Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018310.t1 | RHN50194.1 | 98 | 410 | 8 | 0 | 1 | 410 | 1 | 410 | 1.30E-223 | 785.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018310.t1 | Q54KZ8 | 35.2 | 349 | 214 | 7 | 56 | 398 | 50 | 392 | 1.8e-56 | 221.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018310.t1 | A0A396HEF3 | 98.0 | 410 | 8 | 0 | 1 | 410 | 1 | 410 | 9.2e-224 | 785.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene018310 | MS.gene86150 | PPI |
| MS.gene031997 | MS.gene018310 | PPI |
| MS.gene018310 | MS.gene045655 | PPI |
| MS.gene29609 | MS.gene018310 | PPI |
| MS.gene018310 | MS.gene69249 | PPI |
| MS.gene42526 | MS.gene018310 | PPI |
| MS.gene018309 | MS.gene018310 | PPI |
| MS.gene018310 | MS.gene80792 | PPI |
| MS.gene018310 | MS.gene37293 | PPI |
| MS.gene008080 | MS.gene018310 | PPI |
| MS.gene72510 | MS.gene018310 | PPI |
| MS.gene018310 | MS.gene014112 | PPI |
| MS.gene018310 | MS.gene39043 | PPI |
| MS.gene017884 | MS.gene018310 | PPI |
| MS.gene018310 | MS.gene057321 | PPI |
| MS.gene80663 | MS.gene018310 | PPI |
| MS.gene018310 | MS.gene77710 | PPI |
| MS.gene56673 | MS.gene018310 | PPI |
| MS.gene018310 | MS.gene85021 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018310.t1 | MTR_6g015395 | 97.561 | 410 | 10 | 0 | 1 | 410 | 1 | 410 | 0.0 | 830 |
| MS.gene018310.t1 | MTR_7g091480 | 97.073 | 410 | 12 | 0 | 1 | 410 | 1 | 410 | 0.0 | 820 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018310.t1 | AT5G15610 | 68.039 | 413 | 129 | 1 | 1 | 410 | 1 | 413 | 0.0 | 598 |
| MS.gene018310.t1 | AT3G02200 | 65.228 | 417 | 138 | 1 | 1 | 410 | 1 | 417 | 0.0 | 581 |
| MS.gene018310.t1 | AT5G15610 | 63.575 | 442 | 129 | 2 | 1 | 410 | 1 | 442 | 0.0 | 580 |
| MS.gene018310.t1 | AT3G02200 | 66.116 | 363 | 123 | 0 | 1 | 363 | 1 | 363 | 0.0 | 513 |
Find 84 sgRNAs with CRISPR-Local
Find 345 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATTCCTTATGAACTTATT+AGG | 0.125836 | 6.2:+10363714 | MS.gene018310:CDS |
| TTCTTGAAAGAGTGGAAAAT+TGG | 0.210478 | 6.2:+10362093 | MS.gene018310:CDS |
| TAATAAGTTCATAAGGAATT+TGG | 0.226927 | 6.2:-10363712 | None:intergenic |
| CTGATATAACAGACCATATT+TGG | 0.228059 | 6.2:-10363432 | None:intergenic |
| GAAGGCACCTGACGTATTTC+AGG | 0.250708 | 6.2:+10362497 | MS.gene018310:CDS |
| CTACATGAAGGCATTGAATT+TGG | 0.253476 | 6.2:+10362014 | MS.gene018310:CDS |
| CATGTTGCAGTGTGATTTAC+TGG | 0.258669 | 6.2:+10363376 | MS.gene018310:intron |
| GATCAATTTGTATAATCTTT+TGG | 0.267985 | 6.2:+10361966 | MS.gene018310:CDS |
| CTGCCAAACCTTGGGCTGCC+TGG | 0.287603 | 6.2:-10364597 | None:intergenic |
| GATTCGCCTCTGAGCTTGCC+TGG | 0.291138 | 6.2:+10358745 | MS.gene018310:CDS |
| AATTCCTTATGAACTTATTA+GGG | 0.303697 | 6.2:+10363715 | MS.gene018310:CDS |
| TCCACCTTATTGAATGACTA+TGG | 0.328479 | 6.2:+10363515 | MS.gene018310:CDS |
| CAAGGACAACTTGATTCATT+TGG | 0.340745 | 6.2:-10363895 | None:intergenic |
| CCCATCTTCTGATACTTTGT+TGG | 0.341074 | 6.2:-10364572 | None:intergenic |
| ACAATCTCCATGACTTCATC+TGG | 0.341158 | 6.2:-10361788 | None:intergenic |
| CATGCCTGCTGTTGGGCAAC+TGG | 0.343731 | 6.2:+10363400 | MS.gene018310:CDS |
| TTTACCATAGTCATTCAATA+AGG | 0.369504 | 6.2:-10363519 | None:intergenic |
| TGAATCAAGTTGTCCTTGTT+AGG | 0.370330 | 6.2:+10363900 | MS.gene018310:CDS |
| GAGCTTGCCTGGGCTGATGC+TGG | 0.382511 | 6.2:+10358756 | MS.gene018310:CDS |
| ATGATGATGAAGTTGAACTA+TGG | 0.393896 | 6.2:+10363828 | MS.gene018310:CDS |
| GCATTGAATTTGGCTGTTGA+TGG | 0.394749 | 6.2:+10362024 | MS.gene018310:CDS |
| ACTTATTAGGGACACACTTC+AGG | 0.395673 | 6.2:+10363727 | MS.gene018310:CDS |
| TGCCAAACCTTGGGCTGCCT+GGG | 0.396092 | 6.2:-10364596 | None:intergenic |
| TAGACATAAAACTGGCAGTA+TGG | 0.404837 | 6.2:-10361994 | None:intergenic |
| TACTGGACATGCCTGCTGTT+GGG | 0.410514 | 6.2:+10363393 | MS.gene018310:CDS |
| TCAAGTTAGCAGACTTTGCT+TGG | 0.414784 | 6.2:+10360254 | MS.gene018310:CDS |
| TGATACTTTGTTGGCCTGAA+TGG | 0.415532 | 6.2:-10364563 | None:intergenic |
| CATCACACTGATCGGGTGTT+TGG | 0.417804 | 6.2:+10364071 | MS.gene018310:CDS |
| AAATGTGATCAGTACCATTC+AGG | 0.428425 | 6.2:+10364549 | MS.gene018310:CDS |
| CTGGAGAATGATGCCAAATA+TGG | 0.429289 | 6.2:+10363419 | MS.gene018310:CDS |
| GTCCCAGGCAGCCCAAGGTT+TGG | 0.430791 | 6.2:+10364594 | MS.gene018310:CDS |
| GGAAAGAGCGGCGTCTTCTT+CGG | 0.432130 | 6.2:-10358715 | None:intergenic |
| CCTTCATGTAGACATAAAAC+TGG | 0.439865 | 6.2:-10362002 | None:intergenic |
| GGCTGAAGAATTCATTGCTA+TGG | 0.447568 | 6.2:+10360278 | MS.gene018310:CDS |
| AGAAACAGCTCTCTATGTTC+TGG | 0.452737 | 6.2:-10362120 | None:intergenic |
| GATCTCAGCTCTGATGGATC+TGG | 0.452853 | 6.2:+10363689 | MS.gene018310:CDS |
| GGGTGTTTGGTCAGCATCAA+TGG | 0.455622 | 6.2:+10364084 | MS.gene018310:CDS |
| TTGGTTGATCTCAGCTCTGA+TGG | 0.460760 | 6.2:+10363683 | MS.gene018310:CDS |
| CTCAGCGAACTGCCAAACCT+TGG | 0.465528 | 6.2:-10364606 | None:intergenic |
| TCTTGAAAGAGTGGAAAATT+GGG | 0.466987 | 6.2:+10362094 | MS.gene018310:CDS |
| ATTCGCCTCTGAGCTTGCCT+GGG | 0.468400 | 6.2:+10358746 | MS.gene018310:CDS |
| TCAGCGAACTGCCAAACCTT+GGG | 0.470820 | 6.2:-10364605 | None:intergenic |
| CATTGCTATGGGAAAGTGGT+TGG | 0.477727 | 6.2:+10360290 | MS.gene018310:CDS |
| ATTGCAGATAATAGTGAAGA+TGG | 0.482900 | 6.2:-10361744 | None:intergenic |
| AGGCAAGCTCAGAGGCGAAT+CGG | 0.484064 | 6.2:-10358743 | None:intergenic |
| GTGTCCCTAATAAGTTCATA+AGG | 0.487262 | 6.2:-10363719 | None:intergenic |
| GCCAACAAAGTATCAGAAGA+TGG | 0.494239 | 6.2:+10364571 | MS.gene018310:CDS |
| TTACTGGACATGCCTGCTGT+TGG | 0.496081 | 6.2:+10363392 | MS.gene018310:CDS |
| TTCTCCAGTTGCCCAACAGC+AGG | 0.499064 | 6.2:-10363404 | None:intergenic |
| TACATCTTCAATCGCACCGC+AGG | 0.502707 | 6.2:-10361854 | None:intergenic |
| CAATGCATTCTTCATGCACA+AGG | 0.504463 | 6.2:-10363640 | None:intergenic |
| TTCCTTCAAAACATTAGAGA+TGG | 0.510695 | 6.2:-10362145 | None:intergenic |
| CTCGGGACCAGCATCAGCCC+AGG | 0.516732 | 6.2:-10358763 | None:intergenic |
| GCGGCGTCTTCTTCGGAAGT+AGG | 0.526498 | 6.2:-10358708 | None:intergenic |
| GAACAAAGCTAGTGACTTGG+AGG | 0.528393 | 6.2:+10364117 | MS.gene018310:CDS |
| TGTGCAGTCATCACACTGAT+CGG | 0.531347 | 6.2:+10364063 | MS.gene018310:intron |
| AGTAGGAACCACCGTCGTCA+TGG | 0.531600 | 6.2:-10358691 | None:intergenic |
| AATTCATTGCTATGGGAAAG+TGG | 0.536465 | 6.2:+10360286 | MS.gene018310:CDS |
| GTGCAGTCATCACACTGATC+GGG | 0.542885 | 6.2:+10364064 | MS.gene018310:intron |
| ACCATAGTCATTCAATAAGG+TGG | 0.547992 | 6.2:-10363516 | None:intergenic |
| GCTGAAGAATTCATTGCTAT+GGG | 0.548812 | 6.2:+10360279 | MS.gene018310:CDS |
| CAAGTTACCTGAAATACGTC+AGG | 0.554665 | 6.2:-10362504 | None:intergenic |
| TGAGAATCCAGATGAAGTCA+TGG | 0.556784 | 6.2:+10361781 | MS.gene018310:CDS |
| AGTTAGCAGACTTTGCTTGG+AGG | 0.561124 | 6.2:+10360257 | MS.gene018310:CDS |
| AAAGTTAATTGACTGTAAGA+TGG | 0.565834 | 6.2:+10363871 | MS.gene018310:CDS |
| TCGATAGCTTCTTGAAAGAG+TGG | 0.566129 | 6.2:+10362085 | MS.gene018310:CDS |
| TGATGATGAAGTTGAACTAT+GGG | 0.573567 | 6.2:+10363829 | MS.gene018310:CDS |
| AGTATCAGAAGATGGGTCCC+AGG | 0.578337 | 6.2:+10364579 | MS.gene018310:CDS |
| TATGGGAAAGTGGTTGGAGC+TGG | 0.579039 | 6.2:+10360296 | MS.gene018310:CDS |
| CCAACAAAGTATCAGAAGAT+GGG | 0.582224 | 6.2:+10364572 | MS.gene018310:CDS |
| GATGGGTCCCAGGCAGCCCA+AGG | 0.586592 | 6.2:+10364589 | MS.gene018310:CDS |
| CTGGGCTGATGCTGGTCCCG+AGG | 0.590869 | 6.2:+10358764 | MS.gene018310:CDS |
| TGAGAACAAAGCTAGTGACT+TGG | 0.607952 | 6.2:+10364114 | MS.gene018310:CDS |
| AAGCAAAGTCTGCTAACTTG+AGG | 0.611744 | 6.2:-10360252 | None:intergenic |
| ATCAGCCCAGGCAAGCTCAG+AGG | 0.615538 | 6.2:-10358751 | None:intergenic |
| GAGATGCAACATACCTAACA+AGG | 0.623749 | 6.2:-10363913 | None:intergenic |
| CTCAGAGGCGAATCGGACAA+CGG | 0.624823 | 6.2:-10358736 | None:intergenic |
| GAATCGGACAACGGAAAGAG+CGG | 0.648134 | 6.2:-10358727 | None:intergenic |
| AAGTAGCAAGATAATTGGTG+AGG | 0.654137 | 6.2:-10362404 | None:intergenic |
| CGCACAAACAACCATGACGA+CGG | 0.654703 | 6.2:+10358680 | None:intergenic |
| CAAGGTTTGGCAGTTCGCTG+AGG | 0.660482 | 6.2:+10364607 | MS.gene018310:CDS |
| AACAAAGCTAGTGACTTGGA+GGG | 0.674755 | 6.2:+10364118 | MS.gene018310:CDS |
| GCAGCCAAATGAAAAGCCTG+CGG | 0.678328 | 6.2:+10361838 | MS.gene018310:CDS |
| ACAAACAACCATGACGACGG+TGG | 0.690644 | 6.2:+10358683 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+AGG | - | chr6.2:10360603-10360584 | None:intergenic | 0.0% |
| !! | ATATAATTTATAGATTCAAT+TGG | + | chr6.2:10359083-10359102 | MS.gene018310:intron | 10.0% |
| !! | ATATATATATATATATGAGA+AGG | + | chr6.2:10360618-10360637 | MS.gene018310:intron | 10.0% |
| !! | TAATTTAATTGTTATATATG+TGG | - | chr6.2:10364257-10364276 | None:intergenic | 10.0% |
| !! | TATATATATATATATGAGAA+GGG | + | chr6.2:10360619-10360638 | MS.gene018310:intron | 10.0% |
| !! | TTAATTACTAATAATACATA+TGG | + | chr6.2:10360721-10360740 | MS.gene018310:intron | 10.0% |
| !!! | CTTTCTTTTAAATAAAATTA+AGG | + | chr6.2:10359372-10359391 | MS.gene018310:intron | 10.0% |
| !!! | TTTATCTTAATCTTTAAAAT+CGG | + | chr6.2:10363150-10363169 | MS.gene018310:intron | 10.0% |
| !!! | TTTTTTAATTTGATTGTTTT+TGG | + | chr6.2:10359246-10359265 | MS.gene018310:intron | 10.0% |
| !! | AAAAAAATACCTGTATTATA+GGG | - | chr6.2:10364219-10364238 | None:intergenic | 15.0% |
| !! | ATTAATTAGAAATAATTCCT+AGG | - | chr6.2:10361180-10361199 | None:intergenic | 15.0% |
| !! | ATTATTTCATCAAAACATTT+AGG | - | chr6.2:10363610-10363629 | None:intergenic | 15.0% |
| !! | TCTATATAATTGATTGTAAA+TGG | + | chr6.2:10359214-10359233 | MS.gene018310:intron | 15.0% |
| !! | TGAATTTATTAGTATTATCT+TGG | + | chr6.2:10360212-10360231 | MS.gene018310:intron | 15.0% |
| !!! | AACTTGTATTTTATATACTT+TGG | + | chr6.2:10362745-10362764 | MS.gene018310:intron | 15.0% |
| !!! | AATATCAATTTTTCTCTTAT+AGG | + | chr6.2:10362711-10362730 | MS.gene018310:intron | 15.0% |
| !!! | ATCTCTTTTTTTTTTTTTGA+GGG | + | chr6.2:10360454-10360473 | MS.gene018310:intron | 15.0% |
| !!! | TATCTCTTTTTTTTTTTTTG+AGG | + | chr6.2:10360453-10360472 | MS.gene018310:intron | 15.0% |
| !!! | TGAATATATTCAATTTTACA+GGG | - | chr6.2:10364294-10364313 | None:intergenic | 15.0% |
| !!! | TTTTTAAATTAATACCTTCT+AGG | - | chr6.2:10360807-10360826 | None:intergenic | 15.0% |
| !! | AAACATAATATCTTCTCAAA+AGG | + | chr6.2:10362609-10362628 | MS.gene018310:intron | 20.0% |
| !! | AAATTCCTTATGAACTTATT+AGG | + | chr6.2:10363714-10363733 | MS.gene018310:CDS | 20.0% |
| !! | AATAACAGATATTGTAAACA+CGG | - | chr6.2:10361704-10361723 | None:intergenic | 20.0% |
| !! | AATAACTATGATTGAATGTA+GGG | - | chr6.2:10362576-10362595 | None:intergenic | 20.0% |
| !! | AATTCCTTATGAACTTATTA+GGG | + | chr6.2:10363715-10363734 | MS.gene018310:CDS | 20.0% |
| !! | AATTTATAGATTCAATTGGA+AGG | + | chr6.2:10359087-10359106 | MS.gene018310:intron | 20.0% |
| !! | ATAATTGATTGTAAATGGTT+TGG | + | chr6.2:10359219-10359238 | MS.gene018310:intron | 20.0% |
| !! | CAAAAAAATACCTGTATTAT+AGG | - | chr6.2:10364220-10364239 | None:intergenic | 20.0% |
| !! | CTGTAAAATTGAATATATTC+AGG | + | chr6.2:10364293-10364312 | MS.gene018310:intron | 20.0% |
| !! | GTGTTGTATATAAATGAAAT+TGG | + | chr6.2:10358889-10358908 | MS.gene018310:intron | 20.0% |
| !! | TAATAACTATGATTGAATGT+AGG | - | chr6.2:10362577-10362596 | None:intergenic | 20.0% |
| !! | TAATAAGTTCATAAGGAATT+TGG | - | chr6.2:10363715-10363734 | None:intergenic | 20.0% |
| !! | TACTAATAATACATATGGTA+AGG | + | chr6.2:10360726-10360745 | MS.gene018310:intron | 20.0% |
| !! | TTAGTATTATTCAAATTCTG+AGG | + | chr6.2:10363241-10363260 | MS.gene018310:intron | 20.0% |
| !!! | AACCTAAAAAATTATCGATT+TGG | - | chr6.2:10358808-10358827 | None:intergenic | 20.0% |
| !!! | AATGGGCTTTTATTTTTTTT+GGG | + | chr6.2:10360021-10360040 | MS.gene018310:intron | 20.0% |
| !!! | ACCTAAAAAATTATCGATTT+GGG | - | chr6.2:10358807-10358826 | None:intergenic | 20.0% |
| !!! | AGTTTCTCTTATAATTTTCT+AGG | - | chr6.2:10359811-10359830 | None:intergenic | 20.0% |
| !!! | ATTATGAGTGATGAATTTTT+GGG | + | chr6.2:10361668-10361687 | MS.gene018310:intron | 20.0% |
| !!! | ATTATTTTTGTTCGATTTGT+AGG | + | chr6.2:10364516-10364535 | MS.gene018310:intron | 20.0% |
| !!! | ATTTTGTTTTTACTTCTCTT+TGG | + | chr6.2:10362217-10362236 | MS.gene018310:intron | 20.0% |
| !!! | CTGAATATATTCAATTTTAC+AGG | - | chr6.2:10364295-10364314 | None:intergenic | 20.0% |
| !!! | GATCAATTTGTATAATCTTT+TGG | + | chr6.2:10361966-10361985 | MS.gene018310:CDS | 20.0% |
| !!! | TAGTATTATCTTGGTTTTTT+AGG | + | chr6.2:10360221-10360240 | MS.gene018310:intron | 20.0% |
| !!! | TATTATGAGTGATGAATTTT+TGG | + | chr6.2:10361667-10361686 | MS.gene018310:intron | 20.0% |
| !!! | TTATTTTTGTTCGATTTGTA+GGG | + | chr6.2:10364517-10364536 | MS.gene018310:intron | 20.0% |
| !!! | TTCTCAAAAATTTCTGAAAA+AGG | + | chr6.2:10360351-10360370 | MS.gene018310:CDS | 20.0% |
| !!! | TTGATGAAATAATGTTGTTT+AGG | + | chr6.2:10363617-10363636 | MS.gene018310:intron | 20.0% |
| !!! | TTTTTTCCTTCATTTTTTGT+GGG | + | chr6.2:10359169-10359188 | MS.gene018310:intron | 20.0% |
| !!! | TTTTTTTCCTTCATTTTTTG+TGG | + | chr6.2:10359168-10359187 | MS.gene018310:intron | 20.0% |
| ! | AAAAATGAGATTGATGTCAT+TGG | + | chr6.2:10363664-10363683 | MS.gene018310:CDS | 25.0% |
| ! | AAAGTTAATTGACTGTAAGA+TGG | + | chr6.2:10363871-10363890 | MS.gene018310:CDS | 25.0% |
| ! | AAGAATTAATGGTCAAGATT+TGG | + | chr6.2:10361219-10361238 | MS.gene018310:intron | 25.0% |
| ! | AAGAATTAATGGTCAAGATT+TGG | - | chr6.2:10361238-10361219 | None:intergenic | 25.0% |
| ! | AGAAAAAGTAGCAAGATAAT+TGG | - | chr6.2:10362412-10362431 | None:intergenic | 25.0% |
| ! | ATAACTATGATTGAATGTAG+GGG | - | chr6.2:10362575-10362594 | None:intergenic | 25.0% |
| ! | ATATATATATATAGGACAGC+TGG | - | chr6.2:10360576-10360595 | None:intergenic | 25.0% |
| ! | ATCCTAATTCTTTGATGTTA+TGG | + | chr6.2:10360978-10360997 | MS.gene018310:intron | 25.0% |
| ! | ATCTAATTGTCAGATTCAAT+TGG | + | chr6.2:10359414-10359433 | MS.gene018310:intron | 25.0% |
| ! | ATGTAATATTACATCCTACT+TGG | + | chr6.2:10361872-10361891 | MS.gene018310:intron | 25.0% |
| ! | ATGTTTCACAGATAATTGAT+TGG | + | chr6.2:10361639-10361658 | MS.gene018310:intron | 25.0% |
| ! | CAACATAAGTTTATTGTCAT+CGG | + | chr6.2:10362256-10362275 | MS.gene018310:intron | 25.0% |
| ! | CACCAAAACAATCAAAAAAA+TGG | - | chr6.2:10362776-10362795 | None:intergenic | 25.0% |
| ! | GAAATGATACAACAGTAATT+GGG | + | chr6.2:10359443-10359462 | MS.gene018310:intron | 25.0% |
| ! | TCAAAATTTCAAAACCAAGT+AGG | - | chr6.2:10361889-10361908 | None:intergenic | 25.0% |
| ! | TCATAATTCATTGATGTTGA+AGG | + | chr6.2:10361040-10361059 | MS.gene018310:intron | 25.0% |
| ! | TGAAATGATACAACAGTAAT+TGG | + | chr6.2:10359442-10359461 | MS.gene018310:intron | 25.0% |
| ! | TGATATTACAAGATGATAGA+CGG | - | chr6.2:10362698-10362717 | None:intergenic | 25.0% |
| ! | TTAACAAAATTAAGACAGCT+TGG | - | chr6.2:10360432-10360451 | None:intergenic | 25.0% |
| ! | TTATCTGTGAAACATCAAAT+TGG | - | chr6.2:10361634-10361653 | None:intergenic | 25.0% |
| ! | TTTACCATAGTCATTCAATA+AGG | - | chr6.2:10363522-10363541 | None:intergenic | 25.0% |
| !! | ATTTTCTGAACATCTCAAAT+TGG | - | chr6.2:10359060-10359079 | None:intergenic | 25.0% |
| !! | CAAAAATTTCTGAAAAAGGT+AGG | + | chr6.2:10360355-10360374 | MS.gene018310:intron | 25.0% |
| !! | GAATTGATGTTATTTGTGAA+CGG | + | chr6.2:10360149-10360168 | MS.gene018310:intron | 25.0% |
| !! | TCTTTTTAAACGATTGAGAA+TGG | + | chr6.2:10360865-10360884 | MS.gene018310:intron | 25.0% |
| !! | TTGAAAATGATTTTGCAACT+CGG | - | chr6.2:10362840-10362859 | None:intergenic | 25.0% |
| !! | TTGTTGATAGATTCAATTGA+AGG | + | chr6.2:10359945-10359964 | MS.gene018310:intron | 25.0% |
| !!! | AAAAATTATCGATTTGGGAA+TGG | - | chr6.2:10358802-10358821 | None:intergenic | 25.0% |
| !!! | AAAATTATCGATTTGGGAAT+GGG | - | chr6.2:10358801-10358820 | None:intergenic | 25.0% |
| !!! | AATTATCTTGCTACTTTTTC+TGG | + | chr6.2:10362411-10362430 | MS.gene018310:CDS | 25.0% |
| !!! | AATTTGATTGTTTTTGGTGT+TGG | + | chr6.2:10359252-10359271 | MS.gene018310:intron | 25.0% |
| !!! | ATGTTTTGAAGGAAAACAAA+AGG | + | chr6.2:10362154-10362173 | MS.gene018310:CDS | 25.0% |
| !!! | CTTTTATTTTTTTTGGGTTG+GGG | + | chr6.2:10360027-10360046 | MS.gene018310:intron | 25.0% |
| !!! | GAATGGGCTTTTATTTTTTT+TGG | + | chr6.2:10360020-10360039 | MS.gene018310:intron | 25.0% |
| !!! | GCTTTTATTTTTTTTGGGTT+GGG | + | chr6.2:10360026-10360045 | MS.gene018310:intron | 25.0% |
| !!! | TCCCAAATCGATAATTTTTT+AGG | + | chr6.2:10358803-10358822 | MS.gene018310:intron | 25.0% |
| !!! | TGCCATTTTTTTGATTGTTT+TGG | + | chr6.2:10362771-10362790 | MS.gene018310:intron | 25.0% |
| !!! | TTTTAGGTTTTCGTGATTTT+GGG | + | chr6.2:10358819-10358838 | MS.gene018310:intron | 25.0% |
| !!! | TTTTATTTTTTTTGGGTTGG+GGG | + | chr6.2:10360028-10360047 | MS.gene018310:intron | 25.0% |
| !!! | TTTTGAGAAAATCAATTCAG+CGG | - | chr6.2:10360340-10360359 | None:intergenic | 25.0% |
| !!! | TTTTTAGGTTTTCGTGATTT+TGG | + | chr6.2:10358818-10358837 | MS.gene018310:intron | 25.0% |
| !!! | TTTTTCCTTCATTTTTTGTG+GGG | + | chr6.2:10359170-10359189 | MS.gene018310:intron | 25.0% |
| AAACAATTACCTCTTGTTCA+TGG | + | chr6.2:10360920-10360939 | MS.gene018310:intron | 30.0% | |
| AAAGTCTTAACCTACTAAGT+GGG | - | chr6.2:10359921-10359940 | None:intergenic | 30.0% | |
| AAATACTGTTCATGCACAAT+TGG | + | chr6.2:10363539-10363558 | MS.gene018310:intron | 30.0% | |
| AACAGTAATTGGGTTTAGAA+TGG | + | chr6.2:10359453-10359472 | MS.gene018310:intron | 30.0% | |
| AAGTAACTCAGTTGAAACAA+TGG | - | chr6.2:10364490-10364509 | None:intergenic | 30.0% | |
| AATTGTCAGATTCAATTGGA+AGG | + | chr6.2:10359418-10359437 | MS.gene018310:intron | 30.0% | |
| AGATTCAGAGATTAATGAGT+TGG | + | chr6.2:10359839-10359858 | MS.gene018310:intron | 30.0% | |
| ATAAAAATCGCATTCAGGAA+TGG | - | chr6.2:10364342-10364361 | None:intergenic | 30.0% | |
| ATTCATTGATGTTGAAGGAA+TGG | + | chr6.2:10361045-10361064 | MS.gene018310:intron | 30.0% | |
| ATTCGAAGTGTATACATTTC+TGG | + | chr6.2:10364391-10364410 | MS.gene018310:intron | 30.0% | |
| ATTGCAGATAATAGTGAAGA+TGG | - | chr6.2:10361747-10361766 | None:intergenic | 30.0% | |
| CAATTGTTACTGAATGCAAA+GGG | - | chr6.2:10361377-10361396 | None:intergenic | 30.0% | |
| CAGAACTGGATAATAAATTC+TGG | - | chr6.2:10361483-10361502 | None:intergenic | 30.0% | |
| CCTCAAGTTTAAACCTAATA+GGG | + | chr6.2:10360781-10360800 | MS.gene018310:intron | 30.0% | |
| CTCATTAATCTCTGAATCTT+TGG | - | chr6.2:10359838-10359857 | None:intergenic | 30.0% | |
| CTCCATAACATCAAAGAATT+AGG | - | chr6.2:10360983-10361002 | None:intergenic | 30.0% | |
| CTGATATAACAGACCATATT+TGG | - | chr6.2:10363435-10363454 | None:intergenic | 30.0% | |
| CTTGGTCTATATCTCTAATA+TGG | - | chr6.2:10360414-10360433 | None:intergenic | 30.0% | |
| TATAGATTCAATTGGAAGGT+TGG | + | chr6.2:10359091-10359110 | MS.gene018310:intron | 30.0% | |
| TATCTTCTCAAAAGGTGATA+AGG | + | chr6.2:10362617-10362636 | MS.gene018310:intron | 30.0% | |
| TATTCAGGAGCTAATTACTT+AGG | + | chr6.2:10364308-10364327 | MS.gene018310:intron | 30.0% | |
| TCAATTGTTACTGAATGCAA+AGG | - | chr6.2:10361378-10361397 | None:intergenic | 30.0% | |
| TCATCATCATTGATCTGAAA+GGG | - | chr6.2:10363818-10363837 | None:intergenic | 30.0% | |
| TCCTCAAGTTTAAACCTAAT+AGG | + | chr6.2:10360780-10360799 | MS.gene018310:intron | 30.0% | |
| TCTTGAAAGAGTGGAAAATT+GGG | + | chr6.2:10362094-10362113 | MS.gene018310:CDS | 30.0% | |
| TGAAAATTGTGCTTGTGATA+TGG | + | chr6.2:10358968-10358987 | MS.gene018310:intron | 30.0% | |
| TGATAGATTCAATTGAAGGT+TGG | + | chr6.2:10359949-10359968 | MS.gene018310:intron | 30.0% | |
| TTCATCATCATTGATCTGAA+AGG | - | chr6.2:10363819-10363838 | None:intergenic | 30.0% | |
| TTCATTGATGTTGAAGGAAT+GGG | + | chr6.2:10361046-10361065 | MS.gene018310:intron | 30.0% | |
| TTCCTTCAAAACATTAGAGA+TGG | - | chr6.2:10362148-10362167 | None:intergenic | 30.0% | |
| TTCTTGAAAGAGTGGAAAAT+TGG | + | chr6.2:10362093-10362112 | MS.gene018310:CDS | 30.0% | |
| TTTGCATTCAGTAACAATTG+AGG | + | chr6.2:10361377-10361396 | MS.gene018310:intron | 30.0% | |
| ! | ATGATGATGAAGTTGAACTA+TGG | + | chr6.2:10363828-10363847 | MS.gene018310:CDS | 30.0% |
| ! | ATTATCCAGTTCTGATAGTT+TGG | + | chr6.2:10361489-10361508 | MS.gene018310:intron | 30.0% |
| ! | CAATTTTTCTCTTATAGGCA+TGG | + | chr6.2:10362716-10362735 | MS.gene018310:intron | 30.0% |
| ! | CTATCGATCTTTTTGAATGA+AGG | - | chr6.2:10362072-10362091 | None:intergenic | 30.0% |
| ! | TCAAGATTTTTCTTACTCAG+AGG | + | chr6.2:10363459-10363478 | MS.gene018310:CDS | 30.0% |
| ! | TGATGATGAAGTTGAACTAT+GGG | + | chr6.2:10363829-10363848 | MS.gene018310:CDS | 30.0% |
| ! | TTTTTATCTCAGCATGTCAA+AGG | + | chr6.2:10362368-10362387 | MS.gene018310:intron | 30.0% |
| !! | AATCTTTAAAATCGGCAAGT+GGG | + | chr6.2:10363158-10363177 | MS.gene018310:intron | 30.0% |
| !! | TAATCTTTAAAATCGGCAAG+TGG | + | chr6.2:10363157-10363176 | MS.gene018310:intron | 30.0% |
| !! | TTGTATTTTTGCTGAATGTG+TGG | + | chr6.2:10359597-10359616 | MS.gene018310:intron | 30.0% |
| !! | TTTAGGTTTTCGTGATTTTG+GGG | + | chr6.2:10358820-10358839 | MS.gene018310:intron | 30.0% |
| !!! | GGCTTTTATTTTTTTTGGGT+TGG | + | chr6.2:10360025-10360044 | MS.gene018310:intron | 30.0% |
| !!! | TAACTCTTTTGAGTTACTCT+TGG | + | chr6.2:10361244-10361263 | MS.gene018310:intron | 30.0% |
| !!! | TAACTCTTTTGAGTTACTCT+TGG | - | chr6.2:10361263-10361244 | None:intergenic | 30.0% |
| !!! | TGCAATTGTTGATTTTGTGA+AGG | + | chr6.2:10362479-10362498 | MS.gene018310:CDS | 30.0% |
| !!! | TGGGTTGGAATTTTTTGAAT+GGG | + | chr6.2:10360004-10360023 | MS.gene018310:intron | 30.0% |
| !!! | TTGGGTTGGAATTTTTTGAA+TGG | + | chr6.2:10360003-10360022 | MS.gene018310:intron | 30.0% |
| !!! | TTTATTTTTTTTGGGTTGGG+GGG | + | chr6.2:10360029-10360048 | MS.gene018310:intron | 30.0% |
| !!! | TTTTTACTTCTCTTTGGAGT+AGG | + | chr6.2:10362223-10362242 | MS.gene018310:intron | 30.0% |
| AAATGTGATCAGTACCATTC+AGG | + | chr6.2:10364549-10364568 | MS.gene018310:CDS | 35.0% | |
| AAGAAATAGCTACAGCCATA+AGG | - | chr6.2:10363983-10364002 | None:intergenic | 35.0% | |
| AAGTAGCAAGATAATTGGTG+AGG | - | chr6.2:10362407-10362426 | None:intergenic | 35.0% | |
| AAGTCTTAACCTACTAAGTG+GGG | - | chr6.2:10359920-10359939 | None:intergenic | 35.0% | |
| AATGGGATGTTATGTTACCT+CGG | - | chr6.2:10358784-10358803 | None:intergenic | 35.0% | |
| AATTCATTGCTATGGGAAAG+TGG | + | chr6.2:10360286-10360305 | MS.gene018310:CDS | 35.0% | |
| ACATTTAGGTAGAAACACAG+TGG | - | chr6.2:10363596-10363615 | None:intergenic | 35.0% | |
| ACCATAGTCATTCAATAAGG+TGG | - | chr6.2:10363519-10363538 | None:intergenic | 35.0% | |
| CAAACTGTTATTAAGTGCTC+AGG | - | chr6.2:10364441-10364460 | None:intergenic | 35.0% | |
| CAAAGTCTTAACCTACTAAG+TGG | - | chr6.2:10359922-10359941 | None:intergenic | 35.0% | |
| CAAGCATAAAAATCGCATTC+AGG | - | chr6.2:10364347-10364366 | None:intergenic | 35.0% | |
| CAAGGACAACTTGATTCATT+TGG | - | chr6.2:10363898-10363917 | None:intergenic | 35.0% | |
| CCCTATTAGGTTTAAACTTG+AGG | - | chr6.2:10360784-10360803 | None:intergenic | 35.0% | |
| CCTTCATGTAGACATAAAAC+TGG | - | chr6.2:10362005-10362024 | None:intergenic | 35.0% | |
| CTTGAGGAAACCTTAGTTTA+AGG | - | chr6.2:10360768-10360787 | None:intergenic | 35.0% | |
| GAAACCTTAGTTTAAGGAGA+TGG | - | chr6.2:10360762-10360781 | None:intergenic | 35.0% | |
| GCTGAAGAATTCATTGCTAT+GGG | + | chr6.2:10360279-10360298 | MS.gene018310:CDS | 35.0% | |
| GTGTCCCTAATAAGTTCATA+AGG | - | chr6.2:10363722-10363741 | None:intergenic | 35.0% | |
| TACTCCATCTCCTTAAACTA+AGG | + | chr6.2:10360755-10360774 | MS.gene018310:intron | 35.0% | |
| TAGACATAAAACTGGCAGTA+TGG | - | chr6.2:10361997-10362016 | None:intergenic | 35.0% | |
| TCATAGTTATTAGTTGCAGC+TGG | + | chr6.2:10362585-10362604 | MS.gene018310:intron | 35.0% | |
| TCCACCTTATTGAATGACTA+TGG | + | chr6.2:10363515-10363534 | MS.gene018310:CDS | 35.0% | |
| TGCAACGTTTGAATTATGCT+AGG | - | chr6.2:10363792-10363811 | None:intergenic | 35.0% | |
| TGTTGTGGATATATGACTAC+TGG | - | chr6.2:10362299-10362318 | None:intergenic | 35.0% | |
| TTAGGGAATGTGAAAGTTGA+AGG | + | chr6.2:10359537-10359556 | MS.gene018310:intron | 35.0% | |
| TTCAACCAAACTATCAGAAC+TGG | - | chr6.2:10361497-10361516 | None:intergenic | 35.0% | |
| TTGGATTGTGTGATTGTGTT+TGG | + | chr6.2:10359271-10359290 | MS.gene018310:intron | 35.0% | |
| TTTATTTGATGCCTAGAGTG+AGG | + | chr6.2:10363041-10363060 | MS.gene018310:intron | 35.0% | |
| ! | AATTAGTCTCCATGAACAAG+AGG | - | chr6.2:10360932-10360951 | None:intergenic | 35.0% |
| ! | AGGTAACTTGTGTAAGAATG+AGG | + | chr6.2:10362517-10362536 | MS.gene018310:intron | 35.0% |
| ! | CCAACAAAGTATCAGAAGAT+GGG | + | chr6.2:10364572-10364591 | MS.gene018310:CDS | 35.0% |
| ! | TAATGAGTTGGACAGGAATA+TGG | + | chr6.2:10359851-10359870 | MS.gene018310:intron | 35.0% |
| ! | TAGAACTTCTGTTTGCCTTT+TGG | + | chr6.2:10362671-10362690 | MS.gene018310:intron | 35.0% |
| ! | TGAATCAAGTTGTCCTTGTT+AGG | + | chr6.2:10363900-10363919 | MS.gene018310:CDS | 35.0% |
| !! | AGAATGTGTTTGTTGTGCTA+TGG | + | chr6.2:10359325-10359344 | MS.gene018310:intron | 35.0% |
| !! | CAATTTCTAGCCTTTAAGTC+TGG | + | chr6.2:10363935-10363954 | MS.gene018310:intron | 35.0% |
| !! | CACCATCTCTAATGTTTTGA+AGG | + | chr6.2:10362143-10362162 | MS.gene018310:CDS | 35.0% |
| !! | CCAGTTTTATGTCTACATGA+AGG | + | chr6.2:10362002-10362021 | MS.gene018310:CDS | 35.0% |
| !! | CTACATGAAGGCATTGAATT+TGG | + | chr6.2:10362014-10362033 | MS.gene018310:CDS | 35.0% |
| !! | GAACTGGAAAAGTGTTTCAA+AGG | - | chr6.2:10362907-10362926 | None:intergenic | 35.0% |
| !! | TGCGTTTTAAGCATAACGAT+TGG | + | chr6.2:10360829-10360848 | MS.gene018310:intron | 35.0% |
| !! | TTTTCGTGATTTTGGGGATT+TGG | + | chr6.2:10358826-10358845 | MS.gene018310:intron | 35.0% |
| !!! | TTTTTTGTTGCGAGTGCTAA+AGG | + | chr6.2:10359488-10359507 | MS.gene018310:intron | 35.0% |
| AAGATGATAGACGGTCCAAA+AGG | - | chr6.2:10362689-10362708 | None:intergenic | 40.0% | |
| AAGCAAAGTCTGCTAACTTG+AGG | - | chr6.2:10360255-10360274 | None:intergenic | 40.0% | |
| AATACCTTCTAGGCCCTATT+AGG | - | chr6.2:10360797-10360816 | None:intergenic | 40.0% | |
| ACAATCTCCATGACTTCATC+TGG | - | chr6.2:10361791-10361810 | None:intergenic | 40.0% | |
| ACCATTCCTAGTCTCTCTTA+TGG | - | chr6.2:10363067-10363086 | None:intergenic | 40.0% | |
| ACTTATTAGGGACACACTTC+AGG | + | chr6.2:10363727-10363746 | MS.gene018310:CDS | 40.0% | |
| AGAAACAGCTCTCTATGTTC+TGG | - | chr6.2:10362123-10362142 | None:intergenic | 40.0% | |
| AGACAATTCGTGACATTGCA+AGG | - | chr6.2:10361134-10361153 | None:intergenic | 40.0% | |
| AGCCTTTAAGTCTGGCTATA+GGG | + | chr6.2:10363943-10363962 | MS.gene018310:intron | 40.0% | |
| AGTCAAATCACTAGAGGCAA+AGG | + | chr6.2:10359781-10359800 | MS.gene018310:intron | 40.0% | |
| ATATATGACTACTGGCCGAA+TGG | - | chr6.2:10362291-10362310 | None:intergenic | 40.0% | |
| ATCAAGCAGCAAAACAACTG+AGG | - | chr6.2:10361554-10361573 | None:intergenic | 40.0% | |
| ATGGGATGTTATGTTACCTC+GGG | - | chr6.2:10358783-10358802 | None:intergenic | 40.0% | |
| ATGTCACGAATTGTCTAGAG+AGG | + | chr6.2:10361138-10361157 | MS.gene018310:intron | 40.0% | |
| ATTTCAATCTGACTGAACGC+AGG | - | chr6.2:10364466-10364485 | None:intergenic | 40.0% | |
| CAAATGTCTCAATACTAGCG+AGG | - | chr6.2:10363114-10363133 | None:intergenic | 40.0% | |
| CAAGTTACCTGAAATACGTC+AGG | - | chr6.2:10362507-10362526 | None:intergenic | 40.0% | |
| CAATGCATTCTTCATGCACA+AGG | - | chr6.2:10363643-10363662 | None:intergenic | 40.0% | |
| CATGTTGCAGTGTGATTTAC+TGG | + | chr6.2:10363376-10363395 | MS.gene018310:intron | 40.0% | |
| CCCATCTTCTGATACTTTGT+TGG | - | chr6.2:10364575-10364594 | None:intergenic | 40.0% | |
| CCTATAGTAAGACTAGATGG+TGG | + | chr6.2:10359678-10359697 | MS.gene018310:intron | 40.0% | |
| CTATGATTGAATGTAGGGGA+CGG | - | chr6.2:10362571-10362590 | None:intergenic | 40.0% | |
| CTGGAGAATGATGCCAAATA+TGG | + | chr6.2:10363419-10363438 | MS.gene018310:CDS | 40.0% | |
| GAAGAACAGAGATTGTGTTG+TGG | - | chr6.2:10362314-10362333 | None:intergenic | 40.0% | |
| GAAGGAATGGGTGTAATTGA+TGG | + | chr6.2:10361058-10361077 | MS.gene018310:intron | 40.0% | |
| GAGATGCAACATACCTAACA+AGG | - | chr6.2:10363916-10363935 | None:intergenic | 40.0% | |
| GAGTGTAGTCAAATCACTAG+AGG | + | chr6.2:10359775-10359794 | MS.gene018310:intron | 40.0% | |
| GATTCAATTGGAAGGTTGGA+TGG | + | chr6.2:10359095-10359114 | MS.gene018310:intron | 40.0% | |
| GCAAGGTGATATGAATGTCT+GGG | - | chr6.2:10361117-10361136 | None:intergenic | 40.0% | |
| GCACCTATAGTAAGACTAGA+TGG | + | chr6.2:10359675-10359694 | MS.gene018310:intron | 40.0% | |
| GCATTGAATTTGGCTGTTGA+TGG | + | chr6.2:10362024-10362043 | MS.gene018310:CDS | 40.0% | |
| GGCTGAAGAATTCATTGCTA+TGG | + | chr6.2:10360278-10360297 | MS.gene018310:CDS | 40.0% | |
| GGGTAGAAACATCTTATCCT+AGG | + | chr6.2:10361160-10361179 | MS.gene018310:intron | 40.0% | |
| GTGGAATGATGCAACAGTAT+CGG | + | chr6.2:10359122-10359141 | MS.gene018310:intron | 40.0% | |
| GTGGTAAGACATGAAGTCAT+AGG | + | chr6.2:10359616-10359635 | MS.gene018310:intron | 40.0% | |
| TAAACCTAATAGGGCCTAGA+AGG | + | chr6.2:10360790-10360809 | MS.gene018310:intron | 40.0% | |
| TAGCCTTTAAGTCTGGCTAT+AGG | + | chr6.2:10363942-10363961 | MS.gene018310:intron | 40.0% | |
| TCAAGTTAGCAGACTTTGCT+TGG | + | chr6.2:10360254-10360273 | MS.gene018310:CDS | 40.0% | |
| TCGATAGCTTCTTGAAAGAG+TGG | + | chr6.2:10362085-10362104 | MS.gene018310:CDS | 40.0% | |
| TGAGAACAAAGCTAGTGACT+TGG | + | chr6.2:10364114-10364133 | MS.gene018310:CDS | 40.0% | |
| TGAGAATCCAGATGAAGTCA+TGG | + | chr6.2:10361781-10361800 | MS.gene018310:CDS | 40.0% | |
| TGAGTTACTCTTGGAGTCAA+TGG | + | chr6.2:10361253-10361272 | MS.gene018310:intron | 40.0% | |
| TGAGTTACTCTTGGAGTCAA+TGG | - | chr6.2:10361272-10361253 | None:intergenic | 40.0% | |
| TGATGCGATCCCTATAATAC+AGG | + | chr6.2:10364207-10364226 | MS.gene018310:intron | 40.0% | |
| TGCAAGGTGATATGAATGTC+TGG | - | chr6.2:10361118-10361137 | None:intergenic | 40.0% | |
| TGTCACGAATTGTCTAGAGA+GGG | + | chr6.2:10361139-10361158 | MS.gene018310:intron | 40.0% | |
| ! | AAACTGGGCTTAGGTTGTTT+GGG | + | chr6.2:10359701-10359720 | MS.gene018310:intron | 40.0% |
| ! | AACAAAGCTAGTGACTTGGA+GGG | + | chr6.2:10364118-10364137 | MS.gene018310:CDS | 40.0% |
| ! | AATTTTCACAGCGATTCCAC+TGG | - | chr6.2:10362811-10362830 | None:intergenic | 40.0% |
| ! | ATGATGCAACAGTATCGGAT+TGG | + | chr6.2:10359127-10359146 | MS.gene018310:intron | 40.0% |
| ! | CAGAGATTAATGAGTTGGAC+AGG | + | chr6.2:10359844-10359863 | MS.gene018310:intron | 40.0% |
| ! | GCCAACAAAGTATCAGAAGA+TGG | + | chr6.2:10364571-10364590 | MS.gene018310:CDS | 40.0% |
| ! | TCGGTGTGTGTTTTGTATGA+TGG | + | chr6.2:10359297-10359316 | MS.gene018310:intron | 40.0% |
| ! | TGATACTTTGTTGGCCTGAA+TGG | - | chr6.2:10364566-10364585 | None:intergenic | 40.0% |
| !! | AAGACTAGATGGTGGAAACT+GGG | + | chr6.2:10359686-10359705 | MS.gene018310:intron | 40.0% |
| !! | AGGAAGGAGAGTACTTAACA+CGG | + | chr6.2:10359753-10359772 | MS.gene018310:intron | 40.0% |
| !! | CCACCATCTAGTCTTACTAT+AGG | - | chr6.2:10359681-10359700 | None:intergenic | 40.0% |
| !! | GCATGTTTTGAGTGAAGCTA+AGG | + | chr6.2:10362443-10362462 | MS.gene018310:CDS | 40.0% |
| !! | GCTTGATGATGTTGTATCTG+TGG | + | chr6.2:10361567-10361586 | MS.gene018310:intron | 40.0% |
| !! | GTGTGATTGTGTTTGGTGTT+CGG | + | chr6.2:10359278-10359297 | MS.gene018310:intron | 40.0% |
| !! | TAAGACTAGATGGTGGAAAC+TGG | + | chr6.2:10359685-10359704 | MS.gene018310:intron | 40.0% |
| !! | TGTTTTGAGTGAAGCTAAGG+AGG | + | chr6.2:10362446-10362465 | MS.gene018310:CDS | 40.0% |
| !! | TTGATGGTTCTTTGAGATCC+AGG | + | chr6.2:10361074-10361093 | MS.gene018310:intron | 40.0% |
| !!! | TGCTACTTTTTCTGGAGAAG+AGG | + | chr6.2:10362419-10362438 | MS.gene018310:CDS | 40.0% |
| !!! | TTGGGGATTTGGTTGGTTTT+GGG | + | chr6.2:10358837-10358856 | MS.gene018310:intron | 40.0% |
| !!! | TTTGGGGATTTGGTTGGTTT+TGG | + | chr6.2:10358836-10358855 | MS.gene018310:intron | 40.0% |
| AAGGTTGGATGACAGAAGAG+AGG | + | chr6.2:10359964-10359983 | MS.gene018310:intron | 45.0% | |
| AGAGAGAGAGAGAGAGAGAA+GGG | - | chr6.2:10361281-10361300 | None:intergenic | 45.0% | |
| AGAGAGGAATGATGCAACAG+TGG | + | chr6.2:10359980-10359999 | MS.gene018310:intron | 45.0% | |
| AGGAATGATGCAACAGTGGT+TGG | + | chr6.2:10359984-10360003 | MS.gene018310:intron | 45.0% | |
| AGTTAGCAGACTTTGCTTGG+AGG | + | chr6.2:10360257-10360276 | MS.gene018310:CDS | 45.0% | |
| CACGACCCCACAAAAAATGA+AGG | - | chr6.2:10359178-10359197 | None:intergenic | 45.0% | |
| CAGACTTCGTCATCTAAGCA+AGG | - | chr6.2:10363286-10363305 | None:intergenic | 45.0% | |
| CATCGGACTCACTATCCATT+CGG | + | chr6.2:10362273-10362292 | MS.gene018310:intron | 45.0% | |
| CATTGCTATGGGAAAGTGGT+TGG | + | chr6.2:10360290-10360309 | MS.gene018310:CDS | 45.0% | |
| GAATATAAAGAGAAGCCCCG+GGG | + | chr6.2:10359723-10359742 | MS.gene018310:intron | 45.0% | |
| GCATGTAGACATGCACCTTA+TGG | + | chr6.2:10363965-10363984 | MS.gene018310:intron | 45.0% | |
| GCCATAAGAGAGACTAGGAA+TGG | + | chr6.2:10363063-10363082 | MS.gene018310:intron | 45.0% | |
| GGAATATAAAGAGAAGCCCC+GGG | + | chr6.2:10359722-10359741 | MS.gene018310:intron | 45.0% | |
| GGAATGATGCAACAGTGGTT+GGG | + | chr6.2:10359985-10360004 | MS.gene018310:intron | 45.0% | |
| GGGAATATAAAGAGAAGCCC+CGG | + | chr6.2:10359721-10359740 | MS.gene018310:intron | 45.0% | |
| GTCACGAATTGTCTAGAGAG+GGG | + | chr6.2:10361140-10361159 | MS.gene018310:intron | 45.0% | |
| GTGTTTCAAAGGATGAGACG+CGG | - | chr6.2:10362896-10362915 | None:intergenic | 45.0% | |
| GTTGCAGTCTCTTCTCTTTC+TGG | + | chr6.2:10362932-10362951 | MS.gene018310:intron | 45.0% | |
| TCTCAATACTAGCGAGGTCA+TGG | - | chr6.2:10363108-10363127 | None:intergenic | 45.0% | |
| TCTCCTTCCTACATAATCCC+CGG | - | chr6.2:10359743-10359762 | None:intergenic | 45.0% | |
| TGCCCTATAGCCAGACTTAA+AGG | - | chr6.2:10363948-10363967 | None:intergenic | 45.0% | |
| TGTGCAGTCATCACACTGAT+CGG | + | chr6.2:10364063-10364082 | MS.gene018310:intron | 45.0% | |
| TTCAGTGAACTGTGTACAGC+TGG | + | chr6.2:10360536-10360555 | MS.gene018310:intron | 45.0% | |
| TTGTTGCGAGTGCTAAAGGA+GGG | + | chr6.2:10359492-10359511 | MS.gene018310:intron | 45.0% | |
| TTTGTTGCGAGTGCTAAAGG+AGG | + | chr6.2:10359491-10359510 | MS.gene018310:intron | 45.0% | |
| ! | ATTGATGCTAGAGAGGGCAT+GGG | + | chr6.2:10360056-10360075 | MS.gene018310:intron | 45.0% |
| ! | GAAACTGGGCTTAGGTTGTT+TGG | + | chr6.2:10359700-10359719 | MS.gene018310:intron | 45.0% |
| ! | GAACAAAGCTAGTGACTTGG+AGG | + | chr6.2:10364117-10364136 | MS.gene018310:CDS | 45.0% |
| ! | GTGAAGATGGACTCTACATC+TGG | - | chr6.2:10361734-10361753 | None:intergenic | 45.0% |
| ! | TTGGTTGATCTCAGCTCTGA+TGG | + | chr6.2:10363683-10363702 | MS.gene018310:CDS | 45.0% |
| !! | CGTGATTTTGGGGATTTGGT+TGG | + | chr6.2:10358830-10358849 | MS.gene018310:intron | 45.0% |
| !! | GCTGTGTTGTTTGTGGCTTA+GGG | + | chr6.2:10359520-10359539 | MS.gene018310:intron | 45.0% |
| !! | GGATGATGCTGTGTTGTTTG+TGG | + | chr6.2:10359513-10359532 | MS.gene018310:intron | 45.0% |
| !! | GGTGTCATTGATGCTAGAGA+GGG | + | chr6.2:10360050-10360069 | MS.gene018310:intron | 45.0% |
| !! | TGCTGTGTTGTTTGTGGCTT+AGG | + | chr6.2:10359519-10359538 | MS.gene018310:intron | 45.0% |
| !!! | CTTCATTTTTTGTGGGGTCG+TGG | + | chr6.2:10359176-10359195 | MS.gene018310:intron | 45.0% |
| !!! | TGGGGATTTGGTTGGTTTTG+GGG | + | chr6.2:10358838-10358857 | MS.gene018310:intron | 45.0% |
| !! | TTAATTATTATAAGAATTAA+TGG | + | chr6.2:10361208-10361227 | MS.gene018310:intron | 5.0% |
| !! | TTAATTATTATAAGAATTAA+TGG | - | chr6.2:10361227-10361208 | None:intergenic | 5.0% |
| !! | TTAATTCTTATAATAATTAA+TGG | + | chr6.2:10360692-10360711 | MS.gene018310:intron | 5.0% |
| !! | TTAATTCTTATAATAATTAA+TGG | - | chr6.2:10360711-10360692 | None:intergenic | 5.0% |
| AGTATCAGAAGATGGGTCCC+AGG | + | chr6.2:10364579-10364598 | MS.gene018310:CDS | 50.0% | |
| CATCACACTGATCGGGTGTT+TGG | + | chr6.2:10364071-10364090 | MS.gene018310:CDS | 50.0% | |
| CATTGATGCTAGAGAGGGCA+TGG | + | chr6.2:10360055-10360074 | MS.gene018310:intron | 50.0% | |
| CTCCTTCCTACATAATCCCC+GGG | - | chr6.2:10359742-10359761 | None:intergenic | 50.0% | |
| CTCTCTTATGGCCTCACTCT+AGG | - | chr6.2:10363055-10363074 | None:intergenic | 50.0% | |
| GAATCGGACAACGGAAAGAG+CGG | - | chr6.2:10358730-10358749 | None:intergenic | 50.0% | |
| GAGACTGCAACAGAGAGAAC+TGG | - | chr6.2:10362923-10362942 | None:intergenic | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+AGG | - | chr6.2:10361282-10361301 | None:intergenic | 50.0% | |
| GCAGCCAAATGAAAAGCCTG+CGG | + | chr6.2:10361838-10361857 | MS.gene018310:CDS | 50.0% | |
| GGGTGTTTGGTCAGCATCAA+TGG | + | chr6.2:10364084-10364103 | MS.gene018310:CDS | 50.0% | |
| GTAACAACTCGCTTGAGTCC+TGG | - | chr6.2:10361095-10361114 | None:intergenic | 50.0% | |
| GTGAGGCCATAAGAGAGACT+AGG | + | chr6.2:10363058-10363077 | MS.gene018310:intron | 50.0% | |
| GTGCAGTCATCACACTGATC+GGG | + | chr6.2:10364064-10364083 | MS.gene018310:intron | 50.0% | |
| TACATCTTCAATCGCACCGC+AGG | - | chr6.2:10361857-10361876 | None:intergenic | 50.0% | |
| TACTGGACATGCCTGCTGTT+GGG | + | chr6.2:10363393-10363412 | MS.gene018310:CDS | 50.0% | |
| TATGGGAAAGTGGTTGGAGC+TGG | + | chr6.2:10360296-10360315 | MS.gene018310:CDS | 50.0% | |
| TCAGCGAACTGCCAAACCTT+GGG | - | chr6.2:10364608-10364627 | None:intergenic | 50.0% | |
| TCCTTCCTACATAATCCCCG+GGG | - | chr6.2:10359741-10359760 | None:intergenic | 50.0% | |
| TGATGCAACAGTGGTTGGGT+TGG | + | chr6.2:10359989-10360008 | MS.gene018310:intron | 50.0% | |
| TGGAAGGTTGGATGGAAGAG+TGG | + | chr6.2:10359103-10359122 | MS.gene018310:intron | 50.0% | |
| TGTAGCTGACCCCACTTAGT+AGG | + | chr6.2:10359908-10359927 | MS.gene018310:intron | 50.0% | |
| TTACTGGACATGCCTGCTGT+TGG | + | chr6.2:10363392-10363411 | MS.gene018310:CDS | 50.0% | |
| ! | GAGGGCATGGGAAAAGTTGA+AGG | + | chr6.2:10360068-10360087 | MS.gene018310:intron | 50.0% |
| ! | GATCTCAGCTCTGATGGATC+TGG | + | chr6.2:10363689-10363708 | MS.gene018310:CDS | 50.0% |
| ! | TCACAGCGATTCCACTGGTT+CGG | - | chr6.2:10362806-10362825 | None:intergenic | 50.0% |
| !! | AGATGGTGGAAACTGGGCTT+AGG | + | chr6.2:10359692-10359711 | MS.gene018310:intron | 50.0% |
| !! | GAAGGCACCTGACGTATTTC+AGG | + | chr6.2:10362497-10362516 | MS.gene018310:CDS | 50.0% |
| !! | GGGTGTCATTGATGCTAGAG+AGG | + | chr6.2:10360049-10360068 | MS.gene018310:intron | 50.0% |
| AGAAGCCCCGGGGATTATGT+AGG | + | chr6.2:10359733-10359752 | MS.gene018310:intron | 55.0% | |
| AGGCAAGCTCAGAGGCGAAT+CGG | - | chr6.2:10358746-10358765 | None:intergenic | 55.0% | |
| ATTCGCCTCTGAGCTTGCCT+GGG | + | chr6.2:10358746-10358765 | MS.gene018310:CDS | 55.0% | |
| CTAGCGAGGTCATGGCTTCA+TGG | - | chr6.2:10363100-10363119 | None:intergenic | 55.0% | |
| CTCAGAGGCGAATCGGACAA+CGG | - | chr6.2:10358739-10358758 | None:intergenic | 55.0% | |
| GGAAAGAGCGGCGTCTTCTT+CGG | - | chr6.2:10358718-10358737 | None:intergenic | 55.0% | |
| GGTGAGAGATTCCGAACCAG+TGG | + | chr6.2:10362792-10362811 | MS.gene018310:intron | 55.0% | |
| TTCAAAGGATGAGACGCGGC+AGG | - | chr6.2:10362892-10362911 | None:intergenic | 55.0% | |
| TTCTCCAGTTGCCCAACAGC+AGG | - | chr6.2:10363407-10363426 | None:intergenic | 55.0% | |
| ! | CGCACCGCAGGCTTTTCATT+TGG | - | chr6.2:10361845-10361864 | None:intergenic | 55.0% |
| ! | TTTTTGTGGGGTCGTGGCTC+TGG | + | chr6.2:10359182-10359201 | MS.gene018310:intron | 55.0% |
| ATCAGCCCAGGCAAGCTCAG+AGG | - | chr6.2:10358754-10358773 | None:intergenic | 60.0% | |
| CATGCCTGCTGTTGGGCAAC+TGG | + | chr6.2:10363400-10363419 | MS.gene018310:CDS | 60.0% | |
| GATTCGCCTCTGAGCTTGCC+TGG | + | chr6.2:10358745-10358764 | MS.gene018310:CDS | 60.0% | |
| GCCCCGGGGATTATGTAGGA+AGG | + | chr6.2:10359737-10359756 | MS.gene018310:intron | 60.0% | |
| GCGGCGTCTTCTTCGGAAGT+AGG | - | chr6.2:10358711-10358730 | None:intergenic | 60.0% | |
| TGAGACGCGGCAGGTAGAAG+TGG | - | chr6.2:10362883-10362902 | None:intergenic | 60.0% | |
| TGCCAAACCTTGGGCTGCCT+GGG | - | chr6.2:10364599-10364618 | None:intergenic | 60.0% | |
| CTGCCAAACCTTGGGCTGCC+TGG | - | chr6.2:10364600-10364619 | None:intergenic | 65.0% | |
| GAGCTTGCCTGGGCTGATGC+TGG | + | chr6.2:10358756-10358775 | MS.gene018310:CDS | 65.0% | |
| GTCCCAGGCAGCCCAAGGTT+TGG | + | chr6.2:10364594-10364613 | MS.gene018310:CDS | 65.0% | |
| CTCGGGACCAGCATCAGCCC+AGG | - | chr6.2:10358766-10358785 | None:intergenic | 70.0% | |
| CTGGGCTGATGCTGGTCCCG+AGG | + | chr6.2:10358764-10358783 | MS.gene018310:CDS | 70.0% | |
| GATGGGTCCCAGGCAGCCCA+AGG | + | chr6.2:10364589-10364608 | MS.gene018310:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 10358693 | 10364627 | 10358693 | ID=MS.gene018310 |
| chr6.2 | mRNA | 10358693 | 10364627 | 10358693 | ID=MS.gene018310.t1;Parent=MS.gene018310 |
| chr6.2 | exon | 10358693 | 10358785 | 10358693 | ID=MS.gene018310.t1.exon1;Parent=MS.gene018310.t1 |
| chr6.2 | CDS | 10358693 | 10358785 | 10358693 | ID=cds.MS.gene018310.t1;Parent=MS.gene018310.t1 |
| chr6.2 | exon | 10360243 | 10360372 | 10360243 | ID=MS.gene018310.t1.exon2;Parent=MS.gene018310.t1 |
| chr6.2 | CDS | 10360243 | 10360372 | 10360243 | ID=cds.MS.gene018310.t1;Parent=MS.gene018310.t1 |
| chr6.2 | exon | 10361735 | 10361873 | 10361735 | ID=MS.gene018310.t1.exon3;Parent=MS.gene018310.t1 |
| chr6.2 | CDS | 10361735 | 10361873 | 10361735 | ID=cds.MS.gene018310.t1;Parent=MS.gene018310.t1 |
| chr6.2 | exon | 10361963 | 10362175 | 10361963 | ID=MS.gene018310.t1.exon4;Parent=MS.gene018310.t1 |
| chr6.2 | CDS | 10361963 | 10362175 | 10361963 | ID=cds.MS.gene018310.t1;Parent=MS.gene018310.t1 |
| chr6.2 | exon | 10362380 | 10362518 | 10362380 | ID=MS.gene018310.t1.exon5;Parent=MS.gene018310.t1 |
| chr6.2 | CDS | 10362380 | 10362518 | 10362380 | ID=cds.MS.gene018310.t1;Parent=MS.gene018310.t1 |
| chr6.2 | exon | 10363386 | 10363536 | 10363386 | ID=MS.gene018310.t1.exon6;Parent=MS.gene018310.t1 |
| chr6.2 | CDS | 10363386 | 10363536 | 10363386 | ID=cds.MS.gene018310.t1;Parent=MS.gene018310.t1 |
| chr6.2 | exon | 10363639 | 10363748 | 10363639 | ID=MS.gene018310.t1.exon7;Parent=MS.gene018310.t1 |
| chr6.2 | CDS | 10363639 | 10363748 | 10363639 | ID=cds.MS.gene018310.t1;Parent=MS.gene018310.t1 |
| chr6.2 | exon | 10363824 | 10363921 | 10363824 | ID=MS.gene018310.t1.exon8;Parent=MS.gene018310.t1 |
| chr6.2 | CDS | 10363824 | 10363921 | 10363824 | ID=cds.MS.gene018310.t1;Parent=MS.gene018310.t1 |
| chr6.2 | exon | 10364070 | 10364139 | 10364070 | ID=MS.gene018310.t1.exon9;Parent=MS.gene018310.t1 |
| chr6.2 | CDS | 10364070 | 10364139 | 10364070 | ID=cds.MS.gene018310.t1;Parent=MS.gene018310.t1 |
| chr6.2 | exon | 10364538 | 10364627 | 10364538 | ID=MS.gene018310.t1.exon10;Parent=MS.gene018310.t1 |
| chr6.2 | CDS | 10364538 | 10364627 | 10364538 | ID=cds.MS.gene018310.t1;Parent=MS.gene018310.t1 |
| Gene Sequence |
| Protein sequence |
