Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018309.t1 | RHN50194.1 | 98 | 410 | 8 | 0 | 26 | 435 | 1 | 410 | 2.30E-223 | 784.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018309.t1 | Q54KZ8 | 35.2 | 349 | 214 | 7 | 81 | 423 | 50 | 392 | 1.9e-56 | 221.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018309.t1 | A0A396HEF3 | 98.0 | 410 | 8 | 0 | 26 | 435 | 1 | 410 | 1.7e-223 | 784.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene018309 | MS.gene42526 | PPI |
| MS.gene018309 | MS.gene057321 | PPI |
| MS.gene018309 | MS.gene72510 | PPI |
| MS.gene018309 | MS.gene77710 | PPI |
| MS.gene018309 | MS.gene85021 | PPI |
| MS.gene008080 | MS.gene018309 | PPI |
| MS.gene018309 | MS.gene86150 | PPI |
| MS.gene018309 | MS.gene017884 | PPI |
| MS.gene018309 | MS.gene018310 | PPI |
| MS.gene018309 | MS.gene045655 | PPI |
| MS.gene018309 | MS.gene69249 | PPI |
| MS.gene018309 | MS.gene29609 | PPI |
| MS.gene80663 | MS.gene018309 | PPI |
| MS.gene018309 | MS.gene80792 | PPI |
| MS.gene018309 | MS.gene37293 | PPI |
| MS.gene56673 | MS.gene018309 | PPI |
| MS.gene018309 | MS.gene031997 | PPI |
| MS.gene42526 | MS.gene018309 | PPI |
| MS.gene018309 | MS.gene014112 | PPI |
| MS.gene018309 | MS.gene39043 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018309.t1 | MTR_6g015395 | 97.561 | 410 | 10 | 0 | 26 | 435 | 1 | 410 | 0.0 | 832 |
| MS.gene018309.t1 | MTR_7g091480 | 97.073 | 410 | 12 | 0 | 26 | 435 | 1 | 410 | 0.0 | 820 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018309.t1 | AT5G15610 | 68.039 | 413 | 129 | 1 | 26 | 435 | 1 | 413 | 0.0 | 598 |
| MS.gene018309.t1 | AT3G02200 | 65.228 | 417 | 138 | 1 | 26 | 435 | 1 | 417 | 0.0 | 582 |
| MS.gene018309.t1 | AT5G15610 | 63.575 | 442 | 129 | 2 | 26 | 435 | 1 | 442 | 0.0 | 581 |
| MS.gene018309.t1 | AT3G02200 | 66.116 | 363 | 123 | 0 | 26 | 388 | 1 | 363 | 0.0 | 513 |
Find 86 sgRNAs with CRISPR-Local
Find 351 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATTCCTTATGAACTTATT+AGG | 0.125836 | 6.2:+10373767 | MS.gene018309:CDS |
| TTCTTGAAAGAGTGGAAAAT+TGG | 0.210478 | 6.2:+10372146 | MS.gene018309:CDS |
| TAATAAGTTCATAAGGAATT+TGG | 0.226927 | 6.2:-10373765 | None:intergenic |
| CTGATATAACAGACCATATT+TGG | 0.228059 | 6.2:-10373485 | None:intergenic |
| GAAGGCACCTGACGTATTTC+AGG | 0.250708 | 6.2:+10372550 | MS.gene018309:CDS |
| CTACATGAAGGCATTGAATT+TGG | 0.253476 | 6.2:+10372067 | MS.gene018309:CDS |
| CATGTTGCAGTGTGATTTAC+TGG | 0.258669 | 6.2:+10373429 | MS.gene018309:intron |
| GATCAATTTGTATAATCTTT+TGG | 0.267985 | 6.2:+10372019 | MS.gene018309:CDS |
| CTGCCAAACCTTGGGCTGCC+TGG | 0.287603 | 6.2:-10374650 | None:intergenic |
| GATTCGCCTCTGAGCTTGCC+TGG | 0.291138 | 6.2:+10368796 | MS.gene018309:CDS |
| AATTCCTTATGAACTTATTA+GGG | 0.303697 | 6.2:+10373768 | MS.gene018309:CDS |
| TCCACCTTATTGAATGACTA+TGG | 0.328479 | 6.2:+10373568 | MS.gene018309:CDS |
| CAAGGACAACTTGATTCATT+TGG | 0.340745 | 6.2:-10373948 | None:intergenic |
| CCCATCTTCTGATACTTTGT+TGG | 0.341074 | 6.2:-10374625 | None:intergenic |
| ACAATCTCCATGACTTCATC+TGG | 0.341158 | 6.2:-10371841 | None:intergenic |
| CATGCCTGCTGTTGGGCAAC+TGG | 0.343731 | 6.2:+10373453 | MS.gene018309:CDS |
| TTTACCATAGTCATTCAATA+AGG | 0.369504 | 6.2:-10373572 | None:intergenic |
| TGAATCAAGTTGTCCTTGTT+AGG | 0.370330 | 6.2:+10373953 | MS.gene018309:CDS |
| GAGCTTGCCTGGGCTGATGC+TGG | 0.382511 | 6.2:+10368807 | MS.gene018309:CDS |
| ATGATGATGAAGTTGAACTA+TGG | 0.393896 | 6.2:+10373881 | MS.gene018309:CDS |
| GCATTGAATTTGGCTGTTGA+TGG | 0.394749 | 6.2:+10372077 | MS.gene018309:CDS |
| ACTTATTAGGGACACACTTC+AGG | 0.395673 | 6.2:+10373780 | MS.gene018309:CDS |
| TGCCAAACCTTGGGCTGCCT+GGG | 0.396092 | 6.2:-10374649 | None:intergenic |
| TAGACATAAAACTGGCAGTA+TGG | 0.404837 | 6.2:-10372047 | None:intergenic |
| TACTGGACATGCCTGCTGTT+GGG | 0.410514 | 6.2:+10373446 | MS.gene018309:CDS |
| TCAAGTTAGCAGACTTTGCT+TGG | 0.414784 | 6.2:+10370305 | MS.gene018309:CDS |
| TGATACTTTGTTGGCCTGAA+TGG | 0.415532 | 6.2:-10374616 | None:intergenic |
| CATCACACTGATCGGGTGTT+TGG | 0.417804 | 6.2:+10374124 | MS.gene018309:CDS |
| AAATGTGATCAGTACCATTC+AGG | 0.428425 | 6.2:+10374602 | MS.gene018309:CDS |
| CTGGAGAATGATGCCAAATA+TGG | 0.429289 | 6.2:+10373472 | MS.gene018309:CDS |
| GTCCCAGGCAGCCCAAGGTT+TGG | 0.430791 | 6.2:+10374647 | MS.gene018309:CDS |
| GGAAAGAGCGGCGTCTTCTT+CGG | 0.432130 | 6.2:-10368766 | None:intergenic |
| CCTTCATGTAGACATAAAAC+TGG | 0.439865 | 6.2:-10372055 | None:intergenic |
| GGCTGAAGAATTCATTGCTA+TGG | 0.447568 | 6.2:+10370329 | MS.gene018309:CDS |
| AGAAACAGCTCTCTATGTTC+TGG | 0.452737 | 6.2:-10372173 | None:intergenic |
| GATCTCAGCTCTGATGGATC+TGG | 0.452853 | 6.2:+10373742 | MS.gene018309:CDS |
| GGGTGTTTGGTCAGCATCAA+TGG | 0.455622 | 6.2:+10374137 | MS.gene018309:CDS |
| TTGGTTGATCTCAGCTCTGA+TGG | 0.460760 | 6.2:+10373736 | MS.gene018309:CDS |
| CTCAGCGAACTGCCAAACCT+TGG | 0.465528 | 6.2:-10374659 | None:intergenic |
| TCTTGAAAGAGTGGAAAATT+GGG | 0.466987 | 6.2:+10372147 | MS.gene018309:CDS |
| ATTCGCCTCTGAGCTTGCCT+GGG | 0.468400 | 6.2:+10368797 | MS.gene018309:CDS |
| TCAGCGAACTGCCAAACCTT+GGG | 0.470820 | 6.2:-10374658 | None:intergenic |
| CATTGCTATGGGAAAGTGGT+TGG | 0.477727 | 6.2:+10370341 | MS.gene018309:CDS |
| ATTGCAGATAATAGTGAAGA+TGG | 0.482900 | 6.2:-10371797 | None:intergenic |
| AGGCAAGCTCAGAGGCGAAT+CGG | 0.484064 | 6.2:-10368794 | None:intergenic |
| GTGTCCCTAATAAGTTCATA+AGG | 0.487262 | 6.2:-10373772 | None:intergenic |
| GCCAACAAAGTATCAGAAGA+TGG | 0.494239 | 6.2:+10374624 | MS.gene018309:CDS |
| TTACTGGACATGCCTGCTGT+TGG | 0.496081 | 6.2:+10373445 | MS.gene018309:CDS |
| TTCTCCAGTTGCCCAACAGC+AGG | 0.499064 | 6.2:-10373457 | None:intergenic |
| TACATCTTCAATCGCACCGC+AGG | 0.502707 | 6.2:-10371907 | None:intergenic |
| CAATGCATTCTTCATGCACA+AGG | 0.504463 | 6.2:-10373693 | None:intergenic |
| TTCCTTCAAAACATTAGAGA+TGG | 0.510695 | 6.2:-10372198 | None:intergenic |
| CTCGGGACCAGCATCAGCCC+AGG | 0.516732 | 6.2:-10368814 | None:intergenic |
| GCGGCGTCTTCTTCGGAAGT+AGG | 0.526498 | 6.2:-10368759 | None:intergenic |
| GAACAAAGCTAGTGACTTGG+AGG | 0.528393 | 6.2:+10374170 | MS.gene018309:CDS |
| TGTGCAGTCATCACACTGAT+CGG | 0.531347 | 6.2:+10374116 | MS.gene018309:intron |
| AGTAGGAACCACCGTCGTCA+TGG | 0.531600 | 6.2:-10368742 | None:intergenic |
| AATTCATTGCTATGGGAAAG+TGG | 0.536465 | 6.2:+10370337 | MS.gene018309:CDS |
| ATTTCACAGACAGTGTATAG+TGG | 0.539271 | 6.2:-10368669 | None:intergenic |
| GTGCAGTCATCACACTGATC+GGG | 0.542885 | 6.2:+10374117 | MS.gene018309:intron |
| ACCATAGTCATTCAATAAGG+TGG | 0.547992 | 6.2:-10373569 | None:intergenic |
| GCTGAAGAATTCATTGCTAT+GGG | 0.548812 | 6.2:+10370330 | MS.gene018309:CDS |
| CAAGTTACCTGAAATACGTC+AGG | 0.554665 | 6.2:-10372557 | None:intergenic |
| CGTCGTCATGGTTGTTTGTG+CGG | 0.555767 | 6.2:-10368730 | None:intergenic |
| TGAGAATCCAGATGAAGTCA+TGG | 0.556784 | 6.2:+10371834 | MS.gene018309:CDS |
| AGTTAGCAGACTTTGCTTGG+AGG | 0.561124 | 6.2:+10370308 | MS.gene018309:CDS |
| AAAGTTAATTGACTGTAAGA+TGG | 0.565834 | 6.2:+10373924 | MS.gene018309:CDS |
| TCGATAGCTTCTTGAAAGAG+TGG | 0.566129 | 6.2:+10372138 | MS.gene018309:CDS |
| TGATGATGAAGTTGAACTAT+GGG | 0.573567 | 6.2:+10373882 | MS.gene018309:CDS |
| AGTATCAGAAGATGGGTCCC+AGG | 0.578337 | 6.2:+10374632 | MS.gene018309:CDS |
| TATGGGAAAGTGGTTGGAGC+TGG | 0.579039 | 6.2:+10370347 | MS.gene018309:CDS |
| CCAACAAAGTATCAGAAGAT+GGG | 0.582224 | 6.2:+10374625 | MS.gene018309:CDS |
| GATGGGTCCCAGGCAGCCCA+AGG | 0.586592 | 6.2:+10374642 | MS.gene018309:CDS |
| CTGGGCTGATGCTGGTCCCG+AGG | 0.590869 | 6.2:+10368815 | MS.gene018309:CDS |
| TGAGAACAAAGCTAGTGACT+TGG | 0.607952 | 6.2:+10374167 | MS.gene018309:CDS |
| AAGCAAAGTCTGCTAACTTG+AGG | 0.611744 | 6.2:-10370303 | None:intergenic |
| ATCAGCCCAGGCAAGCTCAG+AGG | 0.615538 | 6.2:-10368802 | None:intergenic |
| GAGATGCAACATACCTAACA+AGG | 0.623749 | 6.2:-10373966 | None:intergenic |
| CTCAGAGGCGAATCGGACAA+CGG | 0.624823 | 6.2:-10368787 | None:intergenic |
| GAATCGGACAACGGAAAGAG+CGG | 0.648134 | 6.2:-10368778 | None:intergenic |
| AAGTAGCAAGATAATTGGTG+AGG | 0.654137 | 6.2:-10372457 | None:intergenic |
| CGCACAAACAACCATGACGA+CGG | 0.654703 | 6.2:+10368731 | MS.gene018309:CDS |
| CAAGGTTTGGCAGTTCGCTG+AGG | 0.660482 | 6.2:+10374660 | MS.gene018309:CDS |
| AACAAAGCTAGTGACTTGGA+GGG | 0.674755 | 6.2:+10374171 | MS.gene018309:CDS |
| GCAGCCAAATGAAAAGCCTG+CGG | 0.678328 | 6.2:+10371891 | MS.gene018309:CDS |
| ACAAACAACCATGACGACGG+TGG | 0.690644 | 6.2:+10368734 | MS.gene018309:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+AGG | - | chr6.2:10370654-10370635 | None:intergenic | 0.0% |
| !! | ATATAATTTATAGATTCAAT+TGG | + | chr6.2:10369134-10369153 | MS.gene018309:intron | 10.0% |
| !! | ATATATATATATATATGAGA+AGG | + | chr6.2:10370671-10370690 | MS.gene018309:intron | 10.0% |
| !! | TAATTTAATTGTTATATATG+TGG | - | chr6.2:10374310-10374329 | None:intergenic | 10.0% |
| !! | TATATATATATATATGAGAA+GGG | + | chr6.2:10370672-10370691 | MS.gene018309:intron | 10.0% |
| !! | TTAATTACTAATAATACATA+TGG | + | chr6.2:10370774-10370793 | MS.gene018309:intron | 10.0% |
| !!! | CTTTCTTTTAAATAAAATTA+AGG | + | chr6.2:10369423-10369442 | MS.gene018309:intron | 10.0% |
| !!! | TTTATCTTAATCTTTAAAAT+CGG | + | chr6.2:10373203-10373222 | MS.gene018309:intron | 10.0% |
| !!! | TTTTTTAATTTGATTGTTTT+TGG | + | chr6.2:10369297-10369316 | MS.gene018309:intron | 10.0% |
| !! | AAAAAAATACCTGTATTATA+GGG | - | chr6.2:10374272-10374291 | None:intergenic | 15.0% |
| !! | ATTAATTAGAAATAATTCCT+AGG | - | chr6.2:10371233-10371252 | None:intergenic | 15.0% |
| !! | ATTATTTCATCAAAACATTT+AGG | - | chr6.2:10373663-10373682 | None:intergenic | 15.0% |
| !! | TCTATATAATTGATTGTAAA+TGG | + | chr6.2:10369265-10369284 | MS.gene018309:intron | 15.0% |
| !! | TGAATTTATTAGTATTATCT+TGG | + | chr6.2:10370263-10370282 | MS.gene018309:intron | 15.0% |
| !!! | AACTTGTATTTTATATACTT+TGG | + | chr6.2:10372798-10372817 | MS.gene018309:intron | 15.0% |
| !!! | AATATCAATTTTTCTCTTAT+AGG | + | chr6.2:10372764-10372783 | MS.gene018309:intron | 15.0% |
| !!! | ATCTCTTTTTTTTTTTTTGA+GGG | + | chr6.2:10370505-10370524 | MS.gene018309:intron | 15.0% |
| !!! | TATCTCTTTTTTTTTTTTTG+AGG | + | chr6.2:10370504-10370523 | MS.gene018309:intron | 15.0% |
| !!! | TGAATATATTCAATTTTACA+GGG | - | chr6.2:10374347-10374366 | None:intergenic | 15.0% |
| !!! | TTTTTAAATTAATACCTTCT+AGG | - | chr6.2:10370860-10370879 | None:intergenic | 15.0% |
| !! | AAACATAATATCTTCTCAAA+AGG | + | chr6.2:10372662-10372681 | MS.gene018309:intron | 20.0% |
| !! | AAATTCCTTATGAACTTATT+AGG | + | chr6.2:10373767-10373786 | MS.gene018309:CDS | 20.0% |
| !! | AATAACAGATATTGTAAACA+CGG | - | chr6.2:10371757-10371776 | None:intergenic | 20.0% |
| !! | AATAACTATGATTGAATGTA+GGG | - | chr6.2:10372629-10372648 | None:intergenic | 20.0% |
| !! | AATTCCTTATGAACTTATTA+GGG | + | chr6.2:10373768-10373787 | MS.gene018309:CDS | 20.0% |
| !! | AATTTATAGATTCAATTGGA+AGG | + | chr6.2:10369138-10369157 | MS.gene018309:intron | 20.0% |
| !! | ATAATTGATTGTAAATGGTT+TGG | + | chr6.2:10369270-10369289 | MS.gene018309:intron | 20.0% |
| !! | CAAAAAAATACCTGTATTAT+AGG | - | chr6.2:10374273-10374292 | None:intergenic | 20.0% |
| !! | CTGTAAAATTGAATATATTC+AGG | + | chr6.2:10374346-10374365 | MS.gene018309:intron | 20.0% |
| !! | GTGTTGTATATAAATGAAAT+TGG | + | chr6.2:10368940-10368959 | MS.gene018309:intron | 20.0% |
| !! | TAATAACTATGATTGAATGT+AGG | - | chr6.2:10372630-10372649 | None:intergenic | 20.0% |
| !! | TAATAAGTTCATAAGGAATT+TGG | - | chr6.2:10373768-10373787 | None:intergenic | 20.0% |
| !! | TACTAATAATACATATGGTA+AGG | + | chr6.2:10370779-10370798 | MS.gene018309:intron | 20.0% |
| !! | TTAGTATTATTCAAATTCTG+AGG | + | chr6.2:10373294-10373313 | MS.gene018309:intron | 20.0% |
| !!! | AACCTAAAAAATTATCGATT+TGG | - | chr6.2:10368859-10368878 | None:intergenic | 20.0% |
| !!! | AATGGGCTTTTATTTTTTTT+GGG | + | chr6.2:10370072-10370091 | MS.gene018309:intron | 20.0% |
| !!! | ACCTAAAAAATTATCGATTT+GGG | - | chr6.2:10368858-10368877 | None:intergenic | 20.0% |
| !!! | AGTTTCTCTTATAATTTTCT+AGG | - | chr6.2:10369862-10369881 | None:intergenic | 20.0% |
| !!! | ATTATGAGTGATGAATTTTT+GGG | + | chr6.2:10371721-10371740 | MS.gene018309:intron | 20.0% |
| !!! | ATTATTTTTGTTCGATTTGT+AGG | + | chr6.2:10374569-10374588 | MS.gene018309:intron | 20.0% |
| !!! | ATTTTGTTTTTACTTCTCTT+TGG | + | chr6.2:10372270-10372289 | MS.gene018309:intron | 20.0% |
| !!! | CTGAATATATTCAATTTTAC+AGG | - | chr6.2:10374348-10374367 | None:intergenic | 20.0% |
| !!! | GATCAATTTGTATAATCTTT+TGG | + | chr6.2:10372019-10372038 | MS.gene018309:CDS | 20.0% |
| !!! | TAGTATTATCTTGGTTTTTT+AGG | + | chr6.2:10370272-10370291 | MS.gene018309:intron | 20.0% |
| !!! | TATTATGAGTGATGAATTTT+TGG | + | chr6.2:10371720-10371739 | MS.gene018309:intron | 20.0% |
| !!! | TTATTTTTGTTCGATTTGTA+GGG | + | chr6.2:10374570-10374589 | MS.gene018309:intron | 20.0% |
| !!! | TTCTCAAAAATTTCTGAAAA+AGG | + | chr6.2:10370402-10370421 | MS.gene018309:CDS | 20.0% |
| !!! | TTGATGAAATAATGTTGTTT+AGG | + | chr6.2:10373670-10373689 | MS.gene018309:intron | 20.0% |
| !!! | TTTTTTCCTTCATTTTTTGT+GGG | + | chr6.2:10369220-10369239 | MS.gene018309:intron | 20.0% |
| !!! | TTTTTTTCCTTCATTTTTTG+TGG | + | chr6.2:10369219-10369238 | MS.gene018309:intron | 20.0% |
| ! | AAAAATGAGATTGATGTCAT+TGG | + | chr6.2:10373717-10373736 | MS.gene018309:CDS | 25.0% |
| ! | AAAGTTAATTGACTGTAAGA+TGG | + | chr6.2:10373924-10373943 | MS.gene018309:CDS | 25.0% |
| ! | AAGAATTAATGGTCAAGATT+TGG | + | chr6.2:10371272-10371291 | MS.gene018309:intron | 25.0% |
| ! | AAGAATTAATGGTCAAGATT+TGG | - | chr6.2:10371291-10371272 | None:intergenic | 25.0% |
| ! | AGAAAAAGTAGCAAGATAAT+TGG | - | chr6.2:10372465-10372484 | None:intergenic | 25.0% |
| ! | ATAACTATGATTGAATGTAG+GGG | - | chr6.2:10372628-10372647 | None:intergenic | 25.0% |
| ! | ATATATATATATAGGACAGC+TGG | - | chr6.2:10370627-10370646 | None:intergenic | 25.0% |
| ! | ATCCTAATTCTTTGATGTTA+TGG | + | chr6.2:10371031-10371050 | MS.gene018309:intron | 25.0% |
| ! | ATCTAATTGTCAGATTCAAT+TGG | + | chr6.2:10369465-10369484 | MS.gene018309:intron | 25.0% |
| ! | ATGTAATATTACATCCTACT+TGG | + | chr6.2:10371925-10371944 | MS.gene018309:intron | 25.0% |
| ! | ATGTTTCACAGATAATTGAT+TGG | + | chr6.2:10371692-10371711 | MS.gene018309:intron | 25.0% |
| ! | CAACATAAGTTTATTGTCAT+CGG | + | chr6.2:10372309-10372328 | MS.gene018309:intron | 25.0% |
| ! | CACCAAAACAATCAAAAAAA+TGG | - | chr6.2:10372829-10372848 | None:intergenic | 25.0% |
| ! | GAAATGATACAACAGTAATT+GGG | + | chr6.2:10369494-10369513 | MS.gene018309:intron | 25.0% |
| ! | TCAAAATTTCAAAACCAAGT+AGG | - | chr6.2:10371942-10371961 | None:intergenic | 25.0% |
| ! | TCATAATTCATTGATGTTGA+AGG | + | chr6.2:10371093-10371112 | MS.gene018309:intron | 25.0% |
| ! | TGAAATGATACAACAGTAAT+TGG | + | chr6.2:10369493-10369512 | MS.gene018309:intron | 25.0% |
| ! | TGATATTACAAGATGATAGA+CGG | - | chr6.2:10372751-10372770 | None:intergenic | 25.0% |
| ! | TTAACAAAATTAAGACAGCT+TGG | - | chr6.2:10370483-10370502 | None:intergenic | 25.0% |
| ! | TTATCTGTGAAACATCAAAT+TGG | - | chr6.2:10371687-10371706 | None:intergenic | 25.0% |
| ! | TTTACCATAGTCATTCAATA+AGG | - | chr6.2:10373575-10373594 | None:intergenic | 25.0% |
| !! | ATTTTCTGAACATCTCAAAT+TGG | - | chr6.2:10369111-10369130 | None:intergenic | 25.0% |
| !! | CAAAAATTTCTGAAAAAGGT+AGG | + | chr6.2:10370406-10370425 | MS.gene018309:intron | 25.0% |
| !! | GAATTGATGTTATTTGTGAA+CGG | + | chr6.2:10370200-10370219 | MS.gene018309:intron | 25.0% |
| !! | TCTTTTTAAACGATTGAGAA+TGG | + | chr6.2:10370918-10370937 | MS.gene018309:intron | 25.0% |
| !! | TTGAAAATGATTTTGCAACT+CGG | - | chr6.2:10372893-10372912 | None:intergenic | 25.0% |
| !! | TTGTTGATAGATTCAATTGA+AGG | + | chr6.2:10369996-10370015 | MS.gene018309:intron | 25.0% |
| !!! | AAAAATTATCGATTTGGGAA+TGG | - | chr6.2:10368853-10368872 | None:intergenic | 25.0% |
| !!! | AAAATTATCGATTTGGGAAT+GGG | - | chr6.2:10368852-10368871 | None:intergenic | 25.0% |
| !!! | AATTATCTTGCTACTTTTTC+TGG | + | chr6.2:10372464-10372483 | MS.gene018309:CDS | 25.0% |
| !!! | AATTTGATTGTTTTTGGTGT+TGG | + | chr6.2:10369303-10369322 | MS.gene018309:intron | 25.0% |
| !!! | ATGTTTTGAAGGAAAACAAA+AGG | + | chr6.2:10372207-10372226 | MS.gene018309:CDS | 25.0% |
| !!! | CTTTTATTTTTTTTGGGTTG+GGG | + | chr6.2:10370078-10370097 | MS.gene018309:intron | 25.0% |
| !!! | GAATGGGCTTTTATTTTTTT+TGG | + | chr6.2:10370071-10370090 | MS.gene018309:intron | 25.0% |
| !!! | GCTTTTATTTTTTTTGGGTT+GGG | + | chr6.2:10370077-10370096 | MS.gene018309:intron | 25.0% |
| !!! | TCCCAAATCGATAATTTTTT+AGG | + | chr6.2:10368854-10368873 | MS.gene018309:intron | 25.0% |
| !!! | TGCCATTTTTTTGATTGTTT+TGG | + | chr6.2:10372824-10372843 | MS.gene018309:intron | 25.0% |
| !!! | TTTTAGGTTTTCGTGATTTT+GGG | + | chr6.2:10368870-10368889 | MS.gene018309:intron | 25.0% |
| !!! | TTTTATTTTTTTTGGGTTGG+GGG | + | chr6.2:10370079-10370098 | MS.gene018309:intron | 25.0% |
| !!! | TTTTGAGAAAATCAATTCAG+CGG | - | chr6.2:10370391-10370410 | None:intergenic | 25.0% |
| !!! | TTTTTAGGTTTTCGTGATTT+TGG | + | chr6.2:10368869-10368888 | MS.gene018309:intron | 25.0% |
| !!! | TTTTTCCTTCATTTTTTGTG+GGG | + | chr6.2:10369221-10369240 | MS.gene018309:intron | 25.0% |
| AAACAATTACCTCTTGTTCA+TGG | + | chr6.2:10370973-10370992 | MS.gene018309:intron | 30.0% | |
| AAAGTCTTAACCTACTAAGT+GGG | - | chr6.2:10369972-10369991 | None:intergenic | 30.0% | |
| AAATACTGTTCATGCACAAT+TGG | + | chr6.2:10373592-10373611 | MS.gene018309:intron | 30.0% | |
| AACAGTAATTGGGTTTAGAA+TGG | + | chr6.2:10369504-10369523 | MS.gene018309:intron | 30.0% | |
| AAGTAACTCAGTTGAAACAA+TGG | - | chr6.2:10374543-10374562 | None:intergenic | 30.0% | |
| AATTGTCAGATTCAATTGGA+AGG | + | chr6.2:10369469-10369488 | MS.gene018309:intron | 30.0% | |
| AGATTCAGAGATTAATGAGT+TGG | + | chr6.2:10369890-10369909 | MS.gene018309:intron | 30.0% | |
| ATAAAAATCGCATTCAGGAA+TGG | - | chr6.2:10374395-10374414 | None:intergenic | 30.0% | |
| ATTCATTGATGTTGAAGGAA+TGG | + | chr6.2:10371098-10371117 | MS.gene018309:intron | 30.0% | |
| ATTCGAAGTGTATACATTTC+TGG | + | chr6.2:10374444-10374463 | MS.gene018309:intron | 30.0% | |
| ATTGCAGATAATAGTGAAGA+TGG | - | chr6.2:10371800-10371819 | None:intergenic | 30.0% | |
| CAATTGTTACTGAATGCAAA+GGG | - | chr6.2:10371430-10371449 | None:intergenic | 30.0% | |
| CAGAACTGGATAATAAATTC+TGG | - | chr6.2:10371536-10371555 | None:intergenic | 30.0% | |
| CCTCAAGTTTAAACCTAATA+GGG | + | chr6.2:10370834-10370853 | MS.gene018309:intron | 30.0% | |
| CTCATTAATCTCTGAATCTT+TGG | - | chr6.2:10369889-10369908 | None:intergenic | 30.0% | |
| CTCCATAACATCAAAGAATT+AGG | - | chr6.2:10371036-10371055 | None:intergenic | 30.0% | |
| CTGATATAACAGACCATATT+TGG | - | chr6.2:10373488-10373507 | None:intergenic | 30.0% | |
| CTTGGTCTATATCTCTAATA+TGG | - | chr6.2:10370465-10370484 | None:intergenic | 30.0% | |
| TATAGATTCAATTGGAAGGT+TGG | + | chr6.2:10369142-10369161 | MS.gene018309:intron | 30.0% | |
| TATCTTCTCAAAAGGTGATA+AGG | + | chr6.2:10372670-10372689 | MS.gene018309:intron | 30.0% | |
| TATTCAGGAGCTAATTACTT+AGG | + | chr6.2:10374361-10374380 | MS.gene018309:intron | 30.0% | |
| TCAATTGTTACTGAATGCAA+AGG | - | chr6.2:10371431-10371450 | None:intergenic | 30.0% | |
| TCATCATCATTGATCTGAAA+GGG | - | chr6.2:10373871-10373890 | None:intergenic | 30.0% | |
| TCCTCAAGTTTAAACCTAAT+AGG | + | chr6.2:10370833-10370852 | MS.gene018309:intron | 30.0% | |
| TCTTGAAAGAGTGGAAAATT+GGG | + | chr6.2:10372147-10372166 | MS.gene018309:CDS | 30.0% | |
| TGAAAATTGTGCTTGTGATA+TGG | + | chr6.2:10369019-10369038 | MS.gene018309:intron | 30.0% | |
| TGATAGATTCAATTGAAGGT+TGG | + | chr6.2:10370000-10370019 | MS.gene018309:intron | 30.0% | |
| TTCATCATCATTGATCTGAA+AGG | - | chr6.2:10373872-10373891 | None:intergenic | 30.0% | |
| TTCATTGATGTTGAAGGAAT+GGG | + | chr6.2:10371099-10371118 | MS.gene018309:intron | 30.0% | |
| TTCCTTCAAAACATTAGAGA+TGG | - | chr6.2:10372201-10372220 | None:intergenic | 30.0% | |
| TTCTTGAAAGAGTGGAAAAT+TGG | + | chr6.2:10372146-10372165 | MS.gene018309:CDS | 30.0% | |
| TTTGCATTCAGTAACAATTG+AGG | + | chr6.2:10371430-10371449 | MS.gene018309:intron | 30.0% | |
| ! | ATGATGATGAAGTTGAACTA+TGG | + | chr6.2:10373881-10373900 | MS.gene018309:CDS | 30.0% |
| ! | ATTATCCAGTTCTGATAGTT+TGG | + | chr6.2:10371542-10371561 | MS.gene018309:intron | 30.0% |
| ! | CAATTTTTCTCTTATAGGCA+TGG | + | chr6.2:10372769-10372788 | MS.gene018309:intron | 30.0% |
| ! | CTATCGATCTTTTTGAATGA+AGG | - | chr6.2:10372125-10372144 | None:intergenic | 30.0% |
| ! | TCAAGATTTTTCTTACTCAG+AGG | + | chr6.2:10373512-10373531 | MS.gene018309:CDS | 30.0% |
| ! | TGATGATGAAGTTGAACTAT+GGG | + | chr6.2:10373882-10373901 | MS.gene018309:CDS | 30.0% |
| ! | TTTTTATCTCAGCATGTCAA+AGG | + | chr6.2:10372421-10372440 | MS.gene018309:intron | 30.0% |
| !! | AATCTTTAAAATCGGCAAGT+GGG | + | chr6.2:10373211-10373230 | MS.gene018309:intron | 30.0% |
| !! | TAATCTTTAAAATCGGCAAG+TGG | + | chr6.2:10373210-10373229 | MS.gene018309:intron | 30.0% |
| !! | TTGTATTTTTGCTGAATGTG+TGG | + | chr6.2:10369648-10369667 | MS.gene018309:intron | 30.0% |
| !! | TTTAGGTTTTCGTGATTTTG+GGG | + | chr6.2:10368871-10368890 | MS.gene018309:intron | 30.0% |
| !!! | GGCTTTTATTTTTTTTGGGT+TGG | + | chr6.2:10370076-10370095 | MS.gene018309:intron | 30.0% |
| !!! | TAACTCTTTTGAGTTACTCT+TGG | + | chr6.2:10371297-10371316 | MS.gene018309:intron | 30.0% |
| !!! | TAACTCTTTTGAGTTACTCT+TGG | - | chr6.2:10371316-10371297 | None:intergenic | 30.0% |
| !!! | TGCAATTGTTGATTTTGTGA+AGG | + | chr6.2:10372532-10372551 | MS.gene018309:CDS | 30.0% |
| !!! | TGGGTTGGAATTTTTTGAAT+GGG | + | chr6.2:10370055-10370074 | MS.gene018309:intron | 30.0% |
| !!! | TTGGGTTGGAATTTTTTGAA+TGG | + | chr6.2:10370054-10370073 | MS.gene018309:intron | 30.0% |
| !!! | TTTATTTTTTTTGGGTTGGG+GGG | + | chr6.2:10370080-10370099 | MS.gene018309:intron | 30.0% |
| !!! | TTTTTACTTCTCTTTGGAGT+AGG | + | chr6.2:10372276-10372295 | MS.gene018309:intron | 30.0% |
| AAATGTGATCAGTACCATTC+AGG | + | chr6.2:10374602-10374621 | MS.gene018309:CDS | 35.0% | |
| AAGAAATAGCTACAGCCATA+AGG | - | chr6.2:10374036-10374055 | None:intergenic | 35.0% | |
| AAGTAGCAAGATAATTGGTG+AGG | - | chr6.2:10372460-10372479 | None:intergenic | 35.0% | |
| AAGTCTTAACCTACTAAGTG+GGG | - | chr6.2:10369971-10369990 | None:intergenic | 35.0% | |
| AATGGGATGTTATGTTACCT+CGG | - | chr6.2:10368835-10368854 | None:intergenic | 35.0% | |
| AATTCATTGCTATGGGAAAG+TGG | + | chr6.2:10370337-10370356 | MS.gene018309:CDS | 35.0% | |
| ACATTTAGGTAGAAACACAG+TGG | - | chr6.2:10373649-10373668 | None:intergenic | 35.0% | |
| ACCATAGTCATTCAATAAGG+TGG | - | chr6.2:10373572-10373591 | None:intergenic | 35.0% | |
| AGTCACAAAAAGAAAGAGGT+TGG | - | chr6.2:10373030-10373049 | None:intergenic | 35.0% | |
| ATTTCACAGACAGTGTATAG+TGG | - | chr6.2:10368672-10368691 | None:intergenic | 35.0% | |
| CAAACTGTTATTAAGTGCTC+AGG | - | chr6.2:10374494-10374513 | None:intergenic | 35.0% | |
| CAAAGTCTTAACCTACTAAG+TGG | - | chr6.2:10369973-10369992 | None:intergenic | 35.0% | |
| CAAGCATAAAAATCGCATTC+AGG | - | chr6.2:10374400-10374419 | None:intergenic | 35.0% | |
| CAAGGACAACTTGATTCATT+TGG | - | chr6.2:10373951-10373970 | None:intergenic | 35.0% | |
| CCCTATTAGGTTTAAACTTG+AGG | - | chr6.2:10370837-10370856 | None:intergenic | 35.0% | |
| CCTTCATGTAGACATAAAAC+TGG | - | chr6.2:10372058-10372077 | None:intergenic | 35.0% | |
| CTTGAGGAAACCTTAGTTTA+AGG | - | chr6.2:10370821-10370840 | None:intergenic | 35.0% | |
| GAAACCTTAGTTTAAGGAGA+TGG | - | chr6.2:10370815-10370834 | None:intergenic | 35.0% | |
| GCTGAAGAATTCATTGCTAT+GGG | + | chr6.2:10370330-10370349 | MS.gene018309:CDS | 35.0% | |
| GTGTCCCTAATAAGTTCATA+AGG | - | chr6.2:10373775-10373794 | None:intergenic | 35.0% | |
| GTTGAGTCACAAAAAGAAAG+AGG | - | chr6.2:10373034-10373053 | None:intergenic | 35.0% | |
| TACTCCATCTCCTTAAACTA+AGG | + | chr6.2:10370808-10370827 | MS.gene018309:intron | 35.0% | |
| TAGACATAAAACTGGCAGTA+TGG | - | chr6.2:10372050-10372069 | None:intergenic | 35.0% | |
| TCATAGTTATTAGTTGCAGC+TGG | + | chr6.2:10372638-10372657 | MS.gene018309:intron | 35.0% | |
| TCCACCTTATTGAATGACTA+TGG | + | chr6.2:10373568-10373587 | MS.gene018309:CDS | 35.0% | |
| TGCAACGTTTGAATTATGCT+AGG | - | chr6.2:10373845-10373864 | None:intergenic | 35.0% | |
| TGTTGTGGATATATGACTAC+TGG | - | chr6.2:10372352-10372371 | None:intergenic | 35.0% | |
| TTAGGGAATGTGAAAGTTGA+AGG | + | chr6.2:10369588-10369607 | MS.gene018309:intron | 35.0% | |
| TTCAACCAAACTATCAGAAC+TGG | - | chr6.2:10371550-10371569 | None:intergenic | 35.0% | |
| TTGGATTGTGTGATTGTGTT+TGG | + | chr6.2:10369322-10369341 | MS.gene018309:intron | 35.0% | |
| TTTATTTGATGCCTAGAGTG+AGG | + | chr6.2:10373094-10373113 | MS.gene018309:intron | 35.0% | |
| ! | AATTAGTCTCCATGAACAAG+AGG | - | chr6.2:10370985-10371004 | None:intergenic | 35.0% |
| ! | AGGTAACTTGTGTAAGAATG+AGG | + | chr6.2:10372570-10372589 | MS.gene018309:intron | 35.0% |
| ! | CCAACAAAGTATCAGAAGAT+GGG | + | chr6.2:10374625-10374644 | MS.gene018309:CDS | 35.0% |
| ! | TAATGAGTTGGACAGGAATA+TGG | + | chr6.2:10369902-10369921 | MS.gene018309:intron | 35.0% |
| ! | TAGAACTTCTGTTTGCCTTT+TGG | + | chr6.2:10372724-10372743 | MS.gene018309:intron | 35.0% |
| ! | TGAATCAAGTTGTCCTTGTT+AGG | + | chr6.2:10373953-10373972 | MS.gene018309:CDS | 35.0% |
| !! | AGAATGTGTTTGTTGTGCTA+TGG | + | chr6.2:10369376-10369395 | MS.gene018309:intron | 35.0% |
| !! | CAATTTCTAGCCTTTAAGTC+TGG | + | chr6.2:10373988-10374007 | MS.gene018309:intron | 35.0% |
| !! | CACCATCTCTAATGTTTTGA+AGG | + | chr6.2:10372196-10372215 | MS.gene018309:CDS | 35.0% |
| !! | CCAGTTTTATGTCTACATGA+AGG | + | chr6.2:10372055-10372074 | MS.gene018309:CDS | 35.0% |
| !! | CTACATGAAGGCATTGAATT+TGG | + | chr6.2:10372067-10372086 | MS.gene018309:CDS | 35.0% |
| !! | TGCGTTTTAAGCATAACGAT+TGG | + | chr6.2:10370882-10370901 | MS.gene018309:intron | 35.0% |
| !! | TTTTCGTGATTTTGGGGATT+TGG | + | chr6.2:10368877-10368896 | MS.gene018309:intron | 35.0% |
| !!! | TTTTTTGTTGCGAGTGCTAA+AGG | + | chr6.2:10369539-10369558 | MS.gene018309:intron | 35.0% |
| AAGATGATAGACGGTCCAAA+AGG | - | chr6.2:10372742-10372761 | None:intergenic | 40.0% | |
| AAGCAAAGTCTGCTAACTTG+AGG | - | chr6.2:10370306-10370325 | None:intergenic | 40.0% | |
| AATACCTTCTAGGCCCTATT+AGG | - | chr6.2:10370850-10370869 | None:intergenic | 40.0% | |
| ACAATCTCCATGACTTCATC+TGG | - | chr6.2:10371844-10371863 | None:intergenic | 40.0% | |
| ACCATTCCTAGTCTCTCTTA+TGG | - | chr6.2:10373120-10373139 | None:intergenic | 40.0% | |
| ACTTATTAGGGACACACTTC+AGG | + | chr6.2:10373780-10373799 | MS.gene018309:CDS | 40.0% | |
| AGAAACAGCTCTCTATGTTC+TGG | - | chr6.2:10372176-10372195 | None:intergenic | 40.0% | |
| AGACAATTCGTGACATTGCA+AGG | - | chr6.2:10371187-10371206 | None:intergenic | 40.0% | |
| AGCCTTTAAGTCTGGCTATA+GGG | + | chr6.2:10373996-10374015 | MS.gene018309:intron | 40.0% | |
| AGTCAAATCACTAGAGGCAA+AGG | + | chr6.2:10369832-10369851 | MS.gene018309:intron | 40.0% | |
| ATATATGACTACTGGCCGAA+TGG | - | chr6.2:10372344-10372363 | None:intergenic | 40.0% | |
| ATCAAGCAGCAAAACAACTG+AGG | - | chr6.2:10371607-10371626 | None:intergenic | 40.0% | |
| ATGGGATGTTATGTTACCTC+GGG | - | chr6.2:10368834-10368853 | None:intergenic | 40.0% | |
| ATGTCACGAATTGTCTAGAG+AGG | + | chr6.2:10371191-10371210 | MS.gene018309:intron | 40.0% | |
| ATTTCAATCTGACTGAACGC+AGG | - | chr6.2:10374519-10374538 | None:intergenic | 40.0% | |
| CAAATGTCTCAATACTAGCG+AGG | - | chr6.2:10373167-10373186 | None:intergenic | 40.0% | |
| CAAGTTACCTGAAATACGTC+AGG | - | chr6.2:10372560-10372579 | None:intergenic | 40.0% | |
| CAATGCATTCTTCATGCACA+AGG | - | chr6.2:10373696-10373715 | None:intergenic | 40.0% | |
| CATGTTGCAGTGTGATTTAC+TGG | + | chr6.2:10373429-10373448 | MS.gene018309:intron | 40.0% | |
| CCCATCTTCTGATACTTTGT+TGG | - | chr6.2:10374628-10374647 | None:intergenic | 40.0% | |
| CCTATAGTAAGACTAGATGG+TGG | + | chr6.2:10369729-10369748 | MS.gene018309:intron | 40.0% | |
| CTATGATTGAATGTAGGGGA+CGG | - | chr6.2:10372624-10372643 | None:intergenic | 40.0% | |
| CTGGAGAATGATGCCAAATA+TGG | + | chr6.2:10373472-10373491 | MS.gene018309:CDS | 40.0% | |
| GAAGAACAGAGATTGTGTTG+TGG | - | chr6.2:10372367-10372386 | None:intergenic | 40.0% | |
| GAAGGAATGGGTGTAATTGA+TGG | + | chr6.2:10371111-10371130 | MS.gene018309:intron | 40.0% | |
| GAGATGCAACATACCTAACA+AGG | - | chr6.2:10373969-10373988 | None:intergenic | 40.0% | |
| GAGTGTAGTCAAATCACTAG+AGG | + | chr6.2:10369826-10369845 | MS.gene018309:intron | 40.0% | |
| GATTCAATTGGAAGGTTGGA+TGG | + | chr6.2:10369146-10369165 | MS.gene018309:intron | 40.0% | |
| GCAAGGTGATATGAATGTCT+GGG | - | chr6.2:10371170-10371189 | None:intergenic | 40.0% | |
| GCACCTATAGTAAGACTAGA+TGG | + | chr6.2:10369726-10369745 | MS.gene018309:intron | 40.0% | |
| GCATTGAATTTGGCTGTTGA+TGG | + | chr6.2:10372077-10372096 | MS.gene018309:CDS | 40.0% | |
| GGCTGAAGAATTCATTGCTA+TGG | + | chr6.2:10370329-10370348 | MS.gene018309:CDS | 40.0% | |
| GGGTAGAAACATCTTATCCT+AGG | + | chr6.2:10371213-10371232 | MS.gene018309:intron | 40.0% | |
| GTGGAATGATGCAACAGTAT+CGG | + | chr6.2:10369173-10369192 | MS.gene018309:intron | 40.0% | |
| GTGGTAAGACATGAAGTCAT+AGG | + | chr6.2:10369667-10369686 | MS.gene018309:intron | 40.0% | |
| TAAACCTAATAGGGCCTAGA+AGG | + | chr6.2:10370843-10370862 | MS.gene018309:intron | 40.0% | |
| TAGCCTTTAAGTCTGGCTAT+AGG | + | chr6.2:10373995-10374014 | MS.gene018309:intron | 40.0% | |
| TCAAGTTAGCAGACTTTGCT+TGG | + | chr6.2:10370305-10370324 | MS.gene018309:CDS | 40.0% | |
| TCGATAGCTTCTTGAAAGAG+TGG | + | chr6.2:10372138-10372157 | MS.gene018309:CDS | 40.0% | |
| TGAGAACAAAGCTAGTGACT+TGG | + | chr6.2:10374167-10374186 | MS.gene018309:CDS | 40.0% | |
| TGAGAATCCAGATGAAGTCA+TGG | + | chr6.2:10371834-10371853 | MS.gene018309:CDS | 40.0% | |
| TGAGTTACTCTTGGAGTCAA+TGG | + | chr6.2:10371306-10371325 | MS.gene018309:intron | 40.0% | |
| TGAGTTACTCTTGGAGTCAA+TGG | - | chr6.2:10371325-10371306 | None:intergenic | 40.0% | |
| TGATGCGATCCCTATAATAC+AGG | + | chr6.2:10374260-10374279 | MS.gene018309:intron | 40.0% | |
| TGCAAGGTGATATGAATGTC+TGG | - | chr6.2:10371171-10371190 | None:intergenic | 40.0% | |
| TGTCACGAATTGTCTAGAGA+GGG | + | chr6.2:10371192-10371211 | MS.gene018309:intron | 40.0% | |
| ! | AAACTGGGCTTAGGTTGTTT+GGG | + | chr6.2:10369752-10369771 | MS.gene018309:intron | 40.0% |
| ! | AACAAAGCTAGTGACTTGGA+GGG | + | chr6.2:10374171-10374190 | MS.gene018309:CDS | 40.0% |
| ! | AATTTTCACAGCGATTCCAC+TGG | - | chr6.2:10372864-10372883 | None:intergenic | 40.0% |
| ! | ATGATGCAACAGTATCGGAT+TGG | + | chr6.2:10369178-10369197 | MS.gene018309:intron | 40.0% |
| ! | CAGAGATTAATGAGTTGGAC+AGG | + | chr6.2:10369895-10369914 | MS.gene018309:intron | 40.0% |
| ! | GCCAACAAAGTATCAGAAGA+TGG | + | chr6.2:10374624-10374643 | MS.gene018309:CDS | 40.0% |
| ! | TCGGTGTGTGTTTTGTATGA+TGG | + | chr6.2:10369348-10369367 | MS.gene018309:intron | 40.0% |
| ! | TGATACTTTGTTGGCCTGAA+TGG | - | chr6.2:10374619-10374638 | None:intergenic | 40.0% |
| !! | AAGACTAGATGGTGGAAACT+GGG | + | chr6.2:10369737-10369756 | MS.gene018309:intron | 40.0% |
| !! | AGGAAGGAGAGTACTTAACA+CGG | + | chr6.2:10369804-10369823 | MS.gene018309:intron | 40.0% |
| !! | CCACCATCTAGTCTTACTAT+AGG | - | chr6.2:10369732-10369751 | None:intergenic | 40.0% |
| !! | GCATGTTTTGAGTGAAGCTA+AGG | + | chr6.2:10372496-10372515 | MS.gene018309:CDS | 40.0% |
| !! | GCTTGATGATGTTGTATCTG+TGG | + | chr6.2:10371620-10371639 | MS.gene018309:intron | 40.0% |
| !! | GTGTGATTGTGTTTGGTGTT+CGG | + | chr6.2:10369329-10369348 | MS.gene018309:intron | 40.0% |
| !! | TAAGACTAGATGGTGGAAAC+TGG | + | chr6.2:10369736-10369755 | MS.gene018309:intron | 40.0% |
| !! | TGTTTTGAGTGAAGCTAAGG+AGG | + | chr6.2:10372499-10372518 | MS.gene018309:CDS | 40.0% |
| !! | TTGATGGTTCTTTGAGATCC+AGG | + | chr6.2:10371127-10371146 | MS.gene018309:intron | 40.0% |
| !!! | TGCTACTTTTTCTGGAGAAG+AGG | + | chr6.2:10372472-10372491 | MS.gene018309:CDS | 40.0% |
| !!! | TTGGGGATTTGGTTGGTTTT+GGG | + | chr6.2:10368888-10368907 | MS.gene018309:intron | 40.0% |
| !!! | TTTGGGGATTTGGTTGGTTT+TGG | + | chr6.2:10368887-10368906 | MS.gene018309:intron | 40.0% |
| AAGGTTGGATGACAGAAGAG+AGG | + | chr6.2:10370015-10370034 | MS.gene018309:intron | 45.0% | |
| AGAGAGAGAGAGAGAGAGAA+GGG | - | chr6.2:10371334-10371353 | None:intergenic | 45.0% | |
| AGAGAGGAATGATGCAACAG+TGG | + | chr6.2:10370031-10370050 | MS.gene018309:intron | 45.0% | |
| AGGAATGATGCAACAGTGGT+TGG | + | chr6.2:10370035-10370054 | MS.gene018309:intron | 45.0% | |
| AGTTAGCAGACTTTGCTTGG+AGG | + | chr6.2:10370308-10370327 | MS.gene018309:CDS | 45.0% | |
| CACGACCCCACAAAAAATGA+AGG | - | chr6.2:10369229-10369248 | None:intergenic | 45.0% | |
| CAGACTTCGTCATCTAAGCA+AGG | - | chr6.2:10373339-10373358 | None:intergenic | 45.0% | |
| CATCGGACTCACTATCCATT+CGG | + | chr6.2:10372326-10372345 | MS.gene018309:intron | 45.0% | |
| CATTGCTATGGGAAAGTGGT+TGG | + | chr6.2:10370341-10370360 | MS.gene018309:CDS | 45.0% | |
| GAATATAAAGAGAAGCCCCG+GGG | + | chr6.2:10369774-10369793 | MS.gene018309:intron | 45.0% | |
| GCATGTAGACATGCACCTTA+TGG | + | chr6.2:10374018-10374037 | MS.gene018309:intron | 45.0% | |
| GCCATAAGAGAGACTAGGAA+TGG | + | chr6.2:10373116-10373135 | MS.gene018309:intron | 45.0% | |
| GGAATATAAAGAGAAGCCCC+GGG | + | chr6.2:10369773-10369792 | MS.gene018309:intron | 45.0% | |
| GGAATGATGCAACAGTGGTT+GGG | + | chr6.2:10370036-10370055 | MS.gene018309:intron | 45.0% | |
| GGGAATATAAAGAGAAGCCC+CGG | + | chr6.2:10369772-10369791 | MS.gene018309:intron | 45.0% | |
| GTCACGAATTGTCTAGAGAG+GGG | + | chr6.2:10371193-10371212 | MS.gene018309:intron | 45.0% | |
| GTGTTTCAAAGGATGAGACG+CGG | - | chr6.2:10372949-10372968 | None:intergenic | 45.0% | |
| GTTGCAGTCTCTTCTCTTTC+TGG | + | chr6.2:10372985-10373004 | MS.gene018309:intron | 45.0% | |
| TCTCAATACTAGCGAGGTCA+TGG | - | chr6.2:10373161-10373180 | None:intergenic | 45.0% | |
| TCTCCTTCCTACATAATCCC+CGG | - | chr6.2:10369794-10369813 | None:intergenic | 45.0% | |
| TGCCCTATAGCCAGACTTAA+AGG | - | chr6.2:10374001-10374020 | None:intergenic | 45.0% | |
| TGTGCAGTCATCACACTGAT+CGG | + | chr6.2:10374116-10374135 | MS.gene018309:intron | 45.0% | |
| TTCAGTGAACTGTGTACAGC+TGG | + | chr6.2:10370587-10370606 | MS.gene018309:intron | 45.0% | |
| TTGTTGCGAGTGCTAAAGGA+GGG | + | chr6.2:10369543-10369562 | MS.gene018309:intron | 45.0% | |
| TTTGTTGCGAGTGCTAAAGG+AGG | + | chr6.2:10369542-10369561 | MS.gene018309:intron | 45.0% | |
| ! | ATTGATGCTAGAGAGGGCAT+GGG | + | chr6.2:10370107-10370126 | MS.gene018309:intron | 45.0% |
| ! | GAAACTGGGCTTAGGTTGTT+TGG | + | chr6.2:10369751-10369770 | MS.gene018309:intron | 45.0% |
| ! | GAACAAAGCTAGTGACTTGG+AGG | + | chr6.2:10374170-10374189 | MS.gene018309:CDS | 45.0% |
| ! | GTGAAGATGGACTCTACATC+TGG | - | chr6.2:10371787-10371806 | None:intergenic | 45.0% |
| ! | TTGGTTGATCTCAGCTCTGA+TGG | + | chr6.2:10373736-10373755 | MS.gene018309:CDS | 45.0% |
| !! | CGTGATTTTGGGGATTTGGT+TGG | + | chr6.2:10368881-10368900 | MS.gene018309:intron | 45.0% |
| !! | GCTGTGTTGTTTGTGGCTTA+GGG | + | chr6.2:10369571-10369590 | MS.gene018309:intron | 45.0% |
| !! | GGATGATGCTGTGTTGTTTG+TGG | + | chr6.2:10369564-10369583 | MS.gene018309:intron | 45.0% |
| !! | GGTGTCATTGATGCTAGAGA+GGG | + | chr6.2:10370101-10370120 | MS.gene018309:intron | 45.0% |
| !! | TGCTGTGTTGTTTGTGGCTT+AGG | + | chr6.2:10369570-10369589 | MS.gene018309:intron | 45.0% |
| !!! | CTTCATTTTTTGTGGGGTCG+TGG | + | chr6.2:10369227-10369246 | MS.gene018309:intron | 45.0% |
| !!! | TGGGGATTTGGTTGGTTTTG+GGG | + | chr6.2:10368889-10368908 | MS.gene018309:intron | 45.0% |
| !! | TTAATTATTATAAGAATTAA+TGG | + | chr6.2:10371261-10371280 | MS.gene018309:intron | 5.0% |
| !! | TTAATTATTATAAGAATTAA+TGG | - | chr6.2:10371280-10371261 | None:intergenic | 5.0% |
| !! | TTAATTCTTATAATAATTAA+TGG | + | chr6.2:10370745-10370764 | MS.gene018309:intron | 5.0% |
| !! | TTAATTCTTATAATAATTAA+TGG | - | chr6.2:10370764-10370745 | None:intergenic | 5.0% |
| ACAAACAACCATGACGACGG+TGG | + | chr6.2:10368734-10368753 | MS.gene018309:CDS | 50.0% | |
| AGTATCAGAAGATGGGTCCC+AGG | + | chr6.2:10374632-10374651 | MS.gene018309:CDS | 50.0% | |
| CATCACACTGATCGGGTGTT+TGG | + | chr6.2:10374124-10374143 | MS.gene018309:CDS | 50.0% | |
| CATTGATGCTAGAGAGGGCA+TGG | + | chr6.2:10370106-10370125 | MS.gene018309:intron | 50.0% | |
| CGCACAAACAACCATGACGA+CGG | + | chr6.2:10368731-10368750 | MS.gene018309:CDS | 50.0% | |
| CGTCGTCATGGTTGTTTGTG+CGG | - | chr6.2:10368733-10368752 | None:intergenic | 50.0% | |
| CTCCTTCCTACATAATCCCC+GGG | - | chr6.2:10369793-10369812 | None:intergenic | 50.0% | |
| CTCTCTTATGGCCTCACTCT+AGG | - | chr6.2:10373108-10373127 | None:intergenic | 50.0% | |
| GAATCGGACAACGGAAAGAG+CGG | - | chr6.2:10368781-10368800 | None:intergenic | 50.0% | |
| GAGACTGCAACAGAGAGAAC+TGG | - | chr6.2:10372976-10372995 | None:intergenic | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+AGG | - | chr6.2:10371335-10371354 | None:intergenic | 50.0% | |
| GCAGCCAAATGAAAAGCCTG+CGG | + | chr6.2:10371891-10371910 | MS.gene018309:CDS | 50.0% | |
| GGGTGTTTGGTCAGCATCAA+TGG | + | chr6.2:10374137-10374156 | MS.gene018309:CDS | 50.0% | |
| GTAACAACTCGCTTGAGTCC+TGG | - | chr6.2:10371148-10371167 | None:intergenic | 50.0% | |
| GTGAGGCCATAAGAGAGACT+AGG | + | chr6.2:10373111-10373130 | MS.gene018309:intron | 50.0% | |
| GTGCAGTCATCACACTGATC+GGG | + | chr6.2:10374117-10374136 | MS.gene018309:intron | 50.0% | |
| TACATCTTCAATCGCACCGC+AGG | - | chr6.2:10371910-10371929 | None:intergenic | 50.0% | |
| TACTGGACATGCCTGCTGTT+GGG | + | chr6.2:10373446-10373465 | MS.gene018309:CDS | 50.0% | |
| TATGGGAAAGTGGTTGGAGC+TGG | + | chr6.2:10370347-10370366 | MS.gene018309:CDS | 50.0% | |
| TCAGCGAACTGCCAAACCTT+GGG | - | chr6.2:10374661-10374680 | None:intergenic | 50.0% | |
| TCCTTCCTACATAATCCCCG+GGG | - | chr6.2:10369792-10369811 | None:intergenic | 50.0% | |
| TGATGCAACAGTGGTTGGGT+TGG | + | chr6.2:10370040-10370059 | MS.gene018309:intron | 50.0% | |
| TGGAAGGTTGGATGGAAGAG+TGG | + | chr6.2:10369154-10369173 | MS.gene018309:intron | 50.0% | |
| TGTAGCTGACCCCACTTAGT+AGG | + | chr6.2:10369959-10369978 | MS.gene018309:intron | 50.0% | |
| TTACTGGACATGCCTGCTGT+TGG | + | chr6.2:10373445-10373464 | MS.gene018309:CDS | 50.0% | |
| ! | GAGGGCATGGGAAAAGTTGA+AGG | + | chr6.2:10370119-10370138 | MS.gene018309:intron | 50.0% |
| ! | GATCTCAGCTCTGATGGATC+TGG | + | chr6.2:10373742-10373761 | MS.gene018309:CDS | 50.0% |
| ! | TCACAGCGATTCCACTGGTT+CGG | - | chr6.2:10372859-10372878 | None:intergenic | 50.0% |
| !! | AGATGGTGGAAACTGGGCTT+AGG | + | chr6.2:10369743-10369762 | MS.gene018309:intron | 50.0% |
| !! | GAAGGCACCTGACGTATTTC+AGG | + | chr6.2:10372550-10372569 | MS.gene018309:CDS | 50.0% |
| !! | GGGTGTCATTGATGCTAGAG+AGG | + | chr6.2:10370100-10370119 | MS.gene018309:intron | 50.0% |
| AGAAGCCCCGGGGATTATGT+AGG | + | chr6.2:10369784-10369803 | MS.gene018309:intron | 55.0% | |
| AGGCAAGCTCAGAGGCGAAT+CGG | - | chr6.2:10368797-10368816 | None:intergenic | 55.0% | |
| AGTAGGAACCACCGTCGTCA+TGG | - | chr6.2:10368745-10368764 | None:intergenic | 55.0% | |
| ATTCGCCTCTGAGCTTGCCT+GGG | + | chr6.2:10368797-10368816 | MS.gene018309:CDS | 55.0% | |
| CTAGCGAGGTCATGGCTTCA+TGG | - | chr6.2:10373153-10373172 | None:intergenic | 55.0% | |
| CTCAGAGGCGAATCGGACAA+CGG | - | chr6.2:10368790-10368809 | None:intergenic | 55.0% | |
| GGAAAGAGCGGCGTCTTCTT+CGG | - | chr6.2:10368769-10368788 | None:intergenic | 55.0% | |
| GGTGAGAGATTCCGAACCAG+TGG | + | chr6.2:10372845-10372864 | MS.gene018309:intron | 55.0% | |
| TTCAAAGGATGAGACGCGGC+AGG | - | chr6.2:10372945-10372964 | None:intergenic | 55.0% | |
| TTCTCCAGTTGCCCAACAGC+AGG | - | chr6.2:10373460-10373479 | None:intergenic | 55.0% | |
| ! | CGCACCGCAGGCTTTTCATT+TGG | - | chr6.2:10371898-10371917 | None:intergenic | 55.0% |
| ! | TTTTTGTGGGGTCGTGGCTC+TGG | + | chr6.2:10369233-10369252 | MS.gene018309:intron | 55.0% |
| ATCAGCCCAGGCAAGCTCAG+AGG | - | chr6.2:10368805-10368824 | None:intergenic | 60.0% | |
| CATGCCTGCTGTTGGGCAAC+TGG | + | chr6.2:10373453-10373472 | MS.gene018309:CDS | 60.0% | |
| GATTCGCCTCTGAGCTTGCC+TGG | + | chr6.2:10368796-10368815 | MS.gene018309:CDS | 60.0% | |
| GCCCCGGGGATTATGTAGGA+AGG | + | chr6.2:10369788-10369807 | MS.gene018309:intron | 60.0% | |
| GCGGCGTCTTCTTCGGAAGT+AGG | - | chr6.2:10368762-10368781 | None:intergenic | 60.0% | |
| TGAGACGCGGCAGGTAGAAG+TGG | - | chr6.2:10372936-10372955 | None:intergenic | 60.0% | |
| TGCCAAACCTTGGGCTGCCT+GGG | - | chr6.2:10374652-10374671 | None:intergenic | 60.0% | |
| CTGCCAAACCTTGGGCTGCC+TGG | - | chr6.2:10374653-10374672 | None:intergenic | 65.0% | |
| GAGCTTGCCTGGGCTGATGC+TGG | + | chr6.2:10368807-10368826 | MS.gene018309:CDS | 65.0% | |
| GTCCCAGGCAGCCCAAGGTT+TGG | + | chr6.2:10374647-10374666 | MS.gene018309:CDS | 65.0% | |
| CTCGGGACCAGCATCAGCCC+AGG | - | chr6.2:10368817-10368836 | None:intergenic | 70.0% | |
| CTGGGCTGATGCTGGTCCCG+AGG | + | chr6.2:10368815-10368834 | MS.gene018309:CDS | 70.0% | |
| GATGGGTCCCAGGCAGCCCA+AGG | + | chr6.2:10374642-10374661 | MS.gene018309:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 10368669 | 10374680 | 10368669 | ID=MS.gene018309 |
| chr6.2 | mRNA | 10368669 | 10374680 | 10368669 | ID=MS.gene018309.t1;Parent=MS.gene018309 |
| chr6.2 | exon | 10368669 | 10368836 | 10368669 | ID=MS.gene018309.t1.exon1;Parent=MS.gene018309.t1 |
| chr6.2 | CDS | 10368669 | 10368836 | 10368669 | ID=cds.MS.gene018309.t1;Parent=MS.gene018309.t1 |
| chr6.2 | exon | 10370294 | 10370423 | 10370294 | ID=MS.gene018309.t1.exon2;Parent=MS.gene018309.t1 |
| chr6.2 | CDS | 10370294 | 10370423 | 10370294 | ID=cds.MS.gene018309.t1;Parent=MS.gene018309.t1 |
| chr6.2 | exon | 10371788 | 10371926 | 10371788 | ID=MS.gene018309.t1.exon3;Parent=MS.gene018309.t1 |
| chr6.2 | CDS | 10371788 | 10371926 | 10371788 | ID=cds.MS.gene018309.t1;Parent=MS.gene018309.t1 |
| chr6.2 | exon | 10372016 | 10372228 | 10372016 | ID=MS.gene018309.t1.exon4;Parent=MS.gene018309.t1 |
| chr6.2 | CDS | 10372016 | 10372228 | 10372016 | ID=cds.MS.gene018309.t1;Parent=MS.gene018309.t1 |
| chr6.2 | exon | 10372433 | 10372571 | 10372433 | ID=MS.gene018309.t1.exon5;Parent=MS.gene018309.t1 |
| chr6.2 | CDS | 10372433 | 10372571 | 10372433 | ID=cds.MS.gene018309.t1;Parent=MS.gene018309.t1 |
| chr6.2 | exon | 10373439 | 10373589 | 10373439 | ID=MS.gene018309.t1.exon6;Parent=MS.gene018309.t1 |
| chr6.2 | CDS | 10373439 | 10373589 | 10373439 | ID=cds.MS.gene018309.t1;Parent=MS.gene018309.t1 |
| chr6.2 | exon | 10373692 | 10373801 | 10373692 | ID=MS.gene018309.t1.exon7;Parent=MS.gene018309.t1 |
| chr6.2 | CDS | 10373692 | 10373801 | 10373692 | ID=cds.MS.gene018309.t1;Parent=MS.gene018309.t1 |
| chr6.2 | exon | 10373877 | 10373974 | 10373877 | ID=MS.gene018309.t1.exon8;Parent=MS.gene018309.t1 |
| chr6.2 | CDS | 10373877 | 10373974 | 10373877 | ID=cds.MS.gene018309.t1;Parent=MS.gene018309.t1 |
| chr6.2 | exon | 10374123 | 10374192 | 10374123 | ID=MS.gene018309.t1.exon9;Parent=MS.gene018309.t1 |
| chr6.2 | CDS | 10374123 | 10374192 | 10374123 | ID=cds.MS.gene018309.t1;Parent=MS.gene018309.t1 |
| chr6.2 | exon | 10374591 | 10374680 | 10374591 | ID=MS.gene018309.t1.exon10;Parent=MS.gene018309.t1 |
| chr6.2 | CDS | 10374591 | 10374680 | 10374591 | ID=cds.MS.gene018309.t1;Parent=MS.gene018309.t1 |
| Gene Sequence |
| Protein sequence |
