Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86725.t1 | AMP17768.1 | 97.4 | 544 | 10 | 1 | 1 | 544 | 1 | 540 | 8.80E-281 | 975.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86725.t1 | Q9SYD6 | 57.1 | 539 | 205 | 5 | 1 | 539 | 2 | 514 | 1.7e-147 | 524.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86725.t1 | A0A1S5QNQ4 | 97.4 | 544 | 10 | 1 | 1 | 544 | 1 | 540 | 6.3e-281 | 975.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050163 | MS.gene86725 | -0.800833 | 1.20E-48 | -1.69E-46 |
| MS.gene057658 | MS.gene86725 | -0.808116 | 3.63E-50 | -1.69E-46 |
| MS.gene059102 | MS.gene86725 | 0.863137 | 3.09E-64 | -1.69E-46 |
| MS.gene059677 | MS.gene86725 | -0.806073 | 9.82E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene45542 | MS.gene86725 | PPI |
| MS.gene86725 | MS.gene052066 | PPI |
| MS.gene78396 | MS.gene86725 | PPI |
| MS.gene31105 | MS.gene86725 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86725.t1 | MTR_3g029510 | 97.243 | 544 | 11 | 1 | 1 | 544 | 1 | 540 | 0.0 | 1058 |
| MS.gene86725.t1 | MTR_8g037175 | 72.795 | 533 | 136 | 2 | 17 | 543 | 1 | 530 | 0.0 | 771 |
| MS.gene86725.t1 | MTR_8g036660 | 70.642 | 545 | 149 | 3 | 1 | 540 | 69 | 607 | 0.0 | 755 |
| MS.gene86725.t1 | MTR_8g037170 | 70.642 | 545 | 149 | 3 | 1 | 540 | 1 | 539 | 0.0 | 754 |
| MS.gene86725.t1 | MTR_8g037170 | 68.100 | 558 | 154 | 4 | 1 | 540 | 1 | 552 | 0.0 | 752 |
| MS.gene86725.t1 | MTR_2g097900 | 58.745 | 526 | 179 | 3 | 17 | 539 | 16 | 506 | 0.0 | 591 |
| MS.gene86725.t1 | MTR_2g097900 | 56.430 | 381 | 128 | 3 | 17 | 394 | 16 | 361 | 1.05e-134 | 397 |
| MS.gene86725.t1 | MTR_5g099020 | 37.795 | 508 | 249 | 6 | 32 | 539 | 109 | 549 | 8.36e-104 | 323 |
| MS.gene86725.t1 | MTR_5g099020 | 37.795 | 508 | 249 | 6 | 32 | 539 | 109 | 549 | 1.33e-103 | 323 |
| MS.gene86725.t1 | MTR_7g070210 | 39.563 | 412 | 185 | 7 | 30 | 441 | 110 | 457 | 1.11e-69 | 232 |
| MS.gene86725.t1 | MTR_8g037130 | 82.692 | 52 | 9 | 0 | 17 | 68 | 1 | 52 | 4.57e-21 | 87.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86725.t1 | AT3G08040 | 62.949 | 529 | 175 | 5 | 14 | 541 | 12 | 520 | 0.0 | 608 |
| MS.gene86725.t1 | AT1G51340 | 57.328 | 539 | 204 | 6 | 1 | 539 | 2 | 514 | 0.0 | 562 |
| MS.gene86725.t1 | AT1G51340 | 57.328 | 539 | 204 | 6 | 1 | 539 | 2 | 514 | 0.0 | 562 |
| MS.gene86725.t1 | AT1G51340 | 57.328 | 539 | 204 | 6 | 1 | 539 | 2 | 514 | 0.0 | 562 |
| MS.gene86725.t1 | AT1G51340 | 58.904 | 511 | 188 | 5 | 29 | 539 | 20 | 508 | 0.0 | 551 |
| MS.gene86725.t1 | AT3G08040 | 62.295 | 427 | 148 | 5 | 116 | 541 | 2 | 416 | 4.99e-178 | 508 |
| MS.gene86725.t1 | AT1G51340 | 55.663 | 415 | 158 | 6 | 1 | 415 | 2 | 390 | 3.63e-134 | 395 |
| MS.gene86725.t1 | AT4G38380 | 39.448 | 507 | 247 | 5 | 35 | 539 | 33 | 481 | 7.26e-112 | 342 |
| MS.gene86725.t1 | AT4G38380 | 39.448 | 507 | 247 | 5 | 35 | 539 | 105 | 553 | 1.75e-111 | 343 |
| MS.gene86725.t1 | AT4G38380 | 39.448 | 507 | 247 | 5 | 35 | 539 | 105 | 553 | 1.75e-111 | 343 |
| MS.gene86725.t1 | AT4G38380 | 39.800 | 500 | 241 | 5 | 42 | 539 | 2 | 443 | 2.42e-111 | 339 |
| MS.gene86725.t1 | AT2G38330 | 40.358 | 503 | 230 | 7 | 38 | 538 | 79 | 513 | 1.71e-106 | 329 |
| MS.gene86725.t1 | AT4G38380 | 44.818 | 357 | 193 | 2 | 185 | 539 | 189 | 543 | 7.17e-96 | 302 |
| MS.gene86725.t1 | AT4G38380 | 45.714 | 70 | 38 | 0 | 35 | 104 | 105 | 174 | 6.17e-12 | 68.6 |
Find 113 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATTAGCCTTTGTCTTTGA+TGG | 0.249674 | 3.4:+22779111 | MS.gene86725:CDS |
| GTCTTTGATGGTGTGAACTA+TGG | 0.289357 | 3.4:+22779123 | MS.gene86725:CDS |
| TTTGCAGCTAAACCTCTATT+AGG | 0.292824 | 3.4:+22777315 | MS.gene86725:CDS |
| GAGGTTTAGCTGCAAATATA+AGG | 0.308083 | 3.4:-22777308 | None:intergenic |
| TCCTGCAGTGCTTCTCTCCT+TGG | 0.308788 | 3.4:+22777533 | MS.gene86725:CDS |
| AATACTGACCAAAGGGAAAA+TGG | 0.321677 | 3.4:-22776664 | None:intergenic |
| TCCAAACCTGGAGGCATGTT+TGG | 0.321814 | 3.4:-22778637 | None:intergenic |
| TAAGGGTTGCAGCTTGAATA+AGG | 0.333331 | 3.4:-22777290 | None:intergenic |
| TCCAAACATGCCTCCAGGTT+TGG | 0.334472 | 3.4:+22778636 | MS.gene86725:CDS |
| AACCTACCAATGACGTATAA+AGG | 0.351830 | 3.4:-22777597 | None:intergenic |
| TGGAATGCCGCCATTGGAAT+TGG | 0.352025 | 3.4:-22778617 | None:intergenic |
| ATTCTTTCTCTACAAGAGTA+AGG | 0.359214 | 3.4:+22779309 | MS.gene86725:CDS |
| ATGAGTCTTCGCATGTTTGC+TGG | 0.360088 | 3.4:+22779367 | MS.gene86725:CDS |
| TTTCAAGGTACCATCCTGTT+TGG | 0.366063 | 3.4:-22776832 | None:intergenic |
| CTTATAGACACAGCATTCAT+AGG | 0.370693 | 3.4:+22776218 | MS.gene86725:CDS |
| GCCATGCAAGGAATCTTTAG+AGG | 0.376294 | 3.4:+22777555 | MS.gene86725:CDS |
| TGTTGCCGAAGAAGATACTA+TGG | 0.380080 | 3.4:+22776698 | MS.gene86725:CDS |
| TGGTTTAGCTGTTGCAATAC+AGG | 0.386667 | 3.4:+22778682 | MS.gene86725:CDS |
| CGCTTATTCTGCATACTCCT+TGG | 0.398929 | 3.4:+22779158 | MS.gene86725:CDS |
| TTCGCATGTTTGCTGGTGTA+TGG | 0.406622 | 3.4:+22779374 | MS.gene86725:CDS |
| TGCAGGATGGGAACAGGAAC+AGG | 0.408714 | 3.4:+22779886 | MS.gene86725:intron |
| CTGTGTTTAACCAAGCTTCA+AGG | 0.409338 | 3.4:+22776637 | MS.gene86725:CDS |
| ACAATTCCTTTATACGTCAT+TGG | 0.414827 | 3.4:+22777591 | MS.gene86725:CDS |
| ACCTCATCTCTTCTCGCTGA+TGG | 0.416323 | 3.4:+22778662 | MS.gene86725:CDS |
| TGCTGCTAATGAGGCTGATA+AGG | 0.420820 | 3.4:-22778585 | None:intergenic |
| TTCAATAGGTGGTCTATTGT+TGG | 0.424542 | 3.4:+22778532 | MS.gene86725:intron |
| TGCATATGCAGGATGGGAAC+AGG | 0.431882 | 3.4:+22779880 | MS.gene86725:intron |
| CCGGGAGGCCTAGTCTGATT+AGG | 0.440861 | 3.4:-22778943 | None:intergenic |
| TAGGATATCATGGACGATAA+TGG | 0.443467 | 3.4:+22775400 | None:intergenic |
| AATCTTAAGTACTTAACAGC+TGG | 0.445268 | 3.4:-22777495 | None:intergenic |
| ATCTGCAAATCCTTCATGCT+TGG | 0.446669 | 3.4:-22778236 | None:intergenic |
| AAACCCATTGCACCTAATAG+AGG | 0.448781 | 3.4:-22777327 | None:intergenic |
| ATGTGCCTCTTCTTCCGTAT+AGG | 0.449916 | 3.4:-22777225 | None:intergenic |
| CCGGTCGAACTTGCGGCGGC+AGG | 0.453774 | 3.4:+22776603 | MS.gene86725:CDS |
| TCTTGAAGCAAATGATCATC+AGG | 0.455615 | 3.4:-22776792 | None:intergenic |
| TACTTAAGATTGAGAGCCTT+AGG | 0.458860 | 3.4:+22777507 | MS.gene86725:CDS |
| GCAGTTCAATGAAAGCATTA+AGG | 0.461480 | 3.4:+22776749 | MS.gene86725:CDS |
| AAACCTCTATTAGGTGCAAT+GGG | 0.462124 | 3.4:+22777324 | MS.gene86725:CDS |
| GTTGGAGGTGGATTATACTT+TGG | 0.465967 | 3.4:+22778884 | MS.gene86725:CDS |
| AGAAGCAGGTGCAACCAAAC+AGG | 0.466060 | 3.4:+22776818 | MS.gene86725:CDS |
| AGGTTTAGCTGCAAATATAA+GGG | 0.468515 | 3.4:-22777307 | None:intergenic |
| GCCAAGGAGAGAAGCACTGC+AGG | 0.469082 | 3.4:-22777534 | None:intergenic |
| TCTATCCATAGTATCTTCTT+CGG | 0.470302 | 3.4:-22776703 | None:intergenic |
| CTCTCTCTAGTAGTTGGAGG+TGG | 0.470542 | 3.4:+22778872 | MS.gene86725:CDS |
| AGAGTGAGATAAAACCTATA+CGG | 0.471433 | 3.4:+22777211 | MS.gene86725:CDS |
| CATGCGAAGACTCATATAGA+TGG | 0.476251 | 3.4:-22779359 | None:intergenic |
| CATGTTTGGAATGCCGCCAT+TGG | 0.477319 | 3.4:-22778623 | None:intergenic |
| TAAACCTCTATTAGGTGCAA+TGG | 0.484001 | 3.4:+22777323 | MS.gene86725:CDS |
| GTGGCCTCTGAGAAAACGCC+AGG | 0.490069 | 3.4:-22779911 | None:intergenic |
| ATTATAGTCTTTCTCAGCAA+AGG | 0.493012 | 3.4:-22778792 | None:intergenic |
| GCCTCATTAGCAGCAAGGTT+AGG | 0.495494 | 3.4:+22778593 | MS.gene86725:CDS |
| GTTGGACTCTCTCTAGTAGT+TGG | 0.497300 | 3.4:+22778866 | MS.gene86725:CDS |
| AAGCACTGCAGGAGCACCTA+AGG | 0.498166 | 3.4:-22777523 | None:intergenic |
| TCCCTAGCTAAGGAGATACT+TGG | 0.498581 | 3.4:+22776146 | MS.gene86725:CDS |
| TGCAAATCCTTCATGCTTGG+AGG | 0.500933 | 3.4:-22778233 | None:intergenic |
| AAATGGTAATCCTTGAAGCT+TGG | 0.501836 | 3.4:-22776647 | None:intergenic |
| GCAGCAACAGCAAGTGCAGA+TGG | 0.510544 | 3.4:-22776179 | None:intergenic |
| GGACTCTCTCTAGTAGTTGG+AGG | 0.514348 | 3.4:+22778869 | MS.gene86725:CDS |
| GGCATTCCAAACATGCCTCC+AGG | 0.515321 | 3.4:+22778631 | MS.gene86725:CDS |
| TGGGAACAGGAACAGGACCC+TGG | 0.518247 | 3.4:+22779893 | MS.gene86725:CDS |
| GAATGTCACTGCTATAACTC+TGG | 0.518341 | 3.4:-22778555 | None:intergenic |
| TACTTCAAATTAGGCATCAG+AGG | 0.520511 | 3.4:+22778032 | MS.gene86725:CDS |
| TCCCAAGTATCTCCTTAGCT+AGG | 0.521837 | 3.4:-22776148 | None:intergenic |
| TTCTTTCTCTACAAGAGTAA+GGG | 0.526412 | 3.4:+22779310 | MS.gene86725:CDS |
| GGGAATCCATCTTGAATACA+AGG | 0.528068 | 3.4:-22776127 | None:intergenic |
| ACCTAACCTTGCTGCTAATG+AGG | 0.528818 | 3.4:-22778594 | None:intergenic |
| CTTCTCTCCTTGGCCATGCA+AGG | 0.533820 | 3.4:+22777543 | MS.gene86725:CDS |
| CCCTAGCTAAGGAGATACTT+GGG | 0.534178 | 3.4:+22776147 | MS.gene86725:CDS |
| ATGTAGCCTTGTATTCAAGA+TGG | 0.535860 | 3.4:+22776121 | MS.gene86725:intron |
| AAAGATTCCTTGCATGGCCA+AGG | 0.537559 | 3.4:-22777550 | None:intergenic |
| CCTGCCGCCGCAAGTTCGAC+CGG | 0.538723 | 3.4:-22776603 | None:intergenic |
| TTGAAGTAAAATATGAGTAG+TGG | 0.539372 | 3.4:-22778017 | None:intergenic |
| CCCTCTAAAGATTCCTTGCA+TGG | 0.539576 | 3.4:-22777556 | None:intergenic |
| TCTTTGAAGAAAACTGATAG+AGG | 0.540796 | 3.4:-22775460 | None:intergenic |
| TTGCTTCAAGACATAGAAGC+AGG | 0.542101 | 3.4:+22776804 | MS.gene86725:CDS |
| CCTAATCAGACTAGGCCTCC+CGG | 0.542740 | 3.4:+22778943 | MS.gene86725:CDS |
| AGGCATGACTTCATTCGACT+TGG | 0.543190 | 3.4:-22776772 | None:intergenic |
| ACAGCATTCATAGGCCACTT+AGG | 0.544657 | 3.4:+22776227 | MS.gene86725:CDS |
| GGTGGATTATACTTTGGAGC+CGG | 0.547954 | 3.4:+22778890 | MS.gene86725:CDS |
| CAAGATGGATTCCCTAGCTA+AGG | 0.548364 | 3.4:+22776136 | MS.gene86725:CDS |
| GTGTCTATAAGAGAAGCAAT+TGG | 0.549405 | 3.4:-22776206 | None:intergenic |
| AAGTTGTAATACTGACCAAA+GGG | 0.554378 | 3.4:-22776671 | None:intergenic |
| ATCTTAAGTACTTAACAGCT+GGG | 0.560117 | 3.4:-22777494 | None:intergenic |
| CCCAAGTATCTCCTTAGCTA+GGG | 0.561981 | 3.4:-22776147 | None:intergenic |
| TTTAGGGCCGGTCGAACTTG+CGG | 0.564182 | 3.4:+22776596 | MS.gene86725:intron |
| CCATGCAAGGAATCTTTAGA+GGG | 0.568460 | 3.4:+22777556 | MS.gene86725:CDS |
| GAGATGAGGTCATCCAAACC+TGG | 0.571737 | 3.4:-22778649 | None:intergenic |
| GAAGTTGTAATACTGACCAA+AGG | 0.572451 | 3.4:-22776672 | None:intergenic |
| ATAATGCAGTCAAGAACAAG+TGG | 0.577108 | 3.4:+22775431 | MS.gene86725:CDS |
| GTATGCATTGAATGTCGCTA+TGG | 0.582469 | 3.4:+22777992 | MS.gene86725:CDS |
| AGCTTGGTTAAACACAGCAA+TGG | 0.584033 | 3.4:-22776631 | None:intergenic |
| ACAAAGGCTAATGAATTGAT+CGG | 0.585572 | 3.4:-22779102 | None:intergenic |
| TTAACAGCTGGGATAAGCAT+AGG | 0.585613 | 3.4:-22777483 | None:intergenic |
| TCTCCTACCTCCAAGCATGA+AGG | 0.589323 | 3.4:+22778226 | MS.gene86725:CDS |
| TCTTCTATTGTTACAAACAG+TGG | 0.592027 | 3.4:+22777183 | MS.gene86725:CDS |
| TAAAACCTATACGGAAGAAG+AGG | 0.593978 | 3.4:+22777220 | MS.gene86725:CDS |
| AATCCTTCATGCTTGGAGGT+AGG | 0.609737 | 3.4:-22778229 | None:intergenic |
| AGCGACATTCAATGCATACC+CGG | 0.610601 | 3.4:-22777988 | None:intergenic |
| TTGCAGCTTGAATAAGGCCA+AGG | 0.612326 | 3.4:-22777284 | None:intergenic |
| AGAGGCCACTCATTGTCTTG+AGG | 0.612667 | 3.4:+22779925 | MS.gene86725:CDS |
| AAGGTTAGGTCCAATTCCAA+TGG | 0.613997 | 3.4:+22778607 | MS.gene86725:CDS |
| TGTATCCTCAAGACAATGAG+TGG | 0.628054 | 3.4:-22779930 | None:intergenic |
| TATCAGCCTCATTAGCAGCA+AGG | 0.628449 | 3.4:+22778588 | MS.gene86725:CDS |
| AGGGCCGGTCGAACTTGCGG+CGG | 0.636828 | 3.4:+22776599 | MS.gene86725:intron |
| ACCATCAGCGAGAAGAGATG+AGG | 0.646463 | 3.4:-22778663 | None:intergenic |
| GTTATTCACCTAATCAGACT+AGG | 0.646571 | 3.4:+22778935 | MS.gene86725:CDS |
| GTTCACACCATCAAAGACAA+AGG | 0.648235 | 3.4:-22779118 | None:intergenic |
| GCATGTTTGCTGGTGTATGG+AGG | 0.655745 | 3.4:+22779377 | MS.gene86725:CDS |
| AAGTAACTACTGCTGCAACA+AGG | 0.664120 | 3.4:+22778816 | MS.gene86725:CDS |
| GTTAGGTCCAATTCCAATGG+CGG | 0.671669 | 3.4:+22778610 | MS.gene86725:CDS |
| GCAGGTGCAACCAAACAGGA+TGG | 0.671712 | 3.4:+22776822 | MS.gene86725:CDS |
| TGGCCTCTGAGAAAACGCCA+GGG | 0.690960 | 3.4:-22779910 | None:intergenic |
| ATGAGGTCATCCAAACCTGG+AGG | 0.722033 | 3.4:-22778646 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATAACAAATTATAAAAAA+TGG | - | chr3.4:22779215-22779234 | None:intergenic | 10.0% |
| !!! | ATATTTATCTTTTTTTTTGT+AGG | + | chr3.4:22777455-22777474 | MS.gene86725:intron | 10.0% |
| !! | AACATAAACCTAATATTATA+GGG | + | chr3.4:22775935-22775954 | MS.gene86725:intron | 15.0% |
| !! | CTTGAAAATATATTTATAAG+TGG | + | chr3.4:22777690-22777709 | MS.gene86725:intron | 15.0% |
| !! | TCAACATTTATTTAGTAATT+TGG | + | chr3.4:22779238-22779257 | MS.gene86725:intron | 15.0% |
| !!! | AATATAATATGATAATGTGA+GGG | + | chr3.4:22776269-22776288 | MS.gene86725:intron | 15.0% |
| !!! | CTAAAATCAACAAATAATTT+TGG | + | chr3.4:22776008-22776027 | MS.gene86725:intron | 15.0% |
| !!! | CTAAAATGTTATTTAAGATT+TGG | - | chr3.4:22775690-22775709 | None:intergenic | 15.0% |
| !! | AAACATGCATAAAATGTTTA+TGG | + | chr3.4:22779804-22779823 | MS.gene86725:intron | 20.0% |
| !! | CAAAAAACACTATTATTGTT+GGG | + | chr3.4:22776042-22776061 | MS.gene86725:intron | 20.0% |
| !! | CAACATAAACCTAATATTAT+AGG | + | chr3.4:22775934-22775953 | MS.gene86725:intron | 20.0% |
| !! | GAAAATATATTTATAAGTGG+TGG | + | chr3.4:22777693-22777712 | MS.gene86725:intron | 20.0% |
| !! | GTAATATTAACGCTTAAATT+AGG | - | chr3.4:22778732-22778751 | None:intergenic | 20.0% |
| !! | TCAAAAAACACTATTATTGT+TGG | + | chr3.4:22776041-22776060 | MS.gene86725:intron | 20.0% |
| !!! | AAATCAACAAATAATTTTGG+AGG | + | chr3.4:22776011-22776030 | MS.gene86725:intron | 20.0% |
| !!! | ATATAATATGATAATGTGAG+GGG | + | chr3.4:22776270-22776289 | MS.gene86725:intron | 20.0% |
| !!! | CAATATAATATGATAATGTG+AGG | + | chr3.4:22776268-22776287 | MS.gene86725:intron | 20.0% |
| !!! | CTCATATTTTACTTCAAATT+AGG | + | chr3.4:22778023-22778042 | MS.gene86725:CDS | 20.0% |
| !!! | GAAAAAGAAACTCTAAAAAT+AGG | + | chr3.4:22775773-22775792 | MS.gene86725:intron | 20.0% |
| !!! | TATATTGTACTAGTCTTAAT+TGG | + | chr3.4:22776507-22776526 | MS.gene86725:intron | 20.0% |
| !!! | TTGTGTATAAATGTCTATTT+TGG | + | chr3.4:22776908-22776927 | MS.gene86725:intron | 20.0% |
| ! | AAAGTTAATGAGAGAAGATT+TGG | + | chr3.4:22777901-22777920 | MS.gene86725:intron | 25.0% |
| ! | AATATAGTTCACATATTGCA+AGG | - | chr3.4:22775860-22775879 | None:intergenic | 25.0% |
| ! | ACAGTACGATATTCTATTAA+AGG | - | chr3.4:22776471-22776490 | None:intergenic | 25.0% |
| ! | ATACTATCATGGAAAGTTTA+GGG | - | chr3.4:22779513-22779532 | None:intergenic | 25.0% |
| ! | ATTTGAATTTGCATCTGATA+AGG | - | chr3.4:22777154-22777173 | None:intergenic | 25.0% |
| ! | CAAAAAAATGAACCAAGTTA+GGG | - | chr3.4:22777949-22777968 | None:intergenic | 25.0% |
| ! | CAAACATGGAAAAATAAAGA+TGG | - | chr3.4:22776891-22776910 | None:intergenic | 25.0% |
| ! | CAATGTGATTAAGATATTCT+TGG | - | chr3.4:22779747-22779766 | None:intergenic | 25.0% |
| ! | CAGTACGATATTCTATTAAA+GGG | - | chr3.4:22776470-22776489 | None:intergenic | 25.0% |
| ! | GAAAAAAAAATGTACCTAAG+TGG | - | chr3.4:22776244-22776263 | None:intergenic | 25.0% |
| ! | GACATAAATATAATCTTGCA+CGG | - | chr3.4:22775829-22775848 | None:intergenic | 25.0% |
| ! | GTTTCTTAAAAATGGTATGT+TGG | + | chr3.4:22778265-22778284 | MS.gene86725:intron | 25.0% |
| ! | TAAAAATGGTATGTTGGAAT+TGG | + | chr3.4:22778271-22778290 | MS.gene86725:intron | 25.0% |
| ! | TAGACATTTATACACAAACA+TGG | - | chr3.4:22776905-22776924 | None:intergenic | 25.0% |
| ! | TATACTATCATGGAAAGTTT+AGG | - | chr3.4:22779514-22779533 | None:intergenic | 25.0% |
| ! | TATTATTGTTGGGACTAAAA+AGG | + | chr3.4:22776052-22776071 | MS.gene86725:intron | 25.0% |
| ! | TCTTGTATGATAGATTATCA+TGG | + | chr3.4:22779674-22779693 | MS.gene86725:intron | 25.0% |
| ! | TTAAAAATGCAAACTTACCA+AGG | - | chr3.4:22779178-22779197 | None:intergenic | 25.0% |
| ! | TTAAGACTAGTACAATATAC+TGG | - | chr3.4:22776506-22776525 | None:intergenic | 25.0% |
| ! | TTGAAAAATGAGACGAAAAA+TGG | + | chr3.4:22776849-22776868 | MS.gene86725:CDS | 25.0% |
| ! | TTGAAGTAAAATATGAGTAG+TGG | - | chr3.4:22778020-22778039 | None:intergenic | 25.0% |
| ! | TTTGTTTCAATTTCAATAGG+TGG | + | chr3.4:22778521-22778540 | MS.gene86725:intron | 25.0% |
| !! | ATTTTCCGGTTTCTTAAAAA+TGG | + | chr3.4:22778257-22778276 | MS.gene86725:CDS | 25.0% |
| !! | GACAAAATGATGATACTTTT+AGG | + | chr3.4:22778156-22778175 | MS.gene86725:intron | 25.0% |
| !! | GGATTTGTTTCAATTTCAAT+AGG | + | chr3.4:22778518-22778537 | MS.gene86725:intron | 25.0% |
| !! | TTCTTTGTTCAATTTTCGTA+TGG | - | chr3.4:22779771-22779790 | None:intergenic | 25.0% |
| !!! | AACATTTTTGGAAAATACTC+CGG | - | chr3.4:22778912-22778931 | None:intergenic | 25.0% |
| !!! | ACATACCATTTTTAAGAAAC+CGG | - | chr3.4:22778265-22778284 | None:intergenic | 25.0% |
| !!! | ATTTGGTATTCTGTTTTTTC+AGG | + | chr3.4:22779255-22779274 | MS.gene86725:intron | 25.0% |
| !!! | ATTTTTCGTCTCATTTTTCA+AGG | - | chr3.4:22776850-22776869 | None:intergenic | 25.0% |
| !!! | CTATGGTTTTATTTAGTTTC+CGG | + | chr3.4:22777969-22777988 | MS.gene86725:intron | 25.0% |
| !!! | GTTGTTTTCATATACTATCA+TGG | - | chr3.4:22779524-22779543 | None:intergenic | 25.0% |
| !!! | GTTTTAGTCCCTATAATATT+AGG | - | chr3.4:22775946-22775965 | None:intergenic | 25.0% |
| !!! | TATGGTTTTATTTAGTTTCC+GGG | + | chr3.4:22777970-22777989 | MS.gene86725:intron | 25.0% |
| !!! | TCAAGTTTTTTAACCTAACA+TGG | + | chr3.4:22779606-22779625 | MS.gene86725:intron | 25.0% |
| !!! | TCACTTTTTTCATGTGTTTA+GGG | + | chr3.4:22776580-22776599 | MS.gene86725:intron | 25.0% |
| !!! | TGATACTTTTAGGTACATTA+TGG | + | chr3.4:22778166-22778185 | MS.gene86725:intron | 25.0% |
| !!! | TTCACTTTTTTCATGTGTTT+AGG | + | chr3.4:22776579-22776598 | MS.gene86725:intron | 25.0% |
| AAGTTGTAATACTGACCAAA+GGG | - | chr3.4:22776674-22776693 | None:intergenic | 30.0% | |
| AATCTTAAGTACTTAACAGC+TGG | - | chr3.4:22777498-22777517 | None:intergenic | 30.0% | |
| ACAAAGGCTAATGAATTGAT+CGG | - | chr3.4:22779105-22779124 | None:intergenic | 30.0% | |
| ACAATTCCTTTATACGTCAT+TGG | + | chr3.4:22777591-22777610 | MS.gene86725:CDS | 30.0% | |
| AGACTGCTTGAAAAAGTTTA+TGG | + | chr3.4:22779446-22779465 | MS.gene86725:intron | 30.0% | |
| AGAGTGAGATAAAACCTATA+CGG | + | chr3.4:22777211-22777230 | MS.gene86725:CDS | 30.0% | |
| AGGTTTAGCTGCAAATATAA+GGG | - | chr3.4:22777310-22777329 | None:intergenic | 30.0% | |
| AGTCTTCTAATACTGATAGT+AGG | + | chr3.4:22776082-22776101 | MS.gene86725:intron | 30.0% | |
| ATATTCTTCACTTTACAAGC+TGG | + | chr3.4:22777716-22777735 | MS.gene86725:intron | 30.0% | |
| ATCTTAAGTACTTAACAGCT+GGG | - | chr3.4:22777497-22777516 | None:intergenic | 30.0% | |
| ATTAAGTTTGCCTTTATCAC+AGG | + | chr3.4:22778754-22778773 | MS.gene86725:intron | 30.0% | |
| ATTATAGTCTTTCTCAGCAA+AGG | - | chr3.4:22778795-22778814 | None:intergenic | 30.0% | |
| ATTCTTTCTCTACAAGAGTA+AGG | + | chr3.4:22779309-22779328 | MS.gene86725:CDS | 30.0% | |
| CTAGAATTTACTTACACGTT+CGG | + | chr3.4:22778497-22778516 | MS.gene86725:intron | 30.0% | |
| CTGATACTAATGTCACAAAA+TGG | + | chr3.4:22776981-22777000 | MS.gene86725:intron | 30.0% | |
| GCAAAAAAATGAACCAAGTT+AGG | - | chr3.4:22777950-22777969 | None:intergenic | 30.0% | |
| TAGACCGTCTGATTAAAATT+TGG | - | chr3.4:22778368-22778387 | None:intergenic | 30.0% | |
| TCTATCCATAGTATCTTCTT+CGG | - | chr3.4:22776706-22776725 | None:intergenic | 30.0% | |
| TCTTAATTGGAGTTGTAACA+AGG | + | chr3.4:22776520-22776539 | MS.gene86725:intron | 30.0% | |
| TCTTCTATTGTTACAAACAG+TGG | + | chr3.4:22777183-22777202 | MS.gene86725:CDS | 30.0% | |
| TTCTTTCTCTACAAGAGTAA+GGG | + | chr3.4:22779310-22779329 | MS.gene86725:CDS | 30.0% | |
| ! | ACTTATTCACCTTTGTTTCT+TGG | + | chr3.4:22775511-22775530 | MS.gene86725:intron | 30.0% |
| ! | GTGAATAACAGCAACATTTT+TGG | - | chr3.4:22778924-22778943 | None:intergenic | 30.0% |
| ! | TCTTTGAAGAAAACTGATAG+AGG | - | chr3.4:22775463-22775482 | None:intergenic | 30.0% |
| !! | ACTGCCAAATTTTAATCAGA+CGG | + | chr3.4:22778361-22778380 | MS.gene86725:intron | 30.0% |
| !! | ATTAGACTCTCTAAAGCTTA+AGG | + | chr3.4:22775647-22775666 | MS.gene86725:intron | 30.0% |
| !! | CAAGGTTCATTTTAATGTTG+TGG | + | chr3.4:22776538-22776557 | MS.gene86725:intron | 30.0% |
| !! | TACAAGAGTAAGGGTTTTAT+TGG | + | chr3.4:22779319-22779338 | MS.gene86725:CDS | 30.0% |
| !! | TTAGACTCTCTAAAGCTTAA+GGG | + | chr3.4:22775648-22775667 | MS.gene86725:intron | 30.0% |
| !!! | ATGAGTTTTGTTTTAGGAGT+TGG | + | chr3.4:22778848-22778867 | MS.gene86725:CDS | 30.0% |
| !!! | CTGCAAATGAGTTTTGTTTT+AGG | + | chr3.4:22778842-22778861 | MS.gene86725:CDS | 30.0% |
| !!! | CTTGGTTCATTTTTTTGCTA+TGG | + | chr3.4:22777952-22777971 | MS.gene86725:intron | 30.0% |
| !!! | TATTCTGTTTTTTCAGGTCT+TGG | + | chr3.4:22779261-22779280 | MS.gene86725:intron | 30.0% |
| !!! | TTTACAAGCTGGTTTTGTAA+GGG | + | chr3.4:22777727-22777746 | MS.gene86725:intron | 30.0% |
| AAACCTCTATTAGGTGCAAT+GGG | + | chr3.4:22777324-22777343 | MS.gene86725:CDS | 35.0% | |
| AAATGGTAATCCTTGAAGCT+TGG | - | chr3.4:22776650-22776669 | None:intergenic | 35.0% | |
| AACATGTCAAATGCATATGC+AGG | + | chr3.4:22779869-22779888 | MS.gene86725:intron | 35.0% | |
| AACCTACCAATGACGTATAA+AGG | - | chr3.4:22777600-22777619 | None:intergenic | 35.0% | |
| AATACTGACCAAAGGGAAAA+TGG | - | chr3.4:22776667-22776686 | None:intergenic | 35.0% | |
| AATGAGACGAAAAATGGAGA+TGG | + | chr3.4:22776855-22776874 | MS.gene86725:CDS | 35.0% | |
| AGCCTCTTGTGTAAAAAACA+GGG | + | chr3.4:22776367-22776386 | MS.gene86725:intron | 35.0% | |
| AGTCTCGAGATAAAAATGGT+CGG | - | chr3.4:22778422-22778441 | None:intergenic | 35.0% | |
| ATAATGCAGTCAAGAACAAG+TGG | + | chr3.4:22775431-22775450 | MS.gene86725:CDS | 35.0% | |
| ATTAGTATCAGTGTCTGTGT+TGG | - | chr3.4:22776972-22776991 | None:intergenic | 35.0% | |
| CTTATAGACACAGCATTCAT+AGG | + | chr3.4:22776218-22776237 | MS.gene86725:CDS | 35.0% | |
| CTTGTGTAAAAAACAGGGTA+AGG | + | chr3.4:22776372-22776391 | MS.gene86725:intron | 35.0% | |
| GAAGTTGTAATACTGACCAA+AGG | - | chr3.4:22776675-22776694 | None:intergenic | 35.0% | |
| GACTAGTACAATATACTGGT+TGG | - | chr3.4:22776502-22776521 | None:intergenic | 35.0% | |
| GAGGTTTAGCTGCAAATATA+AGG | - | chr3.4:22777311-22777330 | None:intergenic | 35.0% | |
| GTGTATGATTCTTAACAACG+TGG | - | chr3.4:22777656-22777675 | None:intergenic | 35.0% | |
| GTGTCTATAAGAGAAGCAAT+TGG | - | chr3.4:22776209-22776228 | None:intergenic | 35.0% | |
| GTTATTCACCTAATCAGACT+AGG | + | chr3.4:22778935-22778954 | MS.gene86725:CDS | 35.0% | |
| GTTGTGCTAGGAAAATATAC+CGG | - | chr3.4:22778965-22778984 | None:intergenic | 35.0% | |
| GTTGTTGTCATGTGACTAAA+AGG | + | chr3.4:22776315-22776334 | MS.gene86725:intron | 35.0% | |
| TAAAACCTATACGGAAGAAG+AGG | + | chr3.4:22777220-22777239 | MS.gene86725:CDS | 35.0% | |
| TAAACCTCTATTAGGTGCAA+TGG | + | chr3.4:22777323-22777342 | MS.gene86725:CDS | 35.0% | |
| TACTTAAGATTGAGAGCCTT+AGG | + | chr3.4:22777507-22777526 | MS.gene86725:CDS | 35.0% | |
| TACTTCAAATTAGGCATCAG+AGG | + | chr3.4:22778032-22778051 | MS.gene86725:CDS | 35.0% | |
| TACTTTCGATGTAACTGTGA+AGG | + | chr3.4:22775748-22775767 | MS.gene86725:intron | 35.0% | |
| TAGCCTCTTGTGTAAAAAAC+AGG | + | chr3.4:22776366-22776385 | MS.gene86725:intron | 35.0% | |
| TATTCTATTAAAGGGCAACC+CGG | - | chr3.4:22776462-22776481 | None:intergenic | 35.0% | |
| TCGGATCAAGCAAAATTCTA+CGG | + | chr3.4:22777823-22777842 | MS.gene86725:intron | 35.0% | |
| TCTTGAAGCAAATGATCATC+AGG | - | chr3.4:22776795-22776814 | None:intergenic | 35.0% | |
| TTCAATAGGTGGTCTATTGT+TGG | + | chr3.4:22778532-22778551 | MS.gene86725:intron | 35.0% | |
| TTCCAGTCTCGAGATAAAAA+TGG | - | chr3.4:22778426-22778445 | None:intergenic | 35.0% | |
| TTCCTTTATACGTCATTGGT+AGG | + | chr3.4:22777595-22777614 | MS.gene86725:intron | 35.0% | |
| TTGTGCTAGGAAAATATACC+GGG | - | chr3.4:22778964-22778983 | None:intergenic | 35.0% | |
| TTTGCAGCTAAACCTCTATT+AGG | + | chr3.4:22777315-22777334 | MS.gene86725:CDS | 35.0% | |
| ! | AAAACTAGAGTCGTCGATTA+AGG | - | chr3.4:22779632-22779651 | None:intergenic | 35.0% |
| ! | AAGGATTACCATTTTCCCTT+TGG | + | chr3.4:22776656-22776675 | MS.gene86725:CDS | 35.0% |
| ! | AGAATTTTGCTTGATCCGAT+AGG | - | chr3.4:22777822-22777841 | None:intergenic | 35.0% |
| ! | CAGTTTTCTTCAAAGATGCA+AGG | + | chr3.4:22775467-22775486 | MS.gene86725:CDS | 35.0% |
| ! | GAATTTTGCTTGATCCGATA+GGG | - | chr3.4:22777821-22777840 | None:intergenic | 35.0% |
| ! | TATTCACCTTTGTTTCTTGG+AGG | + | chr3.4:22775514-22775533 | MS.gene86725:intron | 35.0% |
| ! | TGAAGGATTTGCAGATTTTC+CGG | + | chr3.4:22778243-22778262 | MS.gene86725:CDS | 35.0% |
| !! | ATGTAGCCTTGTATTCAAGA+TGG | + | chr3.4:22776121-22776140 | MS.gene86725:intron | 35.0% |
| !! | GCAGTTCAATGAAAGCATTA+AGG | + | chr3.4:22776749-22776768 | MS.gene86725:CDS | 35.0% |
| !! | GCATCAACAGCATTACTTTT+CGG | + | chr3.4:22777255-22777274 | MS.gene86725:CDS | 35.0% |
| !! | TCATTAGCCTTTGTCTTTGA+TGG | + | chr3.4:22779111-22779130 | MS.gene86725:CDS | 35.0% |
| !!! | CTATTTTGGTGTGAATTTGC+TGG | + | chr3.4:22776922-22776941 | MS.gene86725:intron | 35.0% |
| !!! | CTTTACAAGCTGGTTTTGTA+AGG | + | chr3.4:22777726-22777745 | MS.gene86725:intron | 35.0% |
| !!! | GACGACTCTAGTTTTTAACA+TGG | + | chr3.4:22779637-22779656 | MS.gene86725:intron | 35.0% |
| !!! | GTAAGGGTTTTATTGGTATC+TGG | + | chr3.4:22779326-22779345 | MS.gene86725:CDS | 35.0% |
| !!! | TACCCTGTTTTTTACACAAG+AGG | - | chr3.4:22776372-22776391 | None:intergenic | 35.0% |
| !!! | TTTTTTCATGTGTTTAGGGC+CGG | + | chr3.4:22776584-22776603 | MS.gene86725:intron | 35.0% |
| AAACCCATTGCACCTAATAG+AGG | - | chr3.4:22777330-22777349 | None:intergenic | 40.0% | |
| AAGGTTAGGTCCAATTCCAA+TGG | + | chr3.4:22778607-22778626 | MS.gene86725:CDS | 40.0% | |
| AAGTAACTACTGCTGCAACA+AGG | + | chr3.4:22778816-22778835 | MS.gene86725:CDS | 40.0% | |
| AGCTTGGTTAAACACAGCAA+TGG | - | chr3.4:22776634-22776653 | None:intergenic | 40.0% | |
| AGGGACTAAAACGAAAAACG+AGG | + | chr3.4:22775954-22775973 | MS.gene86725:intron | 40.0% | |
| ATAAGCGCTCATCATATACG+TGG | - | chr3.4:22779571-22779590 | None:intergenic | 40.0% | |
| ATCTGCAAATCCTTCATGCT+TGG | - | chr3.4:22778239-22778258 | None:intergenic | 40.0% | |
| CATGCGAAGACTCATATAGA+TGG | - | chr3.4:22779362-22779381 | None:intergenic | 40.0% | |
| CCATGCAAGGAATCTTTAGA+GGG | + | chr3.4:22777556-22777575 | MS.gene86725:CDS | 40.0% | |
| CGAGATAAAAATGGTCGGAT+CGG | - | chr3.4:22778417-22778436 | None:intergenic | 40.0% | |
| CGGATCAAGCAAAATTCTAC+GGG | + | chr3.4:22777824-22777843 | MS.gene86725:intron | 40.0% | |
| CTGTGTTTAACCAAGCTTCA+AGG | + | chr3.4:22776637-22776656 | MS.gene86725:CDS | 40.0% | |
| GAATGTCACTGCTATAACTC+TGG | - | chr3.4:22778558-22778577 | None:intergenic | 40.0% | |
| GCAACAATACACCAAATGGT+GGG | + | chr3.4:22776397-22776416 | MS.gene86725:intron | 40.0% | |
| GGATCAAGCAAAATTCTACG+GGG | + | chr3.4:22777825-22777844 | MS.gene86725:intron | 40.0% | |
| GGGAATCCATCTTGAATACA+AGG | - | chr3.4:22776130-22776149 | None:intergenic | 40.0% | |
| GTATGCATTGAATGTCGCTA+TGG | + | chr3.4:22777992-22778011 | MS.gene86725:CDS | 40.0% | |
| GTCAAATGCATATGCAGGAT+GGG | + | chr3.4:22779874-22779893 | MS.gene86725:intron | 40.0% | |
| GTCATGTGACTAAAAGGTCA+CGG | + | chr3.4:22776321-22776340 | MS.gene86725:intron | 40.0% | |
| GTTCACACCATCAAAGACAA+AGG | - | chr3.4:22779121-22779140 | None:intergenic | 40.0% | |
| TAAGGGTTGCAGCTTGAATA+AGG | - | chr3.4:22777293-22777312 | None:intergenic | 40.0% | |
| TCATGTGACTAAAAGGTCAC+GGG | + | chr3.4:22776322-22776341 | MS.gene86725:intron | 40.0% | |
| TGCAACAATACACCAAATGG+TGG | + | chr3.4:22776396-22776415 | MS.gene86725:intron | 40.0% | |
| TGGTTTAGCTGTTGCAATAC+AGG | + | chr3.4:22778682-22778701 | MS.gene86725:CDS | 40.0% | |
| TGTCAAATGCATATGCAGGA+TGG | + | chr3.4:22779873-22779892 | MS.gene86725:intron | 40.0% | |
| TGTTGCCGAAGAAGATACTA+TGG | + | chr3.4:22776698-22776717 | MS.gene86725:CDS | 40.0% | |
| TTAACAGCTGGGATAAGCAT+AGG | - | chr3.4:22777486-22777505 | None:intergenic | 40.0% | |
| TTAATCAGACGGTCTAGATG+TGG | + | chr3.4:22778372-22778391 | MS.gene86725:intron | 40.0% | |
| TTGCTTCAAGACATAGAAGC+AGG | + | chr3.4:22776804-22776823 | MS.gene86725:CDS | 40.0% | |
| TTTCGATGTAACTGTGAAGG+TGG | + | chr3.4:22775751-22775770 | MS.gene86725:intron | 40.0% | |
| ! | ACAATATACTGGTTGGACGA+TGG | - | chr3.4:22776495-22776514 | None:intergenic | 40.0% |
| ! | CAACGTGGACTCAAATTTTC+AGG | - | chr3.4:22777641-22777660 | None:intergenic | 40.0% |
| ! | GTTAGTGCTTTTCCCTAACT+TGG | + | chr3.4:22777934-22777953 | MS.gene86725:intron | 40.0% |
| ! | TTTCAAGGTACCATCCTGTT+TGG | - | chr3.4:22776835-22776854 | None:intergenic | 40.0% |
| !! | GACCATTTTTATCTCGAGAC+TGG | + | chr3.4:22778421-22778440 | MS.gene86725:intron | 40.0% |
| !! | GTCTTTGATGGTGTGAACTA+TGG | + | chr3.4:22779123-22779142 | MS.gene86725:CDS | 40.0% |
| !! | GTTGGAGGTGGATTATACTT+TGG | + | chr3.4:22778884-22778903 | MS.gene86725:CDS | 40.0% |
| AAAGATTCCTTGCATGGCCA+AGG | - | chr3.4:22777553-22777572 | None:intergenic | 45.0% | |
| AAGAGGCTAAGACTGTTTCC+AGG | - | chr3.4:22776355-22776374 | None:intergenic | 45.0% | |
| AATCCTTCATGCTTGGAGGT+AGG | - | chr3.4:22778232-22778251 | None:intergenic | 45.0% | |
| ACAGCATTCATAGGCCACTT+AGG | + | chr3.4:22776227-22776246 | MS.gene86725:CDS | 45.0% | |
| ACCTAACCTTGCTGCTAATG+AGG | - | chr3.4:22778597-22778616 | None:intergenic | 45.0% | |
| AGCGACATTCAATGCATACC+CGG | - | chr3.4:22777991-22778010 | None:intergenic | 45.0% | |
| AGGCATGACTTCATTCGACT+TGG | - | chr3.4:22776775-22776794 | None:intergenic | 45.0% | |
| ATGAGTCTTCGCATGTTTGC+TGG | + | chr3.4:22779367-22779386 | MS.gene86725:CDS | 45.0% | |
| ATGTGCCTCTTCTTCCGTAT+AGG | - | chr3.4:22777228-22777247 | None:intergenic | 45.0% | |
| CCCAAGTATCTCCTTAGCTA+GGG | - | chr3.4:22776150-22776169 | None:intergenic | 45.0% | |
| CCCTAGCTAAGGAGATACTT+GGG | + | chr3.4:22776147-22776166 | MS.gene86725:CDS | 45.0% | |
| CGCTTATTCTGCATACTCCT+TGG | + | chr3.4:22779158-22779177 | MS.gene86725:CDS | 45.0% | |
| CTAATCTACTGCGTTGTGCT+AGG | - | chr3.4:22778977-22778996 | None:intergenic | 45.0% | |
| GATAATGTGAGGGGTAACCT+TGG | + | chr3.4:22776279-22776298 | MS.gene86725:intron | 45.0% | |
| GCCATGCAAGGAATCTTTAG+AGG | + | chr3.4:22777555-22777574 | MS.gene86725:CDS | 45.0% | |
| GCGAGAATTGCCTGTGATAA+AGG | - | chr3.4:22778767-22778786 | None:intergenic | 45.0% | |
| GGCTGCAACAATACACCAAA+TGG | + | chr3.4:22776393-22776412 | MS.gene86725:intron | 45.0% | |
| GTGCTGCATAGGATATGAGA+GGG | + | chr3.4:22777080-22777099 | MS.gene86725:intron | 45.0% | |
| GTTAGGTCCAATTCCAATGG+CGG | + | chr3.4:22778610-22778629 | MS.gene86725:CDS | 45.0% | |
| GTTGGACTCTCTCTAGTAGT+TGG | + | chr3.4:22778866-22778885 | MS.gene86725:CDS | 45.0% | |
| GTTGTGTTGCAGCAACAAAC+TGG | - | chr3.4:22779083-22779102 | None:intergenic | 45.0% | |
| TATCAGCCTCATTAGCAGCA+AGG | + | chr3.4:22778588-22778607 | MS.gene86725:CDS | 45.0% | |
| TCCCAAGTATCTCCTTAGCT+AGG | - | chr3.4:22776151-22776170 | None:intergenic | 45.0% | |
| TCCCTAGCTAAGGAGATACT+TGG | + | chr3.4:22776146-22776165 | MS.gene86725:CDS | 45.0% | |
| TGCAAATCCTTCATGCTTGG+AGG | - | chr3.4:22778236-22778255 | None:intergenic | 45.0% | |
| TGCTAGGAAAATATACCGGG+AGG | - | chr3.4:22778961-22778980 | None:intergenic | 45.0% | |
| TGCTGCTAATGAGGCTGATA+AGG | - | chr3.4:22778588-22778607 | None:intergenic | 45.0% | |
| TGTCGATGTCAAGTCGGTAT+TGG | + | chr3.4:22777026-22777045 | MS.gene86725:intron | 45.0% | |
| TTGCAGCTTGAATAAGGCCA+AGG | - | chr3.4:22777287-22777306 | None:intergenic | 45.0% | |
| TTTATTGAGCCCGTCCCTAT+CGG | + | chr3.4:22777804-22777823 | MS.gene86725:intron | 45.0% | |
| TTTGCTTGATCCGATAGGGA+CGG | - | chr3.4:22777817-22777836 | None:intergenic | 45.0% | |
| ! | ACGCCTTCAATCTGAAGTGT+CGG | + | chr3.4:22777058-22777077 | MS.gene86725:intron | 45.0% |
| ! | CAAGATGGATTCCCTAGCTA+AGG | + | chr3.4:22776136-22776155 | MS.gene86725:CDS | 45.0% |
| ! | CCCTCTAAAGATTCCTTGCA+TGG | - | chr3.4:22777559-22777578 | None:intergenic | 45.0% |
| ! | CTTGCACGGACTATAATCAG+AGG | - | chr3.4:22775815-22775834 | None:intergenic | 45.0% |
| ! | GGCAGTTCAAGTTTCATGCT+CGG | - | chr3.4:22778347-22778366 | None:intergenic | 45.0% |
| ! | TCGTCGATTAAGGCCATGTT+AGG | - | chr3.4:22779622-22779641 | None:intergenic | 45.0% |
| ! | TTCGCATGTTTGCTGGTGTA+TGG | + | chr3.4:22779374-22779393 | MS.gene86725:CDS | 45.0% |
| !! | GAACTGCTTTTCTGCTGCTT+TGG | - | chr3.4:22776736-22776755 | None:intergenic | 45.0% |
| !! | GGTGGATTATACTTTGGAGC+CGG | + | chr3.4:22778890-22778909 | MS.gene86725:CDS | 45.0% |
| !! | TTACTTTTCGGCACAGTCCT+TGG | + | chr3.4:22777267-22777286 | MS.gene86725:CDS | 45.0% |
| !!! | AAAAATATAGTTTTATTATA+AGG | - | chr3.4:22775714-22775733 | None:intergenic | 5.0% |
| !!! | AACATAAATTTTTTTATTTT+AGG | + | chr3.4:22775983-22776002 | MS.gene86725:intron | 5.0% |
| !!! | AATAAAAAAATTTATGTTTT+TGG | - | chr3.4:22775981-22776000 | None:intergenic | 5.0% |
| !!! | ACATAAATTTTTTTATTTTA+GGG | + | chr3.4:22775984-22776003 | MS.gene86725:intron | 5.0% |
| ACCATCAGCGAGAAGAGATG+AGG | - | chr3.4:22778666-22778685 | None:intergenic | 50.0% | |
| ACCTCATCTCTTCTCGCTGA+TGG | + | chr3.4:22778662-22778681 | MS.gene86725:CDS | 50.0% | |
| AGAAGCAGGTGCAACCAAAC+AGG | + | chr3.4:22776818-22776837 | MS.gene86725:CDS | 50.0% | |
| ATAAAGCTCCCGCATACGCA+GGG | - | chr3.4:22776436-22776455 | None:intergenic | 50.0% | |
| ATGAGGTCATCCAAACCTGG+AGG | - | chr3.4:22778649-22778668 | None:intergenic | 50.0% | |
| CCTGCTCCTCCAAGAAACAA+AGG | - | chr3.4:22775523-22775542 | None:intergenic | 50.0% | |
| CTCTCTCTAGTAGTTGGAGG+TGG | + | chr3.4:22778872-22778891 | MS.gene86725:CDS | 50.0% | |
| GAGATGAGGTCATCCAAACC+TGG | - | chr3.4:22778652-22778671 | None:intergenic | 50.0% | |
| GAGTGCGTTTCACGCATGTT+TGG | + | chr3.4:22777107-22777126 | MS.gene86725:intron | 50.0% | |
| GCCTCATTAGCAGCAAGGTT+AGG | + | chr3.4:22778593-22778612 | MS.gene86725:CDS | 50.0% | |
| GGACTCTCTCTAGTAGTTGG+AGG | + | chr3.4:22778869-22778888 | MS.gene86725:CDS | 50.0% | |
| TAACCTTGGCGCAACTGGTA+AGG | + | chr3.4:22776293-22776312 | MS.gene86725:intron | 50.0% | |
| TCCAAACATGCCTCCAGGTT+TGG | + | chr3.4:22778636-22778655 | MS.gene86725:CDS | 50.0% | |
| TCTCCTACCTCCAAGCATGA+AGG | + | chr3.4:22778226-22778245 | MS.gene86725:CDS | 50.0% | |
| TGCATATGCAGGATGGGAAC+AGG | + | chr3.4:22779880-22779899 | MS.gene86725:intron | 50.0% | |
| TGGAATGCCGCCATTGGAAT+TGG | - | chr3.4:22778620-22778639 | None:intergenic | 50.0% | |
| TTGCTTGATCCGATAGGGAC+GGG | - | chr3.4:22777816-22777835 | None:intergenic | 50.0% | |
| ! | CACGTGTGTCGATGTCAAGT+CGG | + | chr3.4:22777020-22777039 | MS.gene86725:intron | 50.0% |
| ! | CATGTTTGGAATGCCGCCAT+TGG | - | chr3.4:22778626-22778645 | None:intergenic | 50.0% |
| ! | CCTTTGTTTCTTGGAGGAGC+AGG | + | chr3.4:22775520-22775539 | MS.gene86725:intron | 50.0% |
| ! | GCACCGACACTTCAGATTGA+AGG | - | chr3.4:22777064-22777083 | None:intergenic | 50.0% |
| ! | GCATGTTTGCTGGTGTATGG+AGG | + | chr3.4:22779377-22779396 | MS.gene86725:CDS | 50.0% |
| ! | GGTGCTGCATAGGATATGAG+AGG | + | chr3.4:22777079-22777098 | MS.gene86725:intron | 50.0% |
| ! | TATGCGGGAGCTTTATGCAC+CGG | + | chr3.4:22776440-22776459 | MS.gene86725:intron | 50.0% |
| ! | TCCAAACCTGGAGGCATGTT+TGG | - | chr3.4:22778640-22778659 | None:intergenic | 50.0% |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr3.4:22776334-22776353 | MS.gene86725:intron | 55.0% | |
| CAACCTTACCAGTTGCGCCA+AGG | - | chr3.4:22776299-22776318 | None:intergenic | 55.0% | |
| CATAAAGCTCCCGCATACGC+AGG | - | chr3.4:22776437-22776456 | None:intergenic | 55.0% | |
| CCTAATCAGACTAGGCCTCC+CGG | + | chr3.4:22778943-22778962 | MS.gene86725:CDS | 55.0% | |
| CGACTTGACATCGACACACG+TGG | - | chr3.4:22777022-22777041 | None:intergenic | 55.0% | |
| CTTCTCTCCTTGGCCATGCA+AGG | + | chr3.4:22777543-22777562 | MS.gene86725:CDS | 55.0% | |
| GCAGCAACAGCAAGTGCAGA+TGG | - | chr3.4:22776182-22776201 | None:intergenic | 55.0% | |
| GCAGGTGCAACCAAACAGGA+TGG | + | chr3.4:22776822-22776841 | MS.gene86725:CDS | 55.0% | |
| GGCATTCCAAACATGCCTCC+AGG | + | chr3.4:22778631-22778650 | MS.gene86725:CDS | 55.0% | |
| TCCTGCAGTGCTTCTCTCCT+TGG | + | chr3.4:22777533-22777552 | MS.gene86725:CDS | 55.0% | |
| TGCAGGATGGGAACAGGAAC+AGG | + | chr3.4:22779886-22779905 | MS.gene86725:intron | 55.0% | |
| ! | ATGCGGGAGCTTTATGCACC+GGG | + | chr3.4:22776441-22776460 | MS.gene86725:intron | 55.0% |
| ! | TGGCCTCTGAGAAAACGCCA+GGG | - | chr3.4:22779913-22779932 | None:intergenic | 55.0% |
| ! | TTTAGGGCCGGTCGAACTTG+CGG | + | chr3.4:22776596-22776615 | MS.gene86725:intron | 55.0% |
| !! | AAGCACTGCAGGAGCACCTA+AGG | - | chr3.4:22777526-22777545 | None:intergenic | 55.0% |
| !! | CTGAAGTGTCGGTGCTGCAT+AGG | + | chr3.4:22777069-22777088 | MS.gene86725:intron | 55.0% |
| AGGGGTAACCTTGGCGCAAC+TGG | + | chr3.4:22776288-22776307 | MS.gene86725:intron | 60.0% | |
| CCGGGAGGCCTAGTCTGATT+AGG | - | chr3.4:22778946-22778965 | None:intergenic | 60.0% | |
| TGGGAACAGGAACAGGACCC+TGG | + | chr3.4:22779893-22779912 | MS.gene86725:CDS | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr3.4:22776409-22776428 | MS.gene86725:intron | 60.0% |
| ! | GGACCCTGGCGTTTTCTCAG+AGG | + | chr3.4:22779907-22779926 | MS.gene86725:CDS | 60.0% |
| ! | GTGGCCTCTGAGAAAACGCC+AGG | - | chr3.4:22779914-22779933 | None:intergenic | 60.0% |
| !! | GCCAAGGAGAGAAGCACTGC+AGG | - | chr3.4:22777537-22777556 | None:intergenic | 60.0% |
| CATACGCAGGGTCCGGGAAG+GGG | - | chr3.4:22776424-22776443 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr3.4:22776411-22776430 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | + | chr3.4:22776424-22776443 | MS.gene86725:intron | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | - | chr3.4:22776425-22776444 | None:intergenic | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | + | chr3.4:22776425-22776444 | MS.gene86725:intron | 65.0% | |
| AGGGCCGGTCGAACTTGCGG+CGG | + | chr3.4:22776599-22776618 | MS.gene86725:intron | 70.0% | |
| CCTGCCGCCGCAAGTTCGAC+CGG | - | chr3.4:22776606-22776625 | None:intergenic | 70.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | - | chr3.4:22776426-22776445 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | - | chr3.4:22776430-22776449 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | - | chr3.4:22776431-22776450 | None:intergenic | 70.0% | |
| CCGGTCGAACTTGCGGCGGC+AGG | + | chr3.4:22776603-22776622 | MS.gene86725:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 22775409 | 22779945 | 22775409 | ID=MS.gene86725 |
| chr3.4 | mRNA | 22775409 | 22779945 | 22775409 | ID=MS.gene86725.t1;Parent=MS.gene86725 |
| chr3.4 | exon | 22775409 | 22775488 | 22775409 | ID=MS.gene86725.t1.exon1;Parent=MS.gene86725.t1 |
| chr3.4 | CDS | 22775409 | 22775488 | 22775409 | ID=cds.MS.gene86725.t1;Parent=MS.gene86725.t1 |
| chr3.4 | exon | 22776127 | 22776248 | 22776127 | ID=MS.gene86725.t1.exon2;Parent=MS.gene86725.t1 |
| chr3.4 | CDS | 22776127 | 22776248 | 22776127 | ID=cds.MS.gene86725.t1;Parent=MS.gene86725.t1 |
| chr3.4 | exon | 22776601 | 22776876 | 22776601 | ID=MS.gene86725.t1.exon3;Parent=MS.gene86725.t1 |
| chr3.4 | CDS | 22776601 | 22776876 | 22776601 | ID=cds.MS.gene86725.t1;Parent=MS.gene86725.t1 |
| chr3.4 | exon | 22777160 | 22777356 | 22777160 | ID=MS.gene86725.t1.exon4;Parent=MS.gene86725.t1 |
| chr3.4 | CDS | 22777160 | 22777356 | 22777160 | ID=cds.MS.gene86725.t1;Parent=MS.gene86725.t1 |
| chr3.4 | exon | 22777477 | 22777612 | 22777477 | ID=MS.gene86725.t1.exon5;Parent=MS.gene86725.t1 |
| chr3.4 | CDS | 22777477 | 22777612 | 22777477 | ID=cds.MS.gene86725.t1;Parent=MS.gene86725.t1 |
| chr3.4 | exon | 22777985 | 22778081 | 22777985 | ID=MS.gene86725.t1.exon6;Parent=MS.gene86725.t1 |
| chr3.4 | CDS | 22777985 | 22778081 | 22777985 | ID=cds.MS.gene86725.t1;Parent=MS.gene86725.t1 |
| chr3.4 | exon | 22778178 | 22778278 | 22778178 | ID=MS.gene86725.t1.exon7;Parent=MS.gene86725.t1 |
| chr3.4 | CDS | 22778178 | 22778278 | 22778178 | ID=cds.MS.gene86725.t1;Parent=MS.gene86725.t1 |
| chr3.4 | exon | 22778540 | 22778703 | 22778540 | ID=MS.gene86725.t1.exon8;Parent=MS.gene86725.t1 |
| chr3.4 | CDS | 22778540 | 22778703 | 22778540 | ID=cds.MS.gene86725.t1;Parent=MS.gene86725.t1 |
| chr3.4 | exon | 22778776 | 22778964 | 22778776 | ID=MS.gene86725.t1.exon9;Parent=MS.gene86725.t1 |
| chr3.4 | CDS | 22778776 | 22778964 | 22778776 | ID=cds.MS.gene86725.t1;Parent=MS.gene86725.t1 |
| chr3.4 | exon | 22779084 | 22779179 | 22779084 | ID=MS.gene86725.t1.exon10;Parent=MS.gene86725.t1 |
| chr3.4 | CDS | 22779084 | 22779179 | 22779084 | ID=cds.MS.gene86725.t1;Parent=MS.gene86725.t1 |
| chr3.4 | exon | 22779277 | 22779398 | 22779277 | ID=MS.gene86725.t1.exon11;Parent=MS.gene86725.t1 |
| chr3.4 | CDS | 22779277 | 22779398 | 22779277 | ID=cds.MS.gene86725.t1;Parent=MS.gene86725.t1 |
| chr3.4 | exon | 22779891 | 22779945 | 22779891 | ID=MS.gene86725.t1.exon12;Parent=MS.gene86725.t1 |
| chr3.4 | CDS | 22779891 | 22779945 | 22779891 | ID=cds.MS.gene86725.t1;Parent=MS.gene86725.t1 |
| Gene Sequence |
| Protein sequence |
