Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85021.t1 | RHN59829.1 | 99.7 | 397 | 1 | 0 | 1 | 397 | 1 | 397 | 2.50E-216 | 761.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85021.t1 | Q8L5U0 | 84.1 | 397 | 63 | 0 | 1 | 397 | 1 | 397 | 7.4e-185 | 647.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85021.t1 | A0A396I2I5 | 99.7 | 397 | 1 | 0 | 1 | 397 | 1 | 397 | 1.8e-216 | 761.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene39043 | MS.gene85021 | PPI |
MS.gene42526 | MS.gene85021 | PPI |
MS.gene014112 | MS.gene85021 | PPI |
MS.gene018309 | MS.gene85021 | PPI |
MS.gene37293 | MS.gene85021 | PPI |
MS.gene017884 | MS.gene85021 | PPI |
MS.gene85021 | MS.gene86150 | PPI |
MS.gene018310 | MS.gene85021 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85021.t1 | MTR_0173s0030 | 99.496 | 397 | 2 | 0 | 1 | 397 | 1 | 397 | 0.0 | 805 |
MS.gene85021.t1 | MTR_2g034320 | 46.591 | 88 | 28 | 4 | 97 | 183 | 20 | 89 | 2.57e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85021.t1 | AT5G42970 | 84.131 | 397 | 63 | 0 | 1 | 397 | 1 | 397 | 0.0 | 687 |
Find 70 sgRNAs with CRISPR-Local
Find 412 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTTATATATCAGGTGTATT+TGG | 0.162807 | 4.2:-68169220 | MS.gene85021:intron |
TCTGCAAAAGCATCAATTTC+AGG | 0.220902 | 4.2:+68169180 | None:intergenic |
TTTGGTTATTAGAGAGAAAT+TGG | 0.222768 | 4.2:-68172416 | MS.gene85021:CDS |
ACTGTTCTATCTTCTGTCTT+TGG | 0.232195 | 4.2:+68174504 | None:intergenic |
CAAATTGAGAAAAGGCAAAT+AGG | 0.242371 | 4.2:-68171644 | MS.gene85021:CDS |
CATTAATAAAGCATCATTCT+TGG | 0.283000 | 4.2:-68171875 | MS.gene85021:CDS |
TCAAGCTCTAAATGATGTTT+TGG | 0.311421 | 4.2:-68167721 | MS.gene85021:CDS |
TGCCGTTACGTGCACAATAT+TGG | 0.351744 | 4.2:-68169494 | MS.gene85021:CDS |
GAGAGAAACCTTCTGCAGTA+TGG | 0.365955 | 4.2:+68169309 | None:intergenic |
AGTTGTGTCGTTTGAAGAAC+AGG | 0.368584 | 4.2:-68173771 | MS.gene85021:intron |
AGATCTGAAGAGGAAGTTCT+TGG | 0.369986 | 4.2:-68171696 | MS.gene85021:CDS |
AAATTGAGAAAAGGCAAATA+GGG | 0.370512 | 4.2:-68171643 | MS.gene85021:CDS |
TCCAGACAATTTCACTGTGC+TGG | 0.378815 | 4.2:-68169051 | MS.gene85021:CDS |
GCAAACTTTATACAAATATC+AGG | 0.384105 | 4.2:-68168992 | MS.gene85021:intron |
TCTTGTAGCTTTGATGAGTT+AGG | 0.384222 | 4.2:-68168873 | MS.gene85021:intron |
GGCAATAATCCAAGTCAAAC+AGG | 0.393367 | 4.2:+68167669 | None:intergenic |
GCAATCTCTTTCTGTGTCTC+AGG | 0.418879 | 4.2:+68173824 | None:intergenic |
TGCACAATATTGGCAGGTGC+AGG | 0.426537 | 4.2:-68169484 | MS.gene85021:CDS |
GGGTAATTGATGATACATTC+AGG | 0.436412 | 4.2:-68172205 | MS.gene85021:CDS |
TGCTGAAGAGTTGGGAAGGT+TGG | 0.443905 | 4.2:-68173849 | MS.gene85021:CDS |
TCCAGCACAGTGAAATTGTC+TGG | 0.443989 | 4.2:+68169050 | None:intergenic |
AATCCAAGTCAAACAGGAAC+AGG | 0.449263 | 4.2:+68167675 | None:intergenic |
AGCTGACGCGACACTACTAA+TGG | 0.449872 | 4.2:+68173884 | None:intergenic |
AGCATCAAGAATGATTTATG+AGG | 0.485288 | 4.2:-68168442 | MS.gene85021:CDS |
CAGTGAAATTGTCTGGAAGA+AGG | 0.485991 | 4.2:+68169057 | None:intergenic |
AGTATTGAATTTGAAGTACA+AGG | 0.490159 | 4.2:-68171833 | MS.gene85021:intron |
AGTGGTATTGACCTAGATTC+AGG | 0.492697 | 4.2:-68172343 | MS.gene85021:CDS |
GATGAGTTAGGCACACTGTT+GGG | 0.493284 | 4.2:-68168861 | MS.gene85021:CDS |
GATTTATGAGGATAGGATGA+AGG | 0.501314 | 4.2:-68168430 | MS.gene85021:CDS |
GAAATTAATGAGGAAGCGCT+TGG | 0.507602 | 4.2:-68169532 | MS.gene85021:CDS |
ACACTGAAGAGTTGCAAAGA+TGG | 0.510433 | 4.2:-68168256 | MS.gene85021:CDS |
ACATATCTCAAATTGAGAAA+AGG | 0.510694 | 4.2:-68171652 | MS.gene85021:CDS |
GATGAAGGGATCTATTGATC+AGG | 0.510987 | 4.2:-68168415 | MS.gene85021:intron |
AGAAGAATTGAAACCACATC+AGG | 0.513961 | 4.2:-68169160 | MS.gene85021:intron |
TGTTCTTGCCACACTGTACA+AGG | 0.519005 | 4.2:-68169446 | MS.gene85021:intron |
GAGACCTCATTCCTGAATCT+AGG | 0.525371 | 4.2:+68172332 | None:intergenic |
AGTGAAATTGTCTGGAAGAA+GGG | 0.526038 | 4.2:+68169058 | None:intergenic |
AGAGAAACCTTCTGCAGTAT+GGG | 0.529187 | 4.2:+68169310 | None:intergenic |
TTGGATAGCATGGGCAAGAA+GGG | 0.533962 | 4.2:-68167702 | MS.gene85021:CDS |
CAAACTTTAATAACCTGATG+TGG | 0.534249 | 4.2:+68169147 | None:intergenic |
AAATTAATGAGGAAGCGCTT+GGG | 0.534615 | 4.2:-68169531 | MS.gene85021:CDS |
CACTGAAGAGTTGCAAAGAT+GGG | 0.536188 | 4.2:-68168255 | MS.gene85021:CDS |
AATTGCTTGTTTATACCTTG+AGG | 0.536370 | 4.2:-68172165 | MS.gene85021:intron |
TCAAATTCAATACTTCATGC+TGG | 0.537152 | 4.2:+68171842 | None:intergenic |
GTTGCAAAGATGGGACCAGC+AGG | 0.537433 | 4.2:-68168246 | MS.gene85021:intron |
AAATTATGTACCTTGGGAGG+TGG | 0.539100 | 4.2:+68168834 | None:intergenic |
TTTGGATAGCATGGGCAAGA+AGG | 0.544420 | 4.2:-68167703 | MS.gene85021:CDS |
TGATGAGTTAGGCACACTGT+TGG | 0.554252 | 4.2:-68168862 | MS.gene85021:CDS |
GTTACGTGCACAATATTGGC+AGG | 0.556349 | 4.2:-68169490 | MS.gene85021:CDS |
CAAATGACATTCTTCAAGCT+AGG | 0.557041 | 4.2:-68174451 | MS.gene85021:CDS |
GGCTGAGCTTTATGAATCTG+AGG | 0.561921 | 4.2:-68172395 | MS.gene85021:CDS |
CAAGAATGATTTATGAGGAT+AGG | 0.564825 | 4.2:-68168437 | MS.gene85021:CDS |
GATCTATCCCATACTGCAGA+AGG | 0.565134 | 4.2:-68169317 | MS.gene85021:intron |
ATATTACAGGGAAATTAATG+AGG | 0.565776 | 4.2:-68169542 | MS.gene85021:intron |
ATTTATGAGGATAGGATGAA+GGG | 0.574286 | 4.2:-68168429 | MS.gene85021:CDS |
GCACAATATTGGCAGGTGCA+GGG | 0.576796 | 4.2:-68169483 | MS.gene85021:CDS |
CTAGGATCTTAGATCTGAAG+AGG | 0.577929 | 4.2:-68171706 | MS.gene85021:CDS |
TTTATGAATCTGAGGAGCAA+TGG | 0.600846 | 4.2:-68172387 | MS.gene85021:CDS |
TGCCAATATTGTGCACGTAA+CGG | 0.607348 | 4.2:+68169492 | None:intergenic |
TTGACCTAGATTCAGGAATG+AGG | 0.609769 | 4.2:-68172336 | MS.gene85021:intron |
GTTGGGAATTCCACCTCCCA+AGG | 0.613288 | 4.2:-68168844 | MS.gene85021:intron |
GATTATGCTCAATCATAGCT+CGG | 0.614554 | 4.2:+68169027 | None:intergenic |
AATTGAGAAAAGGCAAATAG+GGG | 0.620222 | 4.2:-68171642 | MS.gene85021:CDS |
AGATATGTCATAATATCGCA+AGG | 0.635346 | 4.2:+68171667 | None:intergenic |
AATCTTTACCTTGTACAGTG+TGG | 0.647262 | 4.2:+68169438 | None:intergenic |
ATGAAATTATGTACCTTGGG+AGG | 0.648793 | 4.2:+68168831 | None:intergenic |
TCTTCAAACGACACAACTCG+AGG | 0.694248 | 4.2:+68173776 | None:intergenic |
GCAAGAACACGAGAACGTTG+AGG | 0.695486 | 4.2:+68169460 | None:intergenic |
AAAGCTGCTCAGATGCTCAG+TGG | 0.697893 | 4.2:-68172361 | MS.gene85021:CDS |
TGATATGAAACAGTGATGGA+GGG | 0.718525 | 4.2:-68174557 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATAAGAAAAAAAATTGAA+TGG | - | chr4.2:68173584-68173603 | MS.gene85021:intron | 10.0% |
!! | TTTACTTGAAAATAAAATTT+AGG | + | chr4.2:68170751-68170770 | None:intergenic | 10.0% |
!!! | AATTTTTAATGATTTATTTC+AGG | - | chr4.2:68173919-68173938 | MS.gene85021:intron | 10.0% |
!!! | ATTTTAACTACAAAATAAAT+GGG | + | chr4.2:68168808-68168827 | None:intergenic | 10.0% |
!!! | TCAAATTTTAGATATTTTAT+GGG | + | chr4.2:68172543-68172562 | None:intergenic | 10.0% |
!!! | TTATTTTGATTTTTTTATCA+GGG | - | chr4.2:68170000-68170019 | MS.gene85021:intron | 10.0% |
!!! | TTCAAATTTTAGATATTTTA+TGG | + | chr4.2:68172544-68172563 | None:intergenic | 10.0% |
!!! | TTTAGTTTAGTTTTTTATTA+GGG | - | chr4.2:68167910-68167929 | MS.gene85021:intron | 10.0% |
!!! | TTTATTTTGATTTTTTTATC+AGG | - | chr4.2:68169999-68170018 | MS.gene85021:intron | 10.0% |
!!! | TTTTAGTTTAGTTTTTTATT+AGG | - | chr4.2:68167909-68167928 | MS.gene85021:intron | 10.0% |
!! | AACTTAAAAAAATATACAAG+GGG | - | chr4.2:68171658-68171677 | MS.gene85021:CDS | 15.0% |
!! | AATAGAATTTATATCTGAAA+TGG | - | chr4.2:68170210-68170229 | MS.gene85021:intron | 15.0% |
!! | CAACTTAAAAAAATATACAA+GGG | - | chr4.2:68171657-68171676 | MS.gene85021:CDS | 15.0% |
!! | CGAATAAATTATAAAAATAC+TGG | + | chr4.2:68171550-68171569 | None:intergenic | 15.0% |
!! | GTTTATGTTACAAATAAAAA+GGG | + | chr4.2:68171016-68171035 | None:intergenic | 15.0% |
!! | TCGTATATTAATAAAAACTT+AGG | + | chr4.2:68168273-68168292 | None:intergenic | 15.0% |
!! | TGGGTTAAATAAAATAATAT+GGG | - | chr4.2:68174049-68174068 | MS.gene85021:intron | 15.0% |
!! | TGTTTATGTTACAAATAAAA+AGG | + | chr4.2:68171017-68171036 | None:intergenic | 15.0% |
!!! | AAATTATAAAAATACTGGTT+TGG | + | chr4.2:68171545-68171564 | None:intergenic | 15.0% |
!!! | ATTTTGTAATAACTAGAAAA+AGG | + | chr4.2:68171440-68171459 | None:intergenic | 15.0% |
!!! | CATAACTATATACTTTTAAA+AGG | - | chr4.2:68174156-68174175 | MS.gene85021:intron | 15.0% |
!!! | CATTTTAACTACAAAATAAA+TGG | + | chr4.2:68168809-68168828 | None:intergenic | 15.0% |
!!! | TAAGTTTTTATTAATATACG+AGG | - | chr4.2:68168272-68168291 | MS.gene85021:CDS | 15.0% |
!!! | TTGTATATTTTTTTAAGTTG+CGG | + | chr4.2:68171657-68171676 | None:intergenic | 15.0% |
!!! | TTTATTTTGGATTTGAATAA+TGG | - | chr4.2:68169284-68169303 | MS.gene85021:intron | 15.0% |
!!! | TTTTAATTTCAGAATCATAA+AGG | - | chr4.2:68170266-68170285 | MS.gene85021:intron | 15.0% |
!!! | TTTTGTAATAACTAGAAAAA+GGG | + | chr4.2:68171439-68171458 | None:intergenic | 15.0% |
!!! | TTTTTCTAGTTATTACAAAA+TGG | - | chr4.2:68171439-68171458 | MS.gene85021:intron | 15.0% |
!! | AAAATAAAGTAAATACCTCA+AGG | + | chr4.2:68170078-68170097 | None:intergenic | 20.0% |
!! | AAATACCATAATAATAGTGT+CGG | + | chr4.2:68169528-68169547 | None:intergenic | 20.0% |
!! | AATAAGTTAAGGTGATATTT+GGG | + | chr4.2:68169196-68169215 | None:intergenic | 20.0% |
!! | AATCCATATTTGATTAATGT+CGG | - | chr4.2:68170107-68170126 | MS.gene85021:intron | 20.0% |
!! | AGTACAAGAAATTTATAACA+TGG | + | chr4.2:68169399-68169418 | None:intergenic | 20.0% |
!! | ATAGGTATGTATTACTTATT+TGG | - | chr4.2:68169008-68169027 | MS.gene85021:CDS | 20.0% |
!! | ATATGATATGATATAGACAT+AGG | - | chr4.2:68168647-68168666 | MS.gene85021:intron | 20.0% |
!! | ATCAATGAATATCTCAAAAA+TGG | - | chr4.2:68174245-68174264 | MS.gene85021:intron | 20.0% |
!! | ATCTCTCCATTAAAATTTAT+TGG | - | chr4.2:68171628-68171647 | MS.gene85021:intron | 20.0% |
!! | CTAATACAATCAATTCATAT+GGG | - | chr4.2:68174288-68174307 | MS.gene85021:intron | 20.0% |
!! | CTATTATTATGGTATTTGAT+AGG | - | chr4.2:68169531-68169550 | MS.gene85021:CDS | 20.0% |
!! | GAAAAGACTAATCATATTTA+TGG | - | chr4.2:68168203-68168222 | MS.gene85021:intron | 20.0% |
!! | GCAACTTAAAAAAATATACA+AGG | - | chr4.2:68171656-68171675 | MS.gene85021:CDS | 20.0% |
!! | TATGATATGATATAGACATA+GGG | - | chr4.2:68168648-68168667 | MS.gene85021:intron | 20.0% |
!! | TCATACATTTAATTGTGTTT+AGG | - | chr4.2:68172565-68172584 | MS.gene85021:intron | 20.0% |
!! | TCTAATACAATCAATTCATA+TGG | - | chr4.2:68174287-68174306 | MS.gene85021:intron | 20.0% |
!! | TGGCAGATTTATAATAATTT+AGG | + | chr4.2:68169947-68169966 | None:intergenic | 20.0% |
!! | TTATAATAATTTAGGCAAAC+AGG | + | chr4.2:68169939-68169958 | None:intergenic | 20.0% |
!! | TTCTATTCATATTAAAGATG+TGG | + | chr4.2:68170197-68170216 | None:intergenic | 20.0% |
!!! | AAAAGTTGTTCTCTTTATTT+TGG | - | chr4.2:68169271-68169290 | MS.gene85021:intron | 20.0% |
!!! | AAATAAAGAGAACAACTTTT+TGG | + | chr4.2:68169271-68169290 | None:intergenic | 20.0% |
!!! | AAATTATATTTTGAATGCTG+TGG | - | chr4.2:68172631-68172650 | MS.gene85021:intron | 20.0% |
!!! | AATAAAGAGAACAACTTTTT+GGG | + | chr4.2:68169270-68169289 | None:intergenic | 20.0% |
!!! | AGCAATTATTTTAACTTCAT+AGG | - | chr4.2:68168990-68169009 | MS.gene85021:intron | 20.0% |
!!! | ATATTCCTTATTTGTTTTTG+AGG | - | chr4.2:68173511-68173530 | MS.gene85021:intron | 20.0% |
!!! | ATGATTGTAATCTTTTGTTT+TGG | - | chr4.2:68168509-68168528 | MS.gene85021:intron | 20.0% |
!!! | CATTATATTATTGTCGATTA+TGG | + | chr4.2:68171042-68171061 | None:intergenic | 20.0% |
!!! | GTGGGTTAAATAAAATAATA+TGG | - | chr4.2:68174048-68174067 | MS.gene85021:intron | 20.0% |
!!! | TATTCCTTATTTGTTTTTGA+GGG | - | chr4.2:68173512-68173531 | MS.gene85021:intron | 20.0% |
!!! | TGTATATTTTTTTAAGTTGC+GGG | + | chr4.2:68171656-68171675 | None:intergenic | 20.0% |
!!! | TTATCTTCTTTTTATTCAAG+AGG | + | chr4.2:68171339-68171358 | None:intergenic | 20.0% |
!!! | TTTAAACATGATTTTAGTTC+TGG | - | chr4.2:68167933-68167952 | MS.gene85021:intron | 20.0% |
!!! | TTTTTCTTTTGAATTGAAGA+GGG | - | chr4.2:68172511-68172530 | MS.gene85021:intron | 20.0% |
!!! | TTTTTTCTTTTGAATTGAAG+AGG | - | chr4.2:68172510-68172529 | MS.gene85021:intron | 20.0% |
! | AAATACTATGTATTCAATGG+CGG | + | chr4.2:68169505-68169524 | None:intergenic | 25.0% |
! | AAATGAATACAAGGATAAAC+AGG | + | chr4.2:68170481-68170500 | None:intergenic | 25.0% |
! | AAATTGAATGAATAAACCCT+AGG | + | chr4.2:68167840-68167859 | None:intergenic | 25.0% |
! | AAATTGAGAAAAGGCAAATA+GGG | - | chr4.2:68170582-68170601 | MS.gene85021:intron | 25.0% |
! | AATAAAGCTTCACAACAAAT+AGG | + | chr4.2:68173545-68173564 | None:intergenic | 25.0% |
! | AATCTCCTAAAACTTAATGA+TGG | - | chr4.2:68174454-68174473 | MS.gene85021:CDS | 25.0% |
! | AATGTGATTCCTTATATATC+AGG | - | chr4.2:68172996-68173015 | MS.gene85021:intron | 25.0% |
! | ACATATCTCAAATTGAGAAA+AGG | - | chr4.2:68170573-68170592 | MS.gene85021:intron | 25.0% |
! | ACATATGCACTTTATATTAC+AGG | - | chr4.2:68172670-68172689 | MS.gene85021:intron | 25.0% |
! | ACGTTAAGAACAGAATTTAT+AGG | - | chr4.2:68170876-68170895 | MS.gene85021:intron | 25.0% |
! | AGAAAAAAAATTGAATGGTG+TGG | - | chr4.2:68173589-68173608 | MS.gene85021:intron | 25.0% |
! | AGTCTCTGCAAATTAAAAAA+CGG | - | chr4.2:68167979-68167998 | MS.gene85021:intron | 25.0% |
! | ATAAAGCTTCACAACAAATA+GGG | + | chr4.2:68173544-68173563 | None:intergenic | 25.0% |
! | ATAATTTATTCGATGTCCAT+TGG | - | chr4.2:68171558-68171577 | MS.gene85021:intron | 25.0% |
! | ATAGCAGAATATGAAAACTA+TGG | - | chr4.2:68168673-68168692 | MS.gene85021:intron | 25.0% |
! | ATATAGCAAATGATAAGCTA+TGG | - | chr4.2:68172103-68172122 | MS.gene85021:intron | 25.0% |
! | ATATATGAGGTGACTTTATT+CGG | - | chr4.2:68168181-68168200 | MS.gene85021:intron | 25.0% |
! | ATATTACAGGGAAATTAATG+AGG | - | chr4.2:68172683-68172702 | MS.gene85021:intron | 25.0% |
! | ATGAAACACAATTCAACATT+AGG | - | chr4.2:68168619-68168638 | MS.gene85021:intron | 25.0% |
! | ATGTGAACTTCTTGATTTAT+GGG | - | chr4.2:68172405-68172424 | MS.gene85021:CDS | 25.0% |
! | ATGTTGAAATTCAATATGAG+GGG | - | chr4.2:68171593-68171612 | MS.gene85021:intron | 25.0% |
! | CAATAAGTTAAGGTGATATT+TGG | + | chr4.2:68169197-68169216 | None:intergenic | 25.0% |
! | CATATGCACTTTATATTACA+GGG | - | chr4.2:68172671-68172690 | MS.gene85021:intron | 25.0% |
! | CATGTTGAAATTCAATATGA+GGG | - | chr4.2:68171592-68171611 | MS.gene85021:intron | 25.0% |
! | CCAAAACTAAAGAATTGATT+TGG | - | chr4.2:68171512-68171531 | MS.gene85021:intron | 25.0% |
! | CCATAAATTATGAATTGTGA+TGG | - | chr4.2:68172441-68172460 | MS.gene85021:intron | 25.0% |
! | CCATCACAATTCATAATTTA+TGG | + | chr4.2:68172444-68172463 | None:intergenic | 25.0% |
! | CCTGAAAAAAAATGAATACA+AGG | + | chr4.2:68170490-68170509 | None:intergenic | 25.0% |
! | GCAAACTTTATACAAATATC+AGG | - | chr4.2:68173233-68173252 | MS.gene85021:intron | 25.0% |
! | TAGCAGAATATGAAAACTAT+GGG | - | chr4.2:68168674-68168693 | MS.gene85021:intron | 25.0% |
! | TATATGAAAAAATTACCTGC+TGG | + | chr4.2:68173997-68174016 | None:intergenic | 25.0% |
! | TATTTCCGACACTATTATTA+TGG | - | chr4.2:68169520-68169539 | MS.gene85021:CDS | 25.0% |
! | TATTTGTCGTATTAGAGTTA+TGG | + | chr4.2:68168718-68168737 | None:intergenic | 25.0% |
! | TCATATTGAATTTCAACATG+AGG | + | chr4.2:68171592-68171611 | None:intergenic | 25.0% |
! | TCATGTTGAAATTCAATATG+AGG | - | chr4.2:68171591-68171610 | MS.gene85021:intron | 25.0% |
! | TCCATCATAATCAAATATGA+CGG | - | chr4.2:68171262-68171281 | MS.gene85021:intron | 25.0% |
! | TGAAAATAAAATTTAGGTCG+AGG | + | chr4.2:68170745-68170764 | None:intergenic | 25.0% |
! | TTTGGTTATTAGAGAGAAAT+TGG | - | chr4.2:68169809-68169828 | MS.gene85021:intron | 25.0% |
!! | AAAAGTATATAGTTATGTCG+TGG | + | chr4.2:68174153-68174172 | None:intergenic | 25.0% |
!! | AAACAGACATGTTCAAATTT+TGG | + | chr4.2:68169967-68169986 | None:intergenic | 25.0% |
!! | AATATACAAGGGGATTTTTA+TGG | - | chr4.2:68171668-68171687 | MS.gene85021:CDS | 25.0% |
!! | AGTATTGAATTTGAAGTACA+AGG | - | chr4.2:68170392-68170411 | MS.gene85021:intron | 25.0% |
!! | ATTTTGTGAATTCTGTTTTG+AGG | - | chr4.2:68168482-68168501 | MS.gene85021:intron | 25.0% |
!! | ATTTTGTGTTTCAGTGTTAT+CGG | - | chr4.2:68168310-68168329 | MS.gene85021:intron | 25.0% |
!! | CAACAATTTTTGAATTTGCA+AGG | - | chr4.2:68168110-68168129 | MS.gene85021:intron | 25.0% |
!! | CATTAATAAAGCATCATTCT+TGG | - | chr4.2:68170350-68170369 | MS.gene85021:intron | 25.0% |
!! | CCTGAAAGTATAATAATTGT+GGG | + | chr4.2:68173753-68173772 | None:intergenic | 25.0% |
!! | GAAAACCATCATTAAGTTTT+AGG | + | chr4.2:68174462-68174481 | None:intergenic | 25.0% |
!!! | AACATGTTATGTTGTTTTTG+TGG | - | chr4.2:68172376-68172395 | MS.gene85021:CDS | 25.0% |
!!! | ACATGTTATGTTGTTTTTGT+GGG | - | chr4.2:68172377-68172396 | MS.gene85021:CDS | 25.0% |
!!! | ACTAGGTTTTTTTACAAACT+TGG | + | chr4.2:68172259-68172278 | None:intergenic | 25.0% |
!!! | ATACTTTTTAGATGAAGTCT+CGG | + | chr4.2:68169622-68169641 | None:intergenic | 25.0% |
!!! | ATCAGTTTATTGTTTCTGAA+CGG | - | chr4.2:68173272-68173291 | MS.gene85021:intron | 25.0% |
!!! | CCAAATCAATTCTTTAGTTT+TGG | + | chr4.2:68171515-68171534 | None:intergenic | 25.0% |
!!! | CCTTGTATTCATTTTTTTTC+AGG | - | chr4.2:68170487-68170506 | MS.gene85021:intron | 25.0% |
!!! | GCTTTTTGAAAAATCAGAAA+TGG | - | chr4.2:68172080-68172099 | MS.gene85021:intron | 25.0% |
!!! | TAAATTTTTTCGTATTTGCC+AGG | - | chr4.2:68170299-68170318 | MS.gene85021:intron | 25.0% |
!!! | TGTTGTTTTGTTATAGGTTT+TGG | - | chr4.2:68169791-68169810 | MS.gene85021:intron | 25.0% |
AAACCTGATATCAGCTTATT+TGG | - | chr4.2:68168136-68168155 | MS.gene85021:intron | 30.0% | |
AAAGTCACCTCATATATTAC+CGG | + | chr4.2:68168178-68168197 | None:intergenic | 30.0% | |
AAATAAAAAGGGAGAGACAA+GGG | + | chr4.2:68171005-68171024 | None:intergenic | 30.0% | |
AAGGATAAACAGGTAAGATA+AGG | + | chr4.2:68170471-68170490 | None:intergenic | 30.0% | |
AAGGTTCAAAATTACTACAG+AGG | + | chr4.2:68172327-68172346 | None:intergenic | 30.0% | |
AATCAAATCTTTCAAGCTGT+AGG | + | chr4.2:68173714-68173733 | None:intergenic | 30.0% | |
AATTGAGAAAAGGCAAATAG+GGG | - | chr4.2:68170583-68170602 | MS.gene85021:intron | 30.0% | |
AATTGCTTGTTTATACCTTG+AGG | - | chr4.2:68170060-68170079 | MS.gene85021:intron | 30.0% | |
ACCGTCATATTTGATTATGA+TGG | + | chr4.2:68171266-68171285 | None:intergenic | 30.0% | |
AGATATGTCATAATATCGCA+AGG | + | chr4.2:68170561-68170580 | None:intergenic | 30.0% | |
AGCATCAAGAATGATTTATG+AGG | - | chr4.2:68173783-68173802 | MS.gene85021:CDS | 30.0% | |
AGCCAGCATATTATTTGTAT+AGG | + | chr4.2:68169047-68169066 | None:intergenic | 30.0% | |
AGGAATTATATAACAACGAG+AGG | - | chr4.2:68168576-68168595 | MS.gene85021:intron | 30.0% | |
AGGTTCAAAATTACTACAGA+GGG | + | chr4.2:68172326-68172345 | None:intergenic | 30.0% | |
ATAAGAAAATCATTGTCAGC+AGG | + | chr4.2:68173674-68173693 | None:intergenic | 30.0% | |
ATAATAGTCTCATGATGCTT+TGG | - | chr4.2:68171467-68171486 | MS.gene85021:intron | 30.0% | |
ATTTATGAGGATAGGATGAA+GGG | - | chr4.2:68173796-68173815 | MS.gene85021:CDS | 30.0% | |
ATTTATGGCGTGACTTTATT+CGG | - | chr4.2:68168218-68168237 | MS.gene85021:intron | 30.0% | |
CAAACTTTAATAACCTGATG+TGG | + | chr4.2:68173081-68173100 | None:intergenic | 30.0% | |
CAAATTGAGAAAAGGCAAAT+AGG | - | chr4.2:68170581-68170600 | MS.gene85021:intron | 30.0% | |
CAAGAATGATTTATGAGGAT+AGG | - | chr4.2:68173788-68173807 | MS.gene85021:CDS | 30.0% | |
CACAATCTATGTTTCAAATG+TGG | - | chr4.2:68171784-68171803 | MS.gene85021:intron | 30.0% | |
CCAAATACACCTGATATATA+AGG | + | chr4.2:68173008-68173027 | None:intergenic | 30.0% | |
CCCACAATTATTATACTTTC+AGG | - | chr4.2:68173750-68173769 | MS.gene85021:intron | 30.0% | |
CCTTATATATCAGGTGTATT+TGG | - | chr4.2:68173005-68173024 | MS.gene85021:intron | 30.0% | |
CGGAAATACTATGTATTCAA+TGG | + | chr4.2:68169508-68169527 | None:intergenic | 30.0% | |
CTAAATTGAATCACATATGC+TGG | - | chr4.2:68170169-68170188 | MS.gene85021:intron | 30.0% | |
CTCCTATACAAATAATATGC+TGG | - | chr4.2:68169042-68169061 | MS.gene85021:CDS | 30.0% | |
CTGAAAAATAAGTATGACTC+TGG | + | chr4.2:68173422-68173441 | None:intergenic | 30.0% | |
CTGTATAAATTGTAGAAAGG+TGG | - | chr4.2:68169555-68169574 | MS.gene85021:intron | 30.0% | |
GAACCGACATTAATCAAATA+TGG | + | chr4.2:68170113-68170132 | None:intergenic | 30.0% | |
GACATGAAATTATGTACCTT+GGG | + | chr4.2:68173400-68173419 | None:intergenic | 30.0% | |
GATGTGAACTTCTTGATTTA+TGG | - | chr4.2:68172404-68172423 | MS.gene85021:CDS | 30.0% | |
GATTGTGAATCACAATATGT+AGG | + | chr4.2:68171771-68171790 | None:intergenic | 30.0% | |
GCAGAATTATCTTAAAACAC+AGG | - | chr4.2:68170917-68170936 | MS.gene85021:intron | 30.0% | |
GGACTGTATAAATTGTAGAA+AGG | - | chr4.2:68169552-68169571 | MS.gene85021:intron | 30.0% | |
GGTATGTATTACTTATTTGG+AGG | - | chr4.2:68169011-68169030 | MS.gene85021:CDS | 30.0% | |
GTAATAACTAGAAAAAGGGA+TGG | + | chr4.2:68171435-68171454 | None:intergenic | 30.0% | |
GTGATTCAATTTAGACATTG+TGG | + | chr4.2:68170163-68170182 | None:intergenic | 30.0% | |
GTGTTGAATTCCAAAATGAT+AGG | - | chr4.2:68171715-68171734 | MS.gene85021:CDS | 30.0% | |
GTGTTGTATCTTCATATCTT+TGG | - | chr4.2:68173100-68173119 | MS.gene85021:intron | 30.0% | |
TACTCCCTCAAAAACAAATA+AGG | + | chr4.2:68173519-68173538 | None:intergenic | 30.0% | |
TATCAGACAAAATACAAGAG+AGG | + | chr4.2:68171100-68171119 | None:intergenic | 30.0% | |
TCAAATTCAATACTTCATGC+TGG | + | chr4.2:68170386-68170405 | None:intergenic | 30.0% | |
TGAAAATGATAGCTTCTGAA+GGG | - | chr4.2:68170417-68170436 | MS.gene85021:intron | 30.0% | |
TGGGAGAGGAAATTATTAAT+TGG | + | chr4.2:68170976-68170995 | None:intergenic | 30.0% | |
TGTTACTATGTCAAGCATTA+GGG | - | chr4.2:68169645-68169664 | MS.gene85021:intron | 30.0% | |
TGTTGAAATTCAATATGAGG+GGG | - | chr4.2:68171594-68171613 | MS.gene85021:intron | 30.0% | |
TTATTTAACCCACTTAAGAG+TGG | + | chr4.2:68174041-68174060 | None:intergenic | 30.0% | |
TTGAAAATGATAGCTTCTGA+AGG | - | chr4.2:68170416-68170435 | MS.gene85021:intron | 30.0% | |
TTGTCTTCTTAAAAACAGCA+AGG | + | chr4.2:68170825-68170844 | None:intergenic | 30.0% | |
TTGTTAAATGAATGCATGTC+CGG | - | chr4.2:68168877-68168896 | MS.gene85021:intron | 30.0% | |
TTGTTACTATGTCAAGCATT+AGG | - | chr4.2:68169644-68169663 | MS.gene85021:intron | 30.0% | |
TTTACAAACTTGGTCATTCT+GGG | + | chr4.2:68172249-68172268 | None:intergenic | 30.0% | |
TTTAGGCAAACAGGTAAATA+TGG | + | chr4.2:68169930-68169949 | None:intergenic | 30.0% | |
TTTAGGTCGAGGAATTATAT+TGG | + | chr4.2:68170734-68170753 | None:intergenic | 30.0% | |
! | AATGGTGATGAAAACTTAAG+AGG | + | chr4.2:68170642-68170661 | None:intergenic | 30.0% |
! | ATGGTGATGAAAACTTAAGA+GGG | + | chr4.2:68170641-68170660 | None:intergenic | 30.0% |
! | ATTCTCTTTTTACTCAACCT+AGG | - | chr4.2:68167820-68167839 | MS.gene85021:intron | 30.0% |
! | CGGGATCCAATAAATTTTAA+TGG | + | chr4.2:68171637-68171656 | None:intergenic | 30.0% |
! | GAGTACTTTTATGAACTAAG+AGG | + | chr4.2:68173861-68173880 | None:intergenic | 30.0% |
! | GATGGTGCATTTTTATAATC+TGG | - | chr4.2:68172459-68172478 | MS.gene85021:intron | 30.0% |
! | GCCTGAAAGTATAATAATTG+TGG | + | chr4.2:68173754-68173773 | None:intergenic | 30.0% |
! | GGATTTGTATCCTATCATTT+TGG | + | chr4.2:68171728-68171747 | None:intergenic | 30.0% |
! | TCTTGTCGCATTAATTTTTG+TGG | - | chr4.2:68172847-68172866 | MS.gene85021:intron | 30.0% |
! | TTCTCTTTTTACTCAACCTA+GGG | - | chr4.2:68167821-68167840 | MS.gene85021:intron | 30.0% |
! | TTTTACAAACTTGGTCATTC+TGG | + | chr4.2:68172250-68172269 | None:intergenic | 30.0% |
!! | AAATGATGTTTTGGATAGCA+TGG | - | chr4.2:68174513-68174532 | MS.gene85021:CDS | 30.0% |
!! | AATGATGTTTTGGATAGCAT+GGG | - | chr4.2:68174514-68174533 | MS.gene85021:CDS | 30.0% |
!! | ACAGAGTAGAAGTTCTAAAA+TGG | + | chr4.2:68170660-68170679 | None:intergenic | 30.0% |
!! | TAAAAATACTGGTTTGGACT+CGG | + | chr4.2:68171539-68171558 | None:intergenic | 30.0% |
!! | TTAATTTTTGTGGACTTGGT+TGG | - | chr4.2:68172857-68172876 | MS.gene85021:intron | 30.0% |
!!! | AAGTTTTAGGAGATTGAAGA+TGG | + | chr4.2:68174449-68174468 | None:intergenic | 30.0% |
!!! | ACTGCACAGTTTTAAAGTTT+TGG | + | chr4.2:68174195-68174214 | None:intergenic | 30.0% |
!!! | ATTTTGGAATTCAACACAAG+AGG | + | chr4.2:68171712-68171731 | None:intergenic | 30.0% |
!!! | CATTTTAGTTATTTTGGCCA+GGG | + | chr4.2:68171412-68171431 | None:intergenic | 30.0% |
!!! | GGATGGCATTTTAGTTATTT+TGG | + | chr4.2:68171418-68171437 | None:intergenic | 30.0% |
!!! | GTCACTTGTTGTTTTGTTAT+AGG | - | chr4.2:68169785-68169804 | MS.gene85021:intron | 30.0% |
!!! | GTTTTAAGATAATTCTGCAG+AGG | + | chr4.2:68170915-68170934 | None:intergenic | 30.0% |
!!! | TCAAGCTCTAAATGATGTTT+TGG | - | chr4.2:68174504-68174523 | MS.gene85021:CDS | 30.0% |
AAATCTTTCAAGCTGTAGGA+CGG | + | chr4.2:68173710-68173729 | None:intergenic | 35.0% | |
AAGATTTGTGCATCTGTTGA+AGG | - | chr4.2:68171937-68171956 | MS.gene85021:intron | 35.0% | |
AATCTTTACCTTGTACAGTG+TGG | + | chr4.2:68172790-68172809 | None:intergenic | 35.0% | |
ACTGTTCTATCTTCTGTCTT+TGG | + | chr4.2:68167724-68167743 | None:intergenic | 35.0% | |
AGAAGAATTGAAACCACATC+AGG | - | chr4.2:68173065-68173084 | MS.gene85021:intron | 35.0% | |
AGTAGCATAAAATGTGAGTG+AGG | - | chr4.2:68171822-68171841 | MS.gene85021:intron | 35.0% | |
AGTGAAATTGTCTGGAAGAA+GGG | + | chr4.2:68173170-68173189 | None:intergenic | 35.0% | |
ATATCTTTGGTTGCCATGAT+GGG | - | chr4.2:68173113-68173132 | MS.gene85021:intron | 35.0% | |
ATGAAATTATGTACCTTGGG+AGG | + | chr4.2:68173397-68173416 | None:intergenic | 35.0% | |
ATGAACCTTTGCCTTCAATT+GGG | - | chr4.2:68171874-68171893 | MS.gene85021:CDS | 35.0% | |
ATGGTTACCGGTAATATATG+AGG | - | chr4.2:68168168-68168187 | MS.gene85021:intron | 35.0% | |
CAAATAAAAAGGGAGAGACA+AGG | + | chr4.2:68171006-68171025 | None:intergenic | 35.0% | |
CAAATGACATTCTTCAAGCT+AGG | - | chr4.2:68167774-68167793 | MS.gene85021:intron | 35.0% | |
CATGAGCTTAATTGTAGTAG+CGG | + | chr4.2:68169167-68169186 | None:intergenic | 35.0% | |
CATGTCACGTACAAAATCAT+TGG | - | chr4.2:68170243-68170262 | MS.gene85021:intron | 35.0% | |
CTAAATCCAGCTCAAATGAA+AGG | - | chr4.2:68172288-68172307 | MS.gene85021:intron | 35.0% | |
CTGAACAGAGCAATAAGTTA+AGG | + | chr4.2:68169207-68169226 | None:intergenic | 35.0% | |
CTGCTAAGTGTAACTGATAT+TGG | - | chr4.2:68171158-68171177 | MS.gene85021:intron | 35.0% | |
CTGGCAATTATAACGATGTT+TGG | - | chr4.2:68167952-68167971 | MS.gene85021:intron | 35.0% | |
CTGTCCGCAATGATATATAT+TGG | - | chr4.2:68171222-68171241 | MS.gene85021:intron | 35.0% | |
GAATCAGTGTTACCGAATAT+CGG | - | chr4.2:68171186-68171205 | MS.gene85021:intron | 35.0% | |
GATGTTAGATGCTTTCTATG+AGG | + | chr4.2:68172166-68172185 | None:intergenic | 35.0% | |
GATTATGCTCAATCATAGCT+CGG | + | chr4.2:68173201-68173220 | None:intergenic | 35.0% | |
GATTTATGAGGATAGGATGA+AGG | - | chr4.2:68173795-68173814 | MS.gene85021:CDS | 35.0% | |
GCAAGTTATATCTCCCAATA+TGG | + | chr4.2:68170141-68170160 | None:intergenic | 35.0% | |
GCATCATGAGACTATTATAG+TGG | + | chr4.2:68171465-68171484 | None:intergenic | 35.0% | |
GGACATGAAATTATGTACCT+TGG | + | chr4.2:68173401-68173420 | None:intergenic | 35.0% | |
GGTTCAAAATTACTACAGAG+GGG | + | chr4.2:68172325-68172344 | None:intergenic | 35.0% | |
GTAGCATAAAATGTGAGTGA+GGG | - | chr4.2:68171823-68171842 | MS.gene85021:intron | 35.0% | |
GTTCAAAATTACTACAGAGG+GGG | + | chr4.2:68172324-68172343 | None:intergenic | 35.0% | |
TATGAACTAAGAGGCTGTAA+TGG | + | chr4.2:68173852-68173871 | None:intergenic | 35.0% | |
TATTCGATGTCCATTGGATT+TGG | - | chr4.2:68171564-68171583 | MS.gene85021:intron | 35.0% | |
TCAATATGAGGGGGTTATTA+TGG | - | chr4.2:68171603-68171622 | MS.gene85021:intron | 35.0% | |
TCACATTATATTGACCAGTG+TGG | + | chr4.2:68172983-68173002 | None:intergenic | 35.0% | |
TCGGCCAATATATATCATTG+CGG | + | chr4.2:68171229-68171248 | None:intergenic | 35.0% | |
TGCTAACCAATAACCCATAT+CGG | + | chr4.2:68168905-68168924 | None:intergenic | 35.0% | |
TTAGAAGTCGATGTACACAT+TGG | + | chr4.2:68172358-68172377 | None:intergenic | 35.0% | |
TTCCTTTACCCACCATATAA+CGG | - | chr4.2:68169454-68169473 | MS.gene85021:CDS | 35.0% | |
TTGAAGGCAGTATATGTTCA+GGG | - | chr4.2:68172058-68172077 | MS.gene85021:intron | 35.0% | |
TTTATGAATCTGAGGAGCAA+TGG | - | chr4.2:68169838-68169857 | MS.gene85021:intron | 35.0% | |
! | ATGATTTGTGCATCTGTTGA+AGG | - | chr4.2:68172042-68172061 | MS.gene85021:intron | 35.0% |
! | CGCATTAATTTTTGTGGACT+TGG | - | chr4.2:68172853-68172872 | MS.gene85021:intron | 35.0% |
! | GGATTTAGCTTAGTAGAACT+AGG | + | chr4.2:68172276-68172295 | None:intergenic | 35.0% |
! | GGGTAATTGATGATACATTC+AGG | - | chr4.2:68170020-68170039 | MS.gene85021:intron | 35.0% |
! | GTTATTGGTTAGCATTCACA+TGG | - | chr4.2:68168911-68168930 | MS.gene85021:intron | 35.0% |
! | TTTGATCATGAGTGTTGTGT+TGG | - | chr4.2:68174415-68174434 | MS.gene85021:intron | 35.0% |
!! | AAATTAATGAGGAAGCGCTT+GGG | - | chr4.2:68172694-68172713 | MS.gene85021:intron | 35.0% |
!! | AAGCGGATTATGTAATGAGT+TGG | - | chr4.2:68171292-68171311 | MS.gene85021:intron | 35.0% |
!! | AGCGGATTATGTAATGAGTT+GGG | - | chr4.2:68171293-68171312 | MS.gene85021:intron | 35.0% |
!! | TCTGCAAAAGCATCAATTTC+AGG | + | chr4.2:68173048-68173067 | None:intergenic | 35.0% |
!! | TCTTGTAGCTTTGATGAGTT+AGG | - | chr4.2:68173352-68173371 | MS.gene85021:intron | 35.0% |
!! | TTTAGATTCTAGAACTGAGC+TGG | - | chr4.2:68170777-68170796 | MS.gene85021:intron | 35.0% |
!!! | ATATCACTGTTTTTTCCCTG+TGG | - | chr4.2:68170686-68170705 | MS.gene85021:intron | 35.0% |
!!! | CACAGTTTTAAAGTTTTGGC+TGG | + | chr4.2:68174191-68174210 | None:intergenic | 35.0% |
!!! | GCATTTTAGTTATTTTGGCC+AGG | + | chr4.2:68171413-68171432 | None:intergenic | 35.0% |
!!! | TTTTTCAGGTTTGCTATGCT+AGG | - | chr4.2:68170501-68170520 | MS.gene85021:intron | 35.0% |
AAAGAGGAAAAGGAAAGGTG+GGG | + | chr4.2:68172941-68172960 | None:intergenic | 40.0% | |
AAATTATGTACCTTGGGAGG+TGG | + | chr4.2:68173394-68173413 | None:intergenic | 40.0% | |
AAGCTGAAACATACCCATCA+TGG | + | chr4.2:68173129-68173148 | None:intergenic | 40.0% | |
ACAAAGAGGAAAAGGAAAGG+TGG | + | chr4.2:68172943-68172962 | None:intergenic | 40.0% | |
ACAACAAGTGACAATCAGCA+TGG | + | chr4.2:68169777-68169796 | None:intergenic | 40.0% | |
ACACTGAAGAGTTGCAAAGA+TGG | - | chr4.2:68173969-68173988 | MS.gene85021:intron | 40.0% | |
ACATGAGGATCCAAATCCAA+TGG | + | chr4.2:68171577-68171596 | None:intergenic | 40.0% | |
ACTAAACATGAACGTTCCTG+AGG | - | chr4.2:68173640-68173659 | MS.gene85021:intron | 40.0% | |
ACTCATCAAAGCTACAAGAG+AGG | + | chr4.2:68173351-68173370 | None:intergenic | 40.0% | |
AGAGAAACCTTCTGCAGTAT+GGG | + | chr4.2:68172918-68172937 | None:intergenic | 40.0% | |
AGAGGGAAAAAGTAACATGC+AGG | + | chr4.2:68170624-68170643 | None:intergenic | 40.0% | |
AGATCTGAAGAGGAAGTTCT+TGG | - | chr4.2:68170529-68170548 | MS.gene85021:intron | 40.0% | |
AGATGCACAAATCATGTCTG+TGG | + | chr4.2:68172037-68172056 | None:intergenic | 40.0% | |
AGTGGAGCTTTCAGAGATAT+TGG | + | chr4.2:68174023-68174042 | None:intergenic | 40.0% | |
ATTTGCCTTATATACTGCCC+TGG | - | chr4.2:68171392-68171411 | MS.gene85021:intron | 40.0% | |
CAAAGAGGAAAAGGAAAGGT+GGG | + | chr4.2:68172942-68172961 | None:intergenic | 40.0% | |
CACTGAAGAGTTGCAAAGAT+GGG | - | chr4.2:68173970-68173989 | MS.gene85021:intron | 40.0% | |
CAGACAAAGAGGAAAAGGAA+AGG | + | chr4.2:68172946-68172965 | None:intergenic | 40.0% | |
CAGTGAAATTGTCTGGAAGA+AGG | + | chr4.2:68173171-68173190 | None:intergenic | 40.0% | |
CATATCTTTGGTTGCCATGA+TGG | - | chr4.2:68173112-68173131 | MS.gene85021:intron | 40.0% | |
CGCAATAAAATCACGCTATG+TGG | + | chr4.2:68168037-68168056 | None:intergenic | 40.0% | |
CTAGGATCTTAGATCTGAAG+AGG | - | chr4.2:68170519-68170538 | MS.gene85021:intron | 40.0% | |
CTGACACTTAGAACAGTTAG+TGG | + | chr4.2:68168853-68168872 | None:intergenic | 40.0% | |
GAGATTCCTTTCATTTGAGC+TGG | + | chr4.2:68172297-68172316 | None:intergenic | 40.0% | |
GATGAACCTTTGCCTTCAAT+TGG | - | chr4.2:68171873-68171892 | MS.gene85021:CDS | 40.0% | |
GATGAAGGGATCTATTGATC+AGG | - | chr4.2:68173810-68173829 | MS.gene85021:CDS | 40.0% | |
GATGGATAAACCTGCAACAT+CGG | + | chr4.2:68171248-68171267 | None:intergenic | 40.0% | |
GGCAAACAGGTAAATATGGT+TGG | + | chr4.2:68169926-68169945 | None:intergenic | 40.0% | |
GTACACATTGGCAAATCACA+AGG | + | chr4.2:68172346-68172365 | None:intergenic | 40.0% | |
GTCAAATGAAGCAGACAAAG+AGG | + | chr4.2:68172957-68172976 | None:intergenic | 40.0% | |
GTTGAAGGCAGTATATGTTC+AGG | - | chr4.2:68172057-68172076 | MS.gene85021:intron | 40.0% | |
TATATATTGGCCGATGTTGC+AGG | - | chr4.2:68171235-68171254 | MS.gene85021:intron | 40.0% | |
TCAACACAAGAGGCTTATGT+TGG | + | chr4.2:68171702-68171721 | None:intergenic | 40.0% | |
TGAAAGCTCCACTCTTAAGT+GGG | - | chr4.2:68174030-68174049 | MS.gene85021:intron | 40.0% | |
TGAAGCAGACAAAGAGGAAA+AGG | + | chr4.2:68172951-68172970 | None:intergenic | 40.0% | |
TGCCAATATTGTGCACGTAA+CGG | + | chr4.2:68172736-68172755 | None:intergenic | 40.0% | |
TGGCCAAATAAGCTGATATC+AGG | + | chr4.2:68168142-68168161 | None:intergenic | 40.0% | |
TTAGCAGATCGGTACAAGTT+GGG | + | chr4.2:68172188-68172207 | None:intergenic | 40.0% | |
TTGACCTAGATTCAGGAATG+AGG | - | chr4.2:68169889-68169908 | MS.gene85021:intron | 40.0% | |
! | ACAGAGTTTTGCTGAAGAGT+TGG | - | chr4.2:68168367-68168386 | MS.gene85021:intron | 40.0% |
! | ATTCTGCGACCCTTGTTTAT+GGG | - | chr4.2:68174364-68174383 | MS.gene85021:intron | 40.0% |
! | CAGAGTTTTGCTGAAGAGTT+GGG | - | chr4.2:68168368-68168387 | MS.gene85021:intron | 40.0% |
! | CTTCATTTGACTTTCCACAC+TGG | - | chr4.2:68172966-68172985 | MS.gene85021:intron | 40.0% |
! | GGTTTTCTCTTGCAGATTGT+TGG | - | chr4.2:68174475-68174494 | MS.gene85021:CDS | 40.0% |
! | GTCGGTTCTTTGACCATATT+GGG | - | chr4.2:68170125-68170144 | MS.gene85021:intron | 40.0% |
! | TATTCTGCGACCCTTGTTTA+TGG | - | chr4.2:68174363-68174382 | MS.gene85021:intron | 40.0% |
! | TTTGTGGACTTGGTTGGATT+AGG | - | chr4.2:68172863-68172882 | MS.gene85021:intron | 40.0% |
!! | AGTGGTATTGACCTAGATTC+AGG | - | chr4.2:68169882-68169901 | MS.gene85021:intron | 40.0% |
!! | AGTTGTGTCGTTTGAAGAAC+AGG | - | chr4.2:68168454-68168473 | MS.gene85021:CDS | 40.0% |
!! | GAAATTAATGAGGAAGCGCT+TGG | - | chr4.2:68172693-68172712 | MS.gene85021:intron | 40.0% |
!! | TACCGTTATATGGTGGGTAA+AGG | + | chr4.2:68169459-68169478 | None:intergenic | 40.0% |
!! | TGTCGGTTCTTTGACCATAT+TGG | - | chr4.2:68170124-68170143 | MS.gene85021:intron | 40.0% |
AAACATGAACGTTCCTGAGG+AGG | - | chr4.2:68173643-68173662 | MS.gene85021:intron | 45.0% | |
AAAGAGACTCTTGTCACCAC+AGG | + | chr4.2:68170705-68170724 | None:intergenic | 45.0% | |
AACATGAACGTTCCTGAGGA+GGG | - | chr4.2:68173644-68173663 | MS.gene85021:intron | 45.0% | |
AAGAGACTCTTGTCACCACA+GGG | + | chr4.2:68170704-68170723 | None:intergenic | 45.0% | |
ACAACGCTACCGTTATATGG+TGG | + | chr4.2:68169466-68169485 | None:intergenic | 45.0% | |
ACCTTTGCCTTCAATTGGGT+TGG | - | chr4.2:68171878-68171897 | MS.gene85021:CDS | 45.0% | |
ACTCTGATGAGACTCCTGTT+GGG | - | chr4.2:68173877-68173896 | MS.gene85021:CDS | 45.0% | |
AGTCCCTGACGTCAACTTAT+CGG | - | chr4.2:68168010-68168029 | MS.gene85021:intron | 45.0% | |
CAACGCTACCGTTATATGGT+GGG | + | chr4.2:68169465-68169484 | None:intergenic | 45.0% | |
CATTGACAGCATCATCATCC+TGG | + | chr4.2:68170320-68170339 | None:intergenic | 45.0% | |
CCAACAACGCTACCGTTATA+TGG | + | chr4.2:68169469-68169488 | None:intergenic | 45.0% | |
CCATATAACGGTAGCGTTGT+TGG | - | chr4.2:68169466-68169485 | MS.gene85021:CDS | 45.0% | |
CCTTTGCCTTCAATTGGGTT+GGG | - | chr4.2:68171879-68171898 | MS.gene85021:CDS | 45.0% | |
CTGAAAGCTCCACTCTTAAG+TGG | - | chr4.2:68174029-68174048 | MS.gene85021:intron | 45.0% | |
CTTAGCAGATCGGTACAAGT+TGG | + | chr4.2:68172189-68172208 | None:intergenic | 45.0% | |
GAGACCTCATTCCTGAATCT+AGG | + | chr4.2:68169896-68169915 | None:intergenic | 45.0% | |
GAGAGAAACCTTCTGCAGTA+TGG | + | chr4.2:68172919-68172938 | None:intergenic | 45.0% | |
GAGAGGCAAACACACAGATT+AGG | + | chr4.2:68173334-68173353 | None:intergenic | 45.0% | |
GATCTATCCCATACTGCAGA+AGG | - | chr4.2:68172908-68172927 | MS.gene85021:intron | 45.0% | |
GATGAGTTAGGCACACTGTT+GGG | - | chr4.2:68173364-68173383 | MS.gene85021:intron | 45.0% | |
GATGTGCAACACTGCTATAG+AGG | + | chr4.2:68169086-68169105 | None:intergenic | 45.0% | |
GCAATCTCTTTCTGTGTCTC+AGG | + | chr4.2:68168404-68168423 | None:intergenic | 45.0% | |
GGGAAAAAGTAACATGCAGG+AGG | + | chr4.2:68170621-68170640 | None:intergenic | 45.0% | |
GTTACGTGCACAATATTGGC+AGG | - | chr4.2:68172735-68172754 | MS.gene85021:intron | 45.0% | |
TACTCTGATGAGACTCCTGT+TGG | - | chr4.2:68173876-68173895 | MS.gene85021:CDS | 45.0% | |
TATCAGCTTATTTGGCCACG+TGG | - | chr4.2:68168144-68168163 | MS.gene85021:intron | 45.0% | |
TATGGCTGTGTCATACTGCA+TGG | + | chr4.2:68168700-68168719 | None:intergenic | 45.0% | |
TCCAGACAATTTCACTGTGC+TGG | - | chr4.2:68173174-68173193 | MS.gene85021:intron | 45.0% | |
TCCAGCACAGTGAAATTGTC+TGG | + | chr4.2:68173178-68173197 | None:intergenic | 45.0% | |
TCTTCAAACGACACAACTCG+AGG | + | chr4.2:68168452-68168471 | None:intergenic | 45.0% | |
TGATGAGTTAGGCACACTGT+TGG | - | chr4.2:68173363-68173382 | MS.gene85021:intron | 45.0% | |
TGCCGTTACGTGCACAATAT+TGG | - | chr4.2:68172731-68172750 | MS.gene85021:intron | 45.0% | |
TGTGGTGACAAGAGTCTCTT+TGG | - | chr4.2:68170704-68170723 | MS.gene85021:intron | 45.0% | |
TGTTCACCTCCTTAGCAGAT+CGG | + | chr4.2:68172199-68172218 | None:intergenic | 45.0% | |
TGTTCTTGCCACACTGTACA+AGG | - | chr4.2:68172779-68172798 | MS.gene85021:intron | 45.0% | |
TTACCGAATATCGGCCATGA+CGG | - | chr4.2:68171195-68171214 | MS.gene85021:intron | 45.0% | |
TTGGATAGCATGGGCAAGAA+GGG | - | chr4.2:68174523-68174542 | MS.gene85021:CDS | 45.0% | |
TTTGGATAGCATGGGCAAGA+AGG | - | chr4.2:68174522-68174541 | MS.gene85021:CDS | 45.0% | |
TTTGGCCAGGGCAGTATATA+AGG | + | chr4.2:68171400-68171419 | None:intergenic | 45.0% | |
! | ATGTAATGAGTTGGGCGAGA+GGG | - | chr4.2:68171301-68171320 | MS.gene85021:intron | 45.0% |
! | ATGTAGGTATTGCCTCTCAG+TGG | + | chr4.2:68171755-68171774 | None:intergenic | 45.0% |
! | CAACTTGTACCGATCTGCTA+AGG | - | chr4.2:68172187-68172206 | MS.gene85021:CDS | 45.0% |
! | GGCTGAGCTTTATGAATCTG+AGG | - | chr4.2:68169830-68169849 | MS.gene85021:intron | 45.0% |
! | GTTTTGCTGAAGAGTTGGGA+AGG | - | chr4.2:68168372-68168391 | MS.gene85021:intron | 45.0% |
! | TATGTAATGAGTTGGGCGAG+AGG | - | chr4.2:68171300-68171319 | MS.gene85021:intron | 45.0% |
!! | AATATGACGGTGTCACGAAG+CGG | - | chr4.2:68171275-68171294 | MS.gene85021:intron | 45.0% |
!! | CTTCAATTGGGTTGGGCATT+GGG | - | chr4.2:68171886-68171905 | MS.gene85021:CDS | 45.0% |
!! | AAAAAAATCAAAATAAAATA+AGG | + | chr4.2:68169996-68170015 | None:intergenic | 5.0% |
!!! | TTTTTTTTTTTTAGAATTTT+TGG | - | chr4.2:68169236-68169255 | MS.gene85021:intron | 5.0% |
AAAGCTGCTCAGATGCTCAG+TGG | - | chr4.2:68169864-68169883 | MS.gene85021:intron | 50.0% | |
AACGGTAGCGTTGTTGGTGT+CGG | - | chr4.2:68169472-68169491 | MS.gene85021:CDS | 50.0% | |
ACAAATCCCTGTCCACTGAG+AGG | - | chr4.2:68171740-68171759 | MS.gene85021:intron | 50.0% | |
AGCTGACGCGACACTACTAA+TGG | + | chr4.2:68168344-68168363 | None:intergenic | 50.0% | |
ATCACTTCCTAGTCCCCAAC+AGG | + | chr4.2:68173894-68173913 | None:intergenic | 50.0% | |
CCAATAACCCATATCGGAGC+CGG | + | chr4.2:68168899-68168918 | None:intergenic | 50.0% | |
CCAATGCCCAACCCAATTGA+AGG | + | chr4.2:68171888-68171907 | None:intergenic | 50.0% | |
CCCAACCCAATTGAAGGCAA+AGG | + | chr4.2:68171882-68171901 | None:intergenic | 50.0% | |
CTCTGATGAGACTCCTGTTG+GGG | - | chr4.2:68173878-68173897 | MS.gene85021:CDS | 50.0% | |
CTTGGTCATTCTGGGCAATG+AGG | + | chr4.2:68172241-68172260 | None:intergenic | 50.0% | |
GCAAGAACACGAGAACGTTG+AGG | + | chr4.2:68172768-68172787 | None:intergenic | 50.0% | |
GCACAATATTGGCAGGTGCA+GGG | - | chr4.2:68172742-68172761 | MS.gene85021:intron | 50.0% | |
GGAGAGACAAGGGAAAAGCT+GGG | + | chr4.2:68170995-68171014 | None:intergenic | 50.0% | |
GTATTGCCTCTCAGTGGACA+GGG | + | chr4.2:68171749-68171768 | None:intergenic | 50.0% | |
GTCCCTGACGTCAACTTATC+GGG | - | chr4.2:68168011-68168030 | MS.gene85021:intron | 50.0% | |
TACCCGTCATGGCCGATATT+CGG | + | chr4.2:68171201-68171220 | None:intergenic | 50.0% | |
TACCGAATATCGGCCATGAC+GGG | - | chr4.2:68171196-68171215 | MS.gene85021:intron | 50.0% | |
TCTGGAAGAAGGGCTTTCTG+TGG | + | chr4.2:68173160-68173179 | None:intergenic | 50.0% | |
TGATACAATCCTCGCGTGCA+CGG | + | chr4.2:68174393-68174412 | None:intergenic | 50.0% | |
TGCACAATATTGGCAGGTGC+AGG | - | chr4.2:68172741-68172760 | MS.gene85021:intron | 50.0% | |
TGCTGAAGAGTTGGGAAGGT+TGG | - | chr4.2:68168376-68168395 | MS.gene85021:intron | 50.0% | |
TGTTGGGGACTAGGAAGTGA+TGG | - | chr4.2:68173893-68173912 | MS.gene85021:CDS | 50.0% | |
! | CTTGTACCGATCTGCTAAGG+AGG | - | chr4.2:68172190-68172209 | MS.gene85021:CDS | 50.0% |
! | GAACGCTGCTTTCGTAAGCA+TGG | - | chr4.2:68168552-68168571 | MS.gene85021:intron | 50.0% |
! | GCTGCTTTCGTAAGCATGGT+AGG | - | chr4.2:68168556-68168575 | MS.gene85021:intron | 50.0% |
!! | CCTTCAATTGGGTTGGGCAT+TGG | - | chr4.2:68171885-68171904 | MS.gene85021:CDS | 50.0% |
AGTGTTGCACATCAGCCCTC+GGG | - | chr4.2:68169093-68169112 | MS.gene85021:intron | 55.0% | |
ATGCATGTCCGGCTCCGATA+TGG | - | chr4.2:68168888-68168907 | MS.gene85021:intron | 55.0% | |
CAGTGTTGCACATCAGCCCT+CGG | - | chr4.2:68169092-68169111 | MS.gene85021:intron | 55.0% | |
GACAAGGGAAAAGCTGGGAG+AGG | + | chr4.2:68170990-68171009 | None:intergenic | 55.0% | |
GATACAATCCTCGCGTGCAC+GGG | + | chr4.2:68174392-68174411 | None:intergenic | 55.0% | |
GCACGGGTGCCCATAAACAA+GGG | + | chr4.2:68174376-68174395 | None:intergenic | 55.0% | |
GCTTATTTGGCCACGTGGCA+TGG | - | chr4.2:68168149-68168168 | MS.gene85021:intron | 55.0% | |
GGGAGAGACAAGGGAAAAGC+TGG | + | chr4.2:68170996-68171015 | None:intergenic | 55.0% | |
GGTATTGCCTCTCAGTGGAC+AGG | + | chr4.2:68171750-68171769 | None:intergenic | 55.0% | |
GTTGCAAAGATGGGACCAGC+AGG | - | chr4.2:68173979-68173998 | MS.gene85021:intron | 55.0% | |
GTTGGGAATTCCACCTCCCA+AGG | - | chr4.2:68173381-68173400 | MS.gene85021:intron | 55.0% | |
TCAGCAGGATTTCCCTCCTC+AGG | + | chr4.2:68173659-68173678 | None:intergenic | 55.0% | |
TGAGACTCCTGTTGGGGACT+AGG | - | chr4.2:68173884-68173903 | MS.gene85021:CDS | 55.0% | |
TGCACGGGTGCCCATAAACA+AGG | + | chr4.2:68174377-68174396 | None:intergenic | 55.0% | |
TGCATGTCCGGCTCCGATAT+GGG | - | chr4.2:68168889-68168908 | MS.gene85021:intron | 55.0% | |
TTACCGGTAACCATGCCACG+TGG | + | chr4.2:68168162-68168181 | None:intergenic | 55.0% | |
TTGCGGACAGATACCCGTCA+TGG | + | chr4.2:68171212-68171231 | None:intergenic | 55.0% | |
! | CCGGCTCCGATATGGGTTAT+TGG | - | chr4.2:68168896-68168915 | MS.gene85021:intron | 55.0% |
! | GGCCCGATAAGTTGACGTCA+GGG | + | chr4.2:68168016-68168035 | None:intergenic | 55.0% |
! | TGGCCCGATAAGTTGACGTC+AGG | + | chr4.2:68168017-68168036 | None:intergenic | 55.0% |
!! | AATTGGGTTGGGCATTGGGC+AGG | - | chr4.2:68171890-68171909 | MS.gene85021:CDS | 55.0% |
AGAGTTTCACGTGTCCCCCG+AGG | + | chr4.2:68169112-68169131 | None:intergenic | 60.0% | |
GAGTTTCACGTGTCCCCCGA+GGG | + | chr4.2:68169111-68169130 | None:intergenic | 60.0% | |
GTGTTGCACATCAGCCCTCG+GGG | - | chr4.2:68169094-68169113 | MS.gene85021:intron | 60.0% | |
TGGCCACGTGGCATGGTTAC+CGG | - | chr4.2:68168156-68168175 | MS.gene85021:intron | 60.0% | |
TGTTGCACATCAGCCCTCGG+GGG | - | chr4.2:68169095-68169114 | MS.gene85021:intron | 60.0% | |
! | TGAGTTGGGCGAGAGGGATG+AGG | - | chr4.2:68171307-68171326 | MS.gene85021:intron | 60.0% |
GGGCGAGAGGGATGAGGCTT+TGG | - | chr4.2:68171313-68171332 | MS.gene85021:intron | 65.0% | |
TATGGGCACCCGTGCACGCG+AGG | - | chr4.2:68174381-68174400 | MS.gene85021:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 68167683 | 68174564 | 68167683 | ID=MS.gene85021 |
chr4.2 | mRNA | 68167683 | 68174564 | 68167683 | ID=MS.gene85021.t1;Parent=MS.gene85021 |
chr4.2 | exon | 68174435 | 68174564 | 68174435 | ID=MS.gene85021.t1.exon1;Parent=MS.gene85021.t1 |
chr4.2 | CDS | 68174435 | 68174564 | 68174435 | ID=cds.MS.gene85021.t1;Parent=MS.gene85021.t1 |
chr4.2 | exon | 68173772 | 68173923 | 68173772 | ID=MS.gene85021.t1.exon2;Parent=MS.gene85021.t1 |
chr4.2 | CDS | 68173772 | 68173923 | 68173772 | ID=cds.MS.gene85021.t1;Parent=MS.gene85021.t1 |
chr4.2 | exon | 68172337 | 68172440 | 68172337 | ID=MS.gene85021.t1.exon3;Parent=MS.gene85021.t1 |
chr4.2 | CDS | 68172337 | 68172440 | 68172337 | ID=cds.MS.gene85021.t1;Parent=MS.gene85021.t1 |
chr4.2 | exon | 68172166 | 68172226 | 68172166 | ID=MS.gene85021.t1.exon4;Parent=MS.gene85021.t1 |
chr4.2 | CDS | 68172166 | 68172226 | 68172166 | ID=cds.MS.gene85021.t1;Parent=MS.gene85021.t1 |
chr4.2 | exon | 68171834 | 68171926 | 68171834 | ID=MS.gene85021.t1.exon5;Parent=MS.gene85021.t1 |
chr4.2 | CDS | 68171834 | 68171926 | 68171834 | ID=cds.MS.gene85021.t1;Parent=MS.gene85021.t1 |
chr4.2 | exon | 68171638 | 68171738 | 68171638 | ID=MS.gene85021.t1.exon6;Parent=MS.gene85021.t1 |
chr4.2 | CDS | 68171638 | 68171738 | 68171638 | ID=cds.MS.gene85021.t1;Parent=MS.gene85021.t1 |
chr4.2 | exon | 68169447 | 68169555 | 68169447 | ID=MS.gene85021.t1.exon7;Parent=MS.gene85021.t1 |
chr4.2 | CDS | 68169447 | 68169555 | 68169447 | ID=cds.MS.gene85021.t1;Parent=MS.gene85021.t1 |
chr4.2 | exon | 68169318 | 68169362 | 68169318 | ID=MS.gene85021.t1.exon8;Parent=MS.gene85021.t1 |
chr4.2 | CDS | 68169318 | 68169362 | 68169318 | ID=cds.MS.gene85021.t1;Parent=MS.gene85021.t1 |
chr4.2 | exon | 68169161 | 68169229 | 68169161 | ID=MS.gene85021.t1.exon9;Parent=MS.gene85021.t1 |
chr4.2 | CDS | 68169161 | 68169229 | 68169161 | ID=cds.MS.gene85021.t1;Parent=MS.gene85021.t1 |
chr4.2 | exon | 68168993 | 68169084 | 68168993 | ID=MS.gene85021.t1.exon10;Parent=MS.gene85021.t1 |
chr4.2 | CDS | 68168993 | 68169084 | 68168993 | ID=cds.MS.gene85021.t1;Parent=MS.gene85021.t1 |
chr4.2 | exon | 68168845 | 68168887 | 68168845 | ID=MS.gene85021.t1.exon11;Parent=MS.gene85021.t1 |
chr4.2 | CDS | 68168845 | 68168887 | 68168845 | ID=cds.MS.gene85021.t1;Parent=MS.gene85021.t1 |
chr4.2 | exon | 68168416 | 68168475 | 68168416 | ID=MS.gene85021.t1.exon12;Parent=MS.gene85021.t1 |
chr4.2 | CDS | 68168416 | 68168475 | 68168416 | ID=cds.MS.gene85021.t1;Parent=MS.gene85021.t1 |
chr4.2 | exon | 68168247 | 68168306 | 68168247 | ID=MS.gene85021.t1.exon13;Parent=MS.gene85021.t1 |
chr4.2 | CDS | 68168247 | 68168306 | 68168247 | ID=cds.MS.gene85021.t1;Parent=MS.gene85021.t1 |
chr4.2 | exon | 68167683 | 68167757 | 68167683 | ID=MS.gene85021.t1.exon14;Parent=MS.gene85021.t1 |
chr4.2 | CDS | 68167683 | 68167757 | 68167683 | ID=cds.MS.gene85021.t1;Parent=MS.gene85021.t1 |
Gene Sequence |
Protein sequence |