Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85095.t1 | XP_003599534.2 | 93.4 | 519 | 21 | 1 | 1 | 506 | 1 | 519 | 9.30E-285 | 988.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85095.t1 | Q9FFZ1 | 62.3 | 438 | 157 | 5 | 53 | 485 | 30 | 464 | 9.8e-158 | 558.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85095.t1 | G7IZM0 | 93.4 | 519 | 21 | 1 | 1 | 506 | 1 | 519 | 6.7e-285 | 988.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049757 | MS.gene85095 | 0.843552 | 1.31E-58 | -1.69E-46 |
| MS.gene050502 | MS.gene85095 | 0.805443 | 1.33E-49 | -1.69E-46 |
| MS.gene050553 | MS.gene85095 | 0.805628 | 1.22E-49 | -1.69E-46 |
| MS.gene051521 | MS.gene85095 | 0.826511 | 2.61E-54 | -1.69E-46 |
| MS.gene052414 | MS.gene85095 | 0.817089 | 3.95E-52 | -1.69E-46 |
| MS.gene053169 | MS.gene85095 | 0.819526 | 1.11E-52 | -1.69E-46 |
| MS.gene053889 | MS.gene85095 | 0.900289 | 8.50E-78 | -1.69E-46 |
| MS.gene054556 | MS.gene85095 | 0.810565 | 1.08E-50 | -1.69E-46 |
| MS.gene055741 | MS.gene85095 | 0.849926 | 2.36E-60 | -1.69E-46 |
| MS.gene055744 | MS.gene85095 | 0.854751 | 9.99E-62 | -1.69E-46 |
| MS.gene055909 | MS.gene85095 | 0.800567 | 1.36E-48 | -1.69E-46 |
| MS.gene055911 | MS.gene85095 | 0.801912 | 7.20E-49 | -1.69E-46 |
| MS.gene057019 | MS.gene85095 | 0.809177 | 2.15E-50 | -1.69E-46 |
| MS.gene058120 | MS.gene85095 | 0.823355 | 1.45E-53 | -1.69E-46 |
| MS.gene058948 | MS.gene85095 | 0.807236 | 5.58E-50 | -1.69E-46 |
| MS.gene059674 | MS.gene85095 | 0.801043 | 1.08E-48 | -1.69E-46 |
| MS.gene059717 | MS.gene85095 | 0.816469 | 5.44E-52 | -1.69E-46 |
| MS.gene060372 | MS.gene85095 | 0.870517 | 1.37E-66 | -1.69E-46 |
| MS.gene06097 | MS.gene85095 | 0.810587 | 1.07E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85095.t1 | MTR_3g034670 | 93.449 | 519 | 21 | 1 | 1 | 506 | 1 | 519 | 0.0 | 988 |
| MS.gene85095.t1 | MTR_8g077185 | 28.763 | 372 | 210 | 12 | 82 | 443 | 45 | 371 | 6.81e-31 | 123 |
| MS.gene85095.t1 | MTR_5g056200 | 25.231 | 325 | 205 | 9 | 120 | 444 | 61 | 347 | 3.79e-25 | 106 |
| MS.gene85095.t1 | MTR_1g076920 | 24.501 | 351 | 201 | 13 | 108 | 437 | 83 | 390 | 1.44e-20 | 94.0 |
| MS.gene85095.t1 | MTR_4g036495 | 26.250 | 320 | 178 | 10 | 126 | 439 | 411 | 678 | 5.87e-20 | 94.0 |
| MS.gene85095.t1 | MTR_3g036050 | 34.503 | 171 | 90 | 5 | 257 | 414 | 809 | 970 | 2.20e-19 | 92.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85095.t1 | AT5G13800 | 66.667 | 438 | 138 | 5 | 53 | 485 | 53 | 487 | 0.0 | 607 |
| MS.gene85095.t1 | AT5G13800 | 66.667 | 438 | 138 | 5 | 53 | 485 | 30 | 464 | 0.0 | 607 |
| MS.gene85095.t1 | AT5G13800 | 66.667 | 438 | 138 | 5 | 53 | 485 | 30 | 464 | 0.0 | 607 |
| MS.gene85095.t1 | AT5G13800 | 70.213 | 376 | 106 | 4 | 53 | 425 | 30 | 402 | 0.0 | 556 |
| MS.gene85095.t1 | AT4G36530 | 29.609 | 358 | 172 | 13 | 103 | 434 | 2 | 305 | 3.70e-28 | 114 |
| MS.gene85095.t1 | AT4G36530 | 29.942 | 344 | 189 | 12 | 103 | 434 | 59 | 362 | 1.02e-27 | 114 |
| MS.gene85095.t1 | AT5G19850 | 25.301 | 332 | 209 | 10 | 103 | 434 | 64 | 356 | 4.24e-23 | 101 |
| MS.gene85095.t1 | AT4G25290 | 26.444 | 329 | 177 | 11 | 120 | 440 | 402 | 673 | 3.46e-18 | 88.2 |
Find 114 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTGTATTCGGTTGATTTA+TGG | 0.184371 | 3.4:-26162556 | MS.gene85095:CDS |
| CACTAAAAGACTCAAATTTA+AGG | 0.189165 | 3.4:-26163020 | MS.gene85095:CDS |
| TCATAATGAACATTCAATTT+AGG | 0.203184 | 3.4:+26162836 | None:intergenic |
| CTAACTCCCTTTCAATAGTT+TGG | 0.243271 | 3.4:+26160460 | None:intergenic |
| TATGGGGACTTCAGGTTAAA+AGG | 0.267598 | 3.4:-26161072 | MS.gene85095:CDS |
| AATGTTTCGCCTTGGGGTTT+TGG | 0.273427 | 3.4:-26162608 | MS.gene85095:CDS |
| ATCCTTGGGTGACACCTATA+TGG | 0.274359 | 3.4:-26161090 | MS.gene85095:CDS |
| GAGAAGCAGTTGATGGATTT+AGG | 0.290761 | 3.4:-26162737 | MS.gene85095:CDS |
| TGCCTCTAGTGTCTCACTTT+GGG | 0.296121 | 3.4:-26160391 | MS.gene85095:CDS |
| GCAGGGCTGATTTGATAATA+TGG | 0.296955 | 3.4:+26161034 | None:intergenic |
| AGATTCAACTACCACCTTCT+TGG | 0.299084 | 3.4:+26160332 | None:intergenic |
| TATTGCTGATGTACTTAATC+AGG | 0.309203 | 3.4:-26161383 | MS.gene85095:CDS |
| ATTTGATAATATGGAGCTTC+AGG | 0.315570 | 3.4:+26161043 | None:intergenic |
| AAGTGGAAATGTTTCGCCTT+GGG | 0.326657 | 3.4:-26162615 | MS.gene85095:CDS |
| GTCAGTTTCTTTATATTTGA+AGG | 0.331884 | 3.4:+26161709 | None:intergenic |
| GGCGACTGAGCTTGTGTATT+CGG | 0.337582 | 3.4:-26162567 | MS.gene85095:CDS |
| CTCAAATTTAAGGTTAATAG+TGG | 0.351895 | 3.4:-26163010 | MS.gene85095:CDS |
| GATGAAGGAAGAGATATTGT+AGG | 0.356457 | 3.4:-26162959 | MS.gene85095:CDS |
| AGATCCTGCTCCTTTGTCTA+AGG | 0.359553 | 3.4:-26162654 | MS.gene85095:CDS |
| AAAATGGAAACTCTTTCATA+TGG | 0.371871 | 3.4:-26163202 | MS.gene85095:CDS |
| GCTCCTTTGTCTAAGGTAGA+AGG | 0.380700 | 3.4:-26162647 | MS.gene85095:CDS |
| AAGGTTAATAGTGGAAGTTT+TGG | 0.381666 | 3.4:-26163001 | MS.gene85095:CDS |
| TCATTATGAGAAGCAGTTGA+TGG | 0.388498 | 3.4:-26162744 | MS.gene85095:CDS |
| GCTGAAGGATAATTCTCCTT+GGG | 0.395504 | 3.4:+26161255 | None:intergenic |
| GTCATAAATTTCTTACTTCG+TGG | 0.404663 | 3.4:-26160552 | MS.gene85095:CDS |
| AACTACCACCTTCTTGGACT+TGG | 0.406230 | 3.4:+26160338 | None:intergenic |
| TTGCCTCTAGTGTCTCACTT+TGG | 0.408372 | 3.4:-26160392 | MS.gene85095:CDS |
| CGCTGAAGGATAATTCTCCT+TGG | 0.410914 | 3.4:+26161254 | None:intergenic |
| GACACCTATATGGGGACTTC+AGG | 0.417003 | 3.4:-26161080 | MS.gene85095:CDS |
| GTCATCAACAAAGTGGGTTT+AGG | 0.422259 | 3.4:-26163063 | MS.gene85095:CDS |
| GCAAATGAGGCTGCAGCAGC+AGG | 0.429355 | 3.4:+26161295 | None:intergenic |
| TTAACCTGAAGTCCCCATAT+AGG | 0.431257 | 3.4:+26161076 | None:intergenic |
| CTCCTTTGTCTAAGGTAGAA+GGG | 0.432227 | 3.4:-26162646 | MS.gene85095:CDS |
| TCCTTGGGTGACACCTATAT+GGG | 0.437100 | 3.4:-26161089 | MS.gene85095:CDS |
| ATGAAGGAAGAGATATTGTA+GGG | 0.437799 | 3.4:-26162958 | MS.gene85095:CDS |
| GTTTGAATTCAACTCAATCA+AGG | 0.438343 | 3.4:-26163126 | MS.gene85095:CDS |
| CAAGTGGAAATGTTTCGCCT+TGG | 0.442422 | 3.4:-26162616 | MS.gene85095:CDS |
| ATTTATGGCAAGATCAAGTT+CGG | 0.451015 | 3.4:-26162541 | MS.gene85095:CDS |
| TTCTTTATATTTGAAGGTAG+AGG | 0.455798 | 3.4:+26161715 | None:intergenic |
| GGTGAACCAGTCTATATTGT+AGG | 0.458199 | 3.4:-26161898 | MS.gene85095:CDS |
| TGGACTTGGAATAGAATTTG+AGG | 0.460555 | 3.4:+26160352 | None:intergenic |
| TTTCCGTACATGAGGCAAAT+CGG | 0.461535 | 3.4:+26161118 | None:intergenic |
| TCATGAGGGCAGTGACCAGC+AGG | 0.463365 | 3.4:+26161016 | None:intergenic |
| TGTACGGAAAAGAAGATCCT+TGG | 0.467384 | 3.4:-26161105 | MS.gene85095:CDS |
| CCAAATCCAGTAAAATCTCC+TGG | 0.468602 | 3.4:-26161772 | MS.gene85095:CDS |
| TAAATTTCTTACTTCGTGGA+TGG | 0.469086 | 3.4:-26160548 | MS.gene85095:CDS |
| GTTACACCTTTCACTAAATG+AGG | 0.478531 | 3.4:+26161829 | None:intergenic |
| GATTCGCCAAAGTATTTCCA+TGG | 0.479281 | 3.4:-26161750 | MS.gene85095:CDS |
| GGTTGATGTACCTGCTTCAA+AGG | 0.488420 | 3.4:-26162936 | MS.gene85095:CDS |
| GCCAAAGTATTTCCATGGGC+CGG | 0.493539 | 3.4:-26161745 | MS.gene85095:CDS |
| TATTATCAAATCAGCCCTGC+TGG | 0.494080 | 3.4:-26161031 | MS.gene85095:CDS |
| TGAAGGTAGAGGGAATGTTC+CGG | 0.494970 | 3.4:+26161726 | None:intergenic |
| TCCGGCCCATGGAAATACTT+TGG | 0.499369 | 3.4:+26161744 | None:intergenic |
| GGAAATACTTTGGCGAATCC+AGG | 0.499575 | 3.4:+26161754 | None:intergenic |
| CGCAGATCATTCCATAAATG+TGG | 0.503615 | 3.4:-26161356 | MS.gene85095:CDS |
| CCTTGATAATGTTTCGCTGA+AGG | 0.506677 | 3.4:+26161240 | None:intergenic |
| GAAAAGGGTCATCAACAAAG+TGG | 0.510198 | 3.4:-26163070 | MS.gene85095:CDS |
| TATAAACCAAACTATTGAAA+GGG | 0.510732 | 3.4:-26160466 | MS.gene85095:CDS |
| GATTCACCGTTAGATTCATC+CGG | 0.516150 | 3.4:+26162896 | None:intergenic |
| TCTTTATATTTGAAGGTAGA+GGG | 0.516316 | 3.4:+26161716 | None:intergenic |
| CTATAAACCAAACTATTGAA+AGG | 0.524444 | 3.4:-26160467 | MS.gene85095:CDS |
| AGAGGGAATGTTCCGGCCCA+TGG | 0.525112 | 3.4:+26161733 | None:intergenic |
| AAAGGAGCAGGATCTTCAAA+AGG | 0.528883 | 3.4:+26162662 | None:intergenic |
| TCAATTATGTTTGCTCCCCA+AGG | 0.529087 | 3.4:-26161271 | MS.gene85095:CDS |
| AAACATAATTGAAGCAAATG+AGG | 0.531154 | 3.4:+26161282 | None:intergenic |
| CTAGTGTCTCACTTTGGGAC+AGG | 0.531866 | 3.4:-26160386 | MS.gene85095:CDS |
| AGAGAGAGCCATCAGTCTCT+AGG | 0.533108 | 3.4:+26160517 | None:intergenic |
| TTTGAATTCAACTCAATCAA+GGG | 0.535016 | 3.4:-26163125 | MS.gene85095:CDS |
| CCTTCAGCGAAACATTATCA+AGG | 0.535892 | 3.4:-26161240 | MS.gene85095:intron |
| GTACGGAAAAGAAGATCCTT+GGG | 0.536764 | 3.4:-26161104 | MS.gene85095:CDS |
| TGCTATCCTCATTTAGTGAA+AGG | 0.537578 | 3.4:-26161835 | MS.gene85095:CDS |
| AGTGGAAATGTTTCGCCTTG+GGG | 0.540109 | 3.4:-26162614 | MS.gene85095:CDS |
| AATGTTCATTATGAGAAAGC+TGG | 0.544928 | 3.4:-26162827 | MS.gene85095:CDS |
| ACAACTACTTATCACCGCAC+TGG | 0.545633 | 3.4:+26162874 | None:intergenic |
| GTGCCGATTTGCCTCATGTA+CGG | 0.555771 | 3.4:-26161121 | MS.gene85095:CDS |
| GGGACTTCAGGTTAAAAGGA+AGG | 0.555835 | 3.4:-26161068 | MS.gene85095:CDS |
| ACAAATTCGTTACAGGTCAT+CGG | 0.557080 | 3.4:-26161919 | MS.gene85095:intron |
| TGCAGCAGCAGGATGTCTTG+TGG | 0.564810 | 3.4:+26161306 | None:intergenic |
| TCCTTTGTCTAAGGTAGAAG+GGG | 0.565381 | 3.4:-26162645 | MS.gene85095:CDS |
| GAAAGCTGGTTGTGAAAATG+TGG | 0.570001 | 3.4:-26162813 | MS.gene85095:CDS |
| TGGAGATGAAACTGAACCAT+GGG | 0.571533 | 3.4:-26162588 | MS.gene85095:CDS |
| GTAGAAGGGGTTACTTCAAG+TGG | 0.573024 | 3.4:-26162632 | MS.gene85095:CDS |
| GGAATCAAAACCTTTGAAGC+AGG | 0.573711 | 3.4:+26162926 | None:intergenic |
| AAAGAACCAACACCGAAACC+CGG | 0.578498 | 3.4:+26162767 | None:intergenic |
| TATAAAGAAACTGACAGAGT+TGG | 0.579225 | 3.4:-26161701 | MS.gene85095:CDS |
| ATTCTATTCCAAGTCCAAGA+AGG | 0.587897 | 3.4:-26160346 | MS.gene85095:CDS |
| GAATTGCCTACAATATAGAC+TGG | 0.590145 | 3.4:+26161892 | None:intergenic |
| GCGTCTATTTCTTCAAGCAG+AGG | 0.590583 | 3.4:+26160489 | None:intergenic |
| AGTTCGGTACTTCATTGAAG+AGG | 0.593978 | 3.4:-26162525 | MS.gene85095:intron |
| TTAGATTCATCCGGTAAACC+AGG | 0.594608 | 3.4:+26162905 | None:intergenic |
| AAAAGGGTCATCAACAAAGT+GGG | 0.597578 | 3.4:-26163069 | MS.gene85095:CDS |
| TCTACCTTAGACAAAGGAGC+AGG | 0.601953 | 3.4:+26162650 | None:intergenic |
| ACCCCTTCTACCTTAGACAA+AGG | 0.610253 | 3.4:+26162644 | None:intergenic |
| TACACAAGCTCAGTCGCCCA+TGG | 0.613173 | 3.4:+26162572 | None:intergenic |
| ATTCGCCAAAGTATTTCCAT+GGG | 0.625022 | 3.4:-26161749 | MS.gene85095:CDS |
| ATTGTAGGCAATTCACTAGG+AGG | 0.628400 | 3.4:-26161883 | MS.gene85095:CDS |
| ATTAGAAACCTAGAGACTGA+TGG | 0.631675 | 3.4:-26160525 | MS.gene85095:CDS |
| TTGGAGATGAAACTGAACCA+TGG | 0.632678 | 3.4:-26162589 | MS.gene85095:CDS |
| CCCCATATAGGTGTCACCCA+AGG | 0.637101 | 3.4:+26161088 | None:intergenic |
| TATGTGATTAATGAAGATGA+AGG | 0.646571 | 3.4:-26162974 | MS.gene85095:CDS |
| TATATTGTAGGCAATTCACT+AGG | 0.646604 | 3.4:-26161886 | MS.gene85095:CDS |
| ACCTCAGGGACTTCATCATG+AGG | 0.651405 | 3.4:+26161001 | None:intergenic |
| GTGTTCATAACTTGACAACA+TGG | 0.652381 | 3.4:+26163172 | None:intergenic |
| CTGAAGGATAATTCTCCTTG+GGG | 0.654826 | 3.4:+26161256 | None:intergenic |
| GTTTCATCTCCAAAACCCCA+AGG | 0.659791 | 3.4:+26162599 | None:intergenic |
| GTCCCAAAGTGAGACACTAG+AGG | 0.660707 | 3.4:+26160389 | None:intergenic |
| TGAAGGAAGAGATATTGTAG+GGG | 0.662501 | 3.4:-26162957 | MS.gene85095:CDS |
| GGTTTACCGGATGAATCTAA+CGG | 0.662912 | 3.4:-26162902 | MS.gene85095:CDS |
| CCCTCATGATGAAGTCCCTG+AGG | 0.665003 | 3.4:-26161002 | MS.gene85095:intron |
| CTATTCCAAGTCCAAGAAGG+TGG | 0.669003 | 3.4:-26160343 | MS.gene85095:CDS |
| CCTCAGGGACTTCATCATGA+GGG | 0.670617 | 3.4:+26161002 | None:intergenic |
| CATGAGGGCAGTGACCAGCA+GGG | 0.689126 | 3.4:+26161017 | None:intergenic |
| CCTTGGGTGACACCTATATG+GGG | 0.695951 | 3.4:-26161088 | MS.gene85095:CDS |
| ATCTAACGGTGAATCCAGTG+CGG | 0.751686 | 3.4:-26162888 | MS.gene85095:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTTCTTATATTAGAAAAAA+TGG | - | chr3.4:26160422-26160441 | MS.gene85095:CDS | 15.0% |
| !! | TCTAAAAAAGAAAATTCATT+TGG | - | chr3.4:26161172-26161191 | MS.gene85095:intron | 15.0% |
| !!! | TTGTCAAAAATAATTTTTGA+AGG | - | chr3.4:26161548-26161567 | MS.gene85095:intron | 15.0% |
| !! | AAAATTGAATAGATGTGATA+AGG | + | chr3.4:26162065-26162084 | None:intergenic | 20.0% |
| !! | AAATTGAATAGATGTGATAA+GGG | + | chr3.4:26162064-26162083 | None:intergenic | 20.0% |
| !! | CTAAAATACTAAATCATATC+CGG | + | chr3.4:26161898-26161917 | None:intergenic | 20.0% |
| !! | CTGAAAATAAGTTTATAAGT+TGG | - | chr3.4:26162647-26162666 | MS.gene85095:CDS | 20.0% |
| !! | GAAACAAATTAATAAGAATC+AGG | + | chr3.4:26162089-26162108 | None:intergenic | 20.0% |
| !! | TAATGGAATAGATATGATAA+GGG | + | chr3.4:26162039-26162058 | None:intergenic | 20.0% |
| !! | TATAAACCAAACTATTGAAA+GGG | - | chr3.4:26163059-26163078 | MS.gene85095:CDS | 20.0% |
| !! | TCATAATGAACATTCAATTT+AGG | + | chr3.4:26160692-26160711 | None:intergenic | 20.0% |
| !! | TTAATGGAATAGATATGATA+AGG | + | chr3.4:26162040-26162059 | None:intergenic | 20.0% |
| !! | TTATTATACAAATTCGTTAC+AGG | - | chr3.4:26161599-26161618 | MS.gene85095:intron | 20.0% |
| !!! | AAAAAAATCTAAAACCACAT+AGG | + | chr3.4:26161128-26161147 | None:intergenic | 20.0% |
| !!! | AAAATAAGTTTATAAGTTGG+AGG | - | chr3.4:26162650-26162669 | MS.gene85095:CDS | 20.0% |
| !!! | AAATGGATGTTTTTATGAAA+AGG | - | chr3.4:26160439-26160458 | MS.gene85095:CDS | 20.0% |
| !!! | AATGGATGTTTTTATGAAAA+GGG | - | chr3.4:26160440-26160459 | MS.gene85095:CDS | 20.0% |
| !!! | AATTATTTTTGACAATAGTG+CGG | + | chr3.4:26161543-26161562 | None:intergenic | 20.0% |
| !!! | ATAAATTTTTAGTGTGCAAT+AGG | + | chr3.4:26162811-26162830 | None:intergenic | 20.0% |
| !!! | CAACTTATAAACTTATTTTC+AGG | + | chr3.4:26162649-26162668 | None:intergenic | 20.0% |
| !!! | CTTATTAATTTGTTTCCTAT+AGG | - | chr3.4:26162093-26162112 | MS.gene85095:intron | 20.0% |
| !!! | GATTTTTTTGAACTTTTTCT+AGG | + | chr3.4:26163096-26163115 | None:intergenic | 20.0% |
| ! | AAAAACGTTATCCACATTTA+TGG | + | chr3.4:26162183-26162202 | None:intergenic | 25.0% |
| ! | AAACATAATTGAAGCAAATG+AGG | + | chr3.4:26162246-26162265 | None:intergenic | 25.0% |
| ! | AATGCTTCCTATACTTATAA+TGG | - | chr3.4:26161484-26161503 | MS.gene85095:intron | 25.0% |
| ! | AATGGAATAGATATGATAAG+GGG | + | chr3.4:26162038-26162057 | None:intergenic | 25.0% |
| ! | ACAGTTGAAGTTAATTAGTT+AGG | + | chr3.4:26162558-26162577 | None:intergenic | 25.0% |
| ! | CACTAAAAGACTCAAATTTA+AGG | - | chr3.4:26160505-26160524 | MS.gene85095:CDS | 25.0% |
| ! | CTATAAACCAAACTATTGAA+AGG | - | chr3.4:26163058-26163077 | MS.gene85095:CDS | 25.0% |
| ! | CTTAAATGATCTTAGAATTG+CGG | + | chr3.4:26162731-26162750 | None:intergenic | 25.0% |
| ! | GTCAGTTTCTTTATATTTGA+AGG | + | chr3.4:26161819-26161838 | None:intergenic | 25.0% |
| ! | TATACTATTTCAGCAAACAA+TGG | + | chr3.4:26161074-26161093 | None:intergenic | 25.0% |
| ! | TATGTGATTAATGAAGATGA+AGG | - | chr3.4:26160551-26160570 | MS.gene85095:CDS | 25.0% |
| ! | TCATAAAGAACTAAACAATG+AGG | + | chr3.4:26162914-26162933 | None:intergenic | 25.0% |
| ! | TCTTTATATTTGAAGGTAGA+GGG | + | chr3.4:26161812-26161831 | None:intergenic | 25.0% |
| ! | TGAGTAACCATTATAAGTAT+AGG | + | chr3.4:26161494-26161513 | None:intergenic | 25.0% |
| ! | TTCTTTATATTTGAAGGTAG+AGG | + | chr3.4:26161813-26161832 | None:intergenic | 25.0% |
| ! | TTTGAATTCAACTCAATCAA+GGG | - | chr3.4:26160400-26160419 | MS.gene85095:CDS | 25.0% |
| !! | CTCAAATTTAAGGTTAATAG+TGG | - | chr3.4:26160515-26160534 | MS.gene85095:CDS | 25.0% |
| !!! | ACCAAATGTTTTATTTTTGC+CGG | - | chr3.4:26160739-26160758 | MS.gene85095:intron | 25.0% |
| !!! | ATTAATTTGTTTCCTATAGG+TGG | - | chr3.4:26162096-26162115 | MS.gene85095:intron | 25.0% |
| !!! | GTGATAAGTAGTTGTTTTAA+GGG | - | chr3.4:26160659-26160678 | MS.gene85095:intron | 25.0% |
| !!! | TTAATTTGTTTCCTATAGGT+GGG | - | chr3.4:26162097-26162116 | MS.gene85095:intron | 25.0% |
| !!! | TTTTTTCTAACAACTTATGC+TGG | - | chr3.4:26161142-26161161 | MS.gene85095:intron | 25.0% |
| AAAGAACTAAACAATGAGGA+AGG | + | chr3.4:26162910-26162929 | None:intergenic | 30.0% | |
| AATGTTCATTATGAGAAAGC+TGG | - | chr3.4:26160698-26160717 | MS.gene85095:intron | 30.0% | |
| AGTATACTGGAAAATGTTCT+TGG | - | chr3.4:26161088-26161107 | MS.gene85095:CDS | 30.0% | |
| ATGAAGGAAGAGATATTGTA+GGG | - | chr3.4:26160567-26160586 | MS.gene85095:intron | 30.0% | |
| ATTTATGGCAAGATCAAGTT+CGG | - | chr3.4:26160984-26161003 | MS.gene85095:intron | 30.0% | |
| CCTAAAGAGCTTATTGAAAT+AGG | + | chr3.4:26161306-26161325 | None:intergenic | 30.0% | |
| CCTATTTCAATAAGCTCTTT+AGG | - | chr3.4:26161303-26161322 | MS.gene85095:CDS | 30.0% | |
| CTTCATTTCTTTCTTAGTTC+CGG | - | chr3.4:26161876-26161895 | MS.gene85095:CDS | 30.0% | |
| GTCATAAATTTCTTACTTCG+TGG | - | chr3.4:26162973-26162992 | MS.gene85095:CDS | 30.0% | |
| GTTTGAATTCAACTCAATCA+AGG | - | chr3.4:26160399-26160418 | MS.gene85095:CDS | 30.0% | |
| TAAATTTCTTACTTCGTGGA+TGG | - | chr3.4:26162977-26162996 | MS.gene85095:CDS | 30.0% | |
| TACGTGAATACACATGTTAA+TGG | - | chr3.4:26162342-26162361 | MS.gene85095:intron | 30.0% | |
| TAGATGTGATAAGGGTTTAA+TGG | + | chr3.4:26162056-26162075 | None:intergenic | 30.0% | |
| TATAAAGAAACTGACAGAGT+TGG | - | chr3.4:26161824-26161843 | MS.gene85095:CDS | 30.0% | |
| TATATTGTAGGCAATTCACT+AGG | - | chr3.4:26161639-26161658 | MS.gene85095:intron | 30.0% | |
| TATTGCTGATGTACTTAATC+AGG | - | chr3.4:26162142-26162161 | MS.gene85095:intron | 30.0% | |
| TCAAATAAGTCAATTCAGAC+AGG | + | chr3.4:26161198-26161217 | None:intergenic | 30.0% | |
| TTTAGTTGTGAACTTCTGAT+TGG | - | chr3.4:26161913-26161932 | MS.gene85095:intron | 30.0% | |
| ! | ACACATGTTAATGGTTTTTG+CGG | - | chr3.4:26162351-26162370 | MS.gene85095:intron | 30.0% |
| ! | ACCTTACAAGCTAATTTTGT+AGG | - | chr3.4:26162681-26162700 | MS.gene85095:CDS | 30.0% |
| ! | AGTACATCAGCAATACTTTT+CGG | + | chr3.4:26162137-26162156 | None:intergenic | 30.0% |
| ! | ATTTGATAATATGGAGCTTC+AGG | + | chr3.4:26162485-26162504 | None:intergenic | 30.0% |
| ! | CCTTACAAGCTAATTTTGTA+GGG | - | chr3.4:26162682-26162701 | MS.gene85095:CDS | 30.0% |
| ! | GGTAAATAACTTGCATTGTT+TGG | - | chr3.4:26161021-26161040 | MS.gene85095:CDS | 30.0% |
| ! | TGTTTGCTGAAATAGTATAC+TGG | - | chr3.4:26161075-26161094 | MS.gene85095:CDS | 30.0% |
| ! | TTGTGTATTCGGTTGATTTA+TGG | - | chr3.4:26160969-26160988 | MS.gene85095:intron | 30.0% |
| ! | TTTTGTAGGGTTGAGTTAAA+CGG | - | chr3.4:26162695-26162714 | MS.gene85095:CDS | 30.0% |
| !! | AAAATTAGCTTGTAAGGTGA+GGG | + | chr3.4:26162679-26162698 | None:intergenic | 30.0% |
| !! | AAGGTTAATAGTGGAAGTTT+TGG | - | chr3.4:26160524-26160543 | MS.gene85095:CDS | 30.0% |
| !! | GGTGATAAGTAGTTGTTTTA+AGG | - | chr3.4:26160658-26160677 | MS.gene85095:intron | 30.0% |
| !!! | CCAAATGTTTTATTTTTGCC+GGG | - | chr3.4:26160740-26160759 | MS.gene85095:intron | 30.0% |
| !!! | TAAGTAGTTGTTTTAAGGGA+TGG | - | chr3.4:26160663-26160682 | MS.gene85095:intron | 30.0% |
| AAAAGGGTCATCAACAAAGT+GGG | - | chr3.4:26160456-26160475 | MS.gene85095:CDS | 35.0% | |
| AACCCAAGTTACTTATTTGC+AGG | - | chr3.4:26162951-26162970 | MS.gene85095:CDS | 35.0% | |
| AATGATCTTAGAATTGCGGT+TGG | + | chr3.4:26162727-26162746 | None:intergenic | 35.0% | |
| ACAAATTCGTTACAGGTCAT+CGG | - | chr3.4:26161606-26161625 | MS.gene85095:intron | 35.0% | |
| ACAATGAGGAAGGAATAACA+AGG | + | chr3.4:26162900-26162919 | None:intergenic | 35.0% | |
| ATGATCTTAGAATTGCGGTT+GGG | + | chr3.4:26162726-26162745 | None:intergenic | 35.0% | |
| ATTAGAAACCTAGAGACTGA+TGG | - | chr3.4:26163000-26163019 | MS.gene85095:CDS | 35.0% | |
| ATTCTATTCCAAGTCCAAGA+AGG | - | chr3.4:26163179-26163198 | MS.gene85095:CDS | 35.0% | |
| CCCGGCAAAAATAAAACATT+TGG | + | chr3.4:26160743-26160762 | None:intergenic | 35.0% | |
| CTAACTCCCTTTCAATAGTT+TGG | + | chr3.4:26163068-26163087 | None:intergenic | 35.0% | |
| GAATTGCCTACAATATAGAC+TGG | + | chr3.4:26161636-26161655 | None:intergenic | 35.0% | |
| GACCTGCAAATAAGTAACTT+GGG | + | chr3.4:26162956-26162975 | None:intergenic | 35.0% | |
| GAGTTTATCCAAGATCCATT+TGG | - | chr3.4:26162750-26162769 | MS.gene85095:CDS | 35.0% | |
| GATGAAGGAAGAGATATTGT+AGG | - | chr3.4:26160566-26160585 | MS.gene85095:intron | 35.0% | |
| GTGTTCATAACTTGACAACA+TGG | + | chr3.4:26160356-26160375 | None:intergenic | 35.0% | |
| GTTACACCTTTCACTAAATG+AGG | + | chr3.4:26161699-26161718 | None:intergenic | 35.0% | |
| TCATTATGAGAAGCAGTTGA+TGG | - | chr3.4:26160781-26160800 | MS.gene85095:intron | 35.0% | |
| TCGCAAATGAATGACTACAT+TGG | + | chr3.4:26161957-26161976 | None:intergenic | 35.0% | |
| TGAAGGAAGAGATATTGTAG+GGG | - | chr3.4:26160568-26160587 | MS.gene85095:intron | 35.0% | |
| TGACCTGCAAATAAGTAACT+TGG | + | chr3.4:26162957-26162976 | None:intergenic | 35.0% | |
| TGCTATCCTCATTTAGTGAA+AGG | - | chr3.4:26161690-26161709 | MS.gene85095:intron | 35.0% | |
| TGGACTTGGAATAGAATTTG+AGG | + | chr3.4:26163176-26163195 | None:intergenic | 35.0% | |
| ! | ACTAATTTTCTCCCACCTAT+AGG | + | chr3.4:26162111-26162130 | None:intergenic | 35.0% |
| ! | ATTCGCCAAAGTATTTCCAT+GGG | - | chr3.4:26161776-26161795 | MS.gene85095:CDS | 35.0% |
| ! | CAAATTTGCTTGTTCCTATG+TGG | - | chr3.4:26161111-26161130 | MS.gene85095:CDS | 35.0% |
| ! | CTTAATGCAACACCTTTTTG+GGG | - | chr3.4:26161723-26161742 | MS.gene85095:CDS | 35.0% |
| ! | GCTTAATGCAACACCTTTTT+GGG | - | chr3.4:26161722-26161741 | MS.gene85095:CDS | 35.0% |
| ! | TGCTTAATGCAACACCTTTT+TGG | - | chr3.4:26161721-26161740 | MS.gene85095:CDS | 35.0% |
| ! | TTAAGTTGCGTATCCAAACA+AGG | - | chr3.4:26161390-26161409 | MS.gene85095:CDS | 35.0% |
| ! | TTAATGCAACACCTTTTTGG+GGG | - | chr3.4:26161724-26161743 | MS.gene85095:CDS | 35.0% |
| !! | AGGTCACAAAGTGTTTTTGA+AGG | - | chr3.4:26160482-26160501 | MS.gene85095:CDS | 35.0% |
| !! | CAAAATTAGCTTGTAAGGTG+AGG | + | chr3.4:26162680-26162699 | None:intergenic | 35.0% |
| !! | CCCTACAAAATTAGCTTGTA+AGG | + | chr3.4:26162685-26162704 | None:intergenic | 35.0% |
| !!! | GTTTTATTTTTGCCGGGTTT+CGG | - | chr3.4:26160746-26160765 | MS.gene85095:intron | 35.0% |
| AAAGGAGCAGGATCTTCAAA+AGG | + | chr3.4:26160866-26160885 | None:intergenic | 40.0% | |
| AAGTGGAAATGTTTCGCCTT+GGG | - | chr3.4:26160910-26160929 | MS.gene85095:intron | 40.0% | |
| AATAGGAAATGCCGGATAGT+TGG | + | chr3.4:26162794-26162813 | None:intergenic | 40.0% | |
| AGATTCAACTACCACCTTCT+TGG | + | chr3.4:26163196-26163215 | None:intergenic | 40.0% | |
| AGTTAGGAATTGCATACCTC+AGG | + | chr3.4:26162542-26162561 | None:intergenic | 40.0% | |
| AGTTCGGTACTTCATTGAAG+AGG | - | chr3.4:26161000-26161019 | MS.gene85095:intron | 40.0% | |
| ATGAGGAAGGAATAACAAGG+AGG | + | chr3.4:26162897-26162916 | None:intergenic | 40.0% | |
| ATTGTAGGCAATTCACTAGG+AGG | - | chr3.4:26161642-26161661 | MS.gene85095:intron | 40.0% | |
| CCAAATCCAGTAAAATCTCC+TGG | - | chr3.4:26161753-26161772 | MS.gene85095:CDS | 40.0% | |
| CCTTCAGCGAAACATTATCA+AGG | - | chr3.4:26162285-26162304 | MS.gene85095:intron | 40.0% | |
| CGCAGATCATTCCATAAATG+TGG | - | chr3.4:26162169-26162188 | MS.gene85095:intron | 40.0% | |
| CTGAAGGATAATTCTCCTTG+GGG | + | chr3.4:26162272-26162291 | None:intergenic | 40.0% | |
| GAAAAGGGTCATCAACAAAG+TGG | - | chr3.4:26160455-26160474 | MS.gene85095:CDS | 40.0% | |
| GAAAGCTGGTTGTGAAAATG+TGG | - | chr3.4:26160712-26160731 | MS.gene85095:intron | 40.0% | |
| GATTCACCGTTAGATTCATC+CGG | + | chr3.4:26160632-26160651 | None:intergenic | 40.0% | |
| GCTGAAGGATAATTCTCCTT+GGG | + | chr3.4:26162273-26162292 | None:intergenic | 40.0% | |
| GGTGAACCAGTCTATATTGT+AGG | - | chr3.4:26161627-26161646 | MS.gene85095:intron | 40.0% | |
| GGTTTACCGGATGAATCTAA+CGG | - | chr3.4:26160623-26160642 | MS.gene85095:intron | 40.0% | |
| GTACGGAAAAGAAGATCCTT+GGG | - | chr3.4:26162421-26162440 | MS.gene85095:intron | 40.0% | |
| GTTAGGAATTGCATACCTCA+GGG | + | chr3.4:26162541-26162560 | None:intergenic | 40.0% | |
| TAGATATGATAAGGGGATCC+TGG | + | chr3.4:26162031-26162050 | None:intergenic | 40.0% | |
| TAGTGTGCAATAGGAAATGC+CGG | + | chr3.4:26162802-26162821 | None:intergenic | 40.0% | |
| TATTATCAAATCAGCCCTGC+TGG | - | chr3.4:26162494-26162513 | MS.gene85095:intron | 40.0% | |
| TCAATTATGTTTGCTCCCCA+AGG | - | chr3.4:26162254-26162273 | MS.gene85095:intron | 40.0% | |
| TGAGGAAGGAATAACAAGGA+GGG | + | chr3.4:26162896-26162915 | None:intergenic | 40.0% | |
| TGGAGATGAAACTGAACCAT+GGG | - | chr3.4:26160937-26160956 | MS.gene85095:intron | 40.0% | |
| TGTACGGAAAAGAAGATCCT+TGG | - | chr3.4:26162420-26162439 | MS.gene85095:intron | 40.0% | |
| TTAACCTGAAGTCCCCATAT+AGG | + | chr3.4:26162452-26162471 | None:intergenic | 40.0% | |
| TTAGATTCATCCGGTAAACC+AGG | + | chr3.4:26160623-26160642 | None:intergenic | 40.0% | |
| TTGCGTATCCAAACAAGGTT+AGG | - | chr3.4:26161395-26161414 | MS.gene85095:CDS | 40.0% | |
| TTGGAGATGAAACTGAACCA+TGG | - | chr3.4:26160936-26160955 | MS.gene85095:intron | 40.0% | |
| TTTCCGTACATGAGGCAAAT+CGG | + | chr3.4:26162410-26162429 | None:intergenic | 40.0% | |
| ! | CCAGGAGATTTTACTGGATT+TGG | + | chr3.4:26161756-26161775 | None:intergenic | 40.0% |
| ! | CTCCTTTGTCTAAGGTAGAA+GGG | - | chr3.4:26160879-26160898 | MS.gene85095:intron | 40.0% |
| ! | GATCTTCTTTTCCGTACATG+AGG | + | chr3.4:26162418-26162437 | None:intergenic | 40.0% |
| ! | GATTCGCCAAAGTATTTCCA+TGG | - | chr3.4:26161775-26161794 | MS.gene85095:CDS | 40.0% |
| ! | GTCATCAACAAAGTGGGTTT+AGG | - | chr3.4:26160462-26160481 | MS.gene85095:CDS | 40.0% |
| ! | TATGGGGACTTCAGGTTAAA+AGG | - | chr3.4:26162453-26162472 | MS.gene85095:intron | 40.0% |
| ! | TCCTTTGTCTAAGGTAGAAG+GGG | - | chr3.4:26160880-26160899 | MS.gene85095:intron | 40.0% |
| ! | TTTTAGATGTCGAGCGAACA+AGG | - | chr3.4:26162382-26162401 | MS.gene85095:intron | 40.0% |
| !! | CCATTTGGCCATTTGCTATT+GGG | - | chr3.4:26162765-26162784 | MS.gene85095:CDS | 40.0% |
| !! | CCTTGATAATGTTTCGCTGA+AGG | + | chr3.4:26162288-26162307 | None:intergenic | 40.0% |
| !! | GAGAAGCAGTTGATGGATTT+AGG | - | chr3.4:26160788-26160807 | MS.gene85095:intron | 40.0% |
| !! | GCAGGGCTGATTTGATAATA+TGG | + | chr3.4:26162494-26162513 | None:intergenic | 40.0% |
| !! | GGAATCAAAACCTTTGAAGC+AGG | + | chr3.4:26160602-26160621 | None:intergenic | 40.0% |
| !! | TCCATTTGGCCATTTGCTAT+TGG | - | chr3.4:26162764-26162783 | MS.gene85095:CDS | 40.0% |
| !! | TGACAGAGTTGGTGTAAGTA+TGG | - | chr3.4:26161835-26161854 | MS.gene85095:CDS | 40.0% |
| !!! | GCTTCAAAGGTTTTGATTCC+TGG | - | chr3.4:26160602-26160621 | MS.gene85095:intron | 40.0% |
| !!! | GGTTTTGATTCCTGGTTTAC+CGG | - | chr3.4:26160610-26160629 | MS.gene85095:intron | 40.0% |
| AAAGAACCAACACCGAAACC+CGG | + | chr3.4:26160761-26160780 | None:intergenic | 45.0% | |
| AACTACCACCTTCTTGGACT+TGG | + | chr3.4:26163190-26163209 | None:intergenic | 45.0% | |
| AAGCACTTGGGAGACTGTTT+GGG | - | chr3.4:26161234-26161253 | MS.gene85095:intron | 45.0% | |
| ACAACTACTTATCACCGCAC+TGG | + | chr3.4:26160654-26160673 | None:intergenic | 45.0% | |
| ACCCCTTCTACCTTAGACAA+AGG | + | chr3.4:26160884-26160903 | None:intergenic | 45.0% | |
| AGATCCTGCTCCTTTGTCTA+AGG | - | chr3.4:26160871-26160890 | MS.gene85095:intron | 45.0% | |
| AGTGGAAATGTTTCGCCTTG+GGG | - | chr3.4:26160911-26160930 | MS.gene85095:intron | 45.0% | |
| ATATGATAAGGGGATCCTGG+AGG | + | chr3.4:26162028-26162047 | None:intergenic | 45.0% | |
| ATATGTGAAGAGCCGCACAT+TGG | - | chr3.4:26162610-26162629 | MS.gene85095:CDS | 45.0% | |
| ATCCTTGGGTGACACCTATA+TGG | - | chr3.4:26162435-26162454 | MS.gene85095:intron | 45.0% | |
| ATCTAACGGTGAATCCAGTG+CGG | - | chr3.4:26160637-26160656 | MS.gene85095:intron | 45.0% | |
| CAAGTGGAAATGTTTCGCCT+TGG | - | chr3.4:26160909-26160928 | MS.gene85095:intron | 45.0% | |
| CCCAATAGCAAATGGCCAAA+TGG | + | chr3.4:26162768-26162787 | None:intergenic | 45.0% | |
| CCTATCTCATGTCCAATGTG+CGG | + | chr3.4:26162625-26162644 | None:intergenic | 45.0% | |
| CGCACATTGGACATGAGATA+GGG | - | chr3.4:26162623-26162642 | MS.gene85095:CDS | 45.0% | |
| CGCTGAAGGATAATTCTCCT+TGG | + | chr3.4:26162274-26162293 | None:intergenic | 45.0% | |
| CTATTCCAAGTCCAAGAAGG+TGG | - | chr3.4:26163182-26163201 | MS.gene85095:CDS | 45.0% | |
| CTATTGGGTCACCAACTATC+CGG | - | chr3.4:26162780-26162799 | MS.gene85095:CDS | 45.0% | |
| GCAAATGGCCAAATGGATCT+TGG | + | chr3.4:26162761-26162780 | None:intergenic | 45.0% | |
| GGAAATACTTTGGCGAATCC+AGG | + | chr3.4:26161774-26161793 | None:intergenic | 45.0% | |
| GTAGAAGGGGTTACTTCAAG+TGG | - | chr3.4:26160893-26160912 | MS.gene85095:intron | 45.0% | |
| GTCCACTAGCATAAGCACTT+GGG | - | chr3.4:26161222-26161241 | MS.gene85095:intron | 45.0% | |
| GTTTCATCTCCAAAACCCCA+AGG | + | chr3.4:26160929-26160948 | None:intergenic | 45.0% | |
| TAAGCACTTGGGAGACTGTT+TGG | - | chr3.4:26161233-26161252 | MS.gene85095:intron | 45.0% | |
| TCCAAACAAGGTTAGGTCAG+TGG | - | chr3.4:26161402-26161421 | MS.gene85095:CDS | 45.0% | |
| TCCACTGACCTAACCTTGTT+TGG | + | chr3.4:26161406-26161425 | None:intergenic | 45.0% | |
| TCCTTGGGTGACACCTATAT+GGG | - | chr3.4:26162436-26162455 | MS.gene85095:intron | 45.0% | |
| TCTACCTTAGACAAAGGAGC+AGG | + | chr3.4:26160878-26160897 | None:intergenic | 45.0% | |
| TGAAGGTAGAGGGAATGTTC+CGG | + | chr3.4:26161802-26161821 | None:intergenic | 45.0% | |
| TGCCTCTAGTGTCTCACTTT+GGG | - | chr3.4:26163134-26163153 | MS.gene85095:CDS | 45.0% | |
| TGTCCACTAGCATAAGCACT+TGG | - | chr3.4:26161221-26161240 | MS.gene85095:intron | 45.0% | |
| TTGCCTCTAGTGTCTCACTT+TGG | - | chr3.4:26163133-26163152 | MS.gene85095:CDS | 45.0% | |
| TTTGGCAGAAACCCCCAAAA+AGG | + | chr3.4:26161738-26161757 | None:intergenic | 45.0% | |
| ! | AATGTTTCGCCTTGGGGTTT+TGG | - | chr3.4:26160917-26160936 | MS.gene85095:intron | 45.0% |
| ! | GCGAATCCAGGAGATTTTAC+TGG | + | chr3.4:26161762-26161781 | None:intergenic | 45.0% |
| ! | GCGTCTATTTCTTCAAGCAG+AGG | + | chr3.4:26163039-26163058 | None:intergenic | 45.0% |
| ! | GCTCCTTTGTCTAAGGTAGA+AGG | - | chr3.4:26160878-26160897 | MS.gene85095:intron | 45.0% |
| ! | GGGACTTCAGGTTAAAAGGA+AGG | - | chr3.4:26162457-26162476 | MS.gene85095:intron | 45.0% |
| ! | GGTTGATGTACCTGCTTCAA+AGG | - | chr3.4:26160589-26160608 | MS.gene85095:intron | 45.0% |
| !! | GTTGGTGACCCAATAGCAAA+TGG | + | chr3.4:26162776-26162795 | None:intergenic | 45.0% |
| !!! | AGGTCGTGATTTTCGAGTGT+GGG | - | chr3.4:26160808-26160827 | MS.gene85095:intron | 45.0% |
| !!! | GCGTTGGATTTTCTAGGACA+AGG | - | chr3.4:26160830-26160849 | MS.gene85095:intron | 45.0% |
| !!! | TAGGTCGTGATTTTCGAGTG+TGG | - | chr3.4:26160807-26160826 | MS.gene85095:intron | 45.0% |
| ACCTCAGGGACTTCATCATG+AGG | + | chr3.4:26162527-26162546 | None:intergenic | 50.0% | |
| ACTGCTGATAGTACACCTCC+AGG | - | chr3.4:26162010-26162029 | MS.gene85095:intron | 50.0% | |
| AGAGAGAGCCATCAGTCTCT+AGG | + | chr3.4:26163011-26163030 | None:intergenic | 50.0% | |
| CCGCACATTGGACATGAGAT+AGG | - | chr3.4:26162622-26162641 | MS.gene85095:CDS | 50.0% | |
| CCTCAGGGACTTCATCATGA+GGG | + | chr3.4:26162526-26162545 | None:intergenic | 50.0% | |
| CCTTGGGTGACACCTATATG+GGG | - | chr3.4:26162437-26162456 | MS.gene85095:intron | 50.0% | |
| CTCCCAAGTGCTTATGCTAG+TGG | + | chr3.4:26161227-26161246 | None:intergenic | 50.0% | |
| GACACCTATATGGGGACTTC+AGG | - | chr3.4:26162445-26162464 | MS.gene85095:intron | 50.0% | |
| GGAAGGAATAACAAGGAGGG+AGG | + | chr3.4:26162893-26162912 | None:intergenic | 50.0% | |
| GGCGACTGAGCTTGTGTATT+CGG | - | chr3.4:26160958-26160977 | MS.gene85095:intron | 50.0% | |
| GTCCCAAAGTGAGACACTAG+AGG | + | chr3.4:26163139-26163158 | None:intergenic | 50.0% | |
| TCCGGCCCATGGAAATACTT+TGG | + | chr3.4:26161784-26161803 | None:intergenic | 50.0% | |
| ! | GCCAAAGTATTTCCATGGGC+CGG | - | chr3.4:26161780-26161799 | MS.gene85095:CDS | 50.0% |
| !! | CTAGTGTCTCACTTTGGGAC+AGG | - | chr3.4:26163139-26163158 | MS.gene85095:CDS | 50.0% |
| !! | GTGCCGATTTGCCTCATGTA+CGG | - | chr3.4:26162404-26162423 | MS.gene85095:intron | 50.0% |
| !! | TTTTTGCCGGGTTTCGGTGT+TGG | - | chr3.4:26160752-26160771 | MS.gene85095:intron | 50.0% |
| !!! | GTGTGGGCGTTGGATTTTCT+AGG | - | chr3.4:26160824-26160843 | MS.gene85095:intron | 50.0% |
| !!! | TGATTTTCGAGTGTGGGCGT+TGG | - | chr3.4:26160814-26160833 | MS.gene85095:intron | 50.0% |
| CCCTCATGATGAAGTCCCTG+AGG | - | chr3.4:26162523-26162542 | MS.gene85095:intron | 55.0% | |
| TACACAAGCTCAGTCGCCCA+TGG | + | chr3.4:26160956-26160975 | None:intergenic | 55.0% | |
| TGCAGCAGCAGGATGTCTTG+TGG | + | chr3.4:26162222-26162241 | None:intergenic | 55.0% | |
| ! | CCCCATATAGGTGTCACCCA+AGG | + | chr3.4:26162440-26162459 | None:intergenic | 55.0% |
| AGAGGGAATGTTCCGGCCCA+TGG | + | chr3.4:26161795-26161814 | None:intergenic | 60.0% | |
| CATGAGGGCAGTGACCAGCA+GGG | + | chr3.4:26162511-26162530 | None:intergenic | 60.0% | |
| GCAAATGAGGCTGCAGCAGC+AGG | + | chr3.4:26162233-26162252 | None:intergenic | 60.0% | |
| TCATGAGGGCAGTGACCAGC+AGG | + | chr3.4:26162512-26162531 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 26160326 | 26163221 | 26160326 | ID=MS.gene85095 |
| chr3.4 | mRNA | 26160326 | 26163221 | 26160326 | ID=MS.gene85095.t1;Parent=MS.gene85095 |
| chr3.4 | exon | 26162526 | 26163221 | 26162526 | ID=MS.gene85095.t1.exon1;Parent=MS.gene85095.t1 |
| chr3.4 | CDS | 26162526 | 26163221 | 26162526 | ID=cds.MS.gene85095.t1;Parent=MS.gene85095.t1 |
| chr3.4 | exon | 26161700 | 26161926 | 26161700 | ID=MS.gene85095.t1.exon2;Parent=MS.gene85095.t1 |
| chr3.4 | CDS | 26161700 | 26161926 | 26161700 | ID=cds.MS.gene85095.t1;Parent=MS.gene85095.t1 |
| chr3.4 | exon | 26161241 | 26161432 | 26161241 | ID=MS.gene85095.t1.exon3;Parent=MS.gene85095.t1 |
| chr3.4 | CDS | 26161241 | 26161432 | 26161241 | ID=cds.MS.gene85095.t1;Parent=MS.gene85095.t1 |
| chr3.4 | exon | 26161003 | 26161159 | 26161003 | ID=MS.gene85095.t1.exon4;Parent=MS.gene85095.t1 |
| chr3.4 | CDS | 26161003 | 26161159 | 26161003 | ID=cds.MS.gene85095.t1;Parent=MS.gene85095.t1 |
| chr3.4 | exon | 26160326 | 26160574 | 26160326 | ID=MS.gene85095.t1.exon5;Parent=MS.gene85095.t1 |
| chr3.4 | CDS | 26160326 | 26160574 | 26160326 | ID=cds.MS.gene85095.t1;Parent=MS.gene85095.t1 |
| Gene Sequence |
| Protein sequence |
