Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84365.t1 | XP_003598225.1 | 96.3 | 461 | 17 | 0 | 1 | 461 | 67 | 527 | 2.80E-259 | 904 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84365.t1 | Q9STY3 | 57.3 | 473 | 189 | 6 | 1 | 461 | 123 | 594 | 4.9e-148 | 525.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84365.t1 | G7IYH9 | 96.3 | 461 | 17 | 0 | 1 | 461 | 67 | 527 | 2.0e-259 | 904.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene059222 | MS.gene84365 | PPI |
MS.gene84365 | MS.gene48246 | PPI |
MS.gene48248 | MS.gene84365 | PPI |
MS.gene48247 | MS.gene84365 | PPI |
MS.gene45853 | MS.gene84365 | PPI |
MS.gene84365 | MS.gene48922 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84365.t1 | MTR_3g008640 | 96.312 | 461 | 17 | 0 | 1 | 461 | 67 | 527 | 0.0 | 939 |
MS.gene84365.t1 | MTR_3g033690 | 94.577 | 461 | 24 | 1 | 1 | 461 | 67 | 526 | 0.0 | 920 |
MS.gene84365.t1 | MTR_3g008720 | 96.095 | 461 | 18 | 0 | 1 | 461 | 67 | 527 | 0.0 | 914 |
MS.gene84365.t1 | MTR_3g008700 | 95.879 | 461 | 19 | 0 | 1 | 461 | 67 | 527 | 0.0 | 911 |
MS.gene84365.t1 | MTR_7g053360 | 95.228 | 461 | 22 | 0 | 1 | 461 | 67 | 527 | 0.0 | 909 |
MS.gene84365.t1 | MTR_4g035980 | 67.164 | 469 | 144 | 4 | 1 | 461 | 73 | 539 | 0.0 | 658 |
MS.gene84365.t1 | MTR_4g025690 | 58.124 | 437 | 170 | 8 | 26 | 461 | 89 | 513 | 8.05e-171 | 490 |
MS.gene84365.t1 | MTR_4g025730 | 50.538 | 465 | 209 | 10 | 2 | 461 | 61 | 509 | 1.97e-154 | 448 |
MS.gene84365.t1 | MTR_8g104655 | 46.888 | 482 | 227 | 7 | 1 | 461 | 68 | 541 | 1.90e-150 | 439 |
MS.gene84365.t1 | MTR_7g108905 | 49.095 | 442 | 200 | 9 | 36 | 457 | 116 | 552 | 3.24e-142 | 419 |
MS.gene84365.t1 | MTR_7g050980 | 49.119 | 454 | 208 | 10 | 22 | 461 | 111 | 555 | 3.70e-139 | 411 |
MS.gene84365.t1 | MTR_8g104645 | 56.342 | 339 | 143 | 2 | 127 | 461 | 35 | 372 | 7.00e-138 | 401 |
MS.gene84365.t1 | MTR_7g050870 | 48.678 | 454 | 210 | 11 | 22 | 461 | 110 | 554 | 2.20e-136 | 404 |
MS.gene84365.t1 | MTR_7g050950 | 51.338 | 411 | 181 | 10 | 63 | 461 | 150 | 553 | 5.86e-135 | 400 |
MS.gene84365.t1 | MTR_4g087980 | 49.318 | 440 | 197 | 10 | 36 | 461 | 89 | 516 | 2.12e-132 | 392 |
MS.gene84365.t1 | MTR_4g025670 | 46.759 | 432 | 214 | 6 | 36 | 461 | 68 | 489 | 4.48e-131 | 388 |
MS.gene84365.t1 | MTR_3g091380 | 43.725 | 494 | 239 | 12 | 2 | 461 | 109 | 597 | 4.67e-131 | 392 |
MS.gene84365.t1 | MTR_2g044880 | 48.301 | 412 | 206 | 6 | 53 | 461 | 118 | 525 | 4.47e-130 | 387 |
MS.gene84365.t1 | MTR_8g023310 | 46.476 | 454 | 212 | 9 | 36 | 461 | 139 | 589 | 8.40e-128 | 383 |
MS.gene84365.t1 | MTR_4g087970 | 44.796 | 442 | 230 | 6 | 30 | 461 | 80 | 517 | 1.54e-126 | 377 |
MS.gene84365.t1 | MTR_1g008140 | 43.441 | 465 | 227 | 10 | 31 | 461 | 145 | 607 | 6.59e-125 | 376 |
MS.gene84365.t1 | MTR_8g104580 | 42.531 | 482 | 215 | 9 | 1 | 461 | 60 | 500 | 3.76e-124 | 370 |
MS.gene84365.t1 | MTR_7g108900 | 42.827 | 467 | 222 | 9 | 36 | 461 | 98 | 560 | 4.59e-120 | 362 |
MS.gene84365.t1 | MTR_7g112580 | 46.455 | 409 | 193 | 7 | 68 | 461 | 145 | 542 | 5.34e-120 | 361 |
MS.gene84365.t1 | MTR_2g044810 | 42.956 | 433 | 232 | 8 | 36 | 461 | 110 | 534 | 3.47e-119 | 359 |
MS.gene84365.t1 | MTR_4g124520 | 43.294 | 425 | 225 | 8 | 46 | 461 | 104 | 521 | 6.21e-119 | 358 |
MS.gene84365.t1 | MTR_3g010780 | 43.243 | 481 | 243 | 11 | 2 | 461 | 103 | 574 | 1.94e-118 | 358 |
MS.gene84365.t1 | MTR_1g083520 | 43.737 | 471 | 247 | 9 | 7 | 461 | 60 | 528 | 1.15e-117 | 355 |
MS.gene84365.t1 | MTR_8g042900 | 44.898 | 441 | 219 | 9 | 36 | 461 | 150 | 581 | 1.22e-117 | 357 |
MS.gene84365.t1 | MTR_1g054880 | 43.803 | 468 | 213 | 11 | 36 | 461 | 99 | 558 | 1.96e-117 | 355 |
MS.gene84365.t1 | MTR_1g088020 | 43.991 | 466 | 217 | 11 | 36 | 461 | 94 | 555 | 9.62e-116 | 351 |
MS.gene84365.t1 | MTR_8g042910 | 51.051 | 333 | 156 | 4 | 134 | 461 | 282 | 612 | 1.23e-115 | 352 |
MS.gene84365.t1 | MTR_3g010770 | 56.690 | 284 | 121 | 2 | 178 | 461 | 294 | 575 | 3.66e-112 | 342 |
MS.gene84365.t1 | MTR_7g108875 | 42.060 | 466 | 225 | 10 | 36 | 461 | 104 | 564 | 1.42e-111 | 340 |
MS.gene84365.t1 | MTR_7g108890 | 50.751 | 333 | 157 | 4 | 134 | 461 | 232 | 562 | 2.18e-111 | 340 |
MS.gene84365.t1 | MTR_1g088225 | 43.348 | 466 | 218 | 12 | 36 | 461 | 94 | 553 | 1.03e-109 | 335 |
MS.gene84365.t1 | MTR_0458s0030 | 57.194 | 278 | 113 | 4 | 187 | 461 | 40 | 314 | 4.03e-109 | 325 |
MS.gene84365.t1 | MTR_1g088040 | 57.194 | 278 | 113 | 4 | 187 | 461 | 40 | 314 | 4.03e-109 | 325 |
MS.gene84365.t1 | MTR_8g023150 | 40.998 | 461 | 245 | 9 | 21 | 461 | 129 | 582 | 6.76e-106 | 326 |
MS.gene84365.t1 | MTR_0618s0020 | 61.842 | 228 | 86 | 1 | 234 | 461 | 2 | 228 | 2.73e-103 | 307 |
MS.gene84365.t1 | MTR_4g124550 | 39.741 | 463 | 244 | 8 | 26 | 461 | 139 | 593 | 4.69e-103 | 319 |
MS.gene84365.t1 | MTR_1g083470 | 39.278 | 443 | 243 | 9 | 37 | 457 | 128 | 566 | 2.91e-100 | 312 |
MS.gene84365.t1 | MTR_1g083500 | 39.278 | 443 | 243 | 9 | 37 | 457 | 128 | 566 | 2.91e-100 | 312 |
MS.gene84365.t1 | MTR_1g083510 | 36.056 | 502 | 273 | 12 | 2 | 460 | 86 | 582 | 3.78e-99 | 309 |
MS.gene84365.t1 | MTR_1g083490 | 37.060 | 483 | 271 | 10 | 2 | 457 | 95 | 571 | 9.00e-99 | 308 |
MS.gene84365.t1 | MTR_4g005170 | 37.267 | 483 | 270 | 10 | 2 | 457 | 95 | 571 | 1.10e-98 | 309 |
MS.gene84365.t1 | MTR_4g005180 | 36.853 | 483 | 272 | 10 | 2 | 457 | 77 | 553 | 2.39e-97 | 304 |
MS.gene84365.t1 | MTR_1g086210 | 43.626 | 353 | 190 | 5 | 116 | 461 | 219 | 569 | 2.42e-94 | 296 |
MS.gene84365.t1 | MTR_2g044810 | 51.575 | 254 | 121 | 2 | 208 | 461 | 214 | 465 | 1.60e-92 | 288 |
MS.gene84365.t1 | MTR_4g120290 | 38.140 | 430 | 230 | 8 | 37 | 460 | 172 | 571 | 7.06e-92 | 290 |
MS.gene84365.t1 | MTR_3g095920 | 38.217 | 471 | 235 | 14 | 20 | 450 | 99 | 553 | 4.38e-91 | 287 |
MS.gene84365.t1 | MTR_7g112590 | 35.800 | 500 | 274 | 13 | 2 | 460 | 89 | 582 | 1.01e-90 | 287 |
MS.gene84365.t1 | MTR_8g093460 | 37.602 | 492 | 247 | 17 | 2 | 453 | 72 | 543 | 1.20e-90 | 286 |
MS.gene84365.t1 | MTR_1g086190 | 38.330 | 467 | 257 | 11 | 22 | 461 | 101 | 563 | 1.27e-90 | 286 |
MS.gene84365.t1 | MTR_4g120280 | 38.140 | 430 | 230 | 9 | 37 | 460 | 172 | 571 | 2.03e-90 | 286 |
MS.gene84365.t1 | MTR_8g088610 | 42.690 | 342 | 191 | 3 | 118 | 458 | 36 | 373 | 5.89e-90 | 278 |
MS.gene84365.t1 | MTR_2g436040 | 38.084 | 407 | 232 | 8 | 66 | 458 | 143 | 543 | 9.28e-90 | 285 |
MS.gene84365.t1 | MTR_2g044660 | 46.815 | 314 | 160 | 5 | 148 | 461 | 326 | 632 | 3.40e-88 | 282 |
MS.gene84365.t1 | MTR_7g110440 | 36.229 | 472 | 277 | 10 | 2 | 461 | 115 | 574 | 3.81e-86 | 275 |
MS.gene84365.t1 | MTR_7g110490 | 36.188 | 467 | 254 | 11 | 31 | 456 | 106 | 569 | 2.62e-84 | 270 |
MS.gene84365.t1 | MTR_7g110510 | 36.188 | 467 | 254 | 11 | 31 | 456 | 106 | 569 | 2.62e-84 | 270 |
MS.gene84365.t1 | MTR_2g436050 | 37.440 | 414 | 236 | 7 | 66 | 460 | 154 | 563 | 4.70e-83 | 266 |
MS.gene84365.t1 | MTR_5g083620 | 38.764 | 356 | 206 | 7 | 112 | 461 | 7 | 356 | 6.67e-80 | 252 |
MS.gene84365.t1 | MTR_7g110560 | 40.000 | 340 | 195 | 4 | 127 | 461 | 214 | 549 | 5.56e-76 | 248 |
MS.gene84365.t1 | MTR_7g110420 | 39.496 | 357 | 193 | 6 | 127 | 461 | 231 | 586 | 1.18e-74 | 245 |
MS.gene84365.t1 | MTR_2g105560 | 40.000 | 315 | 173 | 5 | 148 | 461 | 40 | 339 | 3.83e-74 | 236 |
MS.gene84365.t1 | MTR_7g107180 | 40.256 | 313 | 175 | 4 | 149 | 461 | 7 | 307 | 8.88e-72 | 229 |
MS.gene84365.t1 | MTR_7g110430 | 31.356 | 472 | 266 | 13 | 2 | 461 | 115 | 540 | 2.93e-63 | 214 |
MS.gene84365.t1 | MTR_7g111560 | 32.960 | 446 | 269 | 14 | 34 | 461 | 123 | 556 | 9.38e-60 | 205 |
MS.gene84365.t1 | MTR_2g039530 | 38.369 | 331 | 180 | 9 | 122 | 445 | 26 | 339 | 1.94e-56 | 191 |
MS.gene84365.t1 | MTR_0458s0010 | 33.262 | 466 | 230 | 15 | 36 | 461 | 94 | 518 | 1.82e-55 | 192 |
MS.gene84365.t1 | MTR_6g012800 | 33.987 | 306 | 176 | 7 | 149 | 444 | 6 | 295 | 1.96e-54 | 184 |
MS.gene84365.t1 | MTR_6g088810 | 35.632 | 348 | 189 | 12 | 121 | 450 | 47 | 377 | 4.04e-54 | 186 |
MS.gene84365.t1 | MTR_6g024165 | 37.117 | 326 | 174 | 11 | 137 | 451 | 30 | 335 | 4.02e-53 | 182 |
MS.gene84365.t1 | MTR_8g102380 | 35.629 | 334 | 179 | 12 | 131 | 450 | 66 | 377 | 1.10e-52 | 182 |
MS.gene84365.t1 | MTR_1g086540 | 36.909 | 317 | 173 | 8 | 146 | 452 | 47 | 346 | 1.27e-52 | 181 |
MS.gene84365.t1 | MTR_7g011530 | 33.684 | 285 | 162 | 6 | 151 | 423 | 8 | 277 | 3.17e-48 | 168 |
MS.gene84365.t1 | MTR_7g102600 | 30.814 | 344 | 209 | 8 | 114 | 450 | 72 | 393 | 1.65e-45 | 163 |
MS.gene84365.t1 | MTR_8g102380 | 35.943 | 281 | 148 | 9 | 131 | 397 | 66 | 328 | 2.74e-44 | 158 |
MS.gene84365.t1 | MTR_5g095490 | 34.416 | 308 | 173 | 9 | 155 | 450 | 67 | 357 | 5.12e-44 | 158 |
MS.gene84365.t1 | MTR_6g042660 | 34.286 | 280 | 159 | 8 | 149 | 423 | 37 | 296 | 4.52e-43 | 155 |
MS.gene84365.t1 | MTR_5g083590 | 31.429 | 315 | 163 | 5 | 148 | 461 | 6 | 268 | 1.72e-42 | 152 |
MS.gene84365.t1 | MTR_7g092780 | 33.121 | 314 | 186 | 7 | 149 | 452 | 90 | 389 | 2.62e-42 | 154 |
MS.gene84365.t1 | MTR_5g093970 | 32.673 | 303 | 189 | 5 | 149 | 451 | 43 | 330 | 6.80e-42 | 152 |
MS.gene84365.t1 | MTR_4g124740 | 31.707 | 328 | 189 | 10 | 132 | 450 | 38 | 339 | 4.00e-41 | 150 |
MS.gene84365.t1 | MTR_5g012600 | 30.380 | 316 | 193 | 8 | 149 | 453 | 63 | 362 | 2.61e-40 | 148 |
MS.gene84365.t1 | MTR_1g033050 | 33.333 | 282 | 164 | 7 | 150 | 423 | 19 | 284 | 3.28e-40 | 147 |
MS.gene84365.t1 | MTR_6g042690 | 33.099 | 284 | 162 | 8 | 149 | 423 | 39 | 303 | 1.42e-37 | 140 |
MS.gene84365.t1 | MTR_2g033970 | 30.124 | 322 | 196 | 8 | 138 | 450 | 45 | 346 | 1.04e-36 | 138 |
MS.gene84365.t1 | MTR_5g088300 | 33.091 | 275 | 165 | 6 | 149 | 423 | 37 | 292 | 5.82e-36 | 135 |
MS.gene84365.t1 | MTR_2g073390 | 30.000 | 340 | 199 | 10 | 130 | 450 | 42 | 361 | 3.90e-35 | 134 |
MS.gene84365.t1 | MTR_5g088280 | 31.900 | 279 | 171 | 6 | 145 | 423 | 35 | 294 | 1.91e-34 | 131 |
MS.gene84365.t1 | MTR_4g074290 | 29.167 | 336 | 207 | 9 | 130 | 450 | 42 | 361 | 2.76e-34 | 132 |
MS.gene84365.t1 | MTR_4g051810 | 31.169 | 308 | 189 | 7 | 145 | 451 | 33 | 318 | 5.68e-34 | 130 |
MS.gene84365.t1 | MTR_5g088290 | 31.636 | 275 | 170 | 5 | 149 | 423 | 48 | 304 | 1.05e-32 | 127 |
MS.gene84365.t1 | MTR_0009s0350 | 29.290 | 338 | 204 | 10 | 130 | 450 | 42 | 361 | 1.09e-31 | 125 |
MS.gene84365.t1 | MTR_0009s0340 | 29.290 | 338 | 204 | 10 | 130 | 450 | 42 | 361 | 1.09e-31 | 125 |
MS.gene84365.t1 | MTR_2g436600 | 28.483 | 323 | 191 | 10 | 138 | 450 | 44 | 336 | 9.05e-30 | 119 |
MS.gene84365.t1 | MTR_8g036225 | 30.345 | 290 | 174 | 8 | 143 | 423 | 28 | 298 | 1.17e-28 | 115 |
MS.gene84365.t1 | MTR_6g025590 | 38.323 | 167 | 94 | 5 | 151 | 309 | 51 | 216 | 9.16e-26 | 105 |
MS.gene84365.t1 | MTR_0408s0030 | 41.414 | 99 | 48 | 2 | 325 | 423 | 35 | 123 | 4.22e-18 | 81.6 |
MS.gene84365.t1 | MTR_4g130790 | 33.742 | 163 | 94 | 5 | 178 | 331 | 53 | 210 | 1.68e-17 | 82.8 |
MS.gene84365.t1 | MTR_6g024200 | 37.600 | 125 | 66 | 3 | 326 | 450 | 164 | 276 | 4.50e-16 | 79.0 |
MS.gene84365.t1 | MTR_2g436070 | 32.941 | 170 | 98 | 4 | 66 | 221 | 154 | 321 | 3.87e-14 | 74.3 |
MS.gene84365.t1 | MTR_7g102580 | 40.698 | 86 | 41 | 3 | 224 | 304 | 73 | 153 | 1.11e-11 | 63.2 |
MS.gene84365.t1 | MTR_7g102570 | 32.743 | 113 | 63 | 3 | 309 | 419 | 3 | 104 | 1.78e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84365.t1 | AT3G47400 | 57.294 | 473 | 189 | 6 | 1 | 461 | 123 | 594 | 0.0 | 548 |
MS.gene84365.t1 | AT5G51490 | 56.144 | 472 | 192 | 7 | 1 | 461 | 69 | 536 | 0.0 | 546 |
MS.gene84365.t1 | AT5G51500 | 56.383 | 470 | 194 | 8 | 1 | 461 | 73 | 540 | 0.0 | 541 |
MS.gene84365.t1 | AT2G45220 | 52.391 | 460 | 203 | 10 | 3 | 461 | 67 | 511 | 1.20e-159 | 461 |
MS.gene84365.t1 | AT4G00190 | 48.009 | 427 | 202 | 7 | 36 | 461 | 67 | 474 | 9.03e-134 | 394 |
MS.gene84365.t1 | AT1G11580 | 47.312 | 465 | 228 | 8 | 7 | 461 | 100 | 557 | 2.08e-133 | 396 |
MS.gene84365.t1 | AT1G11580 | 47.312 | 465 | 228 | 8 | 7 | 461 | 121 | 578 | 4.51e-133 | 396 |
MS.gene84365.t1 | AT1G23200 | 44.000 | 500 | 225 | 10 | 1 | 461 | 71 | 554 | 1.36e-132 | 394 |
MS.gene84365.t1 | AT3G60730 | 44.956 | 456 | 214 | 8 | 36 | 461 | 71 | 519 | 2.25e-131 | 390 |
MS.gene84365.t1 | AT5G53370 | 45.354 | 452 | 222 | 7 | 31 | 461 | 138 | 585 | 1.38e-129 | 387 |
MS.gene84365.t1 | AT5G53370 | 45.354 | 452 | 222 | 7 | 31 | 461 | 174 | 621 | 7.29e-129 | 387 |
MS.gene84365.t1 | AT4G02320 | 43.121 | 487 | 242 | 9 | 2 | 461 | 40 | 518 | 2.02e-127 | 380 |
MS.gene84365.t1 | AT3G49220 | 44.248 | 452 | 225 | 8 | 31 | 461 | 151 | 596 | 2.69e-126 | 379 |
MS.gene84365.t1 | AT3G14310 | 45.781 | 474 | 211 | 8 | 30 | 461 | 123 | 592 | 3.99e-126 | 379 |
MS.gene84365.t1 | AT4G02300 | 44.470 | 443 | 223 | 9 | 36 | 461 | 96 | 532 | 8.46e-126 | 376 |
MS.gene84365.t1 | AT3G49220 | 44.248 | 452 | 225 | 8 | 31 | 461 | 196 | 641 | 1.08e-125 | 379 |
MS.gene84365.t1 | AT3G43270 | 45.067 | 446 | 222 | 7 | 36 | 461 | 83 | 525 | 6.60e-125 | 374 |
MS.gene84365.t1 | AT3G59010 | 45.053 | 475 | 229 | 9 | 3 | 461 | 70 | 528 | 1.55e-124 | 372 |
MS.gene84365.t1 | AT1G53830 | 46.087 | 460 | 210 | 8 | 36 | 461 | 132 | 587 | 2.79e-124 | 374 |
MS.gene84365.t1 | AT4G33220 | 43.107 | 457 | 225 | 7 | 36 | 461 | 71 | 523 | 5.61e-121 | 363 |
MS.gene84365.t1 | AT2G43050 | 44.304 | 474 | 226 | 12 | 3 | 461 | 66 | 516 | 6.69e-121 | 363 |
MS.gene84365.t1 | AT4G33220 | 50.867 | 346 | 167 | 3 | 116 | 461 | 60 | 402 | 3.40e-120 | 357 |
MS.gene84365.t1 | AT5G04960 | 44.181 | 464 | 222 | 12 | 16 | 459 | 116 | 562 | 5.83e-120 | 362 |
MS.gene84365.t1 | AT5G20860 | 43.409 | 440 | 231 | 9 | 32 | 461 | 107 | 538 | 7.28e-120 | 361 |
MS.gene84365.t1 | AT3G05620 | 46.402 | 403 | 194 | 8 | 68 | 461 | 152 | 541 | 2.22e-117 | 355 |
MS.gene84365.t1 | AT4G02330 | 41.895 | 475 | 225 | 10 | 36 | 461 | 99 | 571 | 2.74e-117 | 355 |
MS.gene84365.t1 | AT1G02810 | 40.412 | 485 | 228 | 8 | 36 | 461 | 95 | 577 | 9.63e-116 | 352 |
MS.gene84365.t1 | AT2G47550 | 45.667 | 427 | 199 | 7 | 66 | 461 | 134 | 558 | 6.93e-115 | 349 |
MS.gene84365.t1 | AT5G49180 | 40.206 | 485 | 258 | 10 | 2 | 457 | 85 | 566 | 5.45e-114 | 347 |
MS.gene84365.t1 | AT2G26450 | 43.023 | 430 | 230 | 8 | 42 | 461 | 187 | 611 | 2.06e-113 | 347 |
MS.gene84365.t1 | AT2G26440 | 41.425 | 449 | 232 | 9 | 36 | 461 | 107 | 547 | 8.40e-113 | 343 |
MS.gene84365.t1 | AT3G10710 | 43.567 | 443 | 215 | 9 | 37 | 461 | 136 | 561 | 1.22e-112 | 343 |
MS.gene84365.t1 | AT5G27870 | 40.125 | 481 | 262 | 11 | 2 | 461 | 87 | 562 | 4.35e-111 | 344 |
MS.gene84365.t1 | AT3G05610 | 39.419 | 482 | 266 | 9 | 2 | 461 | 88 | 565 | 3.06e-110 | 340 |
MS.gene84365.t1 | AT4G33230 | 40.807 | 446 | 240 | 9 | 37 | 461 | 164 | 606 | 2.53e-109 | 336 |
MS.gene84365.t1 | AT3G27980 | 44.638 | 401 | 206 | 9 | 68 | 461 | 106 | 497 | 1.76e-108 | 330 |
MS.gene84365.t1 | AT1G11590 | 42.069 | 435 | 232 | 10 | 39 | 461 | 98 | 524 | 2.54e-107 | 328 |
MS.gene84365.t1 | AT3G06830 | 39.198 | 449 | 244 | 10 | 37 | 459 | 121 | 566 | 1.32e-106 | 328 |
MS.gene84365.t1 | AT3G10720 | 51.111 | 315 | 150 | 3 | 149 | 461 | 303 | 615 | 6.31e-106 | 328 |
MS.gene84365.t1 | AT4G03930 | 43.032 | 409 | 215 | 9 | 63 | 461 | 124 | 524 | 2.03e-105 | 323 |
MS.gene84365.t1 | AT5G04970 | 37.000 | 500 | 268 | 7 | 7 | 461 | 123 | 620 | 2.23e-101 | 316 |
MS.gene84365.t1 | AT3G10720 | 55.172 | 261 | 115 | 2 | 201 | 461 | 1 | 259 | 5.06e-100 | 300 |
MS.gene84365.t1 | AT1G53840 | 39.735 | 453 | 226 | 11 | 37 | 455 | 142 | 581 | 2.34e-99 | 310 |
MS.gene84365.t1 | AT5G20860 | 40.095 | 419 | 205 | 8 | 32 | 440 | 107 | 489 | 6.52e-98 | 303 |
MS.gene84365.t1 | AT4G15980 | 43.611 | 360 | 195 | 6 | 105 | 459 | 344 | 700 | 2.26e-96 | 305 |
MS.gene84365.t1 | AT4G15980 | 43.611 | 360 | 195 | 6 | 105 | 459 | 354 | 710 | 4.04e-96 | 305 |
MS.gene84365.t1 | AT3G14300 | 39.150 | 447 | 241 | 8 | 23 | 446 | 515 | 953 | 2.29e-94 | 306 |
MS.gene84365.t1 | AT5G09760 | 45.370 | 324 | 156 | 6 | 143 | 453 | 235 | 550 | 6.50e-85 | 271 |
MS.gene84365.t1 | AT5G09760 | 45.370 | 324 | 156 | 6 | 143 | 453 | 261 | 576 | 1.26e-84 | 271 |
MS.gene84365.t1 | AT5G64640 | 44.410 | 322 | 155 | 7 | 148 | 453 | 288 | 601 | 6.20e-83 | 267 |
MS.gene84365.t1 | AT1G11370 | 49.393 | 247 | 124 | 1 | 146 | 392 | 43 | 288 | 1.41e-82 | 256 |
MS.gene84365.t1 | AT2G47030 | 39.607 | 356 | 197 | 6 | 120 | 461 | 237 | 588 | 2.10e-74 | 244 |
MS.gene84365.t1 | AT2G47040 | 38.810 | 353 | 201 | 6 | 120 | 461 | 247 | 595 | 6.00e-73 | 241 |
MS.gene84365.t1 | AT3G62170 | 38.719 | 359 | 190 | 9 | 127 | 461 | 236 | 588 | 3.89e-70 | 233 |
MS.gene84365.t1 | AT2G21610 | 33.663 | 303 | 179 | 7 | 149 | 450 | 51 | 332 | 1.15e-50 | 176 |
MS.gene84365.t1 | AT2G36700 | 34.906 | 318 | 184 | 9 | 141 | 450 | 31 | 333 | 1.23e-50 | 175 |
MS.gene84365.t1 | AT5G19730 | 31.492 | 362 | 203 | 11 | 112 | 450 | 42 | 381 | 1.59e-50 | 176 |
MS.gene84365.t1 | AT2G21610 | 33.663 | 303 | 179 | 7 | 149 | 450 | 56 | 337 | 1.87e-50 | 175 |
MS.gene84365.t1 | AT2G36710 | 33.856 | 319 | 188 | 8 | 146 | 455 | 86 | 390 | 2.16e-50 | 176 |
MS.gene84365.t1 | AT3G29090 | 33.684 | 285 | 162 | 6 | 151 | 423 | 9 | 278 | 2.42e-48 | 169 |
MS.gene84365.t1 | AT1G05310 | 33.333 | 312 | 184 | 7 | 149 | 450 | 91 | 388 | 2.91e-44 | 160 |
MS.gene84365.t1 | AT3G17060 | 30.650 | 323 | 193 | 8 | 138 | 450 | 35 | 336 | 1.23e-41 | 151 |
MS.gene84365.t1 | AT5G47500 | 30.303 | 330 | 199 | 9 | 134 | 451 | 48 | 358 | 1.16e-40 | 149 |
MS.gene84365.t1 | AT5G07430 | 29.692 | 357 | 216 | 11 | 108 | 450 | 20 | 355 | 1.93e-39 | 146 |
MS.gene84365.t1 | AT5G55590 | 33.648 | 318 | 182 | 10 | 145 | 450 | 78 | 378 | 5.05e-39 | 145 |
MS.gene84365.t1 | AT5G55590 | 35.249 | 261 | 144 | 7 | 145 | 393 | 78 | 325 | 3.90e-38 | 142 |
MS.gene84365.t1 | AT1G44980 | 37.555 | 229 | 136 | 5 | 91 | 313 | 14 | 241 | 1.27e-37 | 138 |
MS.gene84365.t1 | AT5G07420 | 30.088 | 339 | 204 | 10 | 127 | 450 | 35 | 355 | 1.16e-36 | 138 |
MS.gene84365.t1 | AT3G24130 | 31.469 | 286 | 170 | 7 | 149 | 423 | 34 | 304 | 2.04e-36 | 137 |
MS.gene84365.t1 | AT5G18990 | 30.565 | 301 | 172 | 9 | 138 | 423 | 21 | 299 | 2.95e-33 | 128 |
MS.gene84365.t1 | AT5G07410 | 28.869 | 336 | 207 | 11 | 129 | 450 | 38 | 355 | 7.55e-32 | 125 |
MS.gene84365.t1 | AT5G61680 | 28.406 | 345 | 209 | 12 | 124 | 450 | 34 | 358 | 8.37e-32 | 125 |
MS.gene84365.t1 | AT5G26810 | 29.592 | 294 | 169 | 8 | 149 | 423 | 34 | 308 | 1.98e-31 | 124 |
MS.gene84365.t1 | AT1G69940 | 27.901 | 362 | 227 | 12 | 105 | 450 | 12 | 355 | 4.41e-31 | 123 |
MS.gene84365.t1 | AT2G19150 | 26.970 | 330 | 205 | 9 | 141 | 457 | 33 | 339 | 5.55e-30 | 119 |
MS.gene84365.t1 | AT2G19150 | 28.571 | 266 | 158 | 7 | 141 | 393 | 33 | 279 | 1.93e-27 | 111 |
MS.gene84365.t1 | AT2G47280 | 28.425 | 292 | 177 | 9 | 145 | 423 | 31 | 303 | 5.46e-27 | 111 |
MS.gene84365.t1 | AT3G49220 | 30.180 | 222 | 129 | 7 | 31 | 231 | 196 | 412 | 5.08e-25 | 107 |
Find 92 sgRNAs with CRISPR-Local
Find 121 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTCCACAATTGTCAAATT+AGG | 0.096980 | 3.1:-4187615 | MS.gene84365:CDS |
TTGCGAAAATGTTACAATTT+TGG | 0.118044 | 3.1:+4187713 | None:intergenic |
TCGTACCTTTGTTATGTTTC+AGG | 0.180730 | 3.1:+4188608 | None:intergenic |
TCATGCATAGAAAACCATTT+TGG | 0.206714 | 3.1:+4188450 | None:intergenic |
ACTTCTAGAGCTTGTTATTA+TGG | 0.221969 | 3.1:+4188203 | None:intergenic |
GCATGGTAAGAGCTTGGTTT+AGG | 0.232125 | 3.1:+4188935 | None:intergenic |
GCTCAAGACACATTGTATTA+TGG | 0.240578 | 3.1:-4187442 | MS.gene84365:CDS |
ACGGTTGCTGGACTCCTTGC+TGG | 0.264051 | 3.1:-4187322 | MS.gene84365:CDS |
ACCACAAGATTGTACTTTAC+TGG | 0.266090 | 3.1:+4188402 | None:intergenic |
ATTCCACAATTGTCAAATTA+GGG | 0.271376 | 3.1:-4187614 | MS.gene84365:CDS |
AAGAAGGGTCATTTCCAAAA+TGG | 0.284001 | 3.1:-4188464 | MS.gene84365:CDS |
TATCGACAATGCTTCATCTA+TGG | 0.297382 | 3.1:-4187775 | MS.gene84365:CDS |
GCATCAAAGTTTACGGTTGC+TGG | 0.302438 | 3.1:-4187334 | MS.gene84365:CDS |
AATCAAAGACCAGATGTAAA+TGG | 0.305586 | 3.1:+4187271 | None:intergenic |
GGAATGAAATTCCAGTGTTT+TGG | 0.313831 | 3.1:+4187632 | None:intergenic |
CATGGTAAGAGCTTGGTTTA+GGG | 0.317299 | 3.1:+4188936 | None:intergenic |
CATTTAAATTTAGGTATTGA+TGG | 0.320933 | 3.1:-4187958 | MS.gene84365:intron |
TGACAAGTACAAAACCTTCT+TGG | 0.322544 | 3.1:-4187566 | MS.gene84365:CDS |
TGTGTGGACCGGCGGTATTT+TGG | 0.332076 | 3.1:+4187905 | None:intergenic |
CATCTCAACCGCACACTTGA+AGG | 0.335481 | 3.1:-4188814 | MS.gene84365:CDS |
GGCACTGTAGACTTCATCTT+TGG | 0.336037 | 3.1:-4187754 | MS.gene84365:CDS |
AAAGGAAGCATCAAAGTTTA+CGG | 0.343984 | 3.1:-4187341 | MS.gene84365:CDS |
GTAAACTTTGATGCTTCCTT+TGG | 0.345344 | 3.1:+4187343 | None:intergenic |
CAACAGCAAATAGAGTAAAA+TGG | 0.362307 | 3.1:-4187390 | MS.gene84365:CDS |
GACAAGTACAAAACCTTCTT+GGG | 0.387883 | 3.1:-4187565 | MS.gene84365:CDS |
TTTCAGGAAATGCATATTGA+TGG | 0.392962 | 3.1:+4188624 | None:intergenic |
AGCCATGTTTGTGCATCATT+TGG | 0.409326 | 3.1:+4188763 | None:intergenic |
CCAATGTCACTGAGATGTTA+AGG | 0.412297 | 3.1:-4188657 | MS.gene84365:CDS |
GCAACAATATTCAAGAGTTA+TGG | 0.414279 | 3.1:-4187533 | MS.gene84365:CDS |
TATGGTGAATATGAAAACTA+TGG | 0.416977 | 3.1:-4187424 | MS.gene84365:CDS |
GAATGGGTCACCTCGACCTT+GGG | 0.417363 | 3.1:+4187654 | None:intergenic |
GGGTTATCAAGATACTTTGA+TGG | 0.428055 | 3.1:-4187818 | MS.gene84365:CDS |
TCAGTGCATAAAACGGTTCA+TGG | 0.448897 | 3.1:-4188871 | MS.gene84365:CDS |
ACTACTGTTCCATTTACATC+TGG | 0.451298 | 3.1:-4187280 | MS.gene84365:CDS |
AAACCTTCTTGGGAAGGCCT+TGG | 0.458014 | 3.1:-4187555 | MS.gene84365:CDS |
GGAATGGGTCACCTCGACCT+TGG | 0.461387 | 3.1:+4187653 | None:intergenic |
ACAAGCTCTAGAAGTGTTCA+AGG | 0.461415 | 3.1:-4188195 | MS.gene84365:CDS |
GTGGTAGCAAAAGATGGTTC+TGG | 0.463626 | 3.1:-4188384 | MS.gene84365:CDS |
CAGCCCTAATTTGACAATTG+TGG | 0.474354 | 3.1:+4187611 | None:intergenic |
AGCTTGACCCTTGTGTGGAC+CGG | 0.480213 | 3.1:+4187894 | None:intergenic |
ATTGTACTTTACTGGAGACT+TGG | 0.493638 | 3.1:+4188410 | None:intergenic |
AATATTGAAACATGTAAAAG+TGG | 0.495425 | 3.1:-4188724 | MS.gene84365:CDS |
TTTGTGATACATGTTAAGAA+AGG | 0.500212 | 3.1:-4188300 | MS.gene84365:CDS |
CTATTTGCTGTTGATGAACC+AGG | 0.508404 | 3.1:+4187400 | None:intergenic |
TTGCCAAGGCCTTCCCAAGA+AGG | 0.511374 | 3.1:+4187552 | None:intergenic |
CAGAGAGATCGGAGGCTGAT+CGG | 0.519200 | 3.1:+4187863 | None:intergenic |
CCTTAACATCTCAGTGACAT+TGG | 0.524868 | 3.1:+4188657 | None:intergenic |
AATCTTGTGGTAGCAAAAGA+TGG | 0.533550 | 3.1:-4188390 | MS.gene84365:CDS |
ACTCTTGAATATTGTTGCCA+AGG | 0.536658 | 3.1:+4187538 | None:intergenic |
ACCCCATGGAGACCAACCTA+GGG | 0.538985 | 3.1:+4187477 | None:intergenic |
ATGATCACTGCCCAAGGTCG+AGG | 0.540491 | 3.1:-4187664 | MS.gene84365:CDS |
TCACTTACAGAAACAAAAGA+AGG | 0.542875 | 3.1:-4188480 | MS.gene84365:intron |
AACATTATGCTGGTTGGTGA+TGG | 0.543858 | 3.1:-4188237 | MS.gene84365:CDS |
GCAAATAGAGTAAAATGGCC+TGG | 0.544601 | 3.1:-4187385 | MS.gene84365:CDS |
TTCGCAAGAAAGCCTTTGGA+TGG | 0.545241 | 3.1:-4187697 | MS.gene84365:CDS |
AAATACCGCCGGTCCACACA+AGG | 0.553589 | 3.1:-4187902 | MS.gene84365:CDS |
AAATTCATCAGTGCATAAAA+CGG | 0.555036 | 3.1:-4188878 | MS.gene84365:CDS |
CACCAAATGATGCACAAACA+TGG | 0.565228 | 3.1:-4188765 | MS.gene84365:CDS |
CATCTTTGGCAACGCCGCAG+TGG | 0.565370 | 3.1:-4187740 | MS.gene84365:CDS |
ATGTTTGCTTGACCATCCAA+AGG | 0.578798 | 3.1:+4187685 | None:intergenic |
CCGGTAAAAGACAGAGAGAT+CGG | 0.579063 | 3.1:+4187852 | None:intergenic |
TCATAATGATAACATTATGC+TGG | 0.579993 | 3.1:-4188247 | MS.gene84365:CDS |
AATGATAACATTATGCTGGT+TGG | 0.589997 | 3.1:-4188243 | MS.gene84365:CDS |
CTAAGAGAAAATACAAGACA+AGG | 0.594762 | 3.1:-4188323 | MS.gene84365:CDS |
TCCACACAAGGGTCAAGCTG+TGG | 0.596715 | 3.1:-4187890 | MS.gene84365:CDS |
TTGACCCTTGTGTGGACCGG+CGG | 0.598013 | 3.1:+4187897 | None:intergenic |
GCCACAGCTTGACCCTTGTG+TGG | 0.600879 | 3.1:+4187889 | None:intergenic |
CACCCCATGGAGACCAACCT+AGG | 0.600934 | 3.1:+4187476 | None:intergenic |
TCCAGTAAAGTACAATCTTG+TGG | 0.606248 | 3.1:-4188403 | MS.gene84365:CDS |
GGTGACCCATTCCAAAACAC+TGG | 0.611378 | 3.1:-4187643 | MS.gene84365:CDS |
TGTTTATAGAGAGAACATTG+AGG | 0.615615 | 3.1:-4188277 | MS.gene84365:CDS |
TGTTTAAGCCTTCAAGTGTG+CGG | 0.618251 | 3.1:+4188806 | None:intergenic |
ACTTATAGCTCTGCAACAGT+AGG | 0.618836 | 3.1:-4188162 | MS.gene84365:intron |
GCAAAATCAGTGTCACCCCA+TGG | 0.619580 | 3.1:+4187463 | None:intergenic |
TCATGTGATTACAAATCCAA+AGG | 0.625043 | 3.1:-4187359 | MS.gene84365:CDS |
GACTCCTTGCTGGACCAACA+TGG | 0.625478 | 3.1:-4187312 | MS.gene84365:CDS |
TTTGTAATCACATGATAACC+AGG | 0.630305 | 3.1:+4187367 | None:intergenic |
GCAAACATGATCACTGCCCA+AGG | 0.632823 | 3.1:-4187670 | MS.gene84365:CDS |
GTAGTTGTTGCTAACCATGT+TGG | 0.638393 | 3.1:+4187298 | None:intergenic |
AGTACAAAACCTTCTTGGGA+AGG | 0.639051 | 3.1:-4187561 | MS.gene84365:CDS |
CCCCTAGGTTGGTCTCCATG+GGG | 0.648245 | 3.1:-4187478 | MS.gene84365:CDS |
CACTTACAGAAACAAAAGAA+GGG | 0.648620 | 3.1:-4188479 | MS.gene84365:intron |
ATAACCTTCCAAAATACCGC+CGG | 0.662300 | 3.1:-4187913 | MS.gene84365:CDS |
CTAACCATGTTGGTCCAGCA+AGG | 0.666432 | 3.1:+4187308 | None:intergenic |
GAATATGAAAACTATGGACC+TGG | 0.667216 | 3.1:-4187418 | MS.gene84365:CDS |
AATACCGCCGGTCCACACAA+GGG | 0.672018 | 3.1:-4187901 | MS.gene84365:CDS |
CCCCATGGAGACCAACCTAG+GGG | 0.685055 | 3.1:+4187478 | None:intergenic |
CATTTCCTGAAACATAACAA+AGG | 0.694892 | 3.1:-4188613 | MS.gene84365:intron |
CCCATGGAGACCAACCTAGG+GGG | 0.713906 | 3.1:+4187479 | None:intergenic |
AGCTCTAGAAGTGTTCAAGG+AGG | 0.721005 | 3.1:-4188192 | MS.gene84365:CDS |
GTAAAAGACAGAGAGATCGG+AGG | 0.749268 | 3.1:+4187855 | None:intergenic |
GATAACCCGATATAGCACAC+CGG | 0.780618 | 3.1:+4187833 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAATATTTAAATTATCCTT+GGG | - | chr3.1:4188193-4188212 | MS.gene84365:CDS | 10.0% |
!! | TAAAAAAAAATAATTACTCT+TGG | - | chr3.1:4188242-4188261 | MS.gene84365:CDS | 10.0% |
!! | TATAATATTTAAATTATCCT+TGG | - | chr3.1:4188192-4188211 | MS.gene84365:CDS | 10.0% |
!!! | CTAAAATTTTATAATAAGAT+AGG | - | chr3.1:4188167-4188186 | MS.gene84365:CDS | 10.0% |
!! | TAATATTTAAATTATCCTTG+GGG | - | chr3.1:4188194-4188213 | MS.gene84365:CDS | 15.0% |
!! | AATATTGAAACATGTAAAAG+TGG | - | chr3.1:4187501-4187520 | MS.gene84365:CDS | 20.0% |
!! | ACAAGAAAATAAATAGAGAA+AGG | + | chr3.1:4188106-4188125 | None:intergenic | 20.0% |
!!! | AATTTTAGAACTTCAATAGT+TGG | + | chr3.1:4188155-4188174 | None:intergenic | 20.0% |
!!! | CATTTAAATTTAGGTATTGA+TGG | - | chr3.1:4188267-4188286 | MS.gene84365:CDS | 20.0% |
! | AAATAAATAGAGAAAGGAGA+TGG | + | chr3.1:4188100-4188119 | None:intergenic | 25.0% |
! | AAATTCATCAGTGCATAAAA+CGG | - | chr3.1:4187347-4187366 | MS.gene84365:CDS | 25.0% |
! | ATTCCACAATTGTCAAATTA+GGG | - | chr3.1:4188611-4188630 | MS.gene84365:intron | 25.0% |
! | CTAATCTTAATCGAAATTTC+TGG | - | chr3.1:4187717-4187736 | MS.gene84365:CDS | 25.0% |
! | CTCTTGGATCATTTAAATTT+AGG | - | chr3.1:4188258-4188277 | MS.gene84365:CDS | 25.0% |
! | TATGGTGAATATGAAAACTA+TGG | - | chr3.1:4188801-4188820 | MS.gene84365:CDS | 25.0% |
! | TCATAATGATAACATTATGC+TGG | - | chr3.1:4187978-4187997 | MS.gene84365:intron | 25.0% |
! | TTTGTGATACATGTTAAGAA+AGG | - | chr3.1:4187925-4187944 | MS.gene84365:CDS | 25.0% |
!! | TTGCGAAAATGTTACAATTT+TGG | + | chr3.1:4188515-4188534 | None:intergenic | 25.0% |
!!! | TATGGTGATGAAAACTTTTA+TGG | - | chr3.1:4188710-4188729 | MS.gene84365:CDS | 25.0% |
AATGATAACATTATGCTGGT+TGG | - | chr3.1:4187982-4188001 | MS.gene84365:intron | 30.0% | |
CAACAGCAAATAGAGTAAAA+TGG | - | chr3.1:4188835-4188854 | MS.gene84365:CDS | 30.0% | |
CACTTACAGAAACAAAAGAA+GGG | - | chr3.1:4187746-4187765 | MS.gene84365:CDS | 30.0% | |
CATTCCACAATTGTCAAATT+AGG | - | chr3.1:4188610-4188629 | MS.gene84365:intron | 30.0% | |
CATTTCCTGAAACATAACAA+AGG | - | chr3.1:4187612-4187631 | MS.gene84365:CDS | 30.0% | |
CTAAGAGAAAATACAAGACA+AGG | - | chr3.1:4187902-4187921 | MS.gene84365:CDS | 30.0% | |
GCAACAATATTCAAGAGTTA+TGG | - | chr3.1:4188692-4188711 | MS.gene84365:CDS | 30.0% | |
TCACTTACAGAAACAAAAGA+AGG | - | chr3.1:4187745-4187764 | MS.gene84365:CDS | 30.0% | |
TCATGTGATTACAAATCCAA+AGG | - | chr3.1:4188866-4188885 | MS.gene84365:CDS | 30.0% | |
TGTTTATAGAGAGAACATTG+AGG | - | chr3.1:4187948-4187967 | MS.gene84365:CDS | 30.0% | |
TTTCAGGAAATGCATATTGA+TGG | + | chr3.1:4187604-4187623 | None:intergenic | 30.0% | |
TTTGTAATCACATGATAACC+AGG | + | chr3.1:4188861-4188880 | None:intergenic | 30.0% | |
! | AATGGTTTTCTATGCATGAA+AGG | - | chr3.1:4187779-4187798 | MS.gene84365:CDS | 30.0% |
! | TCATGCATAGAAAACCATTT+TGG | + | chr3.1:4187778-4187797 | None:intergenic | 30.0% |
!! | AAAGGAAGCATCAAAGTTTA+CGG | - | chr3.1:4188884-4188903 | MS.gene84365:CDS | 30.0% |
!! | ACTTCTAGAGCTTGTTATTA+TGG | + | chr3.1:4188025-4188044 | None:intergenic | 30.0% |
!!! | AAATTCCAGTGTTTTGGAAT+GGG | + | chr3.1:4188590-4188609 | None:intergenic | 30.0% |
!!! | TCTTTTGTTTCTGTAAGTGA+CGG | + | chr3.1:4187745-4187764 | None:intergenic | 30.0% |
AAGAAGGGTCATTTCCAAAA+TGG | - | chr3.1:4187761-4187780 | MS.gene84365:CDS | 35.0% | |
AATCTTGTGGTAGCAAAAGA+TGG | - | chr3.1:4187835-4187854 | MS.gene84365:CDS | 35.0% | |
ACCACAAGATTGTACTTTAC+TGG | + | chr3.1:4187826-4187845 | None:intergenic | 35.0% | |
ACTACTGTTCCATTTACATC+TGG | - | chr3.1:4188945-4188964 | MS.gene84365:CDS | 35.0% | |
ACTCTTGAATATTGTTGCCA+AGG | + | chr3.1:4188690-4188709 | None:intergenic | 35.0% | |
ATTGTACTTTACTGGAGACT+TGG | + | chr3.1:4187818-4187837 | None:intergenic | 35.0% | |
GAATATGAAAACTATGGACC+TGG | - | chr3.1:4188807-4188826 | MS.gene84365:CDS | 35.0% | |
GACAAGTACAAAACCTTCTT+GGG | - | chr3.1:4188660-4188679 | MS.gene84365:CDS | 35.0% | |
GCTCAAGACACATTGTATTA+TGG | - | chr3.1:4188783-4188802 | MS.gene84365:CDS | 35.0% | |
GGGTTATCAAGATACTTTGA+TGG | - | chr3.1:4188407-4188426 | MS.gene84365:CDS | 35.0% | |
GTAAACTTTGATGCTTCCTT+TGG | + | chr3.1:4188885-4188904 | None:intergenic | 35.0% | |
TATCGACAATGCTTCATCTA+TGG | - | chr3.1:4188450-4188469 | MS.gene84365:CDS | 35.0% | |
TCCAGTAAAGTACAATCTTG+TGG | - | chr3.1:4187822-4187841 | MS.gene84365:CDS | 35.0% | |
TGACAAGTACAAAACCTTCT+TGG | - | chr3.1:4188659-4188678 | MS.gene84365:CDS | 35.0% | |
TTGAAAGTAAAAAAGCCCCA+AGG | + | chr3.1:4188212-4188231 | None:intergenic | 35.0% | |
! | GGAATGAAATTCCAGTGTTT+TGG | + | chr3.1:4188596-4188615 | None:intergenic | 35.0% |
! | GTTTTGTACTTGTCAACAAC+AGG | + | chr3.1:4188654-4188673 | None:intergenic | 35.0% |
! | TCGTACCTTTGTTATGTTTC+AGG | + | chr3.1:4187620-4187639 | None:intergenic | 35.0% |
!!! | GAAATTCCAGTGTTTTGGAA+TGG | + | chr3.1:4188591-4188610 | None:intergenic | 35.0% |
AGCCATGTTTGTGCATCATT+TGG | + | chr3.1:4187465-4187484 | None:intergenic | 40.0% | |
AGTACAAAACCTTCTTGGGA+AGG | - | chr3.1:4188664-4188683 | MS.gene84365:CDS | 40.0% | |
ATAACCTTCCAAAATACCGC+CGG | - | chr3.1:4188312-4188331 | MS.gene84365:CDS | 40.0% | |
ATGTTTGCTTGACCATCCAA+AGG | + | chr3.1:4188543-4188562 | None:intergenic | 40.0% | |
CACCAAATGATGCACAAACA+TGG | - | chr3.1:4187460-4187479 | MS.gene84365:CDS | 40.0% | |
CAGCCCTAATTTGACAATTG+TGG | + | chr3.1:4188617-4188636 | None:intergenic | 40.0% | |
CATGGTAAGAGCTTGGTTTA+GGG | + | chr3.1:4187292-4187311 | None:intergenic | 40.0% | |
CCAATGTCACTGAGATGTTA+AGG | - | chr3.1:4187568-4187587 | MS.gene84365:CDS | 40.0% | |
CCTTAACATCTCAGTGACAT+TGG | + | chr3.1:4187571-4187590 | None:intergenic | 40.0% | |
GCAAATAGAGTAAAATGGCC+TGG | - | chr3.1:4188840-4188859 | MS.gene84365:CDS | 40.0% | |
GTAGTTGTTGCTAACCATGT+TGG | + | chr3.1:4188930-4188949 | None:intergenic | 40.0% | |
TCAGTGCATAAAACGGTTCA+TGG | - | chr3.1:4187354-4187373 | MS.gene84365:CDS | 40.0% | |
TGTTTAAGCCTTCAAGTGTG+CGG | + | chr3.1:4187422-4187441 | None:intergenic | 40.0% | |
! | ACTTATAGCTCTGCAACAGT+AGG | - | chr3.1:4188063-4188082 | MS.gene84365:intron | 40.0% |
! | CATTTTCGCAAGAAAGCCTT+TGG | - | chr3.1:4188524-4188543 | MS.gene84365:intron | 40.0% |
! | CTTTTACCGGTGTGCTATAT+CGG | - | chr3.1:4188386-4188405 | MS.gene84365:CDS | 40.0% |
! | CTTTTTGCATGGTAAGAGCT+TGG | + | chr3.1:4187299-4187318 | None:intergenic | 40.0% |
! | TTCTTGTGCGTCTTTTTGCA+TGG | + | chr3.1:4187310-4187329 | None:intergenic | 40.0% |
! | TTTTACCGGTGTGCTATATC+GGG | - | chr3.1:4188387-4188406 | MS.gene84365:CDS | 40.0% |
!! | AACATTATGCTGGTTGGTGA+TGG | - | chr3.1:4187988-4188007 | MS.gene84365:intron | 40.0% |
!! | ACAAGCTCTAGAAGTGTTCA+AGG | - | chr3.1:4188030-4188049 | MS.gene84365:intron | 40.0% |
!! | CTATTTGCTGTTGATGAACC+AGG | + | chr3.1:4188828-4188847 | None:intergenic | 40.0% |
!!! | ACAATTTTGGAACACCACTG+CGG | + | chr3.1:4188502-4188521 | None:intergenic | 40.0% |
CCGGTAAAAGACAGAGAGAT+CGG | + | chr3.1:4188376-4188395 | None:intergenic | 45.0% | |
GATAACCCGATATAGCACAC+CGG | + | chr3.1:4188395-4188414 | None:intergenic | 45.0% | |
GCATCAAAGTTTACGGTTGC+TGG | - | chr3.1:4188891-4188910 | MS.gene84365:CDS | 45.0% | |
GCATGGTAAGAGCTTGGTTT+AGG | + | chr3.1:4187293-4187312 | None:intergenic | 45.0% | |
GGCACTGTAGACTTCATCTT+TGG | - | chr3.1:4188471-4188490 | MS.gene84365:CDS | 45.0% | |
GTAAAAGACAGAGAGATCGG+AGG | + | chr3.1:4188373-4188392 | None:intergenic | 45.0% | |
GTGGTAGCAAAAGATGGTTC+TGG | - | chr3.1:4187841-4187860 | MS.gene84365:CDS | 45.0% | |
TTCGCAAGAAAGCCTTTGGA+TGG | - | chr3.1:4188528-4188547 | MS.gene84365:intron | 45.0% | |
! | CCGATCTCTCTGTCTTTTAC+CGG | - | chr3.1:4188373-4188392 | MS.gene84365:CDS | 45.0% |
!! | AGCTCTAGAAGTGTTCAAGG+AGG | - | chr3.1:4188033-4188052 | MS.gene84365:intron | 45.0% |
!!! | TAAAATTTTATAATAAGATA+GGG | - | chr3.1:4188168-4188187 | MS.gene84365:CDS | 5.0% |
AAACCTTCTTGGGAAGGCCT+TGG | - | chr3.1:4188670-4188689 | MS.gene84365:CDS | 50.0% | |
CATCTCAACCGCACACTTGA+AGG | - | chr3.1:4187411-4187430 | MS.gene84365:CDS | 50.0% | |
CTAACCATGTTGGTCCAGCA+AGG | + | chr3.1:4188920-4188939 | None:intergenic | 50.0% | |
GCAAAATCAGTGTCACCCCA+TGG | + | chr3.1:4188765-4188784 | None:intergenic | 50.0% | |
GCAAACATGATCACTGCCCA+AGG | - | chr3.1:4188555-4188574 | MS.gene84365:intron | 50.0% | |
GGTGACCCATTCCAAAACAC+TGG | - | chr3.1:4188582-4188601 | MS.gene84365:intron | 50.0% | |
AAATACCGCCGGTCCACACA+AGG | - | chr3.1:4188323-4188342 | MS.gene84365:CDS | 55.0% | |
AATACCGCCGGTCCACACAA+GGG | - | chr3.1:4188324-4188343 | MS.gene84365:CDS | 55.0% | |
ACCCCATGGAGACCAACCTA+GGG | + | chr3.1:4188751-4188770 | None:intergenic | 55.0% | |
AGCTTGACCCTTGTGTGGAC+CGG | + | chr3.1:4188334-4188353 | None:intergenic | 55.0% | |
ATGATCACTGCCCAAGGTCG+AGG | - | chr3.1:4188561-4188580 | MS.gene84365:intron | 55.0% | |
CAGAGAGATCGGAGGCTGAT+CGG | + | chr3.1:4188365-4188384 | None:intergenic | 55.0% | |
CTTTAGTGAGCCCCCTAGGT+TGG | - | chr3.1:4188736-4188755 | MS.gene84365:CDS | 55.0% | |
GAATGGGTCACCTCGACCTT+GGG | + | chr3.1:4188574-4188593 | None:intergenic | 55.0% | |
GACACTTTAGTGAGCCCCCT+AGG | - | chr3.1:4188732-4188751 | MS.gene84365:CDS | 55.0% | |
GACTCCTTGCTGGACCAACA+TGG | - | chr3.1:4188913-4188932 | MS.gene84365:CDS | 55.0% | |
TCCACACAAGGGTCAAGCTG+TGG | - | chr3.1:4188335-4188354 | MS.gene84365:CDS | 55.0% | |
TTGCCAAGGCCTTCCCAAGA+AGG | + | chr3.1:4188676-4188695 | None:intergenic | 55.0% | |
! | TGTGTGGACCGGCGGTATTT+TGG | + | chr3.1:4188323-4188342 | None:intergenic | 55.0% |
!! | TGGACCGGCGGTATTTTGGA+AGG | + | chr3.1:4188319-4188338 | None:intergenic | 55.0% |
ACGGTTGCTGGACTCCTTGC+TGG | - | chr3.1:4188903-4188922 | MS.gene84365:CDS | 60.0% | |
CACCCCATGGAGACCAACCT+AGG | + | chr3.1:4188752-4188771 | None:intergenic | 60.0% | |
CATCTTTGGCAACGCCGCAG+TGG | - | chr3.1:4188485-4188504 | MS.gene84365:intron | 60.0% | |
CCCATGGAGACCAACCTAGG+GGG | + | chr3.1:4188749-4188768 | None:intergenic | 60.0% | |
CCCCATGGAGACCAACCTAG+GGG | + | chr3.1:4188750-4188769 | None:intergenic | 60.0% | |
GCCACAGCTTGACCCTTGTG+TGG | + | chr3.1:4188339-4188358 | None:intergenic | 60.0% | |
GGAATGGGTCACCTCGACCT+TGG | + | chr3.1:4188575-4188594 | None:intergenic | 60.0% | |
TTGACCCTTGTGTGGACCGG+CGG | + | chr3.1:4188331-4188350 | None:intergenic | 60.0% | |
!! | CCCCCTAGGTTGGTCTCCAT+GGG | - | chr3.1:4188746-4188765 | MS.gene84365:CDS | 60.0% |
!! | CCCCTAGGTTGGTCTCCATG+GGG | - | chr3.1:4188747-4188766 | MS.gene84365:CDS | 60.0% |
!! | GCCCCCTAGGTTGGTCTCCA+TGG | - | chr3.1:4188745-4188764 | MS.gene84365:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 4187273 | 4188974 | 4187273 | ID=MS.gene84365 |
chr3.1 | mRNA | 4187273 | 4188974 | 4187273 | ID=MS.gene84365.t1;Parent=MS.gene84365 |
chr3.1 | exon | 4188614 | 4188974 | 4188614 | ID=MS.gene84365.t1.exon1;Parent=MS.gene84365.t1 |
chr3.1 | CDS | 4188614 | 4188974 | 4188614 | ID=cds.MS.gene84365.t1;Parent=MS.gene84365.t1 |
chr3.1 | exon | 4188163 | 4188492 | 4188163 | ID=MS.gene84365.t1.exon2;Parent=MS.gene84365.t1 |
chr3.1 | CDS | 4188163 | 4188492 | 4188163 | ID=cds.MS.gene84365.t1;Parent=MS.gene84365.t1 |
chr3.1 | exon | 4187273 | 4187967 | 4187273 | ID=MS.gene84365.t1.exon3;Parent=MS.gene84365.t1 |
chr3.1 | CDS | 4187273 | 4187967 | 4187273 | ID=cds.MS.gene84365.t1;Parent=MS.gene84365.t1 |
Gene Sequence |
Protein sequence |