TGG + chr3.1:36021452-36021471 None:intergenic 40.0%
CATCACATTATGCATCCATC+AGG + chr3.1:36020424-36020443 None:intergenic 40.0%
CATCATAGTAACCAGCTGAA+AGG + chr3.1:36021955-36021974 None:intergenic 40.0%
CATGGGTTCCAGCATTTATT+TGG - chr3.1:36020257-36020276 MS.gene82596:intron 40.0%
CCAATATGACAGCAAGTTCA+AGG + chr3.1:36019159-36019178 None:intergenic 40.0%
CCAATTCTCAGTCCTTTCAA+GGG + chr3.1:36021216-36021235 None:intergenic 40.0%
CTAGCTCATCAGCATAAACT+TGG + chr3.1:36021709-36021728 None:intergenic 40.0%
CTATGATGGTATTAGGTCAG+TGG - chr3.1:36021543-36021562 MS.gene82596:intron 40.0%
GATCAAACTCTCTAAACCAC+TGG + chr3.1:36023202-36023221 None:intergenic 40.0%
GATTGGTGCAGCATTTAATG+AGG - chr3.1:36023413-36023432 MS.gene82596:CDS 40.0%
GTGAAGAGAGTTAAGGAGTT+GGG - chr3.1:36018871-36018890 MS.gene82596:intron 40.0%
GTTTGAGTGGTGACATTATG+TGG - chr3.1:36020185-36020204 MS.gene82596:CDS 40.0%
TAACTGATGACTTCATTCGC+TGG + chr3.1:36022946-36022965 None:intergenic 40.0%
TACTACAATATGCAACGACC+CGG + chr3.1:36022856-36022875 None:intergenic 40.0%
TAGGTAAATGTCAACCTAGC+TGG - chr3.1:36023318-36023337 MS.gene82596:CDS 40.0%
TATCATGACCAGCAATTGCA+TGG + chr3.1:36020893-36020912 None:intergenic 40.0%
TCATACCTGCTTACTTGATG+TGG + chr3.1:36020925-36020944 None:intergenic 40.0%
TGAAATTGCAAACACATCCC+TGG + chr3.1:36019334-36019353 None:intergenic 40.0%
TGGTCATTGACGACAATGTT+TGG - chr3.1:36021002-36021021 MS.gene82596:intron 40.0%
TGTCTCGCTATGATGGTATT+AGG - chr3.1:36021536-36021555 MS.gene82596:intron 40.0%
TGTGTTCGGTTGTGTGTATT+TGG + chr3.1:36021603-36021622 None:intergenic 40.0%
TGTTGTTGGGAAGACGAATA+TGG - chr3.1:36018900-36018919 MS.gene82596:intron 40.0%
TGTTTGGCACACCACAATTT+AGG - chr3.1:36019132-36019151 MS.gene82596:intron 40.0%
TTGGAAAGTAAGCCCTTGAA+AGG - chr3.1:36021201-36021220 MS.gene82596:CDS 40.0%
! ACACTAAACTTCGTGTTGAC+GGG - chr3.1:36023457-36023476 MS.gene82596:CDS 40.0%
! GTAGGTTTGAAGCCAACATA+TGG - chr3.1:36020774-36020793 MS.gene82596:intron 40.0%
! TACAAAGTCAGAGACTGGTT+TGG + chr3.1:36019433-36019452 None:intergenic 40.0%
!! ATTGAAGATGGTGTTGATGC+TGG - chr3.1:36021252-36021271 MS.gene82596:CDS 40.0%
!! CCTTGAACTTGCTGTCATAT+TGG - chr3.1:36019156-36019175 MS.gene82596:intron 40.0%
!! TGATGCTGCTTCACATTTTG+AGG - chr3.1:36021293-36021312 MS.gene82596:CDS 40.0%
!!! GCTTCACATTTTGAGGCATT+AGG - chr3.1:36021300-36021319 MS.gene82596:intron 40.0%
AAAGCGAGGACATAGTATGC+TGG + chr3.1:36021496-36021515 None:intergenic 45.0%
AACTAGTCCCAGACTTCGTA+TGG + chr3.1:36019726-36019745 None:intergenic 45.0%
AAGAGAGTTAAGGAGTTGGG+TGG - chr3.1:36018874-36018893 MS.gene82596:intron 45.0%
ACAACACCGCAAAATGATGC+CGG + chr3.1:36020756-36020775 None:intergenic 45.0%
ACCATCATAGCGAGACAAGT+TGG + chr3.1:36021533-36021552 None:intergenic 45.0%
AGACACGTAAAGAACAGGAG+TGG + chr3.1:36022161-36022180 None:intergenic 45.0%
AGAGAGTTAAGGAGTTGGGT+GGG - chr3.1:36018875-36018894 MS.gene82596:intron 45.0%
AGATGAACCAAAGCAGCCAA+TGG + chr3.1:36020847-36020866 None:intergenic 45.0%
ATATTACAAACGAGCGCAGC+AGG - chr3.1:36021976-36021995 MS.gene82596:intron 45.0%
ATGCTGCACCAATCATTTGC+AGG + chr3.1:36023407-36023426 None:intergenic 45.0%
ATTAGGATGCTCTGTGAACG+AGG - chr3.1:36021317-36021336 MS.gene82596:intron 45.0%
ATTCTCCTCCATGCAATTGC+TGG - chr3.1:36020882-36020901 MS.gene82596:intron 45.0%
CAACCCGTGGGATGTTAATA+GGG - chr3.1:36020635-36020654 MS.gene82596:CDS 45.0%
CAACGATACAACACATTGCC+TGG + chr3.1:36020703-36020722 None:intergenic 45.0%
CACTGAAGCTTCTGCATTTC+AGG - chr3.1:36018945-36018964 MS.gene82596:intron 45.0%
CAGGCAATGTGTTGTATCGT+TGG - chr3.1:36020701-36020720 MS.gene82596:CDS 45.0%
CATGACTGACATCAGCCAAA+TGG + chr3.1:36020058-36020077 None:intergenic 45.0%
CCCTTGAAAGGACTGAGAAT+TGG - chr3.1:36021213-36021232 MS.gene82596:CDS 45.0%
CGAGGATACTTGAGGGTTAT+CGG - chr3.1:36018827-36018846 MS.gene82596:intron 45.0%
CGTCTCAAGATTTGGACTCA+TGG - chr3.1:36020800-36020819 MS.gene82596:intron 45.0%
CTGAAATGCAGAAGCTTCAG+TGG + chr3.1:36018947-36018966 None:intergenic 45.0%
CTGATGTCAGTCATGTTGAG+CGG - chr3.1:36020063-36020082 MS.gene82596:intron 45.0%
GAACGCTGATAAGACAACCT+AGG + chr3.1:36022215-36022234 None:intergenic 45.0%
GATCCTTTGGCTATGTATGC+TGG - chr3.1:36022491-36022510 MS.gene82596:intron 45.0%
GATGAGCTAGACTCTCTCTA+TGG - chr3.1:36021719-36021738 MS.gene82596:intron 45.0%
GCTTAAATGTCCACCCAAAC+TGG + chr3.1:36019890-36019909 None:intergenic 45.0%
GGTGAAGAGAGTTAAGGAGT+TGG - chr3.1:36018870-36018889 MS.gene82596:intron 45.0%
GTATCGTTGGGAAGTGATAC+TGG - chr3.1:36020714-36020733 MS.gene82596:CDS 45.0%
TACAAAAAGTGGGGTTGTGC+TGG - chr3.1:36020479-36020498 MS.gene82596:intron 45.0%
TACCTCAGAACCTAACCCTT+TGG + chr3.1:36021756-36021775 None:intergenic 45.0%
TCACCAGCATACATAGCCAA+AGG + chr3.1:36022497-36022516 None:intergenic 45.0%
TCCAACTTGTCTCGCTATGA+TGG - chr3.1:36021529-36021548 MS.gene82596:intron 45.0%
TCTGCTGTGTAGTTGAGACA+CGG + chr3.1:36023015-36023034 None:intergenic 45.0%
TGATGCCACATCAAGTAAGC+AGG - chr3.1:36020917-36020936 MS.gene82596:intron 45.0%
TTCGCTGGGATACTCCTTTA+TGG + chr3.1:36022931-36022950 None:intergenic 45.0%
TTCGTATGGCGCTCTCAAAT+AGG + chr3.1:36019712-36019731 None:intergenic 45.0%
TTGGGTTAAGAAGAACCGAG+AGG + chr3.1:36022046-36022065 None:intergenic 45.0%
! AGTTGGGTGGGATTGTTGTT+GGG - chr3.1:36018887-36018906 MS.gene82596:intron 45.0%
! CACTAAACTTCGTGTTGACG+GGG - chr3.1:36023458-36023477 MS.gene82596:CDS 45.0%
! CACTGCCATCCTTTTCACTT+GGG - chr3.1:36021467-36021486 MS.gene82596:intron 45.0%
! CATTAGTGTGGGGTTAGTGT+TGG - chr3.1:36020008-36020027 MS.gene82596:intron 45.0%
! GGGACCTAATTGATAGCAAG+TGG - chr3.1:36019616-36019635 MS.gene82596:CDS 45.0%
! TCACTGCCATCCTTTTCACT+TGG - chr3.1:36021466-36021485 MS.gene82596:intron 45.0%
! TGGTGTGCTTGTTGCTGTTA+AGG - chr3.1:36018765-36018784 MS.gene82596:intron 45.0%
! TTTGTAGGGCGTTCTCAGAT+AGG - chr3.1:36019447-36019466 MS.gene82596:intron 45.0%
!! AAAGTCAGAGACTGGTTTGG+TGG + chr3.1:36019430-36019449 None:intergenic 45.0%
!! CTGCTGGTTTATGCCTTAGA+TGG - chr3.1:36022779-36022798 MS.gene82596:intron 45.0%
!! TACGAAGTCTGGGACTAGTT+TGG - chr3.1:36019726-36019745 MS.gene82596:intron 45.0%
!!! GCATCATTTTGCGGTGTTGT+AGG - chr3.1:36020756-36020775 MS.gene82596:CDS 45.0%
AAGGGTGAGGATTTGAGAGG+GGG + chr3.1:36018560-36018579 None:intergenic 50.0%
AGCCAAAGGGTTAGGTTCTG+AGG - chr3.1:36021751-36021770 MS.gene82596:intron 50.0%
ATGGTGAATCCCGAGCCAAA+GGG - chr3.1:36021738-36021757 MS.gene82596:intron 50.0%
ATTTGGACGAAGAGAGCGAG+AGG + chr3.1:36021586-36021605 None:intergenic 50.0%
CAGAACCTAACCCTTTGGCT+CGG + chr3.1:36021751-36021770 None:intergenic 50.0%
CATGACCAGCAATTGCATGG+AGG + chr3.1:36020890-36020909 None:intergenic 50.0%
CCAACCCGTGGGATGTTAAT+AGG - chr3.1:36020634-36020653 MS.gene82596:CDS 50.0%
CCAATCATTTGCAGGCCAAC+AGG + chr3.1:36023399-36023418 None:intergenic 50.0%
CCACATGGTAAAACCAAGGC+AGG + chr3.1:36023348-36023367 None:intergenic 50.0%
CCTATTAACATCCCACGGGT+TGG + chr3.1:36020637-36020656 None:intergenic 50.0%
CGAAGGGTGAGGATTTGAGA+GGG + chr3.1:36018562-36018581 None:intergenic 50.0%
CTGCCCCATAAAGCAACTGT+AGG + chr3.1:36020321-36020340 None:intergenic 50.0%
GAAGGGTGAGGATTTGAGAG+GGG + chr3.1:36018561-36018580 None:intergenic 50.0%
GAGGAAATTGGTCCTCTTGC+TGG - chr3.1:36018745-36018764 MS.gene82596:intron 50.0%
GAGGTGGGATTGAATGAGGT+CGG + chr3.1:36018617-36018636 None:intergenic 50.0%
GAGTTGGGTGGGATTGTTGT+TGG - chr3.1:36018886-36018905 MS.gene82596:intron 50.0%
GCACCCTATTAACATCCCAC+GGG + chr3.1:36020641-36020660 None:intergenic 50.0%
GCGTCATCACTTGATGCCAT+TGG - chr3.1:36020828-36020847 MS.gene82596:intron 50.0%
GGCAACCCAAGTGAAAAGGA+TGG + chr3.1:36021475-36021494 None:intergenic 50.0%
GGCACCCTATTAACATCCCA+CGG + chr3.1:36020642-36020661 None:intergenic 50.0%
GGCATAAACCAGCAGTACTG+TGG + chr3.1:36022774-36022793 None:intergenic 50.0%
GGTGGGTCTGATATACCTCT+CGG - chr3.1:36022028-36022047 MS.gene82596:intron 50.0%
GTTCATCTGTCGCTGATGCT+GGG - chr3.1:36020859-36020878 MS.gene82596:intron 50.0%
TATGGGCGCGTCTCAAGATT+TGG - chr3.1:36020792-36020811 MS.gene82596:intron 50.0%
TATGGTGAATCCCGAGCCAA+AGG - chr3.1:36021737-36021756 MS.gene82596:intron 50.0%
TCATTTGCAGGCCAACAGGA+AGG + chr3.1:36023395-36023414 None:intergenic 50.0%
TCGTTGGGAAGTGATACTGG+TGG - chr3.1:36020717-36020736 MS.gene82596:CDS 50.0%
TGCTGGCAACCCAAGTGAAA+AGG + chr3.1:36021479-36021498 None:intergenic 50.0%
TTTGGACGAAGAGAGCGAGA+GGG + chr3.1:36021585-36021604 None:intergenic 50.0%
! AGAACCTAACCCTTTGGCTC+GGG + chr3.1:36021750-36021769 None:intergenic 50.0%
! CCTGTTGGCCTGCAAATGAT+TGG - chr3.1:36023396-36023415 MS.gene82596:CDS 50.0%
! CTTGATGCCATTGGCTGCTT+TGG - chr3.1:36020837-36020856 MS.gene82596:intron 50.0%
! GAATAGCTTCAAGGAAGCGC+TGG - chr3.1:36022316-36022335 MS.gene82596:intron 50.0%
! GATGTTAATAGGGTGCCAGG+AGG - chr3.1:36020645-36020664 MS.gene82596:CDS 50.0%
! GTGATACTGGTGGAAGTGTG+AGG - chr3.1:36020727-36020746 MS.gene82596:CDS 50.0%
! GTTTTTCTCCGTCTGTGGGT+GGG - chr3.1:36020501-36020520 MS.gene82596:intron 50.0%
! TGGGATGTTAATAGGGTGCC+AGG - chr3.1:36020642-36020661 MS.gene82596:CDS 50.0%
!! GAAGTCTGGGACTAGTTTGG+TGG - chr3.1:36019729-36019748 MS.gene82596:intron 50.0%
!! GGTGATGGTGGATGATGGAA+GGG + chr3.1:36018497-36018516 None:intergenic 50.0%
!! TGGTGATGGTGGATGATGGA+AGG + chr3.1:36018498-36018517 None:intergenic 50.0%
!!! CCTGCCTTGGTTTTACCATG+TGG - chr3.1:36023345-36023364 MS.gene82596:CDS 50.0%
!!! GCTGGTTTTTCTCCGTCTGT+GGG - chr3.1:36020497-36020516 MS.gene82596:intron 50.0%
!!! TGCTGGTTTTTCTCCGTCTG+TGG - chr3.1:36020496-36020515 MS.gene82596:intron 50.0%
AAGCAGCTGAAGGAGCTGCA+GGG + chr3.1:36022364-36022383 None:intergenic 55.0%
AAGCGTGAGAGAGTGGAACG+TGG + chr3.1:36018472-36018491 None:intergenic 55.0%
AAGGGAGGTGGAGGAAGGAA+CGG + chr3.1:36018669-36018688 None:intergenic 55.0%
AATAGGTGACTGCCAACCCG+TGG - chr3.1:36020622-36020641 MS.gene82596:CDS 55.0%
AGAGAGTGGAACGTGGGGTT+TGG + chr3.1:36018465-36018484 None:intergenic 55.0%
AGCGTGAGAGAGTGGAACGT+GGG + chr3.1:36018471-36018490 None:intergenic 55.0%
AGGAGGATCATCCGGAGGAT+CGG - chr3.1:36020662-36020681 MS.gene82596:CDS 55.0%
AGGGTGAGGATTTGAGAGGG+GGG + chr3.1:36018559-36018578 None:intergenic 55.0%
ATAGGTGACTGCCAACCCGT+GGG - chr3.1:36020623-36020642 MS.gene82596:CDS 55.0%
CAGTACTGTGGCCTGCTCAA+TGG + chr3.1:36022762-36022781 None:intergenic 55.0%
CCTTGACCGTAGAATCGCTG+CGG - chr3.1:36018720-36018739 MS.gene82596:intron 55.0%
CGCCCTACAAAGTCAGAGAC+TGG + chr3.1:36019438-36019457 None:intergenic 55.0%
CTTGACCGTAGAATCGCTGC+GGG - chr3.1:36018721-36018740 MS.gene82596:intron 55.0%
CTTGAGACGCGCCCATATGT+TGG + chr3.1:36020789-36020808 None:intergenic 55.0%
GAATCCCGAGCCAAAGGGTT+AGG - chr3.1:36021743-36021762 MS.gene82596:intron 55.0%
GACGGCGGTGAAGAGAGTTA+AGG - chr3.1:36018864-36018883 MS.gene82596:intron 55.0%
GAGAGTAGCTTGGGTGGTGA+TGG + chr3.1:36018512-36018531 None:intergenic 55.0%
GCAACAAGCACACCAGCAAG+AGG + chr3.1:36018760-36018779 None:intergenic 55.0%
GCGAAGGGTGAGGATTTGAG+AGG + chr3.1:36018563-36018582 None:intergenic 55.0%
GCTTTATGGGGCAGCAGCTA+TGG - chr3.1:36020327-36020346 MS.gene82596:intron 55.0%
GGATTGAATGAGGTCGGTGG+CGG + chr3.1:36018611-36018630 None:intergenic 55.0%
GGGACATATGCCCTTTCAGC+TGG - chr3.1:36021941-36021960 MS.gene82596:intron 55.0%
GGGGTGTGTGAGAGTAGCTT+GGG + chr3.1:36018521-36018540 None:intergenic 55.0%
GGGTGAGGTGGGATTGAATG+AGG + chr3.1:36018621-36018640 None:intergenic 55.0%
GGTGGGTCGAGGATACTTGA+GGG - chr3.1:36018820-36018839 MS.gene82596:intron 55.0%
GGTTCATCTGTCGCTGATGC+TGG - chr3.1:36020858-36020877 MS.gene82596:intron 55.0%
GTGGGATTGAATGAGGTCGG+TGG + chr3.1:36018614-36018633 None:intergenic 55.0%
GTGTGTGAGAGTAGCTTGGG+TGG + chr3.1:36018518-36018537 None:intergenic 55.0%
TAAGCAGCTGAAGGAGCTGC+AGG + chr3.1:36022365-36022384 None:intergenic 55.0%
TTAGCCAACCCACCCACAGA+CGG + chr3.1:36020512-36020531 None:intergenic 55.0%
TTCACCGCCGTCGCATCAAA+CGG + chr3.1:36018856-36018875 None:intergenic 55.0%
TTGGACGAAGAGAGCGAGAG+GGG + chr3.1:36021584-36021603 None:intergenic 55.0%
! AAGGGAGAAGCGTGAGAGAG+TGG + chr3.1:36018479-36018498 None:intergenic 55.0%
! AGGCAGCCGGCATCATTTTG+CGG - chr3.1:36020747-36020766 MS.gene82596:CDS 55.0%
! GGTTTTTCTCCGTCTGTGGG+TGG - chr3.1:36020500-36020519 MS.gene82596:intron 55.0%
! TGGTGGGTCGAGGATACTTG+AGG - chr3.1:36018819-36018838 MS.gene82596:intron 55.0%
!! AGAGCTCTGAGCCATTGAGC+AGG - chr3.1:36022748-36022767 MS.gene82596:intron 55.0%
!! AGTAGCTTGGGTGGTGATGG+TGG + chr3.1:36018509-36018528 None:intergenic 55.0%
!! GAGAGCGCCATACGAAGTCT+GGG - chr3.1:36019716-36019735 MS.gene82596:intron 55.0%
!! GTGTGGGGTTAGTGTTGGTG+AGG - chr3.1:36020013-36020032 MS.gene82596:intron 55.0%
!! TGAGAGCGCCATACGAAGTC+TGG - chr3.1:36019715-36019734 MS.gene82596:intron 55.0%
!! TGGGTGGTGATGGTGGATGA+TGG + chr3.1:36018502-36018521 None:intergenic 55.0%
AACTGCAGCTGCCGATCCTC+CGG + chr3.1:36020676-36020695 None:intergenic 60.0%
AGCAGCTGAAGGAGCTGCAG+GGG + chr3.1:36022363-36022382 None:intergenic 60.0%
ATCCTCGACCCACCAGTCGA+CGG + chr3.1:36018814-36018833 None:intergenic 60.0%
ATCGCTGCGGGCGAGGAAAT+TGG - chr3.1:36018733-36018752 MS.gene82596:intron 60.0%
ATTGGTCGGAAGGGAGGTGG+AGG + chr3.1:36018678-36018697 None:intergenic 60.0%
CAAGGTCATGTGCCTGAGCG+AGG + chr3.1:36018705-36018724 None:intergenic 60.0%
CCAAGGCAGGTAGTCCAGCT+AGG + chr3.1:36023335-36023354 None:intergenic 60.0%
CCGCAGCGATTCTACGGTCA+AGG + chr3.1:36018723-36018742 None:intergenic 60.0%
CCTAGCTGGACTACCTGCCT+TGG - chr3.1:36023332-36023351 MS.gene82596:CDS 60.0%
GAAGGAACGGAGGTGGGGTT+CGG + chr3.1:36018656-36018675 None:intergenic 60.0%
GAGGATTTGAGAGGGGGGTG+CGG + chr3.1:36018554-36018573 None:intergenic 60.0%
GATCCTCCGGATGATCCTCC+TGG + chr3.1:36020663-36020682 None:intergenic 60.0%
GCGTGAGAGAGTGGAACGTG+GGG + chr3.1:36018470-36018489 None:intergenic 60.0%
GTCATGTGCCTGAGCGAGGA+GGG + chr3.1:36018701-36018720 None:intergenic 60.0%
GTGGAGGAAGGAACGGAGGT+GGG + chr3.1:36018662-36018681 None:intergenic 60.0%
TCGGCCTCCGTTTGATGCGA+CGG - chr3.1:36018846-36018865 MS.gene82596:intron 60.0%
TGAGCAGGCCACAGTACTGC+TGG - chr3.1:36022763-36022782 MS.gene82596:intron 60.0%
TGGAGGAAGGAACGGAGGTG+GGG + chr3.1:36018661-36018680 None:intergenic 60.0%
TTCTCCGTCTGTGGGTGGGT+TGG - chr3.1:36020505-36020524 MS.gene82596:intron 60.0%
! AGGGTGCCAGGAGGATCATC+CGG - chr3.1:36020654-36020673 MS.gene82596:CDS 60.0%
! CTGACATGCCGTCGACTGGT+GGG - chr3.1:36018803-36018822 MS.gene82596:intron 60.0%
! CTGAGCGAGGAGGGATTGGT+CGG + chr3.1:36018692-36018711 None:intergenic 60.0%
! GAGAGCGAGAGGGGTACATG+AGG + chr3.1:36021575-36021594 None:intergenic 60.0%
! GGAACGTGGGGTTTGGAGTG+TGG + chr3.1:36018458-36018477 None:intergenic 60.0%
! GGGGGTGTGTGAGAGTAGCT+TGG + chr3.1:36018522-36018541 None:intergenic 60.0%
! TGGTGGAAGTGTGAGGCAGC+CGG - chr3.1:36020734-36020753 MS.gene82596:CDS 60.0%
!! AATGAGGTCGGTGGCGGAGA+GGG + chr3.1:36018605-36018624 None:intergenic 60.0%
!! CGAGGAGGGATTGGTCGGAA+GGG + chr3.1:36018687-36018706 None:intergenic 60.0%
!! GGAGAGGGTGTTGGTGCGAA+GGG + chr3.1:36018590-36018609 None:intergenic 60.0%
!! GGATCGACTGGCCTTCCTGT+TGG - chr3.1:36023381-36023400 MS.gene82596:CDS 60.0%
ACCGCCGTCGCATCAAACGG+AGG + chr3.1:36018853-36018872 None:intergenic 65.0%
ACGGCTGACATGCCGTCGAC+TGG - chr3.1:36018799-36018818 MS.gene82596:intron 65.0%
CCTCGCCCGCAGCGATTCTA+CGG + chr3.1:36018729-36018748 None:intergenic 65.0%
CGACCAATCCCTCCTCGCTC+AGG - chr3.1:36018690-36018709 MS.gene82596:intron 65.0%
CGGCAGCTGCAGTTTCTGCC+AGG - chr3.1:36020682-36020701 MS.gene82596:CDS 65.0%
GAAGGGAGTGGCGAAGGGTG+AGG + chr3.1:36018573-36018592 None:intergenic 65.0%
GCCTCCGTTTGATGCGACGG+CGG - chr3.1:36018849-36018868 MS.gene82596:intron 65.0%
GGAGGTGGAGGAAGGAACGG+AGG + chr3.1:36018666-36018685 None:intergenic 65.0%
GGTCATGTGCCTGAGCGAGG+AGG + chr3.1:36018702-36018721 None:intergenic 65.0%
GGTGCGAAGGGAGTGGCGAA+GGG + chr3.1:36018578-36018597 None:intergenic 65.0%
GGTGGAGGAAGGAACGGAGG+TGG + chr3.1:36018663-36018682 None:intergenic 65.0%
GTCGGAAGGGAGGTGGAGGA+AGG + chr3.1:36018674-36018693 None:intergenic 65.0%
GTGCCAGGAGGATCATCCGG+AGG - chr3.1:36020657-36020676 MS.gene82596:CDS 65.0%
GTGCCTGAGCGAGGAGGGAT+TGG + chr3.1:36018696-36018715 None:intergenic 65.0%
TGGTGCGAAGGGAGTGGCGA+AGG + chr3.1:36018579-36018598 None:intergenic 65.0%
! GATTTGAGAGGGGGGTGCGG+TGG + chr3.1:36018551-36018570 None:intergenic 65.0%
! GCTGACATGCCGTCGACTGG+TGG - chr3.1:36018802-36018821 MS.gene82596:intron 65.0%
! GGAGGTGGGGTTCGGTCAGA+CGG + chr3.1:36018648-36018667 None:intergenic 65.0%
!! CGGAGAGGGTGTTGGTGCGA+AGG + chr3.1:36018591-36018610 None:intergenic 65.0%
!! GAATGAGGTCGGTGGCGGAG+AGG + chr3.1:36018606-36018625 None:intergenic 65.0%
!! GCGAGGAGGGATTGGTCGGA+AGG + chr3.1:36018688-36018707 None:intergenic 65.0%
!! GGAGGGATTGGTCGGAAGGG+AGG + chr3.1:36018684-36018703 None:intergenic 65.0%
!! GGGATTGGTCGGAAGGGAGG+TGG + chr3.1:36018681-36018700 None:intergenic 65.0%
!! GGGTGTTGGTGCGAAGGGAG+TGG + chr3.1:36018585-36018604 None:intergenic 65.0%
CAGACGGAGGCGGGTGAGGT+GGG + chr3.1:36018632-36018651 None:intergenic 70.0%
CCGTAGAATCGCTGCGGGCG+AGG - chr3.1:36018726-36018745 MS.gene82596:intron 70.0%
TCAGACGGAGGCGGGTGAGG+TGG + chr3.1:36018633-36018652 None:intergenic 70.0%
! AGGGGGGTGCGGTGGTAGGT+TGG + chr3.1:36018543-36018562 None:intergenic 70.0%
! GGGGGGTGCGGTGGTAGGTT+GGG + chr3.1:36018542-36018561 None:intergenic 70.0%
! GGGGGTGCGGTGGTAGGTTG+GGG + chr3.1:36018541-36018560 None:intergenic 70.0%
! GGGGTGCGGTGGTAGGTTGG+GGG + chr3.1:36018540-36018559 None:intergenic 70.0%
! GGGGTTCGGTCAGACGGAGG+CGG + chr3.1:36018642-36018661 None:intergenic 70.0%
! GGGTTCGGTCAGACGGAGGC+GGG + chr3.1:36018641-36018660 None:intergenic 70.0%
! GGTGGGGTTCGGTCAGACGG+AGG + chr3.1:36018645-36018664 None:intergenic 70.0%
! TGAGAGGGGGGTGCGGTGGT+AGG + chr3.1:36018547-36018566 None:intergenic 70.0%
! TGCCGTCGACTGGTGGGTCG+AGG - chr3.1:36018809-36018828 MS.gene82596:intron 70.0%
!! GTCGGTGGCGGAGAGGGTGT+TGG + chr3.1:36018599-36018618 None:intergenic 70.0%
CGGTCAGACGGAGGCGGGTG+AGG + chr3.1:36018636-36018655 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 36018442 36023500 36018442 ID=MS.gene82596
chr3.1 mRNA 36018442 36023500 36018442 ID=MS.gene82596.t1;Parent=MS.gene82596
chr3.1 exon 36022976 36023500 36022976 ID=MS.gene82596.t1.exon1;Parent=MS.gene82596.t1
chr3.1 CDS 36022976 36023500 36022976 ID=cds.MS.gene82596.t1;Parent=MS.gene82596.t1
chr3.1 exon 36021004 36021315 36021004 ID=MS.gene82596.t1.exon2;Parent=MS.gene82596.t1
chr3.1 CDS 36021004 36021315 36021004 ID=cds.MS.gene82596.t1;Parent=MS.gene82596.t1
chr3.1 exon 36020604 36020783 36020604 ID=MS.gene82596.t1.exon3;Parent=MS.gene82596.t1
chr3.1 CDS 36020604 36020783 36020604 ID=cds.MS.gene82596.t1;Parent=MS.gene82596.t1
chr3.1 exon 36020385 36020479 36020385 ID=MS.gene82596.t1.exon4;Parent=MS.gene82596.t1
chr3.1 CDS 36020385 36020479 36020385 ID=cds.MS.gene82596.t1;Parent=MS.gene82596.t1
chr3.1 exon 36020170 36020245 36020170 ID=MS.gene82596.t1.exon5;Parent=MS.gene82596.t1
chr3.1 CDS 36020170 36020245 36020170 ID=cds.MS.gene82596.t1;Parent=MS.gene82596.t1
chr3.1 exon 36019945 36020022 36019945 ID=MS.gene82596.t1.exon6;Parent=MS.gene82596.t1
chr3.1 CDS 36019945 36020022 36019945 ID=cds.MS.gene82596.t1;Parent=MS.gene82596.t1
chr3.1 exon 36019550 36019643 36019550 ID=MS.gene82596.t1.exon7;Parent=MS.gene82596.t1
chr3.1 CDS 36019550 36019643 36019550 ID=cds.MS.gene82596.t1;Parent=MS.gene82596.t1
chr3.1 exon 36019416 36019465 36019416 ID=MS.gene82596.t1.exon8;Parent=MS.gene82596.t1
chr3.1 CDS 36019416 36019465 36019416 ID=cds.MS.gene82596.t1;Parent=MS.gene82596.t1
chr3.1 exon 36018442 36018621 36018442 ID=MS.gene82596.t1.exon9;Parent=MS.gene82596.t1
chr3.1 CDS 36018442 36018621 36018442 ID=cds.MS.gene82596.t1;Parent=MS.gene82596.t1
Gene Sequence

>MS.gene82596

ATGAAAATGCTATCCACACTCCAAACCCCACGTTCCACTCTCTCACGCTTCTCCCTTCCATCATCCACCATCACCACCCAAGCTACTCTCACACACCCCCAACCTACCACCGCACCCCCCTCTCAAATCCTCACCCTTCGCCACTCCCTTCGCACCAACACCCTCTCCGCCACCGACCTCATTCAATCCCACCTCACCCGCCTCCGTCTGACCGAACCCCACCTCCGTTCCTTCCTCCACCTCCCTTCCGACCAATCCCTCCTCGCTCAGGCACATGACCTTGACCGTAGAATCGCTGCGGGCGAGGAAATTGGTCCTCTTGCTGGTGTGCTTGTTGCTGTTAAGGATAATATTTGTACGGCTGACATGCCGTCGACTGGTGGGTCGAGGATACTTGAGGGTTATCGGCCTCCGTTTGATGCGACGGCGGTGAAGAGAGTTAAGGAGTTGGGTGGGATTGTTGTTGGGAAGACGAATATGGATGAGTTTGGTATGGGGAGTACCACTGAAGCTTCTGCATTTCAGGTTCTTACCCTCTCTTTATATATATTTTCAATTTCAAGTTTGTTTTTTTTATGTTTATTCATATACCTTATTTGAAACTTTGAACCATAATTTAAATTTTAAAGTGAATATTAATCTCAGGTTCTCTGAGTGTGTTAATGTTAATCTGAAGTTAGTTTTTTTGTTTGTTTGGCACACCACAATTTAGGTCCTTGAACTTGCTGTCATATTGGTCTCTGAACGTATTGATATTGCAAACACATCCACAAGTGCATTTTTTATTAGTCATTTTAGTCCTCAAATCTGTTTTTAGGTTGTTAATTTAATCTTTGAATGTGTTTTTCCTTGGTTAATTTAGTCCTTAAAATTATTGTCAAATTAGGTGCCAGGGATGTGTTTGCAATTTCAATAACTTTAGGGACTATAGCTACATCGTCTCATACATTCCTAGTTAATTTTATTTCAATTCATTTTAAGTAAACCACCAAACCAGTCTCTGACTTTGTAGGGCGTTCTCAGATAGGTCTCTGAGATTATGAGTGTTTGAAAAAAGGTTCGTGACTCTGTTAAATTTTACTCTCATATTATATCTTCTGAGTATGTTAGGGACTAAATTGATAGTAAGCGGTTAAATGTAGGGAATAAATTGATGGTAAGTTGTTAAAATATAGGGACCTAATTGATAGCAAGTGGTTAAATAAAGGGATCAATTTGAAAGTTTAATAGAGTCGGTGACTTTTTCCAATATTTATAATGTCAGGGACCTATTTGAGAGCGCCATACGAAGTCTGGGACTAGTTTGGTGGTTTATTAAATCCATTTCATATTCTTTTTTTGCTGTGTTGTAGTGCATTTCTGTTTTGGTTTTTTTTTTTTTATCCGGTAGTTGTTTGTTTGTTTGTTTGTTTTGTTGATTTTGAAGATCAGTGTGTTTTTGTTTTCCAGTTTGGGTGGACATTTAAGCTGAATTAAAATTTAGTTTGTATGCTACCCTTGTTTTTTGAACTTTTAGATATATATTTTATAATTGTTGATGATTTTAATATGAGAGATTCTTAGATACATTAGTGTGGGGTTAGTGTTGGTGAGGAATCATGATGTTTGATGATCCATTTGGCTGATGTCAGTCATGTTGAGCGGTGTGATAAAAGAATAGTGTCGTATGCTAGGTGCATCTAAGAATGTCTCCTCTCAAATTTCAAATGTCCAGTTTGTAATGTTAGTAGTAAATGTGAGAAGGTTTGAGTGGTGACATTATGTGGTTACTTGATTCAGATATCTTGTGTTTAACAATTGAATTAAATTTGTGAGCATGGGTTCCAGCATTTATTTGGAGAGAAAATGAGAAGAATGAAAATTGCAAATCGGATATCCTACAGTTGCTTTATGGGGCAGCAGCTATGGAGACCATTATATTTAAGACGTAGAGAGAGATTGTAGAAGATCTGAGTCAGCTGAAAATTGTTGACGAATGACCTGATGGATGCATAATGTGATGCATTGCTAAATTTGTATTTTTGTCATTACAAAACATACAAAAAGTGGGGTTGTGCTGGTTTTTCTCCGTCTGTGGGTGGGTTGGCTAAGCTTTGATAGAGTTCTGTTTGTAGCTTTATTACTTGTATCGCCCATTTATAACTGAGATATGTTTACTCAGGTGATGCATATGTTAATTCAATAGGTGACTGCCAACCCGTGGGATGTTAATAGGGTGCCAGGAGGATCATCCGGAGGATCGGCAGCTGCAGTTTCTGCCAGGCAATGTGTTGTATCGTTGGGAAGTGATACTGGTGGAAGTGTGAGGCAGCCGGCATCATTTTGCGGTGTTGTAGGTTTGAAGCCAACATATGGGCGCGTCTCAAGATTTGGACTCATGGCGTATGCGTCATCACTTGATGCCATTGGCTGCTTTGGTTCATCTGTCGCTGATGCTGGGATTCTCCTCCATGCAATTGCTGGTCATGATAGATTTGATGCCACATCAAGTAAGCAGGTATGAGTTTTTCACCATGTTTGGTAAAAATGTTGTTAGCTTTCTTTTTTTCATTATTAGCAATGGTCATTGACGACAATGTTTGGTATAGTCTCGGGCTCTTTGTTAAATATGAAGGGTAATTGCTTAAGTTGTTCTTGTGTTCATTTGTTTTGTTACCTTGTTATTAAGCCAATTAATTACCTTTTAACAATGAATAGCTAACAATGTAATTTATCAGGAGGTGCCCAATTTTCTATCTCATTTTGACTATGCAAGTTCTTTGGAAAGTAAGCCCTTGAAAGGACTGAGAATTGGTTTGATTCGTGAAACTATTGAAGATGGTGTTGATGCTGGAGTAGTTTCTGCAATTCGTGATGCTGCTTCACATTTTGAGGCATTAGGATGCTCTGTGAACGAGGTCCTCCACTTCATTTTTCTCTATAACTCTGATCTGAATGATAATTTTTTAAGTTGCTTTACAAGCTTATGTTATTAGAATTCATTTGTTAGTTAACCCTTTTCATCTGTCCATTAACTTACAGGTGTCACTGCCATCCTTTTCACTTGGGTTGCCAGCATACTATGTCCTCGCTTTGTCTGAATCATCTTCCAACTTGTCTCGCTATGATGGTATTAGGTCAGTGGCTGACTCCTCATGTACCCCTCTCGCTCTCTTCGTCCAAATACACACAACCGAACACAATGTTTTATTTTGTGTTGTTTATTTTCATTGATAATCATTTTGTTTGGCTTGGGTCCACCTTCTCTATATCTAGATATGGAAACCAAGTTTATGCTGATGAGCTAGACTCTCTCTATGGTGAATCCCGAGCCAAAGGGTTAGGTTCTGAGGTACACACCTTTCAATCCTTCTTAATTTCAAATTTGGCTGCAAGATTTTTGATAGCATTATGTGTAAATATACCTGTATAAAAGAATTGATCCAATTTTATATGCATTGGTATTTTGAGCTGGCTTTCTATTTTTAATACATTTCAGGTGAAAATGAGAATTTTGATGGGGACATATGCCCTTTCAGCTGGTTACTATGATGCATATTACAAACGAGCGCAGCAGGTACTGCTAACTTTATTTTATGTTTTTCTTGGTGGGTCTGATATACCTCTCGGTTCTTCTTAACCCAATGATAATGAATTCAGTCACAGGACTCAGATTAATATATGTTGCTTAAAGAAATTTATAATGTTTCACGATTTCATTCATACACGATATACGTCCACTCCTGTTCTTTACGTGTCTTTTAGAATATGATTAAACTCTTGCTTCATTTCCTAGGTTGTCTTATCAGCGTTCTGAATTTCATTTATTTTAGAAGTTTGGGATCTACAAGGCCTTTTATGCGTGTTCTATGTAACAGGTGAGAACCATTATAAGGAATAGCTTCAAGGAAGCGCTGGACCAATATGATATCTTGATTTCCCCTGCAGCTCCTTCAGCTGCTTATAAAATTGGTTAGCACCTGTGTAGCTTTCCTTTTGCATTATTGCATGTTAGTGCCTGTAATTGTAATCGTTCTCTTTCTTTGACATTTGCAGGTGAAAAGAAAAATGATCCTTTGGCTATGTATGCTGGTGACATCATGACTGTAAGTATTTCATTCTTCTTATTGGCTAGATTTCTGTGTCATACTTCTGAATTCCGATCTCATTATATGTTGTTAATGTTAACTAGACAAATAATGTTAATCATATGTTAATGTTAACTAGACAAATAGTGTTAGTTTGAGGTTTGGAGTTGTACTATTGAACTTCAACTCCATTGAAATTAAACTTGATTCATACACGAGTACGAGTTACTAAAGTTTATAGAGCTCTGAGCCATTGAGCAGGCCACAGTACTGCTGGTTTATGCCTTAGATGGTATATATTCAATCTAAACAATCCAAGAAATATCTTAATTAATCAATAACTGCCGGGTCGTTGCATATTGTAGTACCTTAACATGTGTCAAGTATATATTATTGTGAGTTCTAGACTTCTAGTTACTCCATAAAGGAGTATCCCAGCGAATGAAGTCATCAGTTAGCATAAGCTGTGTTGAATTAGAGAAAATAGAGGCATGATTTTGAAACCGTGTCTCAACTACACAGCAGAGTCAATTTTATATAGGCTAAAGACAATAAATACAACATAAATATTGGAGATATTTTTCTTATTTACTTTATGTGCTATGATACAATATGCCTAAACAATAATCCTATACAATAAATATAGAGACGTGAATAATTTTTCAACAAGTTGCATAACTAGTTATGCACCCAGTGGTTTAGAGAGTTTGATCTTTATGCATTATCTGTAATTTTATTTCTAGCTACTCAGTTTACATGAAATGCCGAGCATAATGTTTGCTTTTCTTTATTGGTGGTTTTTCTTTTTATAGGTAAATGTCAACCTAGCTGGACTACCTGCCTTGGTTTTACCATGTGGATTTATTGAGAATGGATCGACTGGCCTTCCTGTTGGCCTGCAAATGATTGGTGCAGCATTTAATGAGGTATTGAGTTTTCTTATGAACTACACTAAACTTCGTGTTGACGGGGCTTCTCTATGCATCTTCTAG
Protein sequence

>MS.gene82596.t1

MKMLSTLQTPRSTLSRFSLPSSTITTQATLTHPQPTTAPPSQILTLRHSLRTNTLSATDLIQSHLTRLRLTEPHLRSFLHLPSDQSLLAQAHDLDRRIAAGEEIGPLAGVLVAVKDNICTADMPSTGGSRILEGYRPPFDATAVKRVKELGGIVVGKTNMDEFGMGSTTEASAFQVTANPWDVNRVPGGSSGGSAAAVSARQCVVSLGSDTGGSVRQPASFCGVVGLKPTYGRVSRFGLMAYASSLDAIGCFGSSVADAGILLHAIAGHDRFDATSSKQEVPNFLSHFDYASSLESKPLKGLRIGLIRETIEDGVDAGVVSAIRDAASHFEALGCSVNEVSLPSFSLGLPAYYVLALSESSSNLSRYDGIRYGNQVYADELDSLYGESRAKGLGSEVKMRILMGTYALSAGYYDAYYKRAQQVRTIIRNSFKEALDQYDILISPAAPSAAYKIGEKKNDPLAMYAGDIMTVNVNLAGLPALVLPCGFIENGSTGLPVGLQMIGAAFNEVLSFLMNYTKLRVDGASLCIF