Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86150.t1 | RHN50194.1 | 98 | 410 | 8 | 0 | 1 | 410 | 1 | 410 | 1.10E-222 | 782.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86150.t1 | Q54KZ8 | 35.2 | 349 | 214 | 7 | 56 | 398 | 50 | 392 | 1.5e-55 | 218.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86150.t1 | A0A396HEF3 | 98.0 | 410 | 8 | 0 | 1 | 410 | 1 | 410 | 7.8e-223 | 782.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050838 | MS.gene86150 | 0.830438 | 2.94E-55 | -1.69E-46 |
| MS.gene051791 | MS.gene86150 | 0.819032 | 1.44E-52 | -1.69E-46 |
| MS.gene051850 | MS.gene86150 | 0.800002 | 1.77E-48 | -1.69E-46 |
| MS.gene051885 | MS.gene86150 | 0.800774 | 1.23E-48 | -1.69E-46 |
| MS.gene052947 | MS.gene86150 | 0.814146 | 1.79E-51 | -1.69E-46 |
| MS.gene055424 | MS.gene86150 | 0.800554 | 1.37E-48 | -1.69E-46 |
| MS.gene057094 | MS.gene86150 | 0.839577 | 1.46E-57 | -1.69E-46 |
| MS.gene06001 | MS.gene86150 | 0.802991 | 4.31E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene018310 | MS.gene86150 | PPI |
| MS.gene39043 | MS.gene86150 | PPI |
| MS.gene29609 | MS.gene86150 | PPI |
| MS.gene045655 | MS.gene86150 | PPI |
| MS.gene77710 | MS.gene86150 | PPI |
| MS.gene42526 | MS.gene86150 | PPI |
| MS.gene014112 | MS.gene86150 | PPI |
| MS.gene018309 | MS.gene86150 | PPI |
| MS.gene008080 | MS.gene86150 | PPI |
| MS.gene72510 | MS.gene86150 | PPI |
| MS.gene057321 | MS.gene86150 | PPI |
| MS.gene37293 | MS.gene86150 | PPI |
| MS.gene80792 | MS.gene86150 | PPI |
| MS.gene017884 | MS.gene86150 | PPI |
| MS.gene031997 | MS.gene86150 | PPI |
| MS.gene85021 | MS.gene86150 | PPI |
| MS.gene80663 | MS.gene86150 | PPI |
| MS.gene86150 | MS.gene69249 | PPI |
| MS.gene56673 | MS.gene86150 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86150.t1 | MTR_6g015395 | 97.561 | 410 | 10 | 0 | 1 | 410 | 1 | 410 | 0.0 | 829 |
| MS.gene86150.t1 | MTR_7g091480 | 97.073 | 410 | 12 | 0 | 1 | 410 | 1 | 410 | 0.0 | 819 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86150.t1 | AT5G15610 | 68.039 | 413 | 129 | 1 | 1 | 410 | 1 | 413 | 0.0 | 596 |
| MS.gene86150.t1 | AT5G15610 | 63.575 | 442 | 129 | 2 | 1 | 410 | 1 | 442 | 0.0 | 579 |
| MS.gene86150.t1 | AT3G02200 | 65.228 | 417 | 138 | 1 | 1 | 410 | 1 | 417 | 0.0 | 579 |
| MS.gene86150.t1 | AT3G02200 | 66.391 | 363 | 122 | 0 | 1 | 363 | 1 | 363 | 0.0 | 513 |
Find 83 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATTTCTTATGAACTTATT+AGG | 0.121199 | 6.3:+9538468 | MS.gene86150:CDS |
| TTCTTAAAAGAGTGGAAAAT+TGG | 0.201679 | 6.3:+9536769 | MS.gene86150:CDS |
| CTGATATAACAGAGCATATT+TGG | 0.205824 | 6.3:-9538186 | None:intergenic |
| TAATAAGTTCATAAGAAATT+TGG | 0.224378 | 6.3:-9538466 | None:intergenic |
| GAAGGCACCTGACGTATTTC+AGG | 0.250708 | 6.3:+9537170 | MS.gene86150:CDS |
| CATGTTGTAGTGTGATTTAC+TGG | 0.252153 | 6.3:+9538130 | MS.gene86150:intron |
| CTACATGAAGGCATTGAATT+TGG | 0.253476 | 6.3:+9536690 | MS.gene86150:CDS |
| GATCAATTTGTATAATCTTT+TGG | 0.267985 | 6.3:+9536642 | MS.gene86150:CDS |
| GATTCGCCTCTGAGCTTGCC+TGG | 0.291138 | 6.3:+9534427 | MS.gene86150:CDS |
| CTGCCAAACCATGGGCTGCC+TGG | 0.300749 | 6.3:-9539394 | None:intergenic |
| AATTTCTTATGAACTTATTA+GGG | 0.303697 | 6.3:+9538469 | MS.gene86150:CDS |
| TCCACCTTATTGAATGACTA+TGG | 0.328479 | 6.3:+9538269 | MS.gene86150:CDS |
| CAAGGACAACTTGATTCATT+TGG | 0.340745 | 6.3:-9538652 | None:intergenic |
| ACAATCTCCATGACTTCATC+TGG | 0.341158 | 6.3:-9536464 | None:intergenic |
| AGAAACAGCTCTCTCTGTTC+TGG | 0.342008 | 6.3:-9536796 | None:intergenic |
| CATGCCTGCTGTTGGGCAAC+TGG | 0.343731 | 6.3:+9538154 | MS.gene86150:CDS |
| TTTACCATAGTCATTCAATA+AGG | 0.369504 | 6.3:-9538273 | None:intergenic |
| TGAATCAAGTTGTCCTTGTT+AGG | 0.370330 | 6.3:+9538657 | MS.gene86150:CDS |
| CCCATCTTCCGATACTTTGT+TGG | 0.373661 | 6.3:-9539369 | None:intergenic |
| GAGCTTGCCTGGGCTGATGC+TGG | 0.382511 | 6.3:+9534438 | MS.gene86150:CDS |
| GTCCCAGGCAGCCCATGGTT+TGG | 0.385564 | 6.3:+9539391 | MS.gene86150:CDS |
| ATGATGATGAAGTTGAACTA+TGG | 0.393896 | 6.3:+9538585 | MS.gene86150:CDS |
| GCATTGAATTTGGCTGTTGA+TGG | 0.394749 | 6.3:+9536700 | MS.gene86150:CDS |
| ACTTATTAGGGACACACTTC+AGG | 0.395673 | 6.3:+9538481 | MS.gene86150:CDS |
| CGATACTTTGTTGGCCTGAA+TGG | 0.402591 | 6.3:-9539360 | None:intergenic |
| TAGACATAAAACTGGCAGTA+TGG | 0.404837 | 6.3:-9536670 | None:intergenic |
| TACTGGACATGCCTGCTGTT+GGG | 0.410514 | 6.3:+9538147 | MS.gene86150:CDS |
| TGCCAAACCATGGGCTGCCT+GGG | 0.411642 | 6.3:-9539393 | None:intergenic |
| TCAAGTTAGCAGACTTTGCT+TGG | 0.414784 | 6.3:+9535692 | MS.gene86150:CDS |
| CATCACACTGATCGGGTGTT+TGG | 0.417804 | 6.3:+9538828 | MS.gene86150:CDS |
| AAATGTGATCAGTACCATTC+AGG | 0.428425 | 6.3:+9539346 | MS.gene86150:CDS |
| GGAAAGAGCGGCGTCTTCTT+CGG | 0.432130 | 6.3:-9534397 | None:intergenic |
| CCTTCATGTAGACATAAAAC+TGG | 0.439865 | 6.3:-9536678 | None:intergenic |
| GGCTGAAGAATTCATTGCTA+TGG | 0.447568 | 6.3:+9535716 | MS.gene86150:CDS |
| GATCTCAGCTCTGATGGATC+TGG | 0.452853 | 6.3:+9538443 | MS.gene86150:CDS |
| GGGTGTTTGGTCAGCATCAA+TGG | 0.455622 | 6.3:+9538841 | MS.gene86150:CDS |
| TCTTAAAAGAGTGGAAAATT+GGG | 0.458033 | 6.3:+9536770 | MS.gene86150:CDS |
| TTGGTTGATCTCAGCTCTGA+TGG | 0.460760 | 6.3:+9538437 | MS.gene86150:CDS |
| ATTCGCCTCTGAGCTTGCCT+GGG | 0.468400 | 6.3:+9534428 | MS.gene86150:CDS |
| CATTGCTATGGGAAAGTGGT+TGG | 0.477727 | 6.3:+9535728 | MS.gene86150:CDS |
| ATTGCAGATAATAGTGAAGA+TGG | 0.482900 | 6.3:-9536420 | None:intergenic |
| AGGCAAGCTCAGAGGCGAAT+CGG | 0.484064 | 6.3:-9534425 | None:intergenic |
| GCCAACAAAGTATCGGAAGA+TGG | 0.484341 | 6.3:+9539368 | MS.gene86150:CDS |
| TTACTGGACATGCCTGCTGT+TGG | 0.496081 | 6.3:+9538146 | MS.gene86150:CDS |
| TTCTCCAGTTGCCCAACAGC+AGG | 0.499064 | 6.3:-9538158 | None:intergenic |
| TACATCTTCAATCGCACCGC+AGG | 0.502707 | 6.3:-9536530 | None:intergenic |
| CAATGCATTCTTCATGCACA+AGG | 0.504463 | 6.3:-9538394 | None:intergenic |
| TTCCTTCAAAACATTAGAGA+TGG | 0.510695 | 6.3:-9536821 | None:intergenic |
| CTCGGGACCAGCATCAGCCC+AGG | 0.516732 | 6.3:-9534445 | None:intergenic |
| GCGGCGTCTTCTTCGGAAGT+AGG | 0.526498 | 6.3:-9534390 | None:intergenic |
| GAACAAAGCTAGTGACTTGG+AGG | 0.528393 | 6.3:+9538874 | MS.gene86150:CDS |
| TGTGCAGTCATCACACTGAT+CGG | 0.531347 | 6.3:+9538820 | MS.gene86150:intron |
| AGTAGGAACCACCGTCGTCA+TGG | 0.531600 | 6.3:-9534373 | None:intergenic |
| AATTCATTGCTATGGGAAAG+TGG | 0.536465 | 6.3:+9535724 | MS.gene86150:CDS |
| GTGCAGTCATCACACTGATC+GGG | 0.542885 | 6.3:+9538821 | MS.gene86150:intron |
| ACCATAGTCATTCAATAAGG+TGG | 0.547992 | 6.3:-9538270 | None:intergenic |
| GCTGAAGAATTCATTGCTAT+GGG | 0.548812 | 6.3:+9535717 | MS.gene86150:CDS |
| CAAGTTACCTGAAATACGTC+AGG | 0.554665 | 6.3:-9537177 | None:intergenic |
| TGAGAATCCAGATGAAGTCA+TGG | 0.556784 | 6.3:+9536457 | MS.gene86150:CDS |
| CCAACAAAGTATCGGAAGAT+GGG | 0.560580 | 6.3:+9539369 | MS.gene86150:CDS |
| AGTTAGCAGACTTTGCTTGG+AGG | 0.561124 | 6.3:+9535695 | MS.gene86150:CDS |
| CTCAGCGAACTGCCAAACCA+TGG | 0.568365 | 6.3:-9539403 | None:intergenic |
| TCGATAGCTTCTTAAAAGAG+TGG | 0.570671 | 6.3:+9536761 | MS.gene86150:CDS |
| TCAGCGAACTGCCAAACCAT+GGG | 0.571831 | 6.3:-9539402 | None:intergenic |
| TGATGATGAAGTTGAACTAT+GGG | 0.573567 | 6.3:+9538586 | MS.gene86150:CDS |
| GATGGGTCCCAGGCAGCCCA+TGG | 0.574669 | 6.3:+9539386 | MS.gene86150:CDS |
| TATGGGAAAGTGGTTGGAGC+TGG | 0.579039 | 6.3:+9535734 | MS.gene86150:CDS |
| AGTATCGGAAGATGGGTCCC+AGG | 0.587712 | 6.3:+9539376 | MS.gene86150:CDS |
| CTGGGCTGATGCTGGTCCCG+AGG | 0.590869 | 6.3:+9534446 | MS.gene86150:CDS |
| GAAGTTAATTGACTGTAAGA+TGG | 0.595278 | 6.3:+9538628 | MS.gene86150:CDS |
| CATTCAGGCCAACAAAGTAT+CGG | 0.596565 | 6.3:+9539361 | MS.gene86150:CDS |
| TGAGAACAAAGCTAGTGACT+TGG | 0.607952 | 6.3:+9538871 | MS.gene86150:CDS |
| AAGCAAAGTCTGCTAACTTG+AGG | 0.611744 | 6.3:-9535690 | None:intergenic |
| ATCAGCCCAGGCAAGCTCAG+AGG | 0.615538 | 6.3:-9534433 | None:intergenic |
| CTCAGAGGCGAATCGGACAA+CGG | 0.624823 | 6.3:-9534418 | None:intergenic |
| GAGATACAACATACCTAACA+AGG | 0.636279 | 6.3:-9538670 | None:intergenic |
| CATGGTTTGGCAGTTCGCTG+AGG | 0.644442 | 6.3:+9539404 | MS.gene86150:CDS |
| GAATCGGACAACGGAAAGAG+CGG | 0.648134 | 6.3:-9534409 | None:intergenic |
| AAGTAGCAAGATAATTGGTG+AGG | 0.654137 | 6.3:-9537077 | None:intergenic |
| CGCACAAACAACCATGACGA+CGG | 0.654703 | 6.3:+9534362 | None:intergenic |
| AACAAAGCTAGTGACTTGGA+GGG | 0.674755 | 6.3:+9538875 | MS.gene86150:CDS |
| GCAGCCAAATGAAAAGCCTG+CGG | 0.678328 | 6.3:+9536514 | MS.gene86150:CDS |
| ACAAACAACCATGACGACGG+TGG | 0.690644 | 6.3:+9534365 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+AGG | - | chr6.3:9536012-9535993 | None:intergenic | 0.0% |
| !!! | TTTTTTTTTAAATAAAATTA+AGG | + | chr6.3:9535077-9535096 | MS.gene86150:intron | 0.0% |
| !! | TAATTTAATTGTTATATATG+TGG | - | chr6.3:9539014-9539033 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTTGTTGTT+GGG | + | chr6.3:9534884-9534903 | MS.gene86150:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTTGTTGT+TGG | + | chr6.3:9534883-9534902 | MS.gene86150:intron | 10.0% |
| !! | AAATTTCTTATGAACTTATT+AGG | + | chr6.3:9538468-9538487 | MS.gene86150:CDS | 15.0% |
| !! | AATTTCTTATGAACTTATTA+GGG | + | chr6.3:9538469-9538488 | MS.gene86150:CDS | 15.0% |
| !! | ATAATACAAAAGAAAGAAAA+AGG | - | chr6.3:9535308-9535327 | None:intergenic | 15.0% |
| !! | TAATAAGTTCATAAGAAATT+TGG | - | chr6.3:9538469-9538488 | None:intergenic | 15.0% |
| !! | TCATATAATATAGATTCAAT+TGG | + | chr6.3:9534790-9534809 | MS.gene86150:intron | 15.0% |
| !! | TGAATTTATTAGTATTATCT+TGG | + | chr6.3:9535650-9535669 | MS.gene86150:intron | 15.0% |
| !!! | AATATCTATTTTTCTCTTAT+AGG | + | chr6.3:9537384-9537403 | MS.gene86150:intron | 15.0% |
| !!! | TTTCTTAATTTGATTGTTTT+TGG | + | chr6.3:9534960-9534979 | MS.gene86150:intron | 15.0% |
| !! | AAACACCAAATTTATAATTC+TGG | - | chr6.3:9538925-9538944 | None:intergenic | 20.0% |
| !! | AAACATAATATCTTCTCAAA+AGG | + | chr6.3:9537282-9537301 | MS.gene86150:intron | 20.0% |
| !! | AATAACAGATATTGTAAACA+CGG | - | chr6.3:9536380-9536399 | None:intergenic | 20.0% |
| !! | AGTTTCCAGAATTATAAATT+TGG | + | chr6.3:9538917-9538936 | MS.gene86150:intron | 20.0% |
| !! | ATAATATAGATTCAATTGGA+AGG | + | chr6.3:9534794-9534813 | MS.gene86150:intron | 20.0% |
| !! | ATATACTAAATTAACTGTTC+AGG | - | chr6.3:9536875-9536894 | None:intergenic | 20.0% |
| !! | TAATAACTATGATTGAATGT+AGG | - | chr6.3:9537250-9537269 | None:intergenic | 20.0% |
| !! | TAGAATGATAAACAGTAATT+GGG | + | chr6.3:9535146-9535165 | MS.gene86150:intron | 20.0% |
| !! | TATACTAAATTAACTGTTCA+GGG | - | chr6.3:9536874-9536893 | None:intergenic | 20.0% |
| !! | TCACCAAAACAATAAAAAAA+TGG | - | chr6.3:9537449-9537468 | None:intergenic | 20.0% |
| !! | TCTATATCTCTATTCTAATA+TGG | - | chr6.3:9535852-9535871 | None:intergenic | 20.0% |
| !! | TTAGAATGATAAACAGTAAT+TGG | + | chr6.3:9535145-9535164 | MS.gene86150:intron | 20.0% |
| !!! | AAATGGTCTTATTTTTTTGT+TGG | + | chr6.3:9535173-9535192 | MS.gene86150:intron | 20.0% |
| !!! | AATGGTCTTATTTTTTTGTT+GGG | + | chr6.3:9535174-9535193 | MS.gene86150:intron | 20.0% |
| !!! | ATATTATGAGTGATGATTTT+TGG | + | chr6.3:9536343-9536362 | MS.gene86150:intron | 20.0% |
| !!! | ATTCAAAGTGTATACATTTT+CGG | + | chr6.3:9539149-9539168 | MS.gene86150:intron | 20.0% |
| !!! | ATTTTGTTTTTACTTCTCTT+TGG | + | chr6.3:9536893-9536912 | MS.gene86150:intron | 20.0% |
| !!! | GATCAATTTGTATAATCTTT+TGG | + | chr6.3:9536642-9536661 | MS.gene86150:CDS | 20.0% |
| !!! | TATTATGAGTGATGATTTTT+GGG | + | chr6.3:9536344-9536363 | MS.gene86150:intron | 20.0% |
| !!! | TATTTTTCGCAACATTATTA+GGG | + | chr6.3:9539190-9539209 | MS.gene86150:intron | 20.0% |
| !!! | TGAATATATTCAAGTTTACA+GGG | - | chr6.3:9539052-9539071 | None:intergenic | 20.0% |
| !!! | TTCTCAAAAATTTCTGAAAA+AGG | + | chr6.3:9535789-9535808 | MS.gene86150:CDS | 20.0% |
| !!! | TTGCCATTTTTTTATTGTTT+TGG | + | chr6.3:9537443-9537462 | MS.gene86150:intron | 20.0% |
| ! | AAAAATGAGATTGATGTCAT+TGG | + | chr6.3:9538418-9538437 | MS.gene86150:CDS | 25.0% |
| ! | AAAAATGATAGATTTGGGAA+TGG | - | chr6.3:9534492-9534511 | None:intergenic | 25.0% |
| ! | AAAATGATAGATTTGGGAAT+GGG | - | chr6.3:9534491-9534510 | None:intergenic | 25.0% |
| ! | AACCCTAAAAATGATAGATT+TGG | - | chr6.3:9534498-9534517 | None:intergenic | 25.0% |
| ! | AAGTAACTCAATTGAAACAA+TGG | - | chr6.3:9539287-9539306 | None:intergenic | 25.0% |
| ! | AATAAAATAAGTAGTCACAG+TGG | - | chr6.3:9536597-9536616 | None:intergenic | 25.0% |
| ! | ACCCTAAAAATGATAGATTT+GGG | - | chr6.3:9534497-9534516 | None:intergenic | 25.0% |
| ! | AGAAAAAGTAGCAAGATAAT+TGG | - | chr6.3:9537085-9537104 | None:intergenic | 25.0% |
| ! | AGATATTACAAGATGATAGA+CGG | - | chr6.3:9537371-9537390 | None:intergenic | 25.0% |
| ! | ATCTAATTGTCAGATTCAAT+TGG | + | chr6.3:9535118-9535137 | MS.gene86150:intron | 25.0% |
| ! | ATGTAATATTACATCCTACT+TGG | + | chr6.3:9536548-9536567 | MS.gene86150:intron | 25.0% |
| ! | ATGTTTCACAGATAATTGAT+TGG | + | chr6.3:9536316-9536335 | MS.gene86150:intron | 25.0% |
| ! | CTGTAAACTTGAATATATTC+AGG | + | chr6.3:9539051-9539070 | MS.gene86150:intron | 25.0% |
| ! | GTGTTGTATATAAGTGAAAT+TGG | + | chr6.3:9534578-9534597 | MS.gene86150:intron | 25.0% |
| ! | TCAAAATTTCAAAACCAAGT+AGG | - | chr6.3:9536565-9536584 | None:intergenic | 25.0% |
| ! | TCGAAAATACCTGTATTATA+GGG | - | chr6.3:9538978-9538997 | None:intergenic | 25.0% |
| ! | TCTATACAAGTGAATGTAAA+TGG | + | chr6.3:9534928-9534947 | MS.gene86150:intron | 25.0% |
| ! | TCTTAAAAGAGTGGAAAATT+GGG | + | chr6.3:9536770-9536789 | MS.gene86150:CDS | 25.0% |
| ! | TGAAAATTGTGTTTGTGATA+TGG | + | chr6.3:9534676-9534695 | MS.gene86150:intron | 25.0% |
| ! | TTAACAATATTAAGACAGCT+TGG | - | chr6.3:9535875-9535894 | None:intergenic | 25.0% |
| ! | TTAGTATTATTCAGATTCTG+AGG | + | chr6.3:9537995-9538014 | MS.gene86150:intron | 25.0% |
| ! | TTATCTGTGAAACATCAAAT+TGG | - | chr6.3:9536311-9536330 | None:intergenic | 25.0% |
| ! | TTCGAAAATACCTGTATTAT+AGG | - | chr6.3:9538979-9538998 | None:intergenic | 25.0% |
| ! | TTCTTAAAAGAGTGGAAAAT+TGG | + | chr6.3:9536769-9536788 | MS.gene86150:CDS | 25.0% |
| ! | TTTACCATAGTCATTCAATA+AGG | - | chr6.3:9538276-9538295 | None:intergenic | 25.0% |
| !! | ATTTTCTGAACATCTCAAAT+TGG | - | chr6.3:9534769-9534788 | None:intergenic | 25.0% |
| !! | CAAAAATTTCTGAAAAAGGT+AGG | + | chr6.3:9535793-9535812 | MS.gene86150:intron | 25.0% |
| !! | CTGAATATATTCAAGTTTAC+AGG | - | chr6.3:9539053-9539072 | None:intergenic | 25.0% |
| !! | GTATTTTTCGCAACATTATT+AGG | + | chr6.3:9539189-9539208 | MS.gene86150:intron | 25.0% |
| !! | TAGAAAAAAGTGTATACAAC+AGG | - | chr6.3:9539123-9539142 | None:intergenic | 25.0% |
| !! | TCAAGATTTTTCTTACTCAA+AGG | + | chr6.3:9538213-9538232 | MS.gene86150:CDS | 25.0% |
| !! | TTGAAAATGATTTTGCAACT+CGG | - | chr6.3:9537512-9537531 | None:intergenic | 25.0% |
| !!! | AATTATCTTGCTACTTTTTC+TGG | + | chr6.3:9537084-9537103 | MS.gene86150:CDS | 25.0% |
| !!! | AATTTGATTGTTTTTGGTGT+TGG | + | chr6.3:9534966-9534985 | MS.gene86150:intron | 25.0% |
| !!! | ATGGTCTTATTTTTTTGTTG+GGG | + | chr6.3:9535175-9535194 | MS.gene86150:intron | 25.0% |
| !!! | ATGTTTTGAAGGAAAACAAA+AGG | + | chr6.3:9536830-9536849 | MS.gene86150:CDS | 25.0% |
| !!! | CATTTTTTGCTCTATTTGTA+GGG | + | chr6.3:9539314-9539333 | MS.gene86150:intron | 25.0% |
| !!! | TAGTATTATCTTGGTTTGTT+AGG | + | chr6.3:9535659-9535678 | MS.gene86150:intron | 25.0% |
| !!! | TCATTTTTTGCTCTATTTGT+AGG | + | chr6.3:9539313-9539332 | MS.gene86150:intron | 25.0% |
| !!! | TCCCAAATCTATCATTTTTA+GGG | + | chr6.3:9534493-9534512 | MS.gene86150:intron | 25.0% |
| !!! | TTCCCAAATCTATCATTTTT+AGG | + | chr6.3:9534492-9534511 | MS.gene86150:intron | 25.0% |
| !!! | TTTTAGGGTTTCTTGATTTT+GGG | + | chr6.3:9534508-9534527 | MS.gene86150:intron | 25.0% |
| !!! | TTTTGAGAAAATCAATTCAG+CGG | - | chr6.3:9535778-9535797 | None:intergenic | 25.0% |
| !!! | TTTTTAGGGTTTCTTGATTT+TGG | + | chr6.3:9534507-9534526 | MS.gene86150:intron | 25.0% |
| AAAAAATAGCTACAGCCATT+AGG | - | chr6.3:9538738-9538757 | None:intergenic | 30.0% | |
| AAATACTGTTCATGCACAAT+TGG | + | chr6.3:9538293-9538312 | MS.gene86150:intron | 30.0% | |
| AACAGTAATTGGGTTTGAAA+TGG | + | chr6.3:9535156-9535175 | MS.gene86150:intron | 30.0% | |
| AATCTTTACAATCAGCAAGT+GGG | + | chr6.3:9537911-9537930 | MS.gene86150:intron | 30.0% | |
| ACAAGTGAATGTAAATGGTT+TGG | + | chr6.3:9534933-9534952 | MS.gene86150:intron | 30.0% | |
| ATATTCAGGAGCTAATTACT+TGG | + | chr6.3:9539065-9539084 | MS.gene86150:intron | 30.0% | |
| ATTGCAGATAATAGTGAAGA+TGG | - | chr6.3:9536423-9536442 | None:intergenic | 30.0% | |
| CAAATTGTTATCAAGTACAC+AGG | - | chr6.3:9539239-9539258 | None:intergenic | 30.0% | |
| CAGAACTGGATAATAAATTC+TGG | - | chr6.3:9536157-9536176 | None:intergenic | 30.0% | |
| CAGTTGTTACTGAATACAAA+GGG | - | chr6.3:9536051-9536070 | None:intergenic | 30.0% | |
| CTGATATAACAGAGCATATT+TGG | - | chr6.3:9538189-9538208 | None:intergenic | 30.0% | |
| GAAGTTAATTGACTGTAAGA+TGG | + | chr6.3:9538628-9538647 | MS.gene86150:CDS | 30.0% | |
| GTTAAGTCACAAAAAGAAAG+AGG | - | chr6.3:9537656-9537675 | None:intergenic | 30.0% | |
| TAATCTTTACAATCAGCAAG+TGG | + | chr6.3:9537910-9537929 | MS.gene86150:intron | 30.0% | |
| TATAGATTCAATTGGAAGGT+TGG | + | chr6.3:9534798-9534817 | MS.gene86150:intron | 30.0% | |
| TATCTTCTCAAAAGGTGATA+AGG | + | chr6.3:9537290-9537309 | MS.gene86150:intron | 30.0% | |
| TCAGTTGTTACTGAATACAA+AGG | - | chr6.3:9536052-9536071 | None:intergenic | 30.0% | |
| TCATCATCATTGATCTGAAA+GGG | - | chr6.3:9538575-9538594 | None:intergenic | 30.0% | |
| TGAAGTGATAGGATTAGAAA+TGG | + | chr6.3:9535349-9535368 | MS.gene86150:intron | 30.0% | |
| TGCAACATTTGAATTATGCT+AGG | - | chr6.3:9538549-9538568 | None:intergenic | 30.0% | |
| TTCAAGTCTTACCACAAATT+CGG | - | chr6.3:9535333-9535352 | None:intergenic | 30.0% | |
| TTCATCATCATTGATCTGAA+AGG | - | chr6.3:9538576-9538595 | None:intergenic | 30.0% | |
| TTCCTTCAAAACATTAGAGA+TGG | - | chr6.3:9536824-9536843 | None:intergenic | 30.0% | |
| TTGTATTATTGCCGAATTTG+TGG | + | chr6.3:9535319-9535338 | MS.gene86150:intron | 30.0% | |
| TTTATCCCGAGTCATAAATA+AGG | - | chr6.3:9537831-9537850 | None:intergenic | 30.0% | |
| TTTGTATTCAGTAACAACTG+AGG | + | chr6.3:9536051-9536070 | MS.gene86150:intron | 30.0% | |
| ! | AGGTAACTTGTGTAAAAATG+AGG | + | chr6.3:9537190-9537209 | MS.gene86150:intron | 30.0% |
| ! | ATGATGATGAAGTTGAACTA+TGG | + | chr6.3:9538585-9538604 | MS.gene86150:CDS | 30.0% |
| ! | ATTATCCAGTTCTGATAGTT+TGG | + | chr6.3:9536163-9536182 | MS.gene86150:intron | 30.0% |
| ! | CTATCGATCTTTTTGAATGA+AGG | - | chr6.3:9536748-9536767 | None:intergenic | 30.0% |
| ! | GAATTGATGTTATTTGTGAG+CGG | + | chr6.3:9535587-9535606 | MS.gene86150:intron | 30.0% |
| ! | TGATGATGAAGTTGAACTAT+GGG | + | chr6.3:9538586-9538605 | MS.gene86150:CDS | 30.0% |
| ! | TTTTTATCTCAGCATGTCAA+AGG | + | chr6.3:9537041-9537060 | MS.gene86150:intron | 30.0% |
| !! | CTATTTTTCTCTTATAGGCA+TGG | + | chr6.3:9537389-9537408 | MS.gene86150:intron | 30.0% |
| !! | TTTAGGGTTTCTTGATTTTG+GGG | + | chr6.3:9534509-9534528 | MS.gene86150:intron | 30.0% |
| !!! | TGCAATTGTTGATTTTGTGA+AGG | + | chr6.3:9537152-9537171 | MS.gene86150:CDS | 30.0% |
| !!! | TGGTCTTATTTTTTTGTTGG+GGG | + | chr6.3:9535176-9535195 | MS.gene86150:intron | 30.0% |
| !!! | TTTTTACTTCTCTTTGGAGT+AGG | + | chr6.3:9536899-9536918 | MS.gene86150:intron | 30.0% |
| AAATGTGATCAGTACCATTC+AGG | + | chr6.3:9539346-9539365 | MS.gene86150:CDS | 35.0% | |
| AAGTAGCAAGATAATTGGTG+AGG | - | chr6.3:9537080-9537099 | None:intergenic | 35.0% | |
| AATTCATTGCTATGGGAAAG+TGG | + | chr6.3:9535724-9535743 | MS.gene86150:CDS | 35.0% | |
| ACATTTAGGTAGAAACACAG+TGG | - | chr6.3:9538350-9538369 | None:intergenic | 35.0% | |
| ACCATAGTCATTCAATAAGG+TGG | - | chr6.3:9538273-9538292 | None:intergenic | 35.0% | |
| AGCAAATGTTAGAGTAGTTG+AGG | + | chr6.3:9535487-9535506 | MS.gene86150:intron | 35.0% | |
| AGTCACAAAAAGAAAGAGGT+TGG | - | chr6.3:9537652-9537671 | None:intergenic | 35.0% | |
| CAAGGACAACTTGATTCATT+TGG | - | chr6.3:9538655-9538674 | None:intergenic | 35.0% | |
| CAGTAAATCACACTACAACA+TGG | - | chr6.3:9538132-9538151 | None:intergenic | 35.0% | |
| CATGTTGTAGTGTGATTTAC+TGG | + | chr6.3:9538130-9538149 | MS.gene86150:intron | 35.0% | |
| CCTTCATGTAGACATAAAAC+TGG | - | chr6.3:9536681-9536700 | None:intergenic | 35.0% | |
| CTATGATTGAATGTAGGTGA+CGG | - | chr6.3:9537244-9537263 | None:intergenic | 35.0% | |
| CTCTAGGCATCAAATAAAAC+TGG | - | chr6.3:9537716-9537735 | None:intergenic | 35.0% | |
| GAGATACAACATACCTAACA+AGG | - | chr6.3:9538673-9538692 | None:intergenic | 35.0% | |
| GAGATTGTGTTGTGGATATA+TGG | - | chr6.3:9536977-9536996 | None:intergenic | 35.0% | |
| GCAAATGTTAGAGTAGTTGA+GGG | + | chr6.3:9535488-9535507 | MS.gene86150:intron | 35.0% | |
| GCATATAAAGAGAAGACATG+TGG | + | chr6.3:9535445-9535464 | MS.gene86150:intron | 35.0% | |
| GCTGAAGAATTCATTGCTAT+GGG | + | chr6.3:9535717-9535736 | MS.gene86150:CDS | 35.0% | |
| TAGACATAAAACTGGCAGTA+TGG | - | chr6.3:9536673-9536692 | None:intergenic | 35.0% | |
| TAGAGAATATTCAACACTGC+AGG | - | chr6.3:9538083-9538102 | None:intergenic | 35.0% | |
| TATGATTACTAGCGAAGTCA+TGG | - | chr6.3:9537785-9537804 | None:intergenic | 35.0% | |
| TCCACCTTATTGAATGACTA+TGG | + | chr6.3:9538269-9538288 | MS.gene86150:CDS | 35.0% | |
| TCGATAGCTTCTTAAAAGAG+TGG | + | chr6.3:9536761-9536780 | MS.gene86150:CDS | 35.0% | |
| TGATGCAATCCCTATAATAC+AGG | + | chr6.3:9538966-9538985 | MS.gene86150:intron | 35.0% | |
| TTAGGGAATGTGAAAGTTGA+AGG | + | chr6.3:9535248-9535267 | MS.gene86150:intron | 35.0% | |
| TTCAACCAAACTATCAGAAC+TGG | - | chr6.3:9536171-9536190 | None:intergenic | 35.0% | |
| TTTATTTGATGCCTAGAGTG+AGG | + | chr6.3:9537718-9537737 | MS.gene86150:intron | 35.0% | |
| ! | TAGAACTTCTGTTTGCCTTT+TGG | + | chr6.3:9537344-9537363 | MS.gene86150:intron | 35.0% |
| ! | TGAATCAAGTTGTCCTTGTT+AGG | + | chr6.3:9538657-9538676 | MS.gene86150:CDS | 35.0% |
| !! | CACCATCTCTAATGTTTTGA+AGG | + | chr6.3:9536819-9536838 | MS.gene86150:CDS | 35.0% |
| !! | CCAGTTTTATGTCTACATGA+AGG | + | chr6.3:9536678-9536697 | MS.gene86150:CDS | 35.0% |
| !! | CTACATGAAGGCATTGAATT+TGG | + | chr6.3:9536690-9536709 | MS.gene86150:CDS | 35.0% |
| !! | GAAATGTGTTTGTTGTGCTA+TGG | + | chr6.3:9535035-9535054 | MS.gene86150:intron | 35.0% |
| !! | GTTTCTTGATTTTGGGGATT+TGG | + | chr6.3:9534515-9534534 | MS.gene86150:intron | 35.0% |
| !! | TTGCTGCCTTATTTATGACT+CGG | + | chr6.3:9537822-9537841 | MS.gene86150:intron | 35.0% |
| !!! | TCTTATTTTTTTGTTGGGGG+CGG | + | chr6.3:9535179-9535198 | MS.gene86150:intron | 35.0% |
| !!! | TTTTTTTTGTTGTTGGGTCG+TGG | + | chr6.3:9534890-9534909 | MS.gene86150:intron | 35.0% |
| AAAAAGGTAGGATGCTCTTC+TGG | + | chr6.3:9535805-9535824 | MS.gene86150:intron | 40.0% | |
| AAGATGATAGACGGTCCAAA+AGG | - | chr6.3:9537362-9537381 | None:intergenic | 40.0% | |
| AAGCAAAGTCTGCTAACTTG+AGG | - | chr6.3:9535693-9535712 | None:intergenic | 40.0% | |
| ACAATCTCCATGACTTCATC+TGG | - | chr6.3:9536467-9536486 | None:intergenic | 40.0% | |
| ACCATTCCTAGTCTCTCTTA+TGG | - | chr6.3:9537744-9537763 | None:intergenic | 40.0% | |
| ACTTATTAGGGACACACTTC+AGG | + | chr6.3:9538481-9538500 | MS.gene86150:CDS | 40.0% | |
| ATCAAGCAGCAAAACAACTG+AGG | - | chr6.3:9536231-9536250 | None:intergenic | 40.0% | |
| CAAGTTACCTGAAATACGTC+AGG | - | chr6.3:9537180-9537199 | None:intergenic | 40.0% | |
| CAATGCATTCTTCATGCACA+AGG | - | chr6.3:9538397-9538416 | None:intergenic | 40.0% | |
| CATTCAGGCCAACAAAGTAT+CGG | + | chr6.3:9539361-9539380 | MS.gene86150:CDS | 40.0% | |
| CCTATAGTAAGACTAGATGG+TGG | + | chr6.3:9535400-9535419 | MS.gene86150:intron | 40.0% | |
| GAAGAACAGAGATTGTGTTG+TGG | - | chr6.3:9536985-9537004 | None:intergenic | 40.0% | |
| GAGTCATAAATAAGGCAGCA+AGG | - | chr6.3:9537823-9537842 | None:intergenic | 40.0% | |
| GATTCAATTGGAAGGTTGGA+TGG | + | chr6.3:9534802-9534821 | MS.gene86150:intron | 40.0% | |
| GCACCTATAGTAAGACTAGA+TGG | + | chr6.3:9535397-9535416 | MS.gene86150:intron | 40.0% | |
| GCATGTAGAGATGATCCTAA+TGG | + | chr6.3:9538720-9538739 | MS.gene86150:intron | 40.0% | |
| GCATTGAATTTGGCTGTTGA+TGG | + | chr6.3:9536700-9536719 | MS.gene86150:CDS | 40.0% | |
| GGATCGAGTGTAATTGTGTT+CGG | + | chr6.3:9534987-9535006 | MS.gene86150:intron | 40.0% | |
| GGCTGAAGAATTCATTGCTA+TGG | + | chr6.3:9535716-9535735 | MS.gene86150:CDS | 40.0% | |
| GTGGTAAGACTTGAAGTGAT+AGG | + | chr6.3:9535338-9535357 | MS.gene86150:intron | 40.0% | |
| GTTACGATGTTACGTTACCT+CGG | - | chr6.3:9534466-9534485 | None:intergenic | 40.0% | |
| GTTAGACTACCTTGCTTAGA+TGG | + | chr6.3:9538028-9538047 | MS.gene86150:intron | 40.0% | |
| TCAAGTTAGCAGACTTTGCT+TGG | + | chr6.3:9535692-9535711 | MS.gene86150:CDS | 40.0% | |
| TCATAGTTATTAGTCGCAGC+TGG | + | chr6.3:9537258-9537277 | MS.gene86150:intron | 40.0% | |
| TGAGAACAAAGCTAGTGACT+TGG | + | chr6.3:9538871-9538890 | MS.gene86150:CDS | 40.0% | |
| TGAGAATCCAGATGAAGTCA+TGG | + | chr6.3:9536457-9536476 | MS.gene86150:CDS | 40.0% | |
| TGTGGATATATGGCTACGAA+TGG | - | chr6.3:9536967-9536986 | None:intergenic | 40.0% | |
| TTACGATGTTACGTTACCTC+GGG | - | chr6.3:9534465-9534484 | None:intergenic | 40.0% | |
| TTTAGTGATCTGTGTACAGC+TGG | + | chr6.3:9535945-9535964 | MS.gene86150:intron | 40.0% | |
| ! | AAACTGGGCTTAGGTTGTTT+GGG | + | chr6.3:9535423-9535442 | MS.gene86150:intron | 40.0% |
| ! | AACAAAGCTAGTGACTTGGA+GGG | + | chr6.3:9538875-9538894 | MS.gene86150:CDS | 40.0% |
| ! | AATTTTCACAGCGATTCCAC+TGG | - | chr6.3:9537483-9537502 | None:intergenic | 40.0% |
| ! | CTAGCCTTTCTTCTGCTATA+GGG | + | chr6.3:9538698-9538717 | MS.gene86150:intron | 40.0% |
| ! | TCTAGCCTTTCTTCTGCTAT+AGG | + | chr6.3:9538697-9538716 | MS.gene86150:intron | 40.0% |
| ! | TTGGGGATTTGGATGGTTTT+GGG | + | chr6.3:9534526-9534545 | MS.gene86150:intron | 40.0% |
| ! | TTTGGGGATTTGGATGGTTT+TGG | + | chr6.3:9534525-9534544 | MS.gene86150:intron | 40.0% |
| !! | AAGACTAGATGGTGGAAACT+GGG | + | chr6.3:9535408-9535427 | MS.gene86150:intron | 40.0% |
| !! | CCAACAAAGTATCGGAAGAT+GGG | + | chr6.3:9539369-9539388 | MS.gene86150:CDS | 40.0% |
| !! | CCACCATCTAGTCTTACTAT+AGG | - | chr6.3:9535403-9535422 | None:intergenic | 40.0% |
| !! | CTTGATTTTGGGGATTTGGA+TGG | + | chr6.3:9534519-9534538 | MS.gene86150:intron | 40.0% |
| !! | GCATGTTTTGAGTGAAGCTA+AGG | + | chr6.3:9537116-9537135 | MS.gene86150:CDS | 40.0% |
| !! | GCTTGATGATGTTGTATCTG+TGG | + | chr6.3:9536244-9536263 | MS.gene86150:intron | 40.0% |
| !! | TAAGACTAGATGGTGGAAAC+TGG | + | chr6.3:9535407-9535426 | MS.gene86150:intron | 40.0% |
| !! | TGCTGCCTTATTTATGACTC+GGG | + | chr6.3:9537823-9537842 | MS.gene86150:intron | 40.0% |
| !! | TGTTTTGAGTGAAGCTAAGG+AGG | + | chr6.3:9537119-9537138 | MS.gene86150:CDS | 40.0% |
| !!! | TGCTACTTTTTCTGGAGAAG+AGG | + | chr6.3:9537092-9537111 | MS.gene86150:CDS | 40.0% |
| ACGAAAATCGCATTCCGGAA+TGG | - | chr6.3:9539099-9539118 | None:intergenic | 45.0% | |
| AGAAACAGCTCTCTCTGTTC+TGG | - | chr6.3:9536799-9536818 | None:intergenic | 45.0% | |
| AGACATGTGGATGTCGTTGA+AGG | + | chr6.3:9535458-9535477 | MS.gene86150:intron | 45.0% | |
| AGGTAGAAACACAGTGGAAG+AGG | - | chr6.3:9538344-9538363 | None:intergenic | 45.0% | |
| AGTTAGCAGACTTTGCTTGG+AGG | + | chr6.3:9535695-9535714 | MS.gene86150:CDS | 45.0% | |
| CATGCCCTATAGCAGAAGAA+AGG | - | chr6.3:9538705-9538724 | None:intergenic | 45.0% | |
| CATTGCTATGGGAAAGTGGT+TGG | + | chr6.3:9535728-9535747 | MS.gene86150:CDS | 45.0% | |
| CCCATCTTCCGATACTTTGT+TGG | - | chr6.3:9539372-9539391 | None:intergenic | 45.0% | |
| CTGGAAAAGATGTGTCGCAA+AGG | - | chr6.3:9537579-9537598 | None:intergenic | 45.0% | |
| GCCATAAGAGAGACTAGGAA+TGG | + | chr6.3:9537740-9537759 | MS.gene86150:intron | 45.0% | |
| GGAATGATGCAATGCAACAG+TGG | + | chr6.3:9534831-9534850 | MS.gene86150:intron | 45.0% | |
| GGTAGAAACACAGTGGAAGA+GGG | - | chr6.3:9538343-9538362 | None:intergenic | 45.0% | |
| GTTGCAGTCTCTTCTCTTTC+TGG | + | chr6.3:9537607-9537626 | MS.gene86150:intron | 45.0% | |
| TCGGTGTGTGTTGTGTATGA+TGG | + | chr6.3:9535006-9535025 | MS.gene86150:intron | 45.0% | |
| TGTGCAGTCATCACACTGAT+CGG | + | chr6.3:9538820-9538839 | MS.gene86150:intron | 45.0% | |
| TGTTAGAGTAGTTGAGGGCA+TGG | + | chr6.3:9535493-9535512 | MS.gene86150:intron | 45.0% | |
| ! | CGATACTTTGTTGGCCTGAA+TGG | - | chr6.3:9539363-9539382 | None:intergenic | 45.0% |
| ! | GAAACTGGGCTTAGGTTGTT+TGG | + | chr6.3:9535422-9535441 | MS.gene86150:intron | 45.0% |
| ! | GAACAAAGCTAGTGACTTGG+AGG | + | chr6.3:9538874-9538893 | MS.gene86150:CDS | 45.0% |
| ! | GAGGGCATGGAAAAAGTTGA+AGG | + | chr6.3:9535506-9535525 | MS.gene86150:intron | 45.0% |
| ! | GTGAAGATGGACTCTACATC+TGG | - | chr6.3:9536410-9536429 | None:intergenic | 45.0% |
| ! | TTGGTTGATCTCAGCTCTGA+TGG | + | chr6.3:9538437-9538456 | MS.gene86150:CDS | 45.0% |
| !! | ACTTGGTTCTGAAGCCATTC+CGG | + | chr6.3:9539082-9539101 | MS.gene86150:intron | 45.0% |
| !! | GCCAACAAAGTATCGGAAGA+TGG | + | chr6.3:9539368-9539387 | MS.gene86150:CDS | 45.0% |
| !! | GCTGTGTTGTTTGTGGCTTA+GGG | + | chr6.3:9535231-9535250 | MS.gene86150:intron | 45.0% |
| !! | GGATGATGCTGTGTTGTTTG+TGG | + | chr6.3:9535224-9535243 | MS.gene86150:intron | 45.0% |
| !! | TGCTGTGTTGTTTGTGGCTT+AGG | + | chr6.3:9535230-9535249 | MS.gene86150:intron | 45.0% |
| !! | TGGGGATTTGGATGGTTTTG+GGG | + | chr6.3:9534527-9534546 | MS.gene86150:intron | 45.0% |
| !!! | TATTTTTTTGTTGGGGGCGG+CGG | + | chr6.3:9535182-9535201 | MS.gene86150:intron | 45.0% |
| CAGACTTCGCCATCTAAGCA+AGG | - | chr6.3:9538040-9538059 | None:intergenic | 50.0% | |
| CAGGCACGAAAATCGCATTC+CGG | - | chr6.3:9539104-9539123 | None:intergenic | 50.0% | |
| CATCACACTGATCGGGTGTT+TGG | + | chr6.3:9538828-9538847 | MS.gene86150:CDS | 50.0% | |
| CATGGCTTCATGGCACACAA+TGG | - | chr6.3:9537767-9537786 | None:intergenic | 50.0% | |
| CTAGCGAAGTCATGGCTTCA+TGG | - | chr6.3:9537777-9537796 | None:intergenic | 50.0% | |
| CTCTCTTATGGCCTCACTCT+AGG | - | chr6.3:9537732-9537751 | None:intergenic | 50.0% | |
| GAATCGGACAACGGAAAGAG+CGG | - | chr6.3:9534412-9534431 | None:intergenic | 50.0% | |
| GAGACTGCAACAGAGAGAAC+TGG | - | chr6.3:9537598-9537617 | None:intergenic | 50.0% | |
| GATGCAATGCAACAGTGGCT+GGG | + | chr6.3:9534836-9534855 | MS.gene86150:intron | 50.0% | |
| GCAGCCAAATGAAAAGCCTG+CGG | + | chr6.3:9536514-9536533 | MS.gene86150:CDS | 50.0% | |
| GGGTGTTTGGTCAGCATCAA+TGG | + | chr6.3:9538841-9538860 | MS.gene86150:CDS | 50.0% | |
| GTGAGGCCATAAGAGAGACT+AGG | + | chr6.3:9537735-9537754 | MS.gene86150:intron | 50.0% | |
| GTGCAGTCATCACACTGATC+GGG | + | chr6.3:9538821-9538840 | MS.gene86150:intron | 50.0% | |
| TACATCTTCAATCGCACCGC+AGG | - | chr6.3:9536533-9536552 | None:intergenic | 50.0% | |
| TACTGGACATGCCTGCTGTT+GGG | + | chr6.3:9538147-9538166 | MS.gene86150:CDS | 50.0% | |
| TATGGGAAAGTGGTTGGAGC+TGG | + | chr6.3:9535734-9535753 | MS.gene86150:CDS | 50.0% | |
| TCAGCGAACTGCCAAACCAT+GGG | - | chr6.3:9539405-9539424 | None:intergenic | 50.0% | |
| TGATGCAATGCAACAGTGGC+TGG | + | chr6.3:9534835-9534854 | MS.gene86150:intron | 50.0% | |
| TGGAAGGTTGGATGGAAGAG+TGG | + | chr6.3:9534810-9534829 | MS.gene86150:intron | 50.0% | |
| TTACTGGACATGCCTGCTGT+TGG | + | chr6.3:9538146-9538165 | MS.gene86150:CDS | 50.0% | |
| ! | GATCTCAGCTCTGATGGATC+TGG | + | chr6.3:9538443-9538462 | MS.gene86150:CDS | 50.0% |
| ! | TCACAGCGATTCCACTGGTT+CGG | - | chr6.3:9537478-9537497 | None:intergenic | 50.0% |
| !! | AGATGGTGGAAACTGGGCTT+AGG | + | chr6.3:9535414-9535433 | MS.gene86150:intron | 50.0% |
| !! | GAAGGCACCTGACGTATTTC+AGG | + | chr6.3:9537170-9537189 | MS.gene86150:CDS | 50.0% |
| AGGCAAGCTCAGAGGCGAAT+CGG | - | chr6.3:9534428-9534447 | None:intergenic | 55.0% | |
| ATTCGCCTCTGAGCTTGCCT+GGG | + | chr6.3:9534428-9534447 | MS.gene86150:CDS | 55.0% | |
| CAATGCAACAGTGGCTGGGT+TGG | + | chr6.3:9534840-9534859 | MS.gene86150:intron | 55.0% | |
| CTCAGAGGCGAATCGGACAA+CGG | - | chr6.3:9534421-9534440 | None:intergenic | 55.0% | |
| GGAAAGAGCGGCGTCTTCTT+CGG | - | chr6.3:9534400-9534419 | None:intergenic | 55.0% | |
| GGTGAGAGATTCCGAACCAG+TGG | + | chr6.3:9537464-9537483 | MS.gene86150:intron | 55.0% | |
| GTGTCGCAAAGGAAGAGACG+CGG | - | chr6.3:9537568-9537587 | None:intergenic | 55.0% | |
| TTCTCCAGTTGCCCAACAGC+AGG | - | chr6.3:9538161-9538180 | None:intergenic | 55.0% | |
| ! | AGTATCGGAAGATGGGTCCC+AGG | + | chr6.3:9539376-9539395 | MS.gene86150:CDS | 55.0% |
| ! | CGCACCGCAGGCTTTTCATT+TGG | - | chr6.3:9536521-9536540 | None:intergenic | 55.0% |
| AGAGACGCGGCAGGTAGAAG+TGG | - | chr6.3:9537555-9537574 | None:intergenic | 60.0% | |
| ATCAGCCCAGGCAAGCTCAG+AGG | - | chr6.3:9534436-9534455 | None:intergenic | 60.0% | |
| CATGCCTGCTGTTGGGCAAC+TGG | + | chr6.3:9538154-9538173 | MS.gene86150:CDS | 60.0% | |
| GATTCGCCTCTGAGCTTGCC+TGG | + | chr6.3:9534427-9534446 | MS.gene86150:CDS | 60.0% | |
| GCGGCGTCTTCTTCGGAAGT+AGG | - | chr6.3:9534393-9534412 | None:intergenic | 60.0% | |
| GGCGGTGGTTGTTGTGAGGA+GGG | + | chr6.3:9535203-9535222 | MS.gene86150:intron | 60.0% | |
| ! | TGCCAAACCATGGGCTGCCT+GGG | - | chr6.3:9539396-9539415 | None:intergenic | 60.0% |
| !!! | TTTTTTGTTGGGGGCGGCGG+CGG | + | chr6.3:9535185-9535204 | MS.gene86150:intron | 60.0% |
| CGCAAAGGAAGAGACGCGGC+AGG | - | chr6.3:9537564-9537583 | None:intergenic | 65.0% | |
| CGGCGGTGGTTGTTGTGAGG+AGG | + | chr6.3:9535202-9535221 | MS.gene86150:intron | 65.0% | |
| GAGCTTGCCTGGGCTGATGC+TGG | + | chr6.3:9534438-9534457 | MS.gene86150:CDS | 65.0% | |
| GTCCCAGGCAGCCCATGGTT+TGG | + | chr6.3:9539391-9539410 | MS.gene86150:CDS | 65.0% | |
| ! | CTGCCAAACCATGGGCTGCC+TGG | - | chr6.3:9539397-9539416 | None:intergenic | 65.0% |
| CGGCGGCGGTGGTTGTTGTG+AGG | + | chr6.3:9535199-9535218 | MS.gene86150:intron | 70.0% | |
| CTCGGGACCAGCATCAGCCC+AGG | - | chr6.3:9534448-9534467 | None:intergenic | 70.0% | |
| CTGGGCTGATGCTGGTCCCG+AGG | + | chr6.3:9534446-9534465 | MS.gene86150:CDS | 70.0% | |
| GATGGGTCCCAGGCAGCCCA+TGG | + | chr6.3:9539386-9539405 | MS.gene86150:CDS | 70.0% | |
| TTTGTTGGGGGCGGCGGCGG+TGG | + | chr6.3:9535188-9535207 | MS.gene86150:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 9534375 | 9539424 | 9534375 | ID=MS.gene86150 |
| chr6.3 | mRNA | 9534375 | 9539424 | 9534375 | ID=MS.gene86150.t1;Parent=MS.gene86150 |
| chr6.3 | exon | 9534375 | 9534467 | 9534375 | ID=MS.gene86150.t1.exon1;Parent=MS.gene86150.t1 |
| chr6.3 | CDS | 9534375 | 9534467 | 9534375 | ID=cds.MS.gene86150.t1;Parent=MS.gene86150.t1 |
| chr6.3 | exon | 9535681 | 9535810 | 9535681 | ID=MS.gene86150.t1.exon2;Parent=MS.gene86150.t1 |
| chr6.3 | CDS | 9535681 | 9535810 | 9535681 | ID=cds.MS.gene86150.t1;Parent=MS.gene86150.t1 |
| chr6.3 | exon | 9536411 | 9536549 | 9536411 | ID=MS.gene86150.t1.exon3;Parent=MS.gene86150.t1 |
| chr6.3 | CDS | 9536411 | 9536549 | 9536411 | ID=cds.MS.gene86150.t1;Parent=MS.gene86150.t1 |
| chr6.3 | exon | 9536639 | 9536851 | 9536639 | ID=MS.gene86150.t1.exon4;Parent=MS.gene86150.t1 |
| chr6.3 | CDS | 9536639 | 9536851 | 9536639 | ID=cds.MS.gene86150.t1;Parent=MS.gene86150.t1 |
| chr6.3 | exon | 9537053 | 9537191 | 9537053 | ID=MS.gene86150.t1.exon5;Parent=MS.gene86150.t1 |
| chr6.3 | CDS | 9537053 | 9537191 | 9537053 | ID=cds.MS.gene86150.t1;Parent=MS.gene86150.t1 |
| chr6.3 | exon | 9538140 | 9538290 | 9538140 | ID=MS.gene86150.t1.exon6;Parent=MS.gene86150.t1 |
| chr6.3 | CDS | 9538140 | 9538290 | 9538140 | ID=cds.MS.gene86150.t1;Parent=MS.gene86150.t1 |
| chr6.3 | exon | 9538393 | 9538502 | 9538393 | ID=MS.gene86150.t1.exon7;Parent=MS.gene86150.t1 |
| chr6.3 | CDS | 9538393 | 9538502 | 9538393 | ID=cds.MS.gene86150.t1;Parent=MS.gene86150.t1 |
| chr6.3 | exon | 9538581 | 9538678 | 9538581 | ID=MS.gene86150.t1.exon8;Parent=MS.gene86150.t1 |
| chr6.3 | CDS | 9538581 | 9538678 | 9538581 | ID=cds.MS.gene86150.t1;Parent=MS.gene86150.t1 |
| chr6.3 | exon | 9538827 | 9538896 | 9538827 | ID=MS.gene86150.t1.exon9;Parent=MS.gene86150.t1 |
| chr6.3 | CDS | 9538827 | 9538896 | 9538827 | ID=cds.MS.gene86150.t1;Parent=MS.gene86150.t1 |
| chr6.3 | exon | 9539335 | 9539424 | 9539335 | ID=MS.gene86150.t1.exon10;Parent=MS.gene86150.t1 |
| chr6.3 | CDS | 9539335 | 9539424 | 9539335 | ID=cds.MS.gene86150.t1;Parent=MS.gene86150.t1 |
| Gene Sequence |
| Protein sequence |
