AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene86113

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene86113.t1 MTR_6g014270 97.521 242 5 1 1 241 244 485 2.40e-174 488
MS.gene86113.t1 MTR_6g014150 91.736 242 19 1 1 241 242 483 1.65e-162 458
MS.gene86113.t1 MTR_6g014190 85.950 242 33 1 1 241 52 293 4.60e-156 435
MS.gene86113.t1 MTR_6g014200 88.655 238 26 1 1 237 242 479 4.44e-155 439
MS.gene86113.t1 MTR_6g014240 85.537 242 34 1 1 241 212 453 4.33e-150 426
MS.gene86113.t1 MTR_8g059425 82.645 242 41 1 1 241 243 484 1.15e-148 423
MS.gene86113.t1 MTR_6g013450 82.427 239 41 1 1 238 246 484 1.64e-147 421
MS.gene86113.t1 MTR_5g058320 81.590 239 43 1 1 238 230 468 8.35e-147 418
MS.gene86113.t1 MTR_6g011340 83.264 239 39 1 1 238 245 483 1.29e-146 418
MS.gene86113.t1 MTR_6g014187 80.992 242 45 1 1 241 245 486 1.44e-146 418
MS.gene86113.t1 MTR_6g013900 82.083 240 42 1 1 239 244 483 1.80e-146 418
MS.gene86113.t1 MTR_6g014050 81.250 240 44 1 1 239 246 485 6.87e-146 416
MS.gene86113.t1 MTR_6g014170 83.471 242 38 2 1 240 226 467 1.23e-145 415
MS.gene86113.t1 MTR_6g013920 82.845 239 40 1 1 238 244 482 1.70e-144 413
MS.gene86113.t1 MTR_6g013960 79.583 240 48 1 1 239 245 484 6.43e-143 409
MS.gene86113.t1 MTR_6g014040 80.417 240 46 1 1 239 246 485 1.75e-142 408
MS.gene86113.t1 MTR_6g014020 78.333 240 51 1 1 239 245 484 1.25e-141 405
MS.gene86113.t1 MTR_6g014290 79.253 241 48 2 1 239 242 482 3.53e-141 404
MS.gene86113.t1 MTR_3g008010 78.838 241 49 2 1 239 242 482 4.11e-141 404
MS.gene86113.t1 MTR_6g014220 80.335 239 45 2 1 237 242 480 6.64e-141 404
MS.gene86113.t1 MTR_6g014250 79.253 241 48 2 1 239 242 482 3.16e-140 402
MS.gene86113.t1 MTR_6g013990 79.832 238 47 1 1 237 243 480 1.33e-139 400
MS.gene86113.t1 MTR_6g013440 77.824 239 52 1 1 238 246 484 3.05e-139 399
MS.gene86113.t1 MTR_6g014310 78.243 239 51 1 1 238 246 484 1.07e-138 398
MS.gene86113.t1 MTR_7g011470 78.243 239 51 1 1 238 227 465 9.65e-138 395
MS.gene86113.t1 MTR_7g011470 78.243 239 51 1 1 238 231 469 1.41e-137 395
MS.gene86113.t1 MTR_0288s0020 85.507 207 29 1 33 238 258 464 5.29e-130 375
MS.gene86113.t1 MTR_8g007585 83.092 207 34 1 34 239 190 396 2.03e-128 369
MS.gene86113.t1 MTR_8g043470 88.500 200 22 1 43 241 185 384 2.69e-127 365
MS.gene86113.t1 MTR_6g014300 70.711 239 53 2 1 238 247 469 1.94e-122 356
MS.gene86113.t1 MTR_0477s0010 78.641 206 43 1 34 238 115 320 3.78e-119 342
MS.gene86113.t1 MTR_6g014186 72.269 238 27 2 1 237 242 441 8.21e-115 336
MS.gene86113.t1 MTR_6g014185 66.667 237 46 3 1 235 140 345 1.80e-104 307
MS.gene86113.t1 MTR_5g464810 58.577 239 96 2 1 237 243 480 5.60e-101 302
MS.gene86113.t1 MTR_5g064240 58.577 239 96 2 1 237 243 480 5.60e-101 302
MS.gene86113.t1 MTR_0036s0220 58.824 238 95 2 1 236 243 479 1.37e-100 301
MS.gene86113.t1 MTR_5g464760 60.173 231 89 2 8 236 252 481 7.68e-99 296
MS.gene86113.t1 MTR_6g013680 64.286 238 34 3 1 238 192 378 9.67e-98 290
MS.gene86113.t1 MTR_5g066390 81.481 162 29 1 79 239 58 219 4.12e-97 283
MS.gene86113.t1 MTR_3g479610 54.812 239 104 3 1 235 75 313 1.09e-93 278
MS.gene86113.t1 MTR_3g079480 54.812 239 104 3 1 235 251 489 1.25e-92 281
MS.gene86113.t1 MTR_6g014160 59.917 242 27 4 1 241 227 399 6.43e-91 273
MS.gene86113.t1 MTR_2g008210 56.846 241 99 4 1 236 238 478 2.19e-90 275
MS.gene86113.t1 MTR_0891s0010 51.883 239 111 3 1 235 52 290 8.41e-90 267
MS.gene86113.t1 MTR_3g479520 53.556 239 107 3 1 235 245 483 2.23e-89 272
MS.gene86113.t1 MTR_3g479490 54.008 237 105 3 3 235 238 474 4.33e-89 271
MS.gene86113.t1 MTR_4g094220 54.852 237 101 3 1 231 239 475 7.08e-89 271
MS.gene86113.t1 MTR_6g013435 54.701 234 61 4 6 238 121 310 4.62e-77 235
MS.gene86113.t1 MTR_3g479470 51.477 237 112 2 1 234 243 479 1.16e-76 239
MS.gene86113.t1 MTR_2086s0010 59.884 172 67 2 66 235 1 172 3.71e-75 226
MS.gene86113.t1 MTR_1996s0010 59.884 172 67 2 66 235 1 172 3.71e-75 226
MS.gene86113.t1 MTR_6g013890 55.963 218 38 4 1 214 94 257 4.54e-73 223
MS.gene86113.t1 MTR_6g014000 79.839 124 24 1 107 229 27 150 1.37e-69 221
MS.gene86113.t1 MTR_5g031840 43.172 227 128 1 8 234 236 461 2.38e-64 207
MS.gene86113.t1 MTR_3g069710 44.186 215 117 2 30 241 244 458 2.40e-63 204
MS.gene86113.t1 MTR_5g031860 41.921 229 129 2 9 234 242 469 2.07e-58 192
MS.gene86113.t1 MTR_5g031830 41.304 230 131 2 8 234 242 470 1.64e-56 187
MS.gene86113.t1 MTR_1g107380 36.214 243 144 5 1 236 236 474 3.55e-54 181
MS.gene86113.t1 MTR_3g069690 40.686 204 117 3 36 235 247 450 4.55e-53 177
MS.gene86113.t1 MTR_4g064987 41.546 207 110 4 10 212 223 422 1.36e-51 174
MS.gene86113.t1 MTR_4g064987 41.546 207 110 4 10 212 229 428 1.49e-51 174
MS.gene86113.t1 MTR_7g013260 39.301 229 124 5 9 231 218 437 4.75e-49 167
MS.gene86113.t1 MTR_7g013180 40.693 231 117 7 6 232 228 442 7.52e-49 166
MS.gene86113.t1 MTR_7g013240 38.261 230 127 5 9 232 217 437 8.69e-49 166
MS.gene86113.t1 MTR_5g016480 33.610 241 153 3 6 239 235 475 2.62e-48 166
MS.gene86113.t1 MTR_7g013200 37.500 232 125 5 6 232 221 437 1.96e-47 162
MS.gene86113.t1 MTR_7g013220 36.364 242 125 6 2 232 225 448 3.21e-47 162
MS.gene86113.t1 MTR_8g064870 35.983 239 139 6 10 234 235 473 3.33e-46 160
MS.gene86113.t1 MTR_1g107360 40.976 205 104 4 39 234 265 461 3.49e-46 160
MS.gene86113.t1 MTR_4g095008 33.466 251 148 6 1 239 226 469 6.10e-46 160
MS.gene86113.t1 MTR_4g094920 33.865 251 147 6 1 239 241 484 8.27e-46 159
MS.gene86113.t1 MTR_3g049970 38.537 205 117 3 39 234 265 469 5.69e-45 157
MS.gene86113.t1 MTR_1g107350 35.498 231 139 4 14 234 238 468 7.98e-45 156
MS.gene86113.t1 MTR_4g485630 38.679 212 114 5 39 234 262 473 1.27e-44 156
MS.gene86113.t1 MTR_1g107365 38.806 201 111 3 39 234 298 491 3.09e-44 155
MS.gene86113.t1 MTR_4g008630 38.426 216 114 5 38 234 247 462 7.16e-44 154
MS.gene86113.t1 MTR_6g033725 37.129 202 119 3 32 225 250 451 7.75e-44 154
MS.gene86113.t1 MTR_6g033615 36.052 233 126 5 7 230 228 446 3.17e-43 152
MS.gene86113.t1 MTR_6g033625 36.667 240 127 6 9 239 244 467 4.58e-43 151
MS.gene86113.t1 MTR_7g070610 35.135 259 140 5 4 234 228 486 5.37e-43 152
MS.gene86113.t1 MTR_7g071040 37.603 242 130 7 13 234 250 490 5.40e-43 152
MS.gene86113.t1 MTR_8g064880 38.565 223 119 6 1 209 231 449 8.63e-43 151
MS.gene86113.t1 MTR_6g033660 34.632 231 129 4 3 225 237 453 1.07e-42 150
MS.gene86113.t1 MTR_7g046490 36.564 227 114 5 9 217 231 445 1.51e-42 150
MS.gene86113.t1 MTR_7g080950 35.043 234 139 6 9 235 221 448 2.07e-42 149
MS.gene86113.t1 MTR_1g107375 35.622 233 130 7 13 234 230 453 2.37e-42 149
MS.gene86113.t1 MTR_8g009055 35.361 263 137 8 3 237 208 465 4.02e-42 149
MS.gene86113.t1 MTR_0184s0030 38.235 204 103 4 34 217 249 449 4.28e-42 149
MS.gene86113.t1 MTR_8g077590 40.323 186 96 4 43 213 259 444 5.08e-42 149
MS.gene86113.t1 MTR_6g005600 38.942 208 107 6 40 227 253 460 6.03e-42 149
MS.gene86113.t1 MTR_1g029540 36.486 222 122 5 32 234 238 459 6.86e-42 148
MS.gene86113.t1 MTR_8g083290 35.294 238 140 6 10 235 229 464 1.01e-41 148
MS.gene86113.t1 MTR_8g008990 38.249 217 109 6 42 237 255 467 1.28e-41 148
MS.gene86113.t1 MTR_8g009073 33.061 245 135 5 9 237 103 334 1.10e-40 142
MS.gene86113.t1 MTR_1g107285 36.275 204 116 3 39 234 266 463 1.90e-40 145
MS.gene86113.t1 MTR_7g070780 38.756 209 110 5 44 234 275 483 2.11e-40 145
MS.gene86113.t1 MTR_6g033675 37.245 196 109 4 41 225 262 454 2.19e-40 144
MS.gene86113.t1 MTR_8g090095 36.250 240 126 6 13 234 249 479 2.95e-40 144
MS.gene86113.t1 MTR_8g009050 35.526 228 117 5 9 217 232 448 3.22e-40 144
MS.gene86113.t1 MTR_8g012650 41.270 189 91 4 43 211 259 447 3.74e-40 144
MS.gene86113.t1 MTR_7g070860 35.714 238 122 7 13 234 240 462 3.93e-40 144
MS.gene86113.t1 MTR_8g009073 33.061 245 135 5 9 237 232 463 1.59e-39 142
MS.gene86113.t1 MTR_8g083280 37.383 214 119 4 30 235 256 462 1.77e-39 142
MS.gene86113.t1 MTR_8g009067 32.922 243 134 5 11 237 116 345 1.85e-39 139
MS.gene86113.t1 MTR_8g012635 40.741 189 92 4 43 211 259 447 1.88e-39 142
MS.gene86113.t1 MTR_1g032490 36.098 205 122 3 39 234 266 470 2.10e-39 142
MS.gene86113.t1 MTR_5g035560 37.981 208 119 6 34 235 249 452 2.67e-39 142
MS.gene86113.t1 MTR_8g008970 35.616 219 115 4 11 213 234 442 3.26e-39 144
MS.gene86113.t1 MTR_8g008970 34.450 209 116 6 9 211 571 764 1.32e-30 119
MS.gene86113.t1 MTR_1g107315 36.408 206 120 4 39 234 264 468 3.46e-39 141
MS.gene86113.t1 MTR_5g035580 37.073 205 119 5 34 232 251 451 3.92e-39 141
MS.gene86113.t1 MTR_8g012630 39.683 189 94 4 43 211 203 391 4.32e-39 140
MS.gene86113.t1 MTR_8g088560 36.715 207 120 5 35 234 255 457 5.49e-39 140
MS.gene86113.t1 MTR_0184s0040 33.186 226 134 5 25 233 254 479 6.44e-39 140
MS.gene86113.t1 MTR_0078s0190 33.186 226 134 5 25 233 254 479 6.44e-39 140
MS.gene86113.t1 MTR_7g070800 36.250 240 132 8 13 234 239 475 6.48e-39 141
MS.gene86113.t1 MTR_8g012730 38.693 199 102 4 46 224 99 297 7.55e-39 137
MS.gene86113.t1 MTR_4g031800 35.294 238 134 5 14 232 234 470 9.28e-39 140
MS.gene86113.t1 MTR_5g004940 37.561 205 108 4 35 234 188 377 1.24e-38 138
MS.gene86113.t1 MTR_8g009067 32.922 243 134 5 11 237 234 463 1.27e-38 140
MS.gene86113.t1 MTR_7g102450 34.167 240 131 6 21 239 243 476 1.32e-38 140
MS.gene86113.t1 MTR_5g072860 36.402 239 130 7 11 240 246 471 1.83e-38 139
MS.gene86113.t1 MTR_7g117170 36.735 196 106 4 40 217 262 457 1.84e-38 139
MS.gene86113.t1 MTR_1g019510 33.603 247 130 6 9 237 232 462 1.90e-38 139
MS.gene86113.t1 MTR_5g045960 35.111 225 119 6 39 239 269 490 2.59e-38 139
MS.gene86113.t1 MTR_8g012745 37.566 189 99 5 41 211 257 444 2.68e-38 139
MS.gene86113.t1 MTR_7g080940 36.620 213 115 6 9 211 226 428 2.99e-38 139
MS.gene86113.t1 MTR_7g047030 33.654 208 116 4 25 213 239 443 3.66e-38 139
MS.gene86113.t1 MTR_7g047270 33.654 208 116 4 25 213 239 443 3.66e-38 139
MS.gene86113.t1 MTR_4g108250 34.298 242 138 7 13 234 247 487 4.01e-38 139
MS.gene86113.t1 MTR_6g038240 33.990 203 124 4 43 240 263 460 4.32e-38 138
MS.gene86113.t1 MTR_7g080935 36.058 208 123 5 9 211 226 428 4.76e-38 138
MS.gene86113.t1 MTR_3g009510 36.923 195 103 4 43 217 264 458 4.78e-38 138
MS.gene86113.t1 MTR_8g006710 39.362 188 97 5 40 210 253 440 7.99e-38 137
MS.gene86113.t1 MTR_4g024020 37.387 222 114 5 42 241 276 494 8.41e-38 138
MS.gene86113.t1 MTR_8g027885 37.186 199 107 4 33 213 252 450 8.89e-38 137
MS.gene86113.t1 MTR_6g488280 33.333 219 117 5 9 210 233 439 2.56e-37 136
MS.gene86113.t1 MTR_0428s0010 33.333 219 117 5 9 210 233 439 2.56e-37 136
MS.gene86113.t1 MTR_3g084540 35.021 237 138 5 14 234 237 473 2.67e-37 136
MS.gene86113.t1 MTR_7g102490 36.744 215 112 5 44 237 278 489 2.76e-37 137
MS.gene86113.t1 MTR_3g084520 35.417 240 132 8 14 234 237 472 2.98e-37 136
MS.gene86113.t1 MTR_8g066610 39.216 204 112 4 42 234 275 477 3.69e-37 136
MS.gene86113.t1 MTR_3g084530 34.746 236 139 5 14 234 237 472 4.20e-37 135
MS.gene86113.t1 MTR_7g070660 33.610 241 136 6 13 234 244 479 4.48e-37 136
MS.gene86113.t1 MTR_1g019520 38.095 189 100 3 42 213 2 190 4.62e-37 130
MS.gene86113.t1 MTR_7g070910 36.937 222 121 6 39 241 271 492 4.65e-37 136
MS.gene86113.t1 MTR_8g027870 36.181 199 109 4 33 213 252 450 4.75e-37 135
MS.gene86113.t1 MTR_6g038300 34.673 199 121 3 43 236 263 457 4.93e-37 135
MS.gene86113.t1 MTR_7g117405 33.871 248 126 8 14 235 246 481 5.71e-37 135
MS.gene86113.t1 MTR_7g070940 34.583 240 130 7 13 234 242 472 5.94e-37 135
MS.gene86113.t1 MTR_6g038200 36.082 194 114 4 43 231 263 451 6.23e-37 135
MS.gene86113.t1 MTR_6g023665 33.333 219 117 5 9 210 240 446 7.11e-37 135
MS.gene86113.t1 MTR_7g102560 33.468 248 134 8 14 235 242 484 9.46e-37 135
MS.gene86113.t1 MTR_0078s0060 36.181 199 105 4 32 211 245 440 1.13e-36 134
MS.gene86113.t1 MTR_8g009063 32.661 248 134 6 9 237 239 472 1.42e-36 134
MS.gene86113.t1 MTR_0078s0010 33.173 208 117 4 25 213 239 443 1.57e-36 134
MS.gene86113.t1 MTR_4g128690 34.468 235 137 5 2 234 233 452 1.77e-36 134
MS.gene86113.t1 MTR_6g038230 35.233 193 115 4 44 231 264 451 1.77e-36 134
MS.gene86113.t1 MTR_7g055710 33.613 238 140 5 14 233 245 482 2.36e-36 134
MS.gene86113.t1 MTR_1g040310 35.270 241 134 7 13 234 246 483 4.80e-36 133
MS.gene86113.t1 MTR_1g062380 32.510 243 142 6 14 235 253 494 5.19e-36 133
MS.gene86113.t1 MTR_7g102550 38.426 216 113 6 40 235 271 486 6.51e-36 132
MS.gene86113.t1 MTR_7g070930 33.471 242 140 7 13 234 247 487 7.27e-36 133
MS.gene86113.t1 MTR_4g485640 36.321 212 116 5 39 231 452 663 8.75e-36 134
MS.gene86113.t1 MTR_5g019580 35.052 194 104 4 44 215 265 458 1.61e-35 132
MS.gene86113.t1 MTR_5g019580 35.052 194 104 4 44 215 289 482 1.87e-35 132
MS.gene86113.t1 MTR_7g070740 33.333 240 142 5 13 234 244 483 2.46e-35 131
MS.gene86113.t1 MTR_4g485620 37.745 204 115 4 42 234 252 454 2.52e-35 130
MS.gene86113.t1 MTR_8g044140 33.610 241 140 6 13 234 209 448 3.66e-35 130
MS.gene86113.t1 MTR_7g102460 34.538 249 131 7 14 237 246 487 4.23e-35 130
MS.gene86113.t1 MTR_8g006730 36.170 188 103 4 40 210 254 441 5.81e-35 130
MS.gene86113.t1 MTR_6g038220 35.052 194 116 4 43 231 262 450 9.51e-35 129
MS.gene86113.t1 MTR_5g045970 31.276 243 144 5 14 235 253 493 1.03e-34 129
MS.gene86113.t1 MTR_2g035040 33.074 257 147 8 6 239 137 391 1.55e-34 127
MS.gene86113.t1 MTR_5g075440 33.871 248 136 8 1 235 224 456 1.73e-34 128
MS.gene86113.t1 MTR_7g070810 31.405 242 138 6 13 234 242 475 2.11e-34 129
MS.gene86113.t1 MTR_8g006260 35.385 195 107 5 35 212 254 446 2.29e-34 128
MS.gene86113.t1 MTR_5g072810 32.520 246 139 6 1 234 223 453 2.31e-34 128
MS.gene86113.t1 MTR_7g012120 34.545 220 121 6 38 234 264 483 2.60e-34 128
MS.gene86113.t1 MTR_5g067170 35.780 218 117 6 40 234 262 479 2.78e-34 128
MS.gene86113.t1 MTR_4g117950 35.648 216 113 7 42 234 250 462 4.71e-34 127
MS.gene86113.t1 MTR_5g087620 31.405 242 144 8 14 235 255 494 6.96e-34 127
MS.gene86113.t1 MTR_4g117890 34.419 215 117 5 42 232 258 472 7.22e-34 127
MS.gene86113.t1 MTR_5g098960 31.897 232 136 5 3 220 212 435 7.78e-34 127
MS.gene86113.t1 MTR_5g098930 31.102 254 139 7 7 235 226 468 1.41e-33 126
MS.gene86113.t1 MTR_4g128720 33.191 235 140 5 2 234 236 455 2.25e-33 125
MS.gene86113.t1 MTR_5g070090 32.911 237 134 8 9 234 239 461 2.35e-33 125
MS.gene86113.t1 MTR_5g040030 31.984 247 148 6 13 240 248 493 2.37e-33 126
MS.gene86113.t1 MTR_2g034990 35.648 216 116 6 42 234 266 481 2.65e-33 125
MS.gene86113.t1 MTR_7g039550 31.707 246 151 5 6 234 16 261 3.27e-33 121
MS.gene86113.t1 MTR_7g071050 35.821 201 112 4 39 222 226 426 3.86e-33 124
MS.gene86113.t1 MTR_5g090670 30.769 247 139 6 14 235 238 477 6.46e-33 124
MS.gene86113.t1 MTR_2g035020 35.185 216 117 6 42 234 266 481 6.93e-33 124
MS.gene86113.t1 MTR_7g080900 33.333 198 121 6 44 235 264 456 8.86e-33 124
MS.gene86113.t1 MTR_4g118000 34.016 244 133 7 14 234 228 466 1.71e-32 123
MS.gene86113.t1 MTR_8g006270 29.302 215 133 3 38 233 248 462 2.56e-32 122
MS.gene86113.t1 MTR_5g090700 30.769 247 137 6 14 235 240 477 3.62e-32 122
MS.gene86113.t1 MTR_5g072840 31.984 247 141 6 1 235 218 449 5.90e-32 121
MS.gene86113.t1 MTR_0536s0020 32.735 223 126 5 42 240 263 485 1.16e-31 121
MS.gene86113.t1 MTR_8g465670 31.579 228 120 6 11 218 235 446 1.60e-31 120
MS.gene86113.t1 MTR_5g016660 33.173 208 122 4 44 234 276 483 1.69e-31 120
MS.gene86113.t1 MTR_5g072830 30.894 246 143 6 1 234 218 448 1.77e-31 120
MS.gene86113.t1 MTR_5g090610 29.675 246 139 6 14 234 224 460 1.98e-31 120
MS.gene86113.t1 MTR_6g035295 31.837 245 149 6 13 240 247 490 2.44e-31 120
MS.gene86113.t1 MTR_8g032950 34.101 217 119 5 42 234 264 480 2.68e-31 120
MS.gene86113.t1 MTR_4g117980 34.259 216 119 6 42 234 266 481 2.94e-31 120
MS.gene86113.t1 MTR_7g067330 39.655 174 94 5 43 212 240 406 3.53e-31 119
MS.gene86113.t1 MTR_3g031400 30.131 229 142 4 16 235 231 450 3.79e-31 119
MS.gene86113.t1 MTR_5g070040 34.468 235 134 8 9 232 239 464 7.02e-31 119
MS.gene86113.t1 MTR_4g117960 32.000 250 144 7 14 239 238 485 7.72e-31 119
MS.gene86113.t1 MTR_8g074550 29.545 264 132 9 11 233 240 490 8.86e-31 119
MS.gene86113.t1 MTR_5g090630 31.193 218 123 5 43 235 251 466 1.11e-30 118
MS.gene86113.t1 MTR_3g009490 35.714 168 88 4 70 217 3 170 1.18e-30 112
MS.gene86113.t1 MTR_5g072820 32.114 246 140 8 1 234 218 448 1.21e-30 118
MS.gene86113.t1 MTR_7g470610 34.104 173 111 2 13 182 101 273 1.52e-30 115
MS.gene86113.t1 MTR_7g070583 34.104 173 111 2 13 182 101 273 1.52e-30 115
MS.gene86113.t1 MTR_5g090660 29.134 254 142 6 9 235 231 473 1.59e-30 119
MS.gene86113.t1 MTR_0475s0030 75.385 65 16 0 128 192 11 75 2.63e-30 108
MS.gene86113.t1 MTR_5g090580 29.804 255 141 8 6 235 234 475 2.70e-30 117
MS.gene86113.t1 MTR_2g059240 33.503 197 119 5 46 236 280 470 6.86e-30 116
MS.gene86113.t1 MTR_5g039900 29.412 238 152 4 13 234 246 483 9.05e-30 116
MS.gene86113.t1 MTR_8g006220 30.508 236 120 7 11 218 234 453 1.07e-29 115
MS.gene86113.t1 MTR_4g082820 34.703 219 119 7 9 213 233 441 1.09e-29 115
MS.gene86113.t1 MTR_7g067120 39.306 173 94 5 44 212 241 406 1.49e-29 115
MS.gene86113.t1 MTR_7g102520 32.735 223 131 5 32 235 267 489 1.62e-29 115
MS.gene86113.t1 MTR_6g035185 30.876 217 126 5 42 234 266 482 2.10e-29 115
MS.gene86113.t1 MTR_8g071070 32.218 239 136 9 11 238 247 470 3.50e-29 114
MS.gene86113.t1 MTR_4g082810 36.145 166 91 3 9 168 239 395 3.50e-29 113
MS.gene86113.t1 MTR_5g029800 33.028 218 123 6 40 234 260 477 4.87e-29 114
MS.gene86113.t1 MTR_5g066410 34.483 203 124 4 16 209 213 415 8.73e-29 113
MS.gene86113.t1 MTR_7g070870 32.018 228 131 7 13 234 249 458 1.40e-28 112
MS.gene86113.t1 MTR_8g009840 35.500 200 102 7 59 237 331 524 1.52e-28 113
MS.gene86113.t1 MTR_5g090620 28.767 219 128 4 43 235 260 476 1.57e-28 112
MS.gene86113.t1 MTR_8g007565 34.171 199 126 3 16 209 241 439 1.83e-28 112
MS.gene86113.t1 MTR_4g485590 38.824 170 92 4 14 178 219 381 2.12e-28 111
MS.gene86113.t1 MTR_5g090600 28.395 243 143 7 6 235 230 454 2.21e-28 112
MS.gene86113.t1 MTR_2g098430 32.870 216 118 9 13 211 244 449 3.15e-28 112
MS.gene86113.t1 MTR_2g008226 38.150 173 98 5 46 212 278 447 3.91e-28 111
MS.gene86113.t1 MTR_8g007650 34.171 199 126 3 16 209 241 439 4.60e-28 111
MS.gene86113.t1 MTR_0536s0010 32.719 217 124 6 42 238 264 478 1.30e-27 110
MS.gene86113.t1 MTR_3g031450 30.348 201 122 4 44 235 261 452 1.43e-27 110
MS.gene86113.t1 MTR_1g107325 37.255 153 88 3 89 234 201 352 3.28e-27 107
MS.gene86113.t1 MTR_5g027210 30.275 218 123 6 11 201 237 452 7.37e-27 108
MS.gene86113.t1 MTR_6g035265 31.336 217 125 6 42 234 257 473 1.29e-26 107
MS.gene86113.t1 MTR_2g040530 31.776 214 117 5 43 234 258 464 1.38e-26 107
MS.gene86113.t1 MTR_2g046750 31.731 208 123 4 44 234 260 465 1.61e-26 107
MS.gene86113.t1 MTR_2g046820 31.100 209 125 5 43 234 256 462 7.51e-26 105
MS.gene86113.t1 MTR_0009s0240 30.660 212 126 9 38 234 253 458 2.67e-25 103
MS.gene86113.t1 MTR_7g070995 38.298 141 71 4 110 234 4 144 2.69e-25 97.8
MS.gene86113.t1 MTR_8g466240 33.846 195 121 6 46 234 261 453 4.68e-25 102
MS.gene86113.t1 MTR_3g435310 33.714 175 107 5 42 210 224 395 5.12e-25 102
MS.gene86113.t1 MTR_7g070760 31.325 166 91 1 13 178 59 201 5.95e-24 95.5
MS.gene86113.t1 MTR_6g042310 33.523 176 108 5 41 210 267 439 1.26e-23 99.0
MS.gene86113.t1 MTR_4g123553 34.682 173 100 6 46 210 269 436 2.45e-23 98.2
MS.gene86113.t1 MTR_5g072850 39.189 148 80 4 44 191 210 347 4.50e-23 96.7
MS.gene86113.t1 MTR_8g068340 33.714 175 107 4 45 211 271 444 7.85e-23 96.7
MS.gene86113.t1 MTR_8g068360 30.899 178 114 4 42 211 267 443 1.25e-22 95.9
MS.gene86113.t1 MTR_7g080960 32.468 154 71 1 42 195 323 443 1.81e-22 95.5
MS.gene86113.t1 MTR_8g068330 30.288 208 131 6 17 211 234 440 2.61e-22 95.1
MS.gene86113.t1 MTR_2g046620 31.818 176 111 5 41 210 265 437 1.59e-21 92.8
MS.gene86113.t1 MTR_2g008225 32.402 179 112 5 41 213 269 444 1.71e-21 92.8
MS.gene86113.t1 MTR_6g078320 30.392 204 124 5 44 233 279 478 2.72e-21 92.4
MS.gene86113.t1 MTR_4g077960 31.285 179 114 5 41 213 241 416 3.75e-21 91.7
MS.gene86113.t1 MTR_0536s0030 36.029 136 72 3 114 234 216 351 1.92e-20 89.0
MS.gene86113.t1 MTR_6g036650 31.429 175 111 5 42 210 275 446 2.13e-20 89.7
MS.gene86113.t1 MTR_8g056740 35.507 138 86 2 42 178 166 301 5.48e-20 88.2
MS.gene86113.t1 MTR_2g008220 31.461 178 113 5 41 212 268 442 4.17e-19 85.9
MS.gene86113.t1 MTR_5g090690 26.754 228 133 6 14 227 166 373 9.48e-19 84.3
MS.gene86113.t1 MTR_1g090270 28.962 183 117 6 40 209 257 439 1.28e-18 84.7
MS.gene86113.t1 MTR_4g079250 27.404 208 143 4 40 239 255 462 3.58e-18 83.2
MS.gene86113.t1 MTR_2g014900 27.011 174 118 4 40 204 252 425 1.08e-16 79.0
MS.gene86113.t1 MTR_4g059370 26.882 186 123 5 46 218 190 375 1.64e-16 78.2
MS.gene86113.t1 MTR_4g079270 29.143 175 116 4 46 212 261 435 2.51e-16 77.8
MS.gene86113.t1 MTR_6g015160 54.717 53 23 1 130 181 30 82 1.76e-14 67.4
MS.gene86113.t1 MTR_8g028755 28.571 168 87 5 40 206 97 232 7.72e-13 66.2
MS.gene86113.t1 MTR_1g090280 27.044 159 103 5 64 209 131 289 1.23e-12 66.6
MS.gene86113.t1 MTR_2g083490 31.361 169 105 5 40 203 253 415 1.67e-12 66.6
MS.gene86113.t1 MTR_2g083480 31.126 151 96 5 40 186 253 399 2.14e-12 66.2
MS.gene86113.t1 MTR_2g083430 28.261 184 120 6 40 212 253 435 8.66e-12 64.7
MS.gene86113.t1 MTR_2g083380 30.263 152 96 5 40 186 270 416 3.40e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene86113.t1 AT1G22380 53.138 239 108 3 4 238 246 484 1.79e-91 278
MS.gene86113.t1 AT1G22400 51.440 243 114 3 1 239 244 486 9.92e-91 276
MS.gene86113.t1 AT1G22340 53.975 239 105 4 4 237 246 484 1.63e-90 275
MS.gene86113.t1 AT1G22360 53.975 239 106 3 4 238 243 481 5.33e-90 274
MS.gene86113.t1 AT1G22370 54.812 239 104 3 4 238 71 309 3.47e-88 263
MS.gene86113.t1 AT1G78270 51.899 237 109 3 4 235 245 481 2.38e-86 265
MS.gene86113.t1 AT1G22370 54.812 239 104 3 4 238 241 479 6.72e-86 263
MS.gene86113.t1 AT1G22360 50.628 239 102 4 4 238 243 469 8.54e-81 250
MS.gene86113.t1 AT5G59590 44.550 211 114 2 25 232 237 447 5.59e-63 203
MS.gene86113.t1 AT5G59580 42.723 213 119 2 25 234 235 447 4.42e-60 196
MS.gene86113.t1 AT3G46680 42.478 226 116 4 11 232 232 447 1.39e-59 194
MS.gene86113.t1 AT3G46670 44.550 211 114 2 25 232 236 446 1.06e-58 192
MS.gene86113.t1 AT3G46660 42.180 211 119 2 25 232 243 453 9.65e-58 190
MS.gene86113.t1 AT5G05880 38.326 227 129 3 11 234 230 448 3.79e-57 188
MS.gene86113.t1 AT5G38010 41.778 225 119 4 11 232 236 451 4.60e-57 188
MS.gene86113.t1 AT3G46690 44.175 206 112 2 30 232 242 447 6.19e-57 187
MS.gene86113.t1 AT3G46700 41.509 212 119 3 28 234 233 444 1.07e-56 187
MS.gene86113.t1 AT5G38040 39.111 225 125 4 11 232 232 447 2.95e-56 186
MS.gene86113.t1 AT3G46720 42.584 209 114 2 25 232 235 438 2.20e-55 183
MS.gene86113.t1 AT5G05900 38.222 225 125 3 11 234 236 447 4.79e-55 182
MS.gene86113.t1 AT3G11340 42.000 200 113 2 39 235 246 445 5.21e-55 182
MS.gene86113.t1 AT5G05860 42.157 204 115 2 36 236 246 449 2.21e-54 181
MS.gene86113.t1 AT3G46650 40.952 210 122 2 19 226 214 423 6.38e-54 179
MS.gene86113.t1 AT3G55700 45.050 202 103 5 38 235 254 451 4.11e-53 178
MS.gene86113.t1 AT5G05870 41.463 205 117 2 33 234 250 454 4.77e-51 172
MS.gene86113.t1 AT5G05890 36.564 227 133 3 11 234 234 452 9.91e-51 171
MS.gene86113.t1 AT1G05680 43.500 200 100 4 41 235 258 449 1.19e-49 169
MS.gene86113.t1 AT3G55710 44.103 195 104 4 45 235 262 455 1.86e-49 168
MS.gene86113.t1 AT1G05675 42.000 200 103 4 41 235 258 449 2.44e-47 162
MS.gene86113.t1 AT2G26480 37.198 207 126 3 35 237 242 448 2.80e-47 162
MS.gene86113.t1 AT2G28080 39.301 229 127 5 13 237 254 474 4.62e-47 162
MS.gene86113.t1 AT2G31750 39.801 201 110 4 42 235 259 455 6.79e-47 161
MS.gene86113.t1 AT2G31750 39.801 201 110 4 42 235 259 455 1.03e-46 162
MS.gene86113.t1 AT4G01070 39.189 222 108 4 9 213 234 445 9.57e-46 159
MS.gene86113.t1 AT2G36970 37.555 229 128 6 11 234 252 470 5.35e-45 157
MS.gene86113.t1 AT3G50740 36.145 249 118 7 11 233 239 472 9.52e-45 156
MS.gene86113.t1 AT4G15480 35.246 244 143 5 1 234 240 478 2.01e-44 155
MS.gene86113.t1 AT5G26310 36.866 217 114 5 40 233 250 466 1.55e-43 153
MS.gene86113.t1 AT2G15480 38.793 232 129 5 14 234 251 480 1.96e-43 153
MS.gene86113.t1 AT5G66690 34.553 246 125 6 11 233 234 466 3.21e-43 152
MS.gene86113.t1 AT2G23250 36.287 237 135 6 6 234 207 435 8.78e-43 150
MS.gene86113.t1 AT2G15490 38.793 232 129 5 14 234 248 477 1.12e-42 150
MS.gene86113.t1 AT2G23260 35.897 234 139 5 11 236 225 455 3.36e-42 149
MS.gene86113.t1 AT2G15480 37.603 242 128 6 14 234 251 490 3.61e-42 150
MS.gene86113.t1 AT1G01420 37.751 249 118 8 9 237 234 465 5.32e-42 149
MS.gene86113.t1 AT1G01420 37.751 249 118 8 9 237 237 468 5.80e-42 149
MS.gene86113.t1 AT4G15490 32.794 247 151 5 1 238 230 470 1.16e-41 148
MS.gene86113.t1 AT2G15490 38.298 235 129 6 14 234 248 480 1.16e-41 148
MS.gene86113.t1 AT5G17040 34.188 234 141 4 4 235 116 338 1.91e-41 144
MS.gene86113.t1 AT4G15500 32.906 234 142 5 10 235 237 463 2.84e-41 147
MS.gene86113.t1 AT5G17050 37.553 237 129 6 2 232 235 458 6.77e-41 145
MS.gene86113.t1 AT2G31790 34.498 229 139 4 10 231 229 453 7.01e-41 145
MS.gene86113.t1 AT3G02100 40.260 231 113 8 9 232 245 457 7.28e-41 145
MS.gene86113.t1 AT5G17040 35.217 230 136 5 8 235 222 440 8.88e-41 145
MS.gene86113.t1 AT4G36770 38.342 193 101 3 43 217 253 445 2.74e-40 144
MS.gene86113.t1 AT2G16890 39.024 205 105 7 44 234 269 467 3.53e-40 144
MS.gene86113.t1 AT5G17030 33.898 236 143 5 2 235 232 456 5.16e-40 143
MS.gene86113.t1 AT3G21560 33.333 231 141 4 13 234 246 472 1.27e-39 143
MS.gene86113.t1 AT3G16520 37.719 228 118 7 8 221 234 451 3.45e-39 141
MS.gene86113.t1 AT3G16520 38.073 218 113 7 8 215 234 439 3.66e-39 140
MS.gene86113.t1 AT4G34131 32.906 234 137 4 14 233 251 478 4.98e-39 141
MS.gene86113.t1 AT3G16520 38.073 218 113 7 8 215 234 439 5.62e-39 140
MS.gene86113.t1 AT3G53160 40.639 219 110 6 42 240 271 489 7.34e-39 140
MS.gene86113.t1 AT2G43820 36.765 204 116 5 38 234 249 446 1.28e-38 139
MS.gene86113.t1 AT2G43840 35.266 207 121 5 38 237 249 449 1.36e-38 139
MS.gene86113.t1 AT2G43840 35.266 207 121 5 38 237 249 449 1.39e-38 139
MS.gene86113.t1 AT2G36800 38.426 216 114 5 39 235 273 488 5.24e-38 139
MS.gene86113.t1 AT5G14860 39.901 203 107 7 44 234 276 475 9.06e-38 138
MS.gene86113.t1 AT2G36790 40.278 216 110 5 39 235 273 488 1.59e-37 137
MS.gene86113.t1 AT2G36780 34.298 242 138 6 13 235 250 489 6.40e-37 135
MS.gene86113.t1 AT4G34138 34.728 239 139 6 14 240 251 484 6.50e-37 135
MS.gene86113.t1 AT1G30530 32.579 221 143 3 17 235 235 451 7.99e-37 135
MS.gene86113.t1 AT1G05560 32.114 246 142 7 6 234 214 451 1.48e-36 134
MS.gene86113.t1 AT1G05560 32.114 246 142 7 6 234 264 501 1.61e-36 135
MS.gene86113.t1 AT3G22250 35.096 208 119 6 9 208 242 441 4.93e-36 132
MS.gene86113.t1 AT2G36770 33.884 242 139 6 13 235 250 489 5.70e-36 133
MS.gene86113.t1 AT1G01390 36.444 225 110 7 9 213 234 445 6.47e-36 132
MS.gene86113.t1 AT2G29730 30.672 238 144 7 8 235 237 463 7.11e-36 132
MS.gene86113.t1 AT1G01390 36.145 249 123 9 9 237 251 483 8.23e-36 132
MS.gene86113.t1 AT3G53150 40.789 152 86 2 35 182 280 431 1.34e-35 132
MS.gene86113.t1 AT2G18560 37.745 204 105 7 44 227 168 369 1.51e-35 130
MS.gene86113.t1 AT2G29710 30.290 241 142 7 8 235 236 463 2.31e-35 131
MS.gene86113.t1 AT2G36760 32.645 242 142 6 13 235 250 489 2.55e-35 131
MS.gene86113.t1 AT1G10400 38.000 200 107 7 44 233 269 461 3.74e-35 130
MS.gene86113.t1 AT2G36750 35.185 216 121 5 39 235 269 484 1.87e-34 129
MS.gene86113.t1 AT4G15550 32.589 224 134 5 25 233 251 472 3.25e-34 128
MS.gene86113.t1 AT1G24100 35.193 233 129 7 14 235 234 455 6.55e-34 127
MS.gene86113.t1 AT1G05530 31.837 245 149 6 6 235 214 455 1.19e-33 126
MS.gene86113.t1 AT1G73880 37.129 202 116 6 42 235 269 467 1.99e-33 125
MS.gene86113.t1 AT2G30140 33.047 233 130 6 11 234 235 450 3.46e-33 125
MS.gene86113.t1 AT2G30140 33.047 233 130 6 11 234 236 451 3.73e-33 125
MS.gene86113.t1 AT2G30150 33.036 224 133 5 20 234 221 436 4.47e-33 124
MS.gene86113.t1 AT2G30150 33.036 224 133 5 20 234 237 452 5.61e-33 124
MS.gene86113.t1 AT4G14090 34.649 228 130 8 16 233 236 454 5.85e-33 124
MS.gene86113.t1 AT5G37950 42.361 144 74 2 11 153 202 337 6.31e-33 122
MS.gene86113.t1 AT5G37950 42.361 144 74 2 11 153 208 343 7.72e-33 122
MS.gene86113.t1 AT1G07260 29.630 243 151 5 4 235 239 472 9.84e-33 124
MS.gene86113.t1 AT2G29740 33.475 236 135 6 8 232 248 472 1.49e-32 123
MS.gene86113.t1 AT2G16890 41.549 142 72 4 44 180 269 404 2.23e-32 122
MS.gene86113.t1 AT2G18570 35.784 204 109 7 44 227 258 459 2.76e-32 122
MS.gene86113.t1 AT4G34135 33.846 195 115 4 14 197 252 443 5.08e-32 122
MS.gene86113.t1 AT3G21750 30.078 256 141 5 5 235 227 469 7.94e-32 121
MS.gene86113.t1 AT1G07250 32.083 240 141 5 8 235 244 473 5.20e-31 119
MS.gene86113.t1 AT5G03490 32.035 231 134 6 10 233 247 461 5.32e-31 119
MS.gene86113.t1 AT2G29750 29.412 238 147 5 8 235 248 474 6.48e-31 119
MS.gene86113.t1 AT4G15280 30.469 256 147 4 1 235 229 474 2.03e-30 117
MS.gene86113.t1 AT4G15280 30.469 256 147 4 1 235 261 506 2.51e-30 117
MS.gene86113.t1 AT4G15260 33.486 218 119 6 42 235 140 355 4.39e-30 115
MS.gene86113.t1 AT3G21790 32.296 257 134 6 5 234 235 478 1.20e-29 115
MS.gene86113.t1 AT1G07240 31.148 244 142 7 8 235 243 476 7.13e-29 113
MS.gene86113.t1 AT3G21760 28.346 254 149 5 4 234 237 480 2.83e-28 112
MS.gene86113.t1 AT5G12890 34.426 244 129 11 16 238 252 485 4.39e-28 111
MS.gene86113.t1 AT3G21780 31.818 220 125 4 38 234 251 468 1.33e-27 110
MS.gene86113.t1 AT5G65550 35.294 170 99 5 45 207 269 434 2.09e-27 109
MS.gene86113.t1 AT3G21800 29.921 254 144 6 5 234 232 475 3.04e-27 108
MS.gene86113.t1 AT1G51210 30.516 213 114 6 10 210 242 432 4.80e-26 105
MS.gene86113.t1 AT5G49690 33.140 172 102 4 46 211 267 431 1.10e-25 104
MS.gene86113.t1 AT2G22590 35.393 178 98 5 46 211 274 446 3.60e-21 92.0
MS.gene86113.t1 AT1G06000 33.333 210 124 7 41 236 228 435 5.30e-21 91.3
MS.gene86113.t1 AT4G27570 30.935 139 90 3 44 178 248 384 1.27e-17 81.6
MS.gene86113.t1 AT4G09500 28.249 177 115 5 46 212 244 418 2.03e-17 81.3
MS.gene86113.t1 AT4G09500 28.249 177 115 5 46 212 219 393 2.03e-17 80.9
MS.gene86113.t1 AT3G29630 30.732 205 118 8 45 234 219 414 2.31e-17 80.9
MS.gene86113.t1 AT3G29630 33.333 147 88 4 45 187 245 385 2.55e-17 80.9
MS.gene86113.t1 AT4G27560 30.216 139 91 3 44 178 248 384 6.15e-17 79.7
MS.gene86113.t1 AT1G64910 28.652 178 115 5 46 213 244 419 7.23e-17 79.3
MS.gene86113.t1 AT5G53990 31.034 145 90 4 46 186 244 382 2.91e-16 77.8
MS.gene86113.t1 AT2G22930 27.528 178 117 5 46 213 244 419 3.32e-16 77.4
MS.gene86113.t1 AT5G54010 28.313 166 109 4 46 207 250 409 2.07e-15 75.1
MS.gene86113.t1 AT1G50580 25.957 235 153 8 17 241 222 445 1.16e-14 73.2
MS.gene86113.t1 AT5G54060 33.582 134 82 4 40 168 262 393 1.65e-12 66.6
MS.gene86113.t1 AT1G64920 27.647 170 109 5 46 207 244 407 6.08e-12 65.1
MS.gene86113.t1 AT4G01070 36.458 96 51 1 9 104 234 319 7.52e-11 61.6

Find 60 sgRNAs with CRISPR-Local

Find 70 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGCCAATAGCACAAATATT+AGG 0.156458 6.3:-8961049 None:intergenic
TTCCCTAATATTTGTGCTAT+TGG 0.211057 6.3:+8961046 MS.gene86113:CDS
AACAACAGACCTTGGTTCTT+TGG 0.216323 6.3:-8961170 None:intergenic
CAAGTTTAAGTACCAATCTT+TGG 0.243505 6.3:+8961113 MS.gene86113:CDS
TCTGTTGTTTACGTGAATTT+TGG 0.266193 6.3:+8961184 MS.gene86113:CDS
AGGCCTAATGATCCACAAAA+AGG 0.291358 6.3:-8961275 None:intergenic
TGACTTAAAAGTGAAGATAA+AGG 0.310770 6.3:-8961070 None:intergenic
CATATATATCTGCAGTTTGC+TGG 0.315116 6.3:-8961508 None:intergenic
GGTGTCTTCTTTCCAAAGAT+TGG 0.369222 6.3:-8961125 None:intergenic
GAGAGATGAGGTAGAGAAGC+TGG 0.376472 6.3:+8961573 MS.gene86113:CDS
ATTAGAGTTTGCTTGGGGTT+TGG 0.381595 6.3:+8961237 MS.gene86113:CDS
GGCCAATAGCACAAATATTA+GGG 0.384505 6.3:-8961048 None:intergenic
AAAACTATTAGAGTTTGCTT+GGG 0.398810 6.3:+8961231 MS.gene86113:CDS
GACTTAAAAGTGAAGATAAA+GGG 0.399902 6.3:-8961069 None:intergenic
ATATGCAATGAATGGGAGAT+TGG 0.411905 6.3:+8961526 MS.gene86113:CDS
GTGAATCAAATTTCAGATAG+AGG 0.417787 6.3:+8961340 MS.gene86113:CDS
GTATTAAACCACCCTTCAAT+TGG 0.418422 6.3:+8961394 MS.gene86113:CDS
GCGGAGGAGGACACGAGACC+TGG 0.431668 6.3:+8961661 MS.gene86113:CDS
GCAGATATATATGCAATGAA+TGG 0.440611 6.3:+8961518 MS.gene86113:CDS
ATTAGGCCTGATCTTGTCAT+TGG 0.449070 6.3:+8961289 MS.gene86113:CDS
AAGACACCAAGTGTCTTGAT+TGG 0.451067 6.3:+8961140 MS.gene86113:CDS
TGAGTTGAAGCAGGCGGAGG+AGG 0.470386 6.3:+8961648 MS.gene86113:CDS
GAATTGATGGTGGGAGAGAA+AGG 0.475632 6.3:+8961601 MS.gene86113:CDS
CAGATATATATGCAATGAAT+GGG 0.491782 6.3:+8961519 MS.gene86113:CDS
GAGTCACCAATGACAAGATC+AGG 0.494491 6.3:-8961295 None:intergenic
AGGAAAGATGATGAGGCAAA+AGG 0.503089 6.3:+8961621 MS.gene86113:CDS
TTAAACCACCCTTCAATTGG+TGG 0.505097 6.3:+8961397 MS.gene86113:CDS
GAGGACACCAGCTTGCGATT+AGG 0.511382 6.3:-8961363 None:intergenic
TTCATATATGAACAACCTCC+AGG 0.514192 6.3:-8961679 None:intergenic
GTCAAGAATCCACCAATTGA+AGG 0.516692 6.3:-8961406 None:intergenic
GAAGCTGGTGAATGAATTGA+TGG 0.522905 6.3:+8961588 MS.gene86113:CDS
TATGCAATGAATGGGAGATT+GGG 0.524820 6.3:+8961527 MS.gene86113:CDS
TTCACGTAAACAACAGACCT+TGG 0.526721 6.3:-8961178 None:intergenic
TGGTTTAATACTTGCTCTTG+AGG 0.529180 6.3:-8961382 None:intergenic
ACCACTGAAAGTATCTGTGC+TGG 0.538316 6.3:+8961448 MS.gene86113:CDS
AATTGAGTTGAAGCAGGCGG+AGG 0.540575 6.3:+8961645 MS.gene86113:CDS
AAAGGCAATTGAGTTGAAGC+AGG 0.551208 6.3:+8961639 MS.gene86113:CDS
CTGGAGTGCCGATGTTGTGT+TGG 0.557220 6.3:+8961467 MS.gene86113:CDS
AGGTTGTTCATATATGAACT+TGG 0.559760 6.3:+8961684 MS.gene86113:CDS
TTCAAGCCAATCAAGACACT+TGG 0.571638 6.3:-8961146 None:intergenic
GATTCTTGACTCATTGTGGA+TGG 0.573721 6.3:+8961419 MS.gene86113:CDS
TACCTCATCTCTCTTCACAT+TGG 0.575939 6.3:-8961563 None:intergenic
GGTGGATTCTTGACTCATTG+TGG 0.591311 6.3:+8961415 MS.gene86113:CDS
CAATGAATGGGAGATTGGGA+TGG 0.594500 6.3:+8961531 MS.gene86113:CDS
TCAAGAATCCACCAATTGAA+GGG 0.598039 6.3:-8961405 None:intergenic
TCCAGCACAGATACTTTCAG+TGG 0.599209 6.3:-8961449 None:intergenic
ATAGAGGCCTAATCGCAAGC+TGG 0.599547 6.3:+8961356 MS.gene86113:CDS
AAACTTGCCAAGTGATTCTG+TGG 0.611965 6.3:-8961097 None:intergenic
GAGAGAAAGGAAAGATGATG+AGG 0.614867 6.3:+8961614 MS.gene86113:CDS
AAACTATTAGAGTTTGCTTG+GGG 0.622826 6.3:+8961232 MS.gene86113:CDS
GCTGGTGAATGAATTGATGG+TGG 0.628703 6.3:+8961591 MS.gene86113:CDS
TCAAAGTCCACAGAATCACT+TGG 0.630309 6.3:+8961090 MS.gene86113:CDS
CTGGTGAATGAATTGATGGT+GGG 0.645448 6.3:+8961592 MS.gene86113:CDS
AGAATCCACCAATTGAAGGG+TGG 0.656748 6.3:-8961402 None:intergenic
GGCTTGAATCCAAAGAACCA+AGG 0.662388 6.3:+8961161 MS.gene86113:CDS
ACAAATATTAGGGAATGTCG+AGG 0.663984 6.3:-8961038 None:intergenic
GGCAATTGAGTTGAAGCAGG+CGG 0.664760 6.3:+8961642 MS.gene86113:CDS
GAGGAGGACACGAGACCTGG+AGG 0.686814 6.3:+8961664 MS.gene86113:CDS
CACCAATGTGAAGAGAGATG+AGG 0.694346 6.3:+8961561 MS.gene86113:CDS
CTTGGACAAAGTGATCAATG+AGG 0.804364 6.3:+8961702 MS.gene86113:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! CAGATATATATGCAATGAAT+GGG + chr6.3:8961519-8961538 MS.gene86113:CDS 25.0%
! GACTTAAAAGTGAAGATAAA+GGG - chr6.3:8961072-8961091 None:intergenic 25.0%
! TGACTTAAAAGTGAAGATAA+AGG - chr6.3:8961073-8961092 None:intergenic 25.0%
!! AAAAACTATTAGAGTTTGCT+TGG + chr6.3:8961230-8961249 MS.gene86113:CDS 25.0%
!! AAAACTATTAGAGTTTGCTT+GGG + chr6.3:8961231-8961250 MS.gene86113:CDS 25.0%
AGGTTGTTCATATATGAACT+TGG + chr6.3:8961684-8961703 MS.gene86113:CDS 30.0%
CAAGTTTAAGTACCAATCTT+TGG + chr6.3:8961113-8961132 MS.gene86113:CDS 30.0%
GCAGATATATATGCAATGAA+TGG + chr6.3:8961518-8961537 MS.gene86113:CDS 30.0%
GTGAATCAAATTTCAGATAG+AGG + chr6.3:8961340-8961359 MS.gene86113:CDS 30.0%
TTCCCTAATATTTGTGCTAT+TGG + chr6.3:8961046-8961065 MS.gene86113:CDS 30.0%
! AAACTATTAGAGTTTGCTTG+GGG + chr6.3:8961232-8961251 MS.gene86113:CDS 30.0%
!! CTGTTGTTTACGTGAATTTT+GGG + chr6.3:8961185-8961204 MS.gene86113:CDS 30.0%
!! TCTGTTGTTTACGTGAATTT+TGG + chr6.3:8961184-8961203 MS.gene86113:CDS 30.0%
ACAAATATTAGGGAATGTCG+AGG - chr6.3:8961041-8961060 None:intergenic 35.0%
ATATGCAATGAATGGGAGAT+TGG + chr6.3:8961526-8961545 MS.gene86113:CDS 35.0%
CATATATATCTGCAGTTTGC+TGG - chr6.3:8961511-8961530 None:intergenic 35.0%
GGCCAATAGCACAAATATTA+GGG - chr6.3:8961051-8961070 None:intergenic 35.0%
GTATTAAACCACCCTTCAAT+TGG + chr6.3:8961394-8961413 MS.gene86113:CDS 35.0%
TATGCAATGAATGGGAGATT+GGG + chr6.3:8961527-8961546 MS.gene86113:CDS 35.0%
TCAAGAATCCACCAATTGAA+GGG - chr6.3:8961408-8961427 None:intergenic 35.0%
TGGTTTAATACTTGCTCTTG+AGG - chr6.3:8961385-8961404 None:intergenic 35.0%
TTCATATATGAACAACCTCC+AGG - chr6.3:8961682-8961701 None:intergenic 35.0%
! AACCCTTTTTGTGGATCATT+AGG + chr6.3:8961272-8961291 MS.gene86113:CDS 35.0%
! TAGTTTTTCTGCAGTCATCA+CGG - chr6.3:8961218-8961237 None:intergenic 35.0%
!! TGACTCAGTTGTTTTGTCAT+CGG + chr6.3:8961312-8961331 MS.gene86113:CDS 35.0%
AAAAACGGCCAACACAACAT+CGG - chr6.3:8961478-8961497 None:intergenic 40.0%
AAACTTGCCAAGTGATTCTG+TGG - chr6.3:8961100-8961119 None:intergenic 40.0%
AAGACACCAAGTGTCTTGAT+TGG + chr6.3:8961140-8961159 MS.gene86113:CDS 40.0%
AGGAAAGATGATGAGGCAAA+AGG + chr6.3:8961621-8961640 MS.gene86113:CDS 40.0%
AGGCCTAATGATCCACAAAA+AGG - chr6.3:8961278-8961297 None:intergenic 40.0%
ATTAGGCCTGATCTTGTCAT+TGG + chr6.3:8961289-8961308 MS.gene86113:CDS 40.0%
CTTGGACAAAGTGATCAATG+AGG + chr6.3:8961702-8961721 MS.gene86113:CDS 40.0%
GAAGCTGGTGAATGAATTGA+TGG + chr6.3:8961588-8961607 MS.gene86113:CDS 40.0%
GAGAGAAAGGAAAGATGATG+AGG + chr6.3:8961614-8961633 MS.gene86113:CDS 40.0%
GATTCTTGACTCATTGTGGA+TGG + chr6.3:8961419-8961438 MS.gene86113:CDS 40.0%
GGCCTAATGATCCACAAAAA+GGG - chr6.3:8961277-8961296 None:intergenic 40.0%
GGGCCAATAGCACAAATATT+AGG - chr6.3:8961052-8961071 None:intergenic 40.0%
GGTGTCTTCTTTCCAAAGAT+TGG - chr6.3:8961128-8961147 None:intergenic 40.0%
GTCAAGAATCCACCAATTGA+AGG - chr6.3:8961409-8961428 None:intergenic 40.0%
TACCTCATCTCTCTTCACAT+TGG - chr6.3:8961566-8961585 None:intergenic 40.0%
TCAAAGTCCACAGAATCACT+TGG + chr6.3:8961090-8961109 MS.gene86113:CDS 40.0%
TTAAACCACCCTTCAATTGG+TGG + chr6.3:8961397-8961416 MS.gene86113:CDS 40.0%
TTCAAGCCAATCAAGACACT+TGG - chr6.3:8961149-8961168 None:intergenic 40.0%
TTCACGTAAACAACAGACCT+TGG - chr6.3:8961181-8961200 None:intergenic 40.0%
! AACAACAGACCTTGGTTCTT+TGG - chr6.3:8961173-8961192 None:intergenic 40.0%
! ATAGCAAGCAACCCTTTTTG+TGG + chr6.3:8961263-8961282 MS.gene86113:CDS 40.0%
! ATTAGAGTTTGCTTGGGGTT+TGG + chr6.3:8961237-8961256 MS.gene86113:CDS 40.0%
! CTGGTGAATGAATTGATGGT+GGG + chr6.3:8961592-8961611 MS.gene86113:CDS 40.0%
!! AAAGGCAATTGAGTTGAAGC+AGG + chr6.3:8961639-8961658 MS.gene86113:CDS 40.0%
AGAATCCACCAATTGAAGGG+TGG - chr6.3:8961405-8961424 None:intergenic 45.0%
CAATGAATGGGAGATTGGGA+TGG + chr6.3:8961531-8961550 MS.gene86113:CDS 45.0%
CACCAATGTGAAGAGAGATG+AGG + chr6.3:8961561-8961580 MS.gene86113:CDS 45.0%
GAGTCACCAATGACAAGATC+AGG - chr6.3:8961298-8961317 None:intergenic 45.0%
GCTGGTGAATGAATTGATGG+TGG + chr6.3:8961591-8961610 MS.gene86113:CDS 45.0%
GGCTTGAATCCAAAGAACCA+AGG + chr6.3:8961161-8961180 MS.gene86113:CDS 45.0%
TCCAGCACAGATACTTTCAG+TGG - chr6.3:8961452-8961471 None:intergenic 45.0%
! GGTGGATTCTTGACTCATTG+TGG + chr6.3:8961415-8961434 MS.gene86113:CDS 45.0%
!! ACCACTGAAAGTATCTGTGC+TGG + chr6.3:8961448-8961467 MS.gene86113:CDS 45.0%
!! GAATTGATGGTGGGAGAGAA+AGG + chr6.3:8961601-8961620 MS.gene86113:CDS 45.0%
ATAGAGGCCTAATCGCAAGC+TGG + chr6.3:8961356-8961375 MS.gene86113:CDS 50.0%
GAGAGATGAGGTAGAGAAGC+TGG + chr6.3:8961573-8961592 MS.gene86113:CDS 50.0%
!! AATTGAGTTGAAGCAGGCGG+AGG + chr6.3:8961645-8961664 MS.gene86113:CDS 50.0%
!! GGCAATTGAGTTGAAGCAGG+CGG + chr6.3:8961642-8961661 MS.gene86113:CDS 50.0%
!!! GTTGTGTTGGCCGTTTTTCG+CGG + chr6.3:8961480-8961499 MS.gene86113:CDS 50.0%
GAGGACACCAGCTTGCGATT+AGG - chr6.3:8961366-8961385 None:intergenic 55.0%
GCTGGCTGATCCGCGAAAAA+CGG - chr6.3:8961493-8961512 None:intergenic 55.0%
!! CTGGAGTGCCGATGTTGTGT+TGG + chr6.3:8961467-8961486 MS.gene86113:CDS 55.0%
! TGAGTTGAAGCAGGCGGAGG+AGG + chr6.3:8961648-8961667 MS.gene86113:CDS 60.0%
GAGGAGGACACGAGACCTGG+AGG + chr6.3:8961664-8961683 MS.gene86113:CDS 65.0%
GCGGAGGAGGACACGAGACC+TGG + chr6.3:8961661-8961680 MS.gene86113:CDS 70.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 8961025 8961750 8961025 ID=MS.gene86113
chr6.3 mRNA 8961025 8961750 8961025 ID=MS.gene86113.t1;Parent=MS.gene86113
chr6.3 exon 8961025 8961750 8961025 ID=MS.gene86113.t1.exon1;Parent=MS.gene86113.t1
chr6.3 CDS 8961025 8961750 8961025 ID=cds.MS.gene86113.t1;Parent=MS.gene86113.t1
Gene Sequence

>MS.gene86113

ATGAATGTTCTCTCCTCGACATTCCCTAATATTTGTGCTATTGGCCCTTTATCTTCACTTTTAAGTCAAAGTCCACAGAATCACTTGGCAAGTTTAAGTACCAATCTTTGGAAAGAAGACACCAAGTGTCTTGATTGGCTTGAATCCAAAGAACCAAGGTCTGTTGTTTACGTGAATTTTGGGAGCATGACCGTGATGACTGCAGAAAAACTATTAGAGTTTGCTTGGGGTTTGGCGAATAGCAAGCAACCCTTTTTGTGGATCATTAGGCCTGATCTTGTCATTGGTGACTCAGTTGTTTTGTCATCGGAGTTTGTGAATCAAATTTCAGATAGAGGCCTAATCGCAAGCTGGTGTCCTCAAGAGCAAGTATTAAACCACCCTTCAATTGGTGGATTCTTGACTCATTGTGGATGGAACTCAACCACTGAAAGTATCTGTGCTGGAGTGCCGATGTTGTGTTGGCCGTTTTTCGCGGATCAGCCAGCAAACTGCAGATATATATGCAATGAATGGGAGATTGGGATGGAAATTGACACCAATGTGAAGAGAGATGAGGTAGAGAAGCTGGTGAATGAATTGATGGTGGGAGAGAAAGGAAAGATGATGAGGCAAAAGGCAATTGAGTTGAAGCAGGCGGAGGAGGACACGAGACCTGGAGGTTGTTCATATATGAACTTGGACAAAGTGATCAATGAGGTGCTGCTGAAACAAAATCAAACTTAA
Protein sequence

>MS.gene86113.t1

MNVLSSTFPNICAIGPLSSLLSQSPQNHLASLSTNLWKEDTKCLDWLESKEPRSVVYVNFGSMTVMTAEKLLEFAWGLANSKQPFLWIIRPDLVIGDSVVLSSEFVNQISDRGLIASWCPQEQVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPANCRYICNEWEIGMEIDTNVKRDEVEKLVNELMVGEKGKMMRQKAIELKQAEEDTRPGGCSYMNLDKVINEVLLKQNQT