Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37293.t1 | RHN50194.1 | 97.9 | 381 | 8 | 0 | 1 | 381 | 1 | 381 | 5.30E-208 | 733.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37293.t1 | Q54KZ8 | 36.1 | 332 | 200 | 7 | 56 | 381 | 50 | 375 | 7.6e-54 | 212.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37293.t1 | A0A396HEF3 | 97.9 | 381 | 8 | 0 | 1 | 381 | 1 | 381 | 3.8e-208 | 733.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05190 | MS.gene37293 | 0.842978 | 1.86E-58 | -1.69E-46 |
| MS.gene057052 | MS.gene37293 | 0.802168 | 6.38E-49 | -1.69E-46 |
| MS.gene057094 | MS.gene37293 | 0.809715 | 1.65E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene057321 | MS.gene37293 | PPI |
| MS.gene37293 | MS.gene80792 | PPI |
| MS.gene017884 | MS.gene37293 | PPI |
| MS.gene031997 | MS.gene37293 | PPI |
| MS.gene80663 | MS.gene37293 | PPI |
| MS.gene37293 | MS.gene014112 | PPI |
| MS.gene56673 | MS.gene37293 | PPI |
| MS.gene018310 | MS.gene37293 | PPI |
| MS.gene39043 | MS.gene37293 | PPI |
| MS.gene29609 | MS.gene37293 | PPI |
| MS.gene37293 | MS.gene85021 | PPI |
| MS.gene37293 | MS.gene86150 | PPI |
| MS.gene77710 | MS.gene37293 | PPI |
| MS.gene42526 | MS.gene37293 | PPI |
| MS.gene014112 | MS.gene37293 | PPI |
| MS.gene018309 | MS.gene37293 | PPI |
| MS.gene37293 | MS.gene045655 | PPI |
| MS.gene008080 | MS.gene37293 | PPI |
| MS.gene37293 | MS.gene69249 | PPI |
| MS.gene72510 | MS.gene37293 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37293.t1 | MTR_6g015395 | 97.375 | 381 | 10 | 0 | 1 | 381 | 1 | 381 | 0.0 | 771 |
| MS.gene37293.t1 | MTR_7g091480 | 97.638 | 381 | 9 | 0 | 1 | 381 | 1 | 381 | 0.0 | 770 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37293.t1 | AT5G15610 | 68.766 | 381 | 119 | 0 | 1 | 381 | 1 | 381 | 0.0 | 561 |
| MS.gene37293.t1 | AT3G02200 | 66.404 | 381 | 128 | 0 | 1 | 381 | 1 | 381 | 0.0 | 548 |
| MS.gene37293.t1 | AT5G15610 | 63.902 | 410 | 119 | 1 | 1 | 381 | 1 | 410 | 0.0 | 544 |
| MS.gene37293.t1 | AT3G02200 | 66.574 | 359 | 120 | 0 | 1 | 359 | 1 | 359 | 0.0 | 512 |
Find 71 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATTCCTTATGAACTTATT+AGG | 0.125836 | 6.1:-76617100 | MS.gene37293:CDS |
| TTCTTGAAAGAGTGGAAAAT+TGG | 0.210478 | 6.1:-76618721 | MS.gene37293:CDS |
| TAATAAGTTCATAAGGAATT+TGG | 0.226927 | 6.1:+76617102 | None:intergenic |
| CTGATATAACAGACCATATT+TGG | 0.228059 | 6.1:+76617382 | None:intergenic |
| GAAGGCACCTGACGTATTTC+AGG | 0.250708 | 6.1:-76618317 | MS.gene37293:intron |
| CTACATGAAGGCATTGAATT+TGG | 0.253476 | 6.1:-76618800 | MS.gene37293:CDS |
| CATGTTGCAGTGTGATTTAC+TGG | 0.258669 | 6.1:-76617438 | MS.gene37293:intron |
| GATCAATTTGTATAATCTTT+TGG | 0.267985 | 6.1:-76618848 | MS.gene37293:CDS |
| GATTCGCCTCTGAGCTTGCC+TGG | 0.291138 | 6.1:-76622070 | MS.gene37293:CDS |
| AATTCCTTATGAACTTATTA+GGG | 0.303697 | 6.1:-76617099 | MS.gene37293:CDS |
| TCCACCTTATTGAATGACTA+TGG | 0.328479 | 6.1:-76617299 | MS.gene37293:intron |
| CAAGGACAACTTGATTCATT+TGG | 0.340745 | 6.1:+76616919 | None:intergenic |
| ACAATCTCCATGACTTCATC+TGG | 0.341158 | 6.1:+76619026 | None:intergenic |
| CATGCCTGCTGTTGGGCAAC+TGG | 0.343731 | 6.1:-76617414 | MS.gene37293:CDS |
| TTTACCATAGTCATTCAATA+AGG | 0.369504 | 6.1:+76617295 | None:intergenic |
| TGAATCAAGTTGTCCTTGTT+AGG | 0.370330 | 6.1:-76616914 | MS.gene37293:intron |
| GAGCTTGCCTGGGCTGATGC+TGG | 0.382511 | 6.1:-76622059 | MS.gene37293:CDS |
| ATGATGATGAAGTTGAACTA+TGG | 0.393896 | 6.1:-76616986 | MS.gene37293:CDS |
| GCATTGAATTTGGCTGTTGA+TGG | 0.394749 | 6.1:-76618790 | MS.gene37293:CDS |
| ACTTATTAGGGACACACTTC+AGG | 0.395673 | 6.1:-76617087 | MS.gene37293:intron |
| TAGACATAAAACTGGCAGTA+TGG | 0.404837 | 6.1:+76618820 | None:intergenic |
| TACTGGACATGCCTGCTGTT+GGG | 0.410514 | 6.1:-76617421 | MS.gene37293:CDS |
| TCAAGTTAGCAGACTTTGCT+TGG | 0.414784 | 6.1:-76620562 | MS.gene37293:CDS |
| CATCACACTGATCGGGTGTT+TGG | 0.417804 | 6.1:-76616743 | MS.gene37293:CDS |
| CTGGAGAATGATGCCAAATA+TGG | 0.429289 | 6.1:-76617395 | MS.gene37293:CDS |
| GGAAAGAGCGGCGTCTTCTT+CGG | 0.432130 | 6.1:+76622100 | None:intergenic |
| CCTTCATGTAGACATAAAAC+TGG | 0.439865 | 6.1:+76618812 | None:intergenic |
| GGCTGAAGAATTCATTGCTA+TGG | 0.447568 | 6.1:-76620538 | MS.gene37293:CDS |
| AGAAACAGCTCTCTATGTTC+TGG | 0.452737 | 6.1:+76618694 | None:intergenic |
| GATCTCAGCTCTGATGGATC+TGG | 0.452853 | 6.1:-76617125 | MS.gene37293:CDS |
| GGGTGTTTGGTCAGCATCAA+TGG | 0.455622 | 6.1:-76616730 | MS.gene37293:CDS |
| TTGGTTGATCTCAGCTCTGA+TGG | 0.460760 | 6.1:-76617131 | MS.gene37293:CDS |
| TCTTGAAAGAGTGGAAAATT+GGG | 0.466987 | 6.1:-76618720 | MS.gene37293:CDS |
| ATTCGCCTCTGAGCTTGCCT+GGG | 0.468400 | 6.1:-76622069 | MS.gene37293:CDS |
| CATTGCTATGGGAAAGTGGT+TGG | 0.477727 | 6.1:-76620526 | MS.gene37293:CDS |
| ATTGCAGATAATAGTGAAGA+TGG | 0.482900 | 6.1:+76619070 | None:intergenic |
| AGGCAAGCTCAGAGGCGAAT+CGG | 0.484064 | 6.1:+76622072 | None:intergenic |
| GTGTCCCTAATAAGTTCATA+AGG | 0.487262 | 6.1:+76617095 | None:intergenic |
| TTACTGGACATGCCTGCTGT+TGG | 0.496081 | 6.1:-76617422 | MS.gene37293:CDS |
| TTCTCCAGTTGCCCAACAGC+AGG | 0.499064 | 6.1:+76617410 | None:intergenic |
| TACATCTTCAATCGCACCGC+AGG | 0.502707 | 6.1:+76618960 | None:intergenic |
| CAATGCATTCTTCATGCACA+AGG | 0.504463 | 6.1:+76617174 | None:intergenic |
| TTCCTTCAAAACATTAGAGA+TGG | 0.510695 | 6.1:+76618669 | None:intergenic |
| CTCGGGACCAGCATCAGCCC+AGG | 0.516732 | 6.1:+76622052 | None:intergenic |
| GCGGCGTCTTCTTCGGAAGT+AGG | 0.526498 | 6.1:+76622107 | None:intergenic |
| GAACAAAGCTAGTGACTTGG+AGG | 0.528393 | 6.1:-76616697 | MS.gene37293:CDS |
| TGTGCAGTCATCACACTGAT+CGG | 0.531347 | 6.1:-76616751 | MS.gene37293:intron |
| AGTAGGAACCACCGTCGTCA+TGG | 0.531600 | 6.1:+76622124 | None:intergenic |
| AATTCATTGCTATGGGAAAG+TGG | 0.536465 | 6.1:-76620530 | MS.gene37293:CDS |
| GTGCAGTCATCACACTGATC+GGG | 0.542885 | 6.1:-76616750 | MS.gene37293:intron |
| ACCATAGTCATTCAATAAGG+TGG | 0.547992 | 6.1:+76617298 | None:intergenic |
| GCTGAAGAATTCATTGCTAT+GGG | 0.548812 | 6.1:-76620537 | MS.gene37293:CDS |
| CAAGTTACCTGAAATACGTC+AGG | 0.554665 | 6.1:+76618310 | None:intergenic |
| TGAGAATCCAGATGAAGTCA+TGG | 0.556784 | 6.1:-76619033 | MS.gene37293:CDS |
| AGTTAGCAGACTTTGCTTGG+AGG | 0.561124 | 6.1:-76620559 | MS.gene37293:CDS |
| AAAGTTAATTGACTGTAAGA+TGG | 0.565834 | 6.1:-76616943 | MS.gene37293:CDS |
| TCGATAGCTTCTTGAAAGAG+TGG | 0.566129 | 6.1:-76618729 | MS.gene37293:CDS |
| TGATGATGAAGTTGAACTAT+GGG | 0.573567 | 6.1:-76616985 | MS.gene37293:CDS |
| TATGGGAAAGTGGTTGGAGC+TGG | 0.579039 | 6.1:-76620520 | MS.gene37293:CDS |
| CTGGGCTGATGCTGGTCCCG+AGG | 0.590869 | 6.1:-76622051 | MS.gene37293:intron |
| TGAGAACAAAGCTAGTGACT+TGG | 0.607952 | 6.1:-76616700 | MS.gene37293:CDS |
| AAGCAAAGTCTGCTAACTTG+AGG | 0.611744 | 6.1:+76620564 | None:intergenic |
| ATCAGCCCAGGCAAGCTCAG+AGG | 0.615538 | 6.1:+76622064 | None:intergenic |
| GAGATGCAACATACCTAACA+AGG | 0.623749 | 6.1:+76616901 | None:intergenic |
| CTCAGAGGCGAATCGGACAA+CGG | 0.624823 | 6.1:+76622079 | None:intergenic |
| GAATCGGACAACGGAAAGAG+CGG | 0.648134 | 6.1:+76622088 | None:intergenic |
| AAGTAGCAAGATAATTGGTG+AGG | 0.654137 | 6.1:+76618410 | None:intergenic |
| CGCACAAACAACCATGACGA+CGG | 0.654703 | 6.1:-76622135 | None:intergenic |
| AACAAAGCTAGTGACTTGGA+GGG | 0.674755 | 6.1:-76616696 | None:intergenic |
| GCAGCCAAATGAAAAGCCTG+CGG | 0.678328 | 6.1:-76618976 | MS.gene37293:CDS |
| ACAAACAACCATGACGACGG+TGG | 0.690644 | 6.1:-76622132 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+AGG | + | chr6.1:76618606-76618587 | None:intergenic | 0.0% |
| !! | ATATAATTTATAGATTCAAT+TGG | - | chr6.1:76617087-76617106 | MS.gene37293:intron | 10.0% |
| !! | ATATATATATATATATGAGA+AGG | - | chr6.1:76618623-76618642 | MS.gene37293:intron | 10.0% |
| !! | TATATATATATATATGAGAA+GGG | - | chr6.1:76618624-76618643 | MS.gene37293:intron | 10.0% |
| !! | TTAATTACTAATAATACATA+TGG | - | chr6.1:76618726-76618745 | MS.gene37293:CDS | 10.0% |
| !!! | CTTTCTTTTAAATAAAATTA+AGG | - | chr6.1:76617375-76617394 | MS.gene37293:CDS | 10.0% |
| !!! | TTTATCTTAATCTTTAAAAT+CGG | - | chr6.1:76621155-76621174 | MS.gene37293:intron | 10.0% |
| !!! | TTTTTTAATTTGATTGTTTT+TGG | - | chr6.1:76617249-76617268 | MS.gene37293:intron | 10.0% |
| !! | ATTAATTAGAAATAATTCCT+AGG | + | chr6.1:76619185-76619204 | None:intergenic | 15.0% |
| !! | ATTATTTCATCAAAACATTT+AGG | + | chr6.1:76621615-76621634 | None:intergenic | 15.0% |
| !! | TCTATATAATTGATTGTAAA+TGG | - | chr6.1:76617218-76617237 | MS.gene37293:intron | 15.0% |
| !! | TGAATTTATTAGTATTATCT+TGG | - | chr6.1:76618215-76618234 | MS.gene37293:intron | 15.0% |
| !!! | AACTTGTATTTTATATACTT+TGG | - | chr6.1:76620750-76620769 | MS.gene37293:intron | 15.0% |
| !!! | AATATCAATTTTTCTCTTAT+AGG | - | chr6.1:76620716-76620735 | MS.gene37293:intron | 15.0% |
| !!! | ATCTCTTTTTTTTTTTTTGA+GGG | - | chr6.1:76618457-76618476 | MS.gene37293:intron | 15.0% |
| !!! | TATCTCTTTTTTTTTTTTTG+AGG | - | chr6.1:76618456-76618475 | MS.gene37293:intron | 15.0% |
| !!! | TTTTTAAATTAATACCTTCT+AGG | + | chr6.1:76618812-76618831 | None:intergenic | 15.0% |
| !! | AAACATAATATCTTCTCAAA+AGG | - | chr6.1:76620614-76620633 | MS.gene37293:intron | 20.0% |
| !! | AAATTCCTTATGAACTTATT+AGG | - | chr6.1:76621719-76621738 | MS.gene37293:intron | 20.0% |
| !! | AATAACAGATATTGTAAACA+CGG | + | chr6.1:76619709-76619728 | None:intergenic | 20.0% |
| !! | AATAACTATGATTGAATGTA+GGG | + | chr6.1:76620581-76620600 | None:intergenic | 20.0% |
| !! | AATTCCTTATGAACTTATTA+GGG | - | chr6.1:76621720-76621739 | MS.gene37293:intron | 20.0% |
| !! | AATTTATAGATTCAATTGGA+AGG | - | chr6.1:76617091-76617110 | MS.gene37293:CDS | 20.0% |
| !! | ATAATTGATTGTAAATGGTT+TGG | - | chr6.1:76617223-76617242 | MS.gene37293:intron | 20.0% |
| !! | GTGTTGTATATAAATGAAAT+TGG | - | chr6.1:76616893-76616912 | MS.gene37293:intron | 20.0% |
| !! | TAATAACTATGATTGAATGT+AGG | + | chr6.1:76620582-76620601 | None:intergenic | 20.0% |
| !! | TAATAAGTTCATAAGGAATT+TGG | + | chr6.1:76621720-76621739 | None:intergenic | 20.0% |
| !! | TACTAATAATACATATGGTA+AGG | - | chr6.1:76618731-76618750 | MS.gene37293:CDS | 20.0% |
| !! | TTAGTATTATTCAAATTCTG+AGG | - | chr6.1:76621246-76621265 | MS.gene37293:intron | 20.0% |
| !!! | AACCTAAAAAATTATCGATT+TGG | + | chr6.1:76616812-76616831 | None:intergenic | 20.0% |
| !!! | AATGGGCTTTTATTTTTTTT+GGG | - | chr6.1:76618024-76618043 | MS.gene37293:intron | 20.0% |
| !!! | ACCTAAAAAATTATCGATTT+GGG | + | chr6.1:76616811-76616830 | None:intergenic | 20.0% |
| !!! | AGTTTCTCTTATAATTTTCT+AGG | + | chr6.1:76617814-76617833 | None:intergenic | 20.0% |
| !!! | ATTATGAGTGATGAATTTTT+GGG | - | chr6.1:76619673-76619692 | MS.gene37293:intron | 20.0% |
| !!! | ATTTTGTTTTTACTTCTCTT+TGG | - | chr6.1:76620222-76620241 | MS.gene37293:intron | 20.0% |
| !!! | GATCAATTTGTATAATCTTT+TGG | - | chr6.1:76619971-76619990 | MS.gene37293:intron | 20.0% |
| !!! | TAGTATTATCTTGGTTTTTT+AGG | - | chr6.1:76618224-76618243 | MS.gene37293:intron | 20.0% |
| !!! | TATTATGAGTGATGAATTTT+TGG | - | chr6.1:76619672-76619691 | MS.gene37293:intron | 20.0% |
| !!! | TTCTCAAAAATTTCTGAAAA+AGG | - | chr6.1:76618354-76618373 | MS.gene37293:CDS | 20.0% |
| !!! | TTGATGAAATAATGTTGTTT+AGG | - | chr6.1:76621622-76621641 | MS.gene37293:intron | 20.0% |
| !!! | TTTTTTCCTTCATTTTTTGT+GGG | - | chr6.1:76617173-76617192 | MS.gene37293:CDS | 20.0% |
| !!! | TTTTTTTCCTTCATTTTTTG+TGG | - | chr6.1:76617172-76617191 | MS.gene37293:CDS | 20.0% |
| ! | AAAAATGAGATTGATGTCAT+TGG | - | chr6.1:76621669-76621688 | MS.gene37293:intron | 25.0% |
| ! | AAAGTTAATTGACTGTAAGA+TGG | - | chr6.1:76621876-76621895 | MS.gene37293:intron | 25.0% |
| ! | AAGAATTAATGGTCAAGATT+TGG | - | chr6.1:76619224-76619243 | MS.gene37293:intron | 25.0% |
| ! | AAGAATTAATGGTCAAGATT+TGG | + | chr6.1:76619243-76619224 | None:intergenic | 25.0% |
| ! | AGAAAAAGTAGCAAGATAAT+TGG | + | chr6.1:76620417-76620436 | None:intergenic | 25.0% |
| ! | ATAACTATGATTGAATGTAG+GGG | + | chr6.1:76620580-76620599 | None:intergenic | 25.0% |
| ! | ATATATATATATAGGACAGC+TGG | + | chr6.1:76618579-76618598 | None:intergenic | 25.0% |
| ! | ATCCTAATTCTTTGATGTTA+TGG | - | chr6.1:76618983-76619002 | MS.gene37293:CDS | 25.0% |
| ! | ATCTAATTGTCAGATTCAAT+TGG | - | chr6.1:76617417-76617436 | MS.gene37293:CDS | 25.0% |
| ! | ATGTAATATTACATCCTACT+TGG | - | chr6.1:76619877-76619896 | MS.gene37293:intron | 25.0% |
| ! | ATGTTTCACAGATAATTGAT+TGG | - | chr6.1:76619644-76619663 | MS.gene37293:intron | 25.0% |
| ! | CAACATAAGTTTATTGTCAT+CGG | - | chr6.1:76620261-76620280 | MS.gene37293:intron | 25.0% |
| ! | CACCAAAACAATCAAAAAAA+TGG | + | chr6.1:76620781-76620800 | None:intergenic | 25.0% |
| ! | GAAATGATACAACAGTAATT+GGG | - | chr6.1:76617446-76617465 | MS.gene37293:intron | 25.0% |
| ! | TCAAAATTTCAAAACCAAGT+AGG | + | chr6.1:76619894-76619913 | None:intergenic | 25.0% |
| ! | TCATAATTCATTGATGTTGA+AGG | - | chr6.1:76619045-76619064 | MS.gene37293:CDS | 25.0% |
| ! | TGAAATGATACAACAGTAAT+TGG | - | chr6.1:76617445-76617464 | MS.gene37293:intron | 25.0% |
| ! | TGATATTACAAGATGATAGA+CGG | + | chr6.1:76620703-76620722 | None:intergenic | 25.0% |
| ! | TTAACAAAATTAAGACAGCT+TGG | + | chr6.1:76618435-76618454 | None:intergenic | 25.0% |
| ! | TTATCTGTGAAACATCAAAT+TGG | + | chr6.1:76619639-76619658 | None:intergenic | 25.0% |
| ! | TTTACCATAGTCATTCAATA+AGG | + | chr6.1:76621527-76621546 | None:intergenic | 25.0% |
| !! | ATTTTCTGAACATCTCAAAT+TGG | + | chr6.1:76617064-76617083 | None:intergenic | 25.0% |
| !! | CAAAAATTTCTGAAAAAGGT+AGG | - | chr6.1:76618358-76618377 | MS.gene37293:CDS | 25.0% |
| !! | GAATTGATGTTATTTGTGAA+CGG | - | chr6.1:76618152-76618171 | MS.gene37293:intron | 25.0% |
| !! | TCTTTTTAAACGATTGAGAA+TGG | - | chr6.1:76618870-76618889 | MS.gene37293:intron | 25.0% |
| !! | TTGAAAATGATTTTGCAACT+CGG | + | chr6.1:76620845-76620864 | None:intergenic | 25.0% |
| !! | TTGTTGATAGATTCAATTGA+AGG | - | chr6.1:76617948-76617967 | MS.gene37293:intron | 25.0% |
| !!! | AAAAATTATCGATTTGGGAA+TGG | + | chr6.1:76616806-76616825 | None:intergenic | 25.0% |
| !!! | AAAATTATCGATTTGGGAAT+GGG | + | chr6.1:76616805-76616824 | None:intergenic | 25.0% |
| !!! | AATTATCTTGCTACTTTTTC+TGG | - | chr6.1:76620416-76620435 | MS.gene37293:intron | 25.0% |
| !!! | AATTTGATTGTTTTTGGTGT+TGG | - | chr6.1:76617255-76617274 | MS.gene37293:intron | 25.0% |
| !!! | ATGTTTTGAAGGAAAACAAA+AGG | - | chr6.1:76620159-76620178 | MS.gene37293:intron | 25.0% |
| !!! | CTTTTATTTTTTTTGGGTTG+GGG | - | chr6.1:76618030-76618049 | MS.gene37293:intron | 25.0% |
| !!! | GAATGGGCTTTTATTTTTTT+TGG | - | chr6.1:76618023-76618042 | MS.gene37293:intron | 25.0% |
| !!! | GCTTTTATTTTTTTTGGGTT+GGG | - | chr6.1:76618029-76618048 | MS.gene37293:intron | 25.0% |
| !!! | TCCCAAATCGATAATTTTTT+AGG | - | chr6.1:76616807-76616826 | MS.gene37293:intron | 25.0% |
| !!! | TGCCATTTTTTTGATTGTTT+TGG | - | chr6.1:76620776-76620795 | MS.gene37293:intron | 25.0% |
| !!! | TTTTAGGTTTTCGTGATTTT+GGG | - | chr6.1:76616823-76616842 | MS.gene37293:intron | 25.0% |
| !!! | TTTTATTTTTTTTGGGTTGG+GGG | - | chr6.1:76618031-76618050 | MS.gene37293:intron | 25.0% |
| !!! | TTTTGAGAAAATCAATTCAG+CGG | + | chr6.1:76618343-76618362 | None:intergenic | 25.0% |
| !!! | TTTTTAGGTTTTCGTGATTT+TGG | - | chr6.1:76616822-76616841 | MS.gene37293:intron | 25.0% |
| !!! | TTTTTCCTTCATTTTTTGTG+GGG | - | chr6.1:76617174-76617193 | MS.gene37293:CDS | 25.0% |
| AAACAATTACCTCTTGTTCA+TGG | - | chr6.1:76618925-76618944 | MS.gene37293:intron | 30.0% | |
| AAAGTCTTAACCTACTAAGT+GGG | + | chr6.1:76617924-76617943 | None:intergenic | 30.0% | |
| AAATACTGTTCATGCACAAT+TGG | - | chr6.1:76621544-76621563 | MS.gene37293:intron | 30.0% | |
| AACAGTAATTGGGTTTAGAA+TGG | - | chr6.1:76617456-76617475 | MS.gene37293:intron | 30.0% | |
| AATTGTCAGATTCAATTGGA+AGG | - | chr6.1:76617421-76617440 | MS.gene37293:CDS | 30.0% | |
| AGATTCAGAGATTAATGAGT+TGG | - | chr6.1:76617842-76617861 | MS.gene37293:intron | 30.0% | |
| ATTCATTGATGTTGAAGGAA+TGG | - | chr6.1:76619050-76619069 | MS.gene37293:CDS | 30.0% | |
| ATTGCAGATAATAGTGAAGA+TGG | + | chr6.1:76619752-76619771 | None:intergenic | 30.0% | |
| CAATTGTTACTGAATGCAAA+GGG | + | chr6.1:76619382-76619401 | None:intergenic | 30.0% | |
| CAGAACTGGATAATAAATTC+TGG | + | chr6.1:76619488-76619507 | None:intergenic | 30.0% | |
| CCTCAAGTTTAAACCTAATA+GGG | - | chr6.1:76618786-76618805 | MS.gene37293:CDS | 30.0% | |
| CTCATTAATCTCTGAATCTT+TGG | + | chr6.1:76617841-76617860 | None:intergenic | 30.0% | |
| CTCCATAACATCAAAGAATT+AGG | + | chr6.1:76618988-76619007 | None:intergenic | 30.0% | |
| CTGATATAACAGACCATATT+TGG | + | chr6.1:76621440-76621459 | None:intergenic | 30.0% | |
| CTTGGTCTATATCTCTAATA+TGG | + | chr6.1:76618417-76618436 | None:intergenic | 30.0% | |
| TATAGATTCAATTGGAAGGT+TGG | - | chr6.1:76617095-76617114 | MS.gene37293:CDS | 30.0% | |
| TATCTTCTCAAAAGGTGATA+AGG | - | chr6.1:76620622-76620641 | MS.gene37293:intron | 30.0% | |
| TCAATTGTTACTGAATGCAA+AGG | + | chr6.1:76619383-76619402 | None:intergenic | 30.0% | |
| TCATCATCATTGATCTGAAA+GGG | + | chr6.1:76621823-76621842 | None:intergenic | 30.0% | |
| TCCTCAAGTTTAAACCTAAT+AGG | - | chr6.1:76618785-76618804 | MS.gene37293:CDS | 30.0% | |
| TCTTGAAAGAGTGGAAAATT+GGG | - | chr6.1:76620099-76620118 | MS.gene37293:intron | 30.0% | |
| TGAAAATTGTGCTTGTGATA+TGG | - | chr6.1:76616972-76616991 | MS.gene37293:CDS | 30.0% | |
| TGATAGATTCAATTGAAGGT+TGG | - | chr6.1:76617952-76617971 | MS.gene37293:intron | 30.0% | |
| TTCATCATCATTGATCTGAA+AGG | + | chr6.1:76621824-76621843 | None:intergenic | 30.0% | |
| TTCATTGATGTTGAAGGAAT+GGG | - | chr6.1:76619051-76619070 | MS.gene37293:CDS | 30.0% | |
| TTCCTTCAAAACATTAGAGA+TGG | + | chr6.1:76620153-76620172 | None:intergenic | 30.0% | |
| TTCTTGAAAGAGTGGAAAAT+TGG | - | chr6.1:76620098-76620117 | MS.gene37293:intron | 30.0% | |
| TTTGCATTCAGTAACAATTG+AGG | - | chr6.1:76619382-76619401 | MS.gene37293:intron | 30.0% | |
| ! | ATGATGATGAAGTTGAACTA+TGG | - | chr6.1:76621833-76621852 | MS.gene37293:intron | 30.0% |
| ! | ATTATCCAGTTCTGATAGTT+TGG | - | chr6.1:76619494-76619513 | MS.gene37293:intron | 30.0% |
| ! | CAATTTTTCTCTTATAGGCA+TGG | - | chr6.1:76620721-76620740 | MS.gene37293:intron | 30.0% |
| ! | CTATCGATCTTTTTGAATGA+AGG | + | chr6.1:76620077-76620096 | None:intergenic | 30.0% |
| ! | TCAAGATTTTTCTTACTCAG+AGG | - | chr6.1:76621464-76621483 | MS.gene37293:intron | 30.0% |
| ! | TGATGATGAAGTTGAACTAT+GGG | - | chr6.1:76621834-76621853 | MS.gene37293:intron | 30.0% |
| ! | TTTTTATCTCAGCATGTCAA+AGG | - | chr6.1:76620373-76620392 | MS.gene37293:intron | 30.0% |
| !! | AATCTTTAAAATCGGCAAGT+GGG | - | chr6.1:76621163-76621182 | MS.gene37293:intron | 30.0% |
| !! | TAATCTTTAAAATCGGCAAG+TGG | - | chr6.1:76621162-76621181 | MS.gene37293:intron | 30.0% |
| !! | TTGTATTTTTGCTGAATGTG+TGG | - | chr6.1:76617600-76617619 | MS.gene37293:intron | 30.0% |
| !! | TTTAGGTTTTCGTGATTTTG+GGG | - | chr6.1:76616824-76616843 | MS.gene37293:intron | 30.0% |
| !!! | GGCTTTTATTTTTTTTGGGT+TGG | - | chr6.1:76618028-76618047 | MS.gene37293:intron | 30.0% |
| !!! | TAACTCTTTTGAGTTACTCT+TGG | - | chr6.1:76619249-76619268 | MS.gene37293:intron | 30.0% |
| !!! | TAACTCTTTTGAGTTACTCT+TGG | + | chr6.1:76619268-76619249 | None:intergenic | 30.0% |
| !!! | TGCAATTGTTGATTTTGTGA+AGG | - | chr6.1:76620484-76620503 | MS.gene37293:CDS | 30.0% |
| !!! | TGGGTTGGAATTTTTTGAAT+GGG | - | chr6.1:76618007-76618026 | MS.gene37293:intron | 30.0% |
| !!! | TTGGGTTGGAATTTTTTGAA+TGG | - | chr6.1:76618006-76618025 | MS.gene37293:intron | 30.0% |
| !!! | TTTATTTTTTTTGGGTTGGG+GGG | - | chr6.1:76618032-76618051 | MS.gene37293:intron | 30.0% |
| !!! | TTTTTACTTCTCTTTGGAGT+AGG | - | chr6.1:76620228-76620247 | MS.gene37293:intron | 30.0% |
| AAGAAATAGCTACAGCCATA+AGG | + | chr6.1:76621988-76622007 | None:intergenic | 35.0% | |
| AAGTAGCAAGATAATTGGTG+AGG | + | chr6.1:76620412-76620431 | None:intergenic | 35.0% | |
| AAGTCTTAACCTACTAAGTG+GGG | + | chr6.1:76617923-76617942 | None:intergenic | 35.0% | |
| AATGGGATGTTATGTTACCT+CGG | + | chr6.1:76616788-76616807 | None:intergenic | 35.0% | |
| AATTCATTGCTATGGGAAAG+TGG | - | chr6.1:76618289-76618308 | MS.gene37293:intron | 35.0% | |
| ACATTTAGGTAGAAACACAG+TGG | + | chr6.1:76621601-76621620 | None:intergenic | 35.0% | |
| ACCATAGTCATTCAATAAGG+TGG | + | chr6.1:76621524-76621543 | None:intergenic | 35.0% | |
| CAAAGTCTTAACCTACTAAG+TGG | + | chr6.1:76617925-76617944 | None:intergenic | 35.0% | |
| CAAGGACAACTTGATTCATT+TGG | + | chr6.1:76621903-76621922 | None:intergenic | 35.0% | |
| CCCTATTAGGTTTAAACTTG+AGG | + | chr6.1:76618789-76618808 | None:intergenic | 35.0% | |
| CCTTCATGTAGACATAAAAC+TGG | + | chr6.1:76620010-76620029 | None:intergenic | 35.0% | |
| CTTGAGGAAACCTTAGTTTA+AGG | + | chr6.1:76618773-76618792 | None:intergenic | 35.0% | |
| GAAACCTTAGTTTAAGGAGA+TGG | + | chr6.1:76618767-76618786 | None:intergenic | 35.0% | |
| GCTGAAGAATTCATTGCTAT+GGG | - | chr6.1:76618282-76618301 | MS.gene37293:intron | 35.0% | |
| GTGTCCCTAATAAGTTCATA+AGG | + | chr6.1:76621727-76621746 | None:intergenic | 35.0% | |
| TACTCCATCTCCTTAAACTA+AGG | - | chr6.1:76618760-76618779 | MS.gene37293:CDS | 35.0% | |
| TAGACATAAAACTGGCAGTA+TGG | + | chr6.1:76620002-76620021 | None:intergenic | 35.0% | |
| TCATAGTTATTAGTTGCAGC+TGG | - | chr6.1:76620590-76620609 | MS.gene37293:intron | 35.0% | |
| TCCACCTTATTGAATGACTA+TGG | - | chr6.1:76621520-76621539 | MS.gene37293:intron | 35.0% | |
| TGCAACGTTTGAATTATGCT+AGG | + | chr6.1:76621797-76621816 | None:intergenic | 35.0% | |
| TGTTGTGGATATATGACTAC+TGG | + | chr6.1:76620304-76620323 | None:intergenic | 35.0% | |
| TTAGGGAATGTGAAAGTTGA+AGG | - | chr6.1:76617540-76617559 | MS.gene37293:intron | 35.0% | |
| TTCAACCAAACTATCAGAAC+TGG | + | chr6.1:76619502-76619521 | None:intergenic | 35.0% | |
| TTGGATTGTGTGATTGTGTT+TGG | - | chr6.1:76617274-76617293 | MS.gene37293:intron | 35.0% | |
| TTTATTTGATGCCTAGAGTG+AGG | - | chr6.1:76621046-76621065 | MS.gene37293:intron | 35.0% | |
| ! | AATTAGTCTCCATGAACAAG+AGG | + | chr6.1:76618937-76618956 | None:intergenic | 35.0% |
| ! | AGGTAACTTGTGTAAGAATG+AGG | - | chr6.1:76620522-76620541 | MS.gene37293:CDS | 35.0% |
| ! | TAATGAGTTGGACAGGAATA+TGG | - | chr6.1:76617854-76617873 | MS.gene37293:intron | 35.0% |
| ! | TAGAACTTCTGTTTGCCTTT+TGG | - | chr6.1:76620676-76620695 | MS.gene37293:intron | 35.0% |
| ! | TGAATCAAGTTGTCCTTGTT+AGG | - | chr6.1:76621905-76621924 | MS.gene37293:intron | 35.0% |
| !! | AGAATGTGTTTGTTGTGCTA+TGG | - | chr6.1:76617328-76617347 | MS.gene37293:CDS | 35.0% |
| !! | CAATTTCTAGCCTTTAAGTC+TGG | - | chr6.1:76621940-76621959 | MS.gene37293:intron | 35.0% |
| !! | CACCATCTCTAATGTTTTGA+AGG | - | chr6.1:76620148-76620167 | MS.gene37293:intron | 35.0% |
| !! | CCAGTTTTATGTCTACATGA+AGG | - | chr6.1:76620007-76620026 | MS.gene37293:intron | 35.0% |
| !! | CTACATGAAGGCATTGAATT+TGG | - | chr6.1:76620019-76620038 | MS.gene37293:intron | 35.0% |
| !! | GAACTGGAAAAGTGTTTCAA+AGG | + | chr6.1:76620912-76620931 | None:intergenic | 35.0% |
| !! | TGCGTTTTAAGCATAACGAT+TGG | - | chr6.1:76618834-76618853 | MS.gene37293:CDS | 35.0% |
| !! | TTTTCGTGATTTTGGGGATT+TGG | - | chr6.1:76616830-76616849 | MS.gene37293:intron | 35.0% |
| !!! | TTTTTTGTTGCGAGTGCTAA+AGG | - | chr6.1:76617491-76617510 | MS.gene37293:intron | 35.0% |
| AAGATGATAGACGGTCCAAA+AGG | + | chr6.1:76620694-76620713 | None:intergenic | 40.0% | |
| AAGCAAAGTCTGCTAACTTG+AGG | + | chr6.1:76618258-76618277 | None:intergenic | 40.0% | |
| AATACCTTCTAGGCCCTATT+AGG | + | chr6.1:76618802-76618821 | None:intergenic | 40.0% | |
| ACAATCTCCATGACTTCATC+TGG | + | chr6.1:76619796-76619815 | None:intergenic | 40.0% | |
| ACCATTCCTAGTCTCTCTTA+TGG | + | chr6.1:76621072-76621091 | None:intergenic | 40.0% | |
| ACTTATTAGGGACACACTTC+AGG | - | chr6.1:76621732-76621751 | MS.gene37293:intron | 40.0% | |
| AGAAACAGCTCTCTATGTTC+TGG | + | chr6.1:76620128-76620147 | None:intergenic | 40.0% | |
| AGACAATTCGTGACATTGCA+AGG | + | chr6.1:76619139-76619158 | None:intergenic | 40.0% | |
| AGCCTTTAAGTCTGGCTATA+GGG | - | chr6.1:76621948-76621967 | MS.gene37293:intron | 40.0% | |
| AGTCAAATCACTAGAGGCAA+AGG | - | chr6.1:76617784-76617803 | MS.gene37293:intron | 40.0% | |
| ATATATGACTACTGGCCGAA+TGG | + | chr6.1:76620296-76620315 | None:intergenic | 40.0% | |
| ATCAAGCAGCAAAACAACTG+AGG | + | chr6.1:76619559-76619578 | None:intergenic | 40.0% | |
| ATGGGATGTTATGTTACCTC+GGG | + | chr6.1:76616787-76616806 | None:intergenic | 40.0% | |
| ATGTCACGAATTGTCTAGAG+AGG | - | chr6.1:76619143-76619162 | MS.gene37293:intron | 40.0% | |
| CAAATGTCTCAATACTAGCG+AGG | + | chr6.1:76621119-76621138 | None:intergenic | 40.0% | |
| CAAGTTACCTGAAATACGTC+AGG | + | chr6.1:76620512-76620531 | None:intergenic | 40.0% | |
| CAATGCATTCTTCATGCACA+AGG | + | chr6.1:76621648-76621667 | None:intergenic | 40.0% | |
| CATGTTGCAGTGTGATTTAC+TGG | - | chr6.1:76621381-76621400 | MS.gene37293:intron | 40.0% | |
| CCTATAGTAAGACTAGATGG+TGG | - | chr6.1:76617681-76617700 | MS.gene37293:intron | 40.0% | |
| CTATGATTGAATGTAGGGGA+CGG | + | chr6.1:76620576-76620595 | None:intergenic | 40.0% | |
| CTGGAGAATGATGCCAAATA+TGG | - | chr6.1:76621424-76621443 | MS.gene37293:intron | 40.0% | |
| GAAGAACAGAGATTGTGTTG+TGG | + | chr6.1:76620319-76620338 | None:intergenic | 40.0% | |
| GAAGGAATGGGTGTAATTGA+TGG | - | chr6.1:76619063-76619082 | MS.gene37293:CDS | 40.0% | |
| GAGATGCAACATACCTAACA+AGG | + | chr6.1:76621921-76621940 | None:intergenic | 40.0% | |
| GAGTGTAGTCAAATCACTAG+AGG | - | chr6.1:76617778-76617797 | MS.gene37293:intron | 40.0% | |
| GATTCAATTGGAAGGTTGGA+TGG | - | chr6.1:76617099-76617118 | MS.gene37293:CDS | 40.0% | |
| GCAAGGTGATATGAATGTCT+GGG | + | chr6.1:76619122-76619141 | None:intergenic | 40.0% | |
| GCACCTATAGTAAGACTAGA+TGG | - | chr6.1:76617678-76617697 | MS.gene37293:intron | 40.0% | |
| GCATTGAATTTGGCTGTTGA+TGG | - | chr6.1:76620029-76620048 | MS.gene37293:intron | 40.0% | |
| GGCTGAAGAATTCATTGCTA+TGG | - | chr6.1:76618281-76618300 | MS.gene37293:intron | 40.0% | |
| GGGTAGAAACATCTTATCCT+AGG | - | chr6.1:76619165-76619184 | MS.gene37293:intron | 40.0% | |
| GTGGAATGATGCAACAGTAT+CGG | - | chr6.1:76617126-76617145 | MS.gene37293:CDS | 40.0% | |
| GTGGTAAGACATGAAGTCAT+AGG | - | chr6.1:76617619-76617638 | MS.gene37293:intron | 40.0% | |
| TAAACCTAATAGGGCCTAGA+AGG | - | chr6.1:76618795-76618814 | MS.gene37293:CDS | 40.0% | |
| TAGCCTTTAAGTCTGGCTAT+AGG | - | chr6.1:76621947-76621966 | MS.gene37293:intron | 40.0% | |
| TCAAGTTAGCAGACTTTGCT+TGG | - | chr6.1:76618257-76618276 | MS.gene37293:intron | 40.0% | |
| TCGATAGCTTCTTGAAAGAG+TGG | - | chr6.1:76620090-76620109 | MS.gene37293:intron | 40.0% | |
| TGAGAACAAAGCTAGTGACT+TGG | - | chr6.1:76622119-76622138 | MS.gene37293:CDS | 40.0% | |
| TGAGAATCCAGATGAAGTCA+TGG | - | chr6.1:76619786-76619805 | MS.gene37293:intron | 40.0% | |
| TGAGTTACTCTTGGAGTCAA+TGG | - | chr6.1:76619258-76619277 | MS.gene37293:intron | 40.0% | |
| TGAGTTACTCTTGGAGTCAA+TGG | + | chr6.1:76619277-76619258 | None:intergenic | 40.0% | |
| TGCAAGGTGATATGAATGTC+TGG | + | chr6.1:76619123-76619142 | None:intergenic | 40.0% | |
| TGTCACGAATTGTCTAGAGA+GGG | - | chr6.1:76619144-76619163 | MS.gene37293:intron | 40.0% | |
| ! | AAACTGGGCTTAGGTTGTTT+GGG | - | chr6.1:76617704-76617723 | MS.gene37293:intron | 40.0% |
| ! | AATTTTCACAGCGATTCCAC+TGG | + | chr6.1:76620816-76620835 | None:intergenic | 40.0% |
| ! | ATGATGCAACAGTATCGGAT+TGG | - | chr6.1:76617131-76617150 | MS.gene37293:CDS | 40.0% |
| ! | CAGAGATTAATGAGTTGGAC+AGG | - | chr6.1:76617847-76617866 | MS.gene37293:intron | 40.0% |
| ! | TCGGTGTGTGTTTTGTATGA+TGG | - | chr6.1:76617300-76617319 | MS.gene37293:CDS | 40.0% |
| !! | AAGACTAGATGGTGGAAACT+GGG | - | chr6.1:76617689-76617708 | MS.gene37293:intron | 40.0% |
| !! | AGGAAGGAGAGTACTTAACA+CGG | - | chr6.1:76617756-76617775 | MS.gene37293:intron | 40.0% |
| !! | CCACCATCTAGTCTTACTAT+AGG | + | chr6.1:76617684-76617703 | None:intergenic | 40.0% |
| !! | GCATGTTTTGAGTGAAGCTA+AGG | - | chr6.1:76620448-76620467 | MS.gene37293:intron | 40.0% |
| !! | GCTTGATGATGTTGTATCTG+TGG | - | chr6.1:76619572-76619591 | MS.gene37293:intron | 40.0% |
| !! | GTGTGATTGTGTTTGGTGTT+CGG | - | chr6.1:76617281-76617300 | MS.gene37293:intron | 40.0% |
| !! | TAAGACTAGATGGTGGAAAC+TGG | - | chr6.1:76617688-76617707 | MS.gene37293:intron | 40.0% |
| !! | TGTTTTGAGTGAAGCTAAGG+AGG | - | chr6.1:76620451-76620470 | MS.gene37293:intron | 40.0% |
| !! | TTGATGGTTCTTTGAGATCC+AGG | - | chr6.1:76619079-76619098 | MS.gene37293:CDS | 40.0% |
| !!! | TGCTACTTTTTCTGGAGAAG+AGG | - | chr6.1:76620424-76620443 | MS.gene37293:intron | 40.0% |
| !!! | TTGGGGATTTGGTTGGTTTT+GGG | - | chr6.1:76616841-76616860 | MS.gene37293:intron | 40.0% |
| !!! | TTTGGGGATTTGGTTGGTTT+TGG | - | chr6.1:76616840-76616859 | MS.gene37293:intron | 40.0% |
| AAGGTTGGATGACAGAAGAG+AGG | - | chr6.1:76617967-76617986 | MS.gene37293:intron | 45.0% | |
| AGAGAGAGAGAGAGAGAGAA+GGG | + | chr6.1:76619286-76619305 | None:intergenic | 45.0% | |
| AGAGAGGAATGATGCAACAG+TGG | - | chr6.1:76617983-76618002 | MS.gene37293:intron | 45.0% | |
| AGGAATGATGCAACAGTGGT+TGG | - | chr6.1:76617987-76618006 | MS.gene37293:intron | 45.0% | |
| AGTTAGCAGACTTTGCTTGG+AGG | - | chr6.1:76618260-76618279 | MS.gene37293:intron | 45.0% | |
| CACGACCCCACAAAAAATGA+AGG | + | chr6.1:76617182-76617201 | None:intergenic | 45.0% | |
| CAGACTTCGTCATCTAAGCA+AGG | + | chr6.1:76621291-76621310 | None:intergenic | 45.0% | |
| CATCGGACTCACTATCCATT+CGG | - | chr6.1:76620278-76620297 | MS.gene37293:intron | 45.0% | |
| CATTGCTATGGGAAAGTGGT+TGG | - | chr6.1:76618293-76618312 | MS.gene37293:intron | 45.0% | |
| GAATATAAAGAGAAGCCCCG+GGG | - | chr6.1:76617726-76617745 | MS.gene37293:intron | 45.0% | |
| GCATGTAGACATGCACCTTA+TGG | - | chr6.1:76621970-76621989 | MS.gene37293:intron | 45.0% | |
| GCCATAAGAGAGACTAGGAA+TGG | - | chr6.1:76621068-76621087 | MS.gene37293:intron | 45.0% | |
| GGAATATAAAGAGAAGCCCC+GGG | - | chr6.1:76617725-76617744 | MS.gene37293:intron | 45.0% | |
| GGAATGATGCAACAGTGGTT+GGG | - | chr6.1:76617988-76618007 | MS.gene37293:intron | 45.0% | |
| GGGAATATAAAGAGAAGCCC+CGG | - | chr6.1:76617724-76617743 | MS.gene37293:intron | 45.0% | |
| GTCACGAATTGTCTAGAGAG+GGG | - | chr6.1:76619145-76619164 | MS.gene37293:intron | 45.0% | |
| GTGTTTCAAAGGATGAGACG+CGG | + | chr6.1:76620901-76620920 | None:intergenic | 45.0% | |
| GTTGCAGTCTCTTCTCTTTC+TGG | - | chr6.1:76620937-76620956 | MS.gene37293:intron | 45.0% | |
| TCTCAATACTAGCGAGGTCA+TGG | + | chr6.1:76621113-76621132 | None:intergenic | 45.0% | |
| TCTCCTTCCTACATAATCCC+CGG | + | chr6.1:76617746-76617765 | None:intergenic | 45.0% | |
| TGCCCTATAGCCAGACTTAA+AGG | + | chr6.1:76621953-76621972 | None:intergenic | 45.0% | |
| TGTGCAGTCATCACACTGAT+CGG | - | chr6.1:76622068-76622087 | MS.gene37293:CDS | 45.0% | |
| TTCAGTGAACTGTGTACAGC+TGG | - | chr6.1:76618539-76618558 | MS.gene37293:intron | 45.0% | |
| TTGTTGCGAGTGCTAAAGGA+GGG | - | chr6.1:76617495-76617514 | MS.gene37293:intron | 45.0% | |
| TTTGTTGCGAGTGCTAAAGG+AGG | - | chr6.1:76617494-76617513 | MS.gene37293:intron | 45.0% | |
| ! | ATTGATGCTAGAGAGGGCAT+GGG | - | chr6.1:76618059-76618078 | MS.gene37293:intron | 45.0% |
| ! | GAAACTGGGCTTAGGTTGTT+TGG | - | chr6.1:76617703-76617722 | MS.gene37293:intron | 45.0% |
| ! | GAACAAAGCTAGTGACTTGG+AGG | - | chr6.1:76622122-76622141 | MS.gene37293:CDS | 45.0% |
| ! | GTGAAGATGGACTCTACATC+TGG | + | chr6.1:76619739-76619758 | None:intergenic | 45.0% |
| ! | TTGGTTGATCTCAGCTCTGA+TGG | - | chr6.1:76621688-76621707 | MS.gene37293:intron | 45.0% |
| !! | CGTGATTTTGGGGATTTGGT+TGG | - | chr6.1:76616834-76616853 | MS.gene37293:intron | 45.0% |
| !! | GCTGTGTTGTTTGTGGCTTA+GGG | - | chr6.1:76617523-76617542 | MS.gene37293:intron | 45.0% |
| !! | GGATGATGCTGTGTTGTTTG+TGG | - | chr6.1:76617516-76617535 | MS.gene37293:intron | 45.0% |
| !! | GGTGTCATTGATGCTAGAGA+GGG | - | chr6.1:76618053-76618072 | MS.gene37293:intron | 45.0% |
| !! | TGCTGTGTTGTTTGTGGCTT+AGG | - | chr6.1:76617522-76617541 | MS.gene37293:intron | 45.0% |
| !!! | CTTCATTTTTTGTGGGGTCG+TGG | - | chr6.1:76617180-76617199 | MS.gene37293:intron | 45.0% |
| !!! | TGGGGATTTGGTTGGTTTTG+GGG | - | chr6.1:76616842-76616861 | MS.gene37293:intron | 45.0% |
| !! | TTAATTATTATAAGAATTAA+TGG | - | chr6.1:76619213-76619232 | MS.gene37293:intron | 5.0% |
| !! | TTAATTATTATAAGAATTAA+TGG | + | chr6.1:76619232-76619213 | None:intergenic | 5.0% |
| !! | TTAATTCTTATAATAATTAA+TGG | - | chr6.1:76618697-76618716 | MS.gene37293:CDS | 5.0% |
| !! | TTAATTCTTATAATAATTAA+TGG | + | chr6.1:76618716-76618697 | None:intergenic | 5.0% |
| CATCACACTGATCGGGTGTT+TGG | - | chr6.1:76622076-76622095 | MS.gene37293:CDS | 50.0% | |
| CATTGATGCTAGAGAGGGCA+TGG | - | chr6.1:76618058-76618077 | MS.gene37293:intron | 50.0% | |
| CTCCTTCCTACATAATCCCC+GGG | + | chr6.1:76617745-76617764 | None:intergenic | 50.0% | |
| CTCTCTTATGGCCTCACTCT+AGG | + | chr6.1:76621060-76621079 | None:intergenic | 50.0% | |
| GAATCGGACAACGGAAAGAG+CGG | + | chr6.1:76616734-76616753 | None:intergenic | 50.0% | |
| GAGACTGCAACAGAGAGAAC+TGG | + | chr6.1:76620928-76620947 | None:intergenic | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+AGG | + | chr6.1:76619287-76619306 | None:intergenic | 50.0% | |
| GCAGCCAAATGAAAAGCCTG+CGG | - | chr6.1:76619843-76619862 | MS.gene37293:intron | 50.0% | |
| GGGTGTTTGGTCAGCATCAA+TGG | - | chr6.1:76622089-76622108 | MS.gene37293:CDS | 50.0% | |
| GTAACAACTCGCTTGAGTCC+TGG | + | chr6.1:76619100-76619119 | None:intergenic | 50.0% | |
| GTGAGGCCATAAGAGAGACT+AGG | - | chr6.1:76621063-76621082 | MS.gene37293:intron | 50.0% | |
| GTGCAGTCATCACACTGATC+GGG | - | chr6.1:76622069-76622088 | MS.gene37293:CDS | 50.0% | |
| TACATCTTCAATCGCACCGC+AGG | + | chr6.1:76619862-76619881 | None:intergenic | 50.0% | |
| TACTGGACATGCCTGCTGTT+GGG | - | chr6.1:76621398-76621417 | MS.gene37293:intron | 50.0% | |
| TATGGGAAAGTGGTTGGAGC+TGG | - | chr6.1:76618299-76618318 | MS.gene37293:intron | 50.0% | |
| TCCTTCCTACATAATCCCCG+GGG | + | chr6.1:76617744-76617763 | None:intergenic | 50.0% | |
| TGATGCAACAGTGGTTGGGT+TGG | - | chr6.1:76617992-76618011 | MS.gene37293:intron | 50.0% | |
| TGGAAGGTTGGATGGAAGAG+TGG | - | chr6.1:76617107-76617126 | MS.gene37293:CDS | 50.0% | |
| TGTAGCTGACCCCACTTAGT+AGG | - | chr6.1:76617911-76617930 | MS.gene37293:intron | 50.0% | |
| TTACTGGACATGCCTGCTGT+TGG | - | chr6.1:76621397-76621416 | MS.gene37293:intron | 50.0% | |
| ! | GAGGGCATGGGAAAAGTTGA+AGG | - | chr6.1:76618071-76618090 | MS.gene37293:intron | 50.0% |
| ! | GATCTCAGCTCTGATGGATC+TGG | - | chr6.1:76621694-76621713 | MS.gene37293:intron | 50.0% |
| ! | TCACAGCGATTCCACTGGTT+CGG | + | chr6.1:76620811-76620830 | None:intergenic | 50.0% |
| !! | AGATGGTGGAAACTGGGCTT+AGG | - | chr6.1:76617695-76617714 | MS.gene37293:intron | 50.0% |
| !! | GAAGGCACCTGACGTATTTC+AGG | - | chr6.1:76620502-76620521 | MS.gene37293:CDS | 50.0% |
| !! | GGGTGTCATTGATGCTAGAG+AGG | - | chr6.1:76618052-76618071 | MS.gene37293:intron | 50.0% |
| AGAAGCCCCGGGGATTATGT+AGG | - | chr6.1:76617736-76617755 | MS.gene37293:intron | 55.0% | |
| AGGCAAGCTCAGAGGCGAAT+CGG | + | chr6.1:76616750-76616769 | None:intergenic | 55.0% | |
| ATTCGCCTCTGAGCTTGCCT+GGG | - | chr6.1:76616750-76616769 | MS.gene37293:intron | 55.0% | |
| CTAGCGAGGTCATGGCTTCA+TGG | + | chr6.1:76621105-76621124 | None:intergenic | 55.0% | |
| CTCAGAGGCGAATCGGACAA+CGG | + | chr6.1:76616743-76616762 | None:intergenic | 55.0% | |
| GGAAAGAGCGGCGTCTTCTT+CGG | + | chr6.1:76616722-76616741 | None:intergenic | 55.0% | |
| GGTGAGAGATTCCGAACCAG+TGG | - | chr6.1:76620797-76620816 | MS.gene37293:intron | 55.0% | |
| TTCAAAGGATGAGACGCGGC+AGG | + | chr6.1:76620897-76620916 | None:intergenic | 55.0% | |
| TTCTCCAGTTGCCCAACAGC+AGG | + | chr6.1:76621412-76621431 | None:intergenic | 55.0% | |
| ! | CGCACCGCAGGCTTTTCATT+TGG | + | chr6.1:76619850-76619869 | None:intergenic | 55.0% |
| ! | TTTTTGTGGGGTCGTGGCTC+TGG | - | chr6.1:76617186-76617205 | MS.gene37293:intron | 55.0% |
| ATCAGCCCAGGCAAGCTCAG+AGG | + | chr6.1:76616758-76616777 | None:intergenic | 60.0% | |
| CATGCCTGCTGTTGGGCAAC+TGG | - | chr6.1:76621405-76621424 | MS.gene37293:intron | 60.0% | |
| GATTCGCCTCTGAGCTTGCC+TGG | - | chr6.1:76616749-76616768 | MS.gene37293:intron | 60.0% | |
| GCCCCGGGGATTATGTAGGA+AGG | - | chr6.1:76617740-76617759 | MS.gene37293:intron | 60.0% | |
| GCGGCGTCTTCTTCGGAAGT+AGG | + | chr6.1:76616715-76616734 | None:intergenic | 60.0% | |
| TGAGACGCGGCAGGTAGAAG+TGG | + | chr6.1:76620888-76620907 | None:intergenic | 60.0% | |
| GAGCTTGCCTGGGCTGATGC+TGG | - | chr6.1:76616760-76616779 | MS.gene37293:intron | 65.0% | |
| CTCGGGACCAGCATCAGCCC+AGG | + | chr6.1:76616770-76616789 | None:intergenic | 70.0% | |
| CTGGGCTGATGCTGGTCCCG+AGG | - | chr6.1:76616768-76616787 | MS.gene37293:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 76616697 | 76622144 | 76616697 | ID=MS.gene37293 |
| chr6.1 | mRNA | 76616697 | 76622144 | 76616697 | ID=MS.gene37293.t1;Parent=MS.gene37293 |
| chr6.1 | exon | 76622052 | 76622144 | 76622052 | ID=MS.gene37293.t1.exon1;Parent=MS.gene37293.t1 |
| chr6.1 | CDS | 76622052 | 76622144 | 76622052 | ID=cds.MS.gene37293.t1;Parent=MS.gene37293.t1 |
| chr6.1 | exon | 76620466 | 76620595 | 76620466 | ID=MS.gene37293.t1.exon2;Parent=MS.gene37293.t1 |
| chr6.1 | CDS | 76620466 | 76620595 | 76620466 | ID=cds.MS.gene37293.t1;Parent=MS.gene37293.t1 |
| chr6.1 | exon | 76618963 | 76619101 | 76618963 | ID=MS.gene37293.t1.exon3;Parent=MS.gene37293.t1 |
| chr6.1 | CDS | 76618963 | 76619101 | 76618963 | ID=cds.MS.gene37293.t1;Parent=MS.gene37293.t1 |
| chr6.1 | exon | 76618661 | 76618873 | 76618661 | ID=MS.gene37293.t1.exon4;Parent=MS.gene37293.t1 |
| chr6.1 | CDS | 76618661 | 76618873 | 76618661 | ID=cds.MS.gene37293.t1;Parent=MS.gene37293.t1 |
| chr6.1 | exon | 76618318 | 76618456 | 76618318 | ID=MS.gene37293.t1.exon5;Parent=MS.gene37293.t1 |
| chr6.1 | CDS | 76618318 | 76618456 | 76618318 | ID=cds.MS.gene37293.t1;Parent=MS.gene37293.t1 |
| chr6.1 | exon | 76617300 | 76617450 | 76617300 | ID=MS.gene37293.t1.exon6;Parent=MS.gene37293.t1 |
| chr6.1 | CDS | 76617300 | 76617450 | 76617300 | ID=cds.MS.gene37293.t1;Parent=MS.gene37293.t1 |
| chr6.1 | exon | 76617088 | 76617197 | 76617088 | ID=MS.gene37293.t1.exon7;Parent=MS.gene37293.t1 |
| chr6.1 | CDS | 76617088 | 76617197 | 76617088 | ID=cds.MS.gene37293.t1;Parent=MS.gene37293.t1 |
| chr6.1 | exon | 76616915 | 76617012 | 76616915 | ID=MS.gene37293.t1.exon8;Parent=MS.gene37293.t1 |
| chr6.1 | CDS | 76616915 | 76617012 | 76616915 | ID=cds.MS.gene37293.t1;Parent=MS.gene37293.t1 |
| chr6.1 | exon | 76616697 | 76616766 | 76616697 | ID=MS.gene37293.t1.exon9;Parent=MS.gene37293.t1 |
| chr6.1 | CDS | 76616697 | 76616766 | 76616697 | ID=cds.MS.gene37293.t1;Parent=MS.gene37293.t1 |
| Gene Sequence |
| Protein sequence |
