Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87512.t1 | XP_003604976.1 | 96.9 | 422 | 13 | 0 | 1 | 422 | 1 | 422 | 5.70E-227 | 796.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87512.t1 | Q56WD9 | 77.6 | 428 | 90 | 1 | 1 | 422 | 1 | 428 | 2.1e-185 | 649.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87512.t1 | G7JUJ9 | 96.9 | 422 | 13 | 0 | 1 | 422 | 1 | 422 | 4.1e-227 | 796.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049711 | MS.gene87512 | 0.835015 | 2.15E-56 | -1.69E-46 |
| MS.gene049807 | MS.gene87512 | 0.803889 | 2.81E-49 | -1.69E-46 |
| MS.gene051279 | MS.gene87512 | 0.821534 | 3.84E-53 | -1.69E-46 |
| MS.gene051744 | MS.gene87512 | 0.832822 | 7.59E-56 | -1.69E-46 |
| MS.gene052016 | MS.gene87512 | 0.81967 | 1.03E-52 | -1.69E-46 |
| MS.gene052463 | MS.gene87512 | 0.824965 | 6.06E-54 | -1.69E-46 |
| MS.gene052533 | MS.gene87512 | 0.807183 | 5.72E-50 | -1.69E-46 |
| MS.gene053144 | MS.gene87512 | 0.803162 | 3.98E-49 | -1.69E-46 |
| MS.gene05423 | MS.gene87512 | 0.804206 | 2.41E-49 | -1.69E-46 |
| MS.gene05454 | MS.gene87512 | 0.806783 | 6.96E-50 | -1.69E-46 |
| MS.gene054576 | MS.gene87512 | 0.821464 | 3.98E-53 | -1.69E-46 |
| MS.gene05552 | MS.gene87512 | 0.800256 | 1.57E-48 | -1.69E-46 |
| MS.gene055537 | MS.gene87512 | 0.802151 | 6.43E-49 | -1.69E-46 |
| MS.gene056677 | MS.gene87512 | 0.809148 | 2.18E-50 | -1.69E-46 |
| MS.gene05686 | MS.gene87512 | 0.81793 | 2.55E-52 | -1.69E-46 |
| MS.gene058668 | MS.gene87512 | 0.833341 | 5.64E-56 | -1.69E-46 |
| MS.gene059170 | MS.gene87512 | 0.820523 | 6.56E-53 | -1.69E-46 |
| MS.gene059774 | MS.gene87512 | 0.85397 | 1.68E-61 | -1.69E-46 |
| MS.gene060697 | MS.gene87512 | 0.851508 | 8.48E-61 | -1.69E-46 |
| MS.gene061047 | MS.gene87512 | 0.804565 | 2.03E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87512.t1 | MTR_4g022430 | 96.919 | 422 | 13 | 0 | 1 | 422 | 1 | 422 | 0.0 | 837 |
| MS.gene87512.t1 | MTR_1g047210 | 76.224 | 429 | 95 | 2 | 1 | 422 | 1 | 429 | 0.0 | 649 |
| MS.gene87512.t1 | MTR_4g134090 | 37.563 | 394 | 215 | 12 | 45 | 421 | 7 | 386 | 7.03e-63 | 208 |
| MS.gene87512.t1 | MTR_4g134090 | 37.150 | 393 | 218 | 10 | 45 | 421 | 14 | 393 | 1.55e-62 | 207 |
| MS.gene87512.t1 | MTR_5g098310 | 37.368 | 380 | 209 | 11 | 45 | 407 | 16 | 383 | 3.13e-60 | 201 |
| MS.gene87512.t1 | MTR_0449s0040 | 35.072 | 345 | 195 | 11 | 45 | 372 | 16 | 348 | 2.27e-44 | 158 |
| MS.gene87512.t1 | MTR_4g134090 | 33.721 | 258 | 142 | 11 | 45 | 285 | 7 | 252 | 8.22e-22 | 95.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87512.t1 | AT2G33150 | 77.570 | 428 | 90 | 1 | 1 | 422 | 1 | 428 | 0.0 | 672 |
| MS.gene87512.t1 | AT1G04710 | 76.777 | 422 | 96 | 1 | 1 | 422 | 1 | 420 | 0.0 | 652 |
| MS.gene87512.t1 | AT5G48880 | 72.390 | 431 | 108 | 3 | 1 | 422 | 1 | 429 | 0.0 | 645 |
| MS.gene87512.t1 | AT5G48880 | 72.390 | 431 | 108 | 3 | 1 | 422 | 1 | 429 | 0.0 | 645 |
| MS.gene87512.t1 | AT5G48880 | 72.390 | 431 | 108 | 3 | 1 | 422 | 1 | 429 | 0.0 | 645 |
| MS.gene87512.t1 | AT5G48880 | 76.903 | 381 | 86 | 1 | 44 | 422 | 6 | 386 | 0.0 | 620 |
| MS.gene87512.t1 | AT5G48230 | 38.903 | 383 | 203 | 11 | 43 | 407 | 5 | 374 | 4.81e-65 | 214 |
| MS.gene87512.t1 | AT5G48230 | 38.845 | 381 | 202 | 11 | 45 | 407 | 12 | 379 | 3.11e-64 | 212 |
| MS.gene87512.t1 | AT5G47720 | 35.714 | 392 | 225 | 11 | 45 | 421 | 14 | 393 | 4.73e-61 | 204 |
| MS.gene87512.t1 | AT5G47720 | 35.714 | 392 | 225 | 11 | 45 | 421 | 14 | 393 | 4.73e-61 | 204 |
| MS.gene87512.t1 | AT5G47720 | 35.714 | 392 | 225 | 11 | 45 | 421 | 14 | 393 | 4.84e-61 | 203 |
| MS.gene87512.t1 | AT5G47720 | 35.714 | 392 | 225 | 11 | 45 | 421 | 14 | 393 | 4.84e-61 | 203 |
| MS.gene87512.t1 | AT5G47720 | 35.714 | 392 | 225 | 11 | 45 | 421 | 21 | 400 | 5.84e-61 | 203 |
Find 93 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAGATGAAGTAACTGAATT+TGG | 0.181174 | 4.1:-75906620 | None:intergenic |
| TGTTTATTCCTGCAAGAAAT+TGG | 0.182136 | 4.1:+75910833 | MS.gene87512:CDS |
| CAAAAGGGGCTTCCTATTCT+TGG | 0.273850 | 4.1:+75910005 | MS.gene87512:CDS |
| TTCCTATTCTTGGAATCTTC+AGG | 0.284215 | 4.1:+75910015 | MS.gene87512:CDS |
| AATGGTGGTGCCATGGCTTT+TGG | 0.285762 | 4.1:+75910882 | MS.gene87512:CDS |
| ATGACACAAGATAGTATTTC+GGG | 0.297886 | 4.1:+75908767 | MS.gene87512:CDS |
| CAGGCTTCATTCTGTTCTGC+TGG | 0.312949 | 4.1:+75906750 | MS.gene87512:intron |
| GTTTATTCCTGCAAGAAATT+GGG | 0.319184 | 4.1:+75910834 | MS.gene87512:CDS |
| TATCCGACCAAACACAAATT+TGG | 0.330622 | 4.1:+75909729 | MS.gene87512:CDS |
| TCTTATTTGATGAAGGAATT+GGG | 0.337864 | 4.1:+75908729 | MS.gene87512:intron |
| ATCAAGCCCCAATTTCTTGC+AGG | 0.345463 | 4.1:-75910841 | None:intergenic |
| TCAATTGCTCTTTCTGATCC+TGG | 0.360216 | 4.1:-75908236 | None:intergenic |
| TATGACACAAGATAGTATTT+CGG | 0.364038 | 4.1:+75908766 | MS.gene87512:CDS |
| GCCGCAGCTGCAACAGCATC+TGG | 0.368332 | 4.1:+75909539 | MS.gene87512:CDS |
| GCTGAAGCCTGCATTCAAAA+AGG | 0.374024 | 4.1:+75909765 | MS.gene87512:CDS |
| GAACCCACCTTTGTAGAAAC+TGG | 0.377832 | 4.1:-75909584 | None:intergenic |
| TGAAGGAATTGGGGCTGGAT+TGG | 0.386923 | 4.1:+75908739 | MS.gene87512:intron |
| AGATCTACCAAATTTGTGTT+TGG | 0.390275 | 4.1:-75909736 | None:intergenic |
| TTCTGTTCTGCTGGACAAGC+AGG | 0.395935 | 4.1:+75906759 | MS.gene87512:CDS |
| CCGTGACTGTCTTCTTCCTA+TGG | 0.396967 | 4.1:+75909348 | MS.gene87512:CDS |
| AAGTTTGTGGATCCTAAAAC+TGG | 0.399124 | 4.1:+75909670 | MS.gene87512:intron |
| TGGTGTAGATCCTGCTGTCA+TGG | 0.432233 | 4.1:+75910619 | MS.gene87512:CDS |
| GAGAAGTGTGGCTGTACAAA+AGG | 0.433377 | 4.1:+75909989 | MS.gene87512:CDS |
| ACTGAGGCAAGTAGATCATC+TGG | 0.434573 | 4.1:-75907482 | None:intergenic |
| CGTGGCAAAGATTGTCGGTT+TGG | 0.435771 | 4.1:+75911326 | MS.gene87512:CDS |
| CTGCTGCACCATCACTAACT+TGG | 0.445534 | 4.1:-75909950 | None:intergenic |
| AAAGCTGGGTTCTATGACAT+TGG | 0.454280 | 4.1:+75908633 | MS.gene87512:CDS |
| CCAGCAGATTTCACTGCAGC+TGG | 0.456335 | 4.1:-75910665 | None:intergenic |
| TTCTTGATTACCTGCAGTTG+TGG | 0.457288 | 4.1:-75909794 | None:intergenic |
| AGCGTCGTGGCAAAGATTGT+CGG | 0.460837 | 4.1:+75911321 | MS.gene87512:CDS |
| GAAGTAGGCGACATAGTTGT+AGG | 0.467982 | 4.1:+75908200 | MS.gene87512:CDS |
| ATCAGCAACTGCTTGAAGTC+CGG | 0.469800 | 4.1:-75908595 | None:intergenic |
| GAGAATGTTGCACAGCGTTA+CGG | 0.482335 | 4.1:+75909382 | MS.gene87512:CDS |
| ACCAGATGCTGTTGCAGCTG+CGG | 0.484759 | 4.1:-75909540 | None:intergenic |
| CAAACAAAGGTCAATGTCAA+TGG | 0.487757 | 4.1:+75910864 | MS.gene87512:CDS |
| TTTGATGAAGGAATTGGGGC+TGG | 0.488144 | 4.1:+75908734 | MS.gene87512:intron |
| ACTTTACCTGTGGCACCTAA+AGG | 0.495733 | 4.1:-75910909 | None:intergenic |
| GATCCTGCTGTCATGGGTGT+TGG | 0.497368 | 4.1:+75910626 | MS.gene87512:CDS |
| GTCAATAGACAATGTTCGTC+CGG | 0.498701 | 4.1:+75908576 | MS.gene87512:CDS |
| GGACATCCTTTAGGTGCCAC+AGG | 0.509498 | 4.1:+75910903 | MS.gene87512:CDS |
| GTTGCTGCTTACATAAAAGC+TGG | 0.510537 | 4.1:+75908618 | MS.gene87512:CDS |
| CTACCAAATTTGTGTTTGGT+CGG | 0.515258 | 4.1:-75909732 | None:intergenic |
| CTTATTTGATGAAGGAATTG+GGG | 0.515706 | 4.1:+75908730 | MS.gene87512:intron |
| CTATTTGCAAAGCAAAGCGT+GGG | 0.519769 | 4.1:+75907441 | MS.gene87512:CDS |
| TTTATTCCTGCAAGAAATTG+GGG | 0.520297 | 4.1:+75910835 | MS.gene87512:CDS |
| CGTGACTGTCTTCTTCCTAT+GGG | 0.524327 | 4.1:+75909349 | MS.gene87512:CDS |
| GGTGTAGATCCTGCTGTCAT+GGG | 0.527409 | 4.1:+75910620 | MS.gene87512:CDS |
| AGAAGTGTGGCTGTACAAAA+GGG | 0.529709 | 4.1:+75909990 | MS.gene87512:CDS |
| ATTTCATGCTTACAGCAGCC+TGG | 0.533043 | 4.1:-75909426 | None:intergenic |
| GCAGCTGGAATAGCAAAAGC+TGG | 0.539208 | 4.1:-75910650 | None:intergenic |
| CCAGCTGCAGTGAAATCTGC+TGG | 0.541500 | 4.1:+75910665 | MS.gene87512:CDS |
| TTGCTGCTTACATAAAAGCT+GGG | 0.552144 | 4.1:+75908619 | MS.gene87512:CDS |
| TACCTGAAGATTCCAAGAAT+AGG | 0.554484 | 4.1:-75910017 | None:intergenic |
| GAAATTAGGTCGAGTCTCAC+AGG | 0.560910 | 4.1:+75909513 | MS.gene87512:intron |
| GGACCAACACCCATGACAGC+AGG | 0.561197 | 4.1:-75910629 | None:intergenic |
| ACTATGTCGCCTACTTCACT+TGG | 0.567748 | 4.1:-75908194 | None:intergenic |
| ACAGTCACGGGCTTGTGCAA+AGG | 0.568802 | 4.1:-75909335 | None:intergenic |
| GGTGTAATCTCGATGTGTAT+AGG | 0.569461 | 4.1:+75911347 | MS.gene87512:CDS |
| AATGTGGAACCAAGTGAAGT+AGG | 0.571979 | 4.1:+75908185 | MS.gene87512:CDS |
| AAGGATGGAACCACAACTGC+AGG | 0.572568 | 4.1:+75909784 | MS.gene87512:CDS |
| TGTTCTGCTGGACAAGCAGG+TGG | 0.574333 | 4.1:+75906762 | MS.gene87512:CDS |
| AGTTAGTGATGGTGCAGCAG+CGG | 0.577291 | 4.1:+75909953 | MS.gene87512:CDS |
| CATAGGAAGAAGACAGTCAC+GGG | 0.584715 | 4.1:-75909347 | None:intergenic |
| CAATGTCAATGGTGGTGCCA+TGG | 0.590035 | 4.1:+75910875 | MS.gene87512:CDS |
| TTCTCAGAAGTTATTCCCAT+AGG | 0.594952 | 4.1:-75909364 | None:intergenic |
| AATCATTCCAGTTTCTACAA+AGG | 0.595392 | 4.1:+75909577 | MS.gene87512:CDS |
| AAGAGCAATTGAGTGCAGAA+TGG | 0.597887 | 4.1:+75908247 | MS.gene87512:CDS |
| TCTACTTGCCTCAGTTCTCA+AGG | 0.598314 | 4.1:+75907490 | MS.gene87512:CDS |
| GCGTTACGGTGTGACAAGGC+AGG | 0.598535 | 4.1:+75909396 | MS.gene87512:CDS |
| TGACTTGTATGAAATAAATG+AGG | 0.599911 | 4.1:+75910706 | MS.gene87512:CDS |
| GACAAGGCAGGAACAAGACC+AGG | 0.604845 | 4.1:+75909408 | MS.gene87512:CDS |
| GCTATTTGCAAAGCAAAGCG+TGG | 0.605886 | 4.1:+75907440 | MS.gene87512:CDS |
| CACAGCGTTACGGTGTGACA+AGG | 0.607695 | 4.1:+75909392 | MS.gene87512:CDS |
| ATTACTGTTTCTGTTGACGA+TGG | 0.615568 | 4.1:+75909706 | MS.gene87512:CDS |
| TAAAGGATGTCCAAAAGCCA+TGG | 0.623221 | 4.1:-75910892 | None:intergenic |
| AATGCTAGCCAAGTTAGTGA+TGG | 0.641945 | 4.1:+75909942 | MS.gene87512:CDS |
| GACACAAGATAGTATTTCGG+GGG | 0.646224 | 4.1:+75908769 | MS.gene87512:CDS |
| ACAAAGGTCAATGTCAATGG+TGG | 0.646397 | 4.1:+75910867 | MS.gene87512:CDS |
| CCATAGGAAGAAGACAGTCA+CGG | 0.648285 | 4.1:-75909348 | None:intergenic |
| TGTGATAGAGAAAACAAATG+TGG | 0.651302 | 4.1:+75908169 | MS.gene87512:CDS |
| AGGTGGATCCGAAAATGATG+TGG | 0.663290 | 4.1:+75906779 | MS.gene87512:CDS |
| TGTGGATCCTAAAACTGGAG+AGG | 0.664054 | 4.1:+75909675 | MS.gene87512:CDS |
| GGTTCGCAAAACTAACCCAA+AGG | 0.669027 | 4.1:+75908790 | MS.gene87512:CDS |
| AAAACTTACAGAGAGGTGAG+TGG | 0.673136 | 4.1:-75906648 | None:intergenic |
| GAAGTGTGGCTGTACAAAAG+GGG | 0.677244 | 4.1:+75909991 | MS.gene87512:CDS |
| ATTGGGGCTTGATCAAACAA+AGG | 0.679817 | 4.1:+75910851 | MS.gene87512:CDS |
| GCTTCTCATGAAGAGAAGTG+TGG | 0.688912 | 4.1:+75909977 | MS.gene87512:CDS |
| ATTTGCAAAGCAAAGCGTGG+GGG | 0.689702 | 4.1:+75907443 | MS.gene87512:CDS |
| TGTCTATTGACAGTTCGAAG+CGG | 0.694158 | 4.1:-75908564 | None:intergenic |
| TGACACAAGATAGTATTTCG+GGG | 0.700265 | 4.1:+75908768 | MS.gene87512:CDS |
| TATTTGCAAAGCAAAGCGTG+GGG | 0.719147 | 4.1:+75907442 | MS.gene87512:CDS |
| AGTCGTTACCTTGAGAACTG+AGG | 0.722347 | 4.1:-75907498 | None:intergenic |
| TTGAATGAGATGAAGCGTCG+TGG | 0.725198 | 4.1:+75911308 | MS.gene87512:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTATGAAAAGATTATAA+AGG | + | chr4.1:75909470-75909489 | MS.gene87512:intron | 10.0% |
| !! | CAAAAAACTAAAAAATAAAA+AGG | - | chr4.1:75907313-75907332 | None:intergenic | 10.0% |
| !! | TAAATATAAACTTATAAAAC+AGG | + | chr4.1:75910267-75910286 | MS.gene87512:intron | 10.0% |
| !!! | ATCTTTTCATAAATTTTTAT+AGG | - | chr4.1:75909465-75909484 | None:intergenic | 10.0% |
| !!! | CTTTTTATTTTTTAGTTTTT+TGG | + | chr4.1:75907311-75907330 | MS.gene87512:intron | 10.0% |
| !!! | TAATGTTTTCAAAAATTTTA+GGG | + | chr4.1:75907360-75907379 | MS.gene87512:intron | 10.0% |
| !! | AAATAGATCATTTATATTGA+AGG | + | chr4.1:75907133-75907152 | MS.gene87512:intron | 15.0% |
| !! | AACCTATTAAAATAATGAAA+AGG | - | chr4.1:75909311-75909330 | None:intergenic | 15.0% |
| !! | AACTTATCAACTATAAAAAA+TGG | + | chr4.1:75908070-75908089 | MS.gene87512:intron | 15.0% |
| !! | ACATTAGTAAACAAAAAAAT+AGG | - | chr4.1:75907346-75907365 | None:intergenic | 15.0% |
| !! | ATAAGTAAAAAAAGTTTCAA+AGG | - | chr4.1:75909283-75909302 | None:intergenic | 15.0% |
| !! | ATTGGTAAATACAAAAATAT+TGG | + | chr4.1:75907747-75907766 | MS.gene87512:intron | 15.0% |
| !! | TAAATACAAAAATATTGGAA+AGG | + | chr4.1:75907752-75907771 | MS.gene87512:intron | 15.0% |
| !!! | AACCTTTTCATTATTTTAAT+AGG | + | chr4.1:75909306-75909325 | MS.gene87512:intron | 15.0% |
| !!! | AATTCTTTTAATGTGAAATT+AGG | + | chr4.1:75909499-75909518 | MS.gene87512:intron | 15.0% |
| !!! | ATAACACTACAAATTTTAAA+AGG | - | chr4.1:75909628-75909647 | None:intergenic | 15.0% |
| !!! | CTAATGTTTTCAAAAATTTT+AGG | + | chr4.1:75907359-75907378 | MS.gene87512:intron | 15.0% |
| !!! | TAATTTTCACAAGTTATTAT+CGG | + | chr4.1:75906893-75906912 | MS.gene87512:intron | 15.0% |
| !! | AGAAAACTTTATTACAATCT+AGG | - | chr4.1:75909215-75909234 | None:intergenic | 20.0% |
| !! | ATAACAGGATTTATTAATTG+TGG | + | chr4.1:75907825-75907844 | MS.gene87512:intron | 20.0% |
| !! | TCAATATTTATCTAGATACA+TGG | + | chr4.1:75910186-75910205 | MS.gene87512:intron | 20.0% |
| !! | TGTAAATATTACACCAAATT+TGG | + | chr4.1:75910330-75910349 | MS.gene87512:intron | 20.0% |
| !! | TTATAATCAATGAGAAAATG+TGG | - | chr4.1:75909039-75909058 | None:intergenic | 20.0% |
| !!! | AAGTTACTGATTAATATTGA+AGG | + | chr4.1:75906814-75906833 | MS.gene87512:intron | 20.0% |
| !!! | CAGTTTTCTAAAATTACTAT+AGG | + | chr4.1:75907052-75907071 | MS.gene87512:intron | 20.0% |
| !!! | GATTTTGTTTATAAAGTTTG+TGG | + | chr4.1:75909657-75909676 | MS.gene87512:intron | 20.0% |
| !!! | TATCTTATGCTTTATTAGTT+TGG | + | chr4.1:75908106-75908125 | MS.gene87512:intron | 20.0% |
| !!! | TTTGGTGTAATATTTACAAT+AGG | - | chr4.1:75910328-75910347 | None:intergenic | 20.0% |
| !!! | TTTTAAAAGGAAATTCATCT+TGG | - | chr4.1:75909615-75909634 | None:intergenic | 20.0% |
| ! | AAAAATGTTCCTAATTCGAT+AGG | + | chr4.1:75910502-75910521 | MS.gene87512:intron | 25.0% |
| ! | AACAACAACAGATAAATAAG+CGG | - | chr4.1:75907703-75907722 | None:intergenic | 25.0% |
| ! | AACAGTAAATTCAATGTTGT+AGG | + | chr4.1:75910582-75910601 | MS.gene87512:intron | 25.0% |
| ! | AACTGAAGAAGTTATTTATC+AGG | - | chr4.1:75908842-75908861 | None:intergenic | 25.0% |
| ! | AAGTTTCAAAGGAAAATATG+TGG | - | chr4.1:75909272-75909291 | None:intergenic | 25.0% |
| ! | AATATCTTAGTGTACTCTTT+CGG | - | chr4.1:75911024-75911043 | None:intergenic | 25.0% |
| ! | ACTGTTTACTCATATCATTA+TGG | - | chr4.1:75910045-75910064 | None:intergenic | 25.0% |
| ! | ACTTTATGTTGCTATGATAA+AGG | + | chr4.1:75910426-75910445 | MS.gene87512:intron | 25.0% |
| ! | ATGAAGAACTTATTGAAATG+AGG | - | chr4.1:75908971-75908990 | None:intergenic | 25.0% |
| ! | ATTAAATCAATCTGTTCAAC+TGG | - | chr4.1:75911211-75911230 | None:intergenic | 25.0% |
| ! | GATTAGTGAACATTTATAAC+AGG | + | chr4.1:75907810-75907829 | MS.gene87512:intron | 25.0% |
| ! | GTAAACAAAAAAATAGGTTC+AGG | - | chr4.1:75907340-75907359 | None:intergenic | 25.0% |
| ! | GTACACTAAGATATTAAGAA+AGG | + | chr4.1:75911093-75911112 | MS.gene87512:intron | 25.0% |
| ! | TAATATCTTAGTGTACTCTT+TGG | - | chr4.1:75911089-75911108 | None:intergenic | 25.0% |
| ! | TATGACACAAGATAGTATTT+CGG | + | chr4.1:75908766-75908785 | MS.gene87512:CDS | 25.0% |
| ! | TCTAACTATATTTAACTGCA+GGG | + | chr4.1:75909919-75909938 | MS.gene87512:intron | 25.0% |
| ! | TGCAGTTAAATATAGTTAGA+GGG | - | chr4.1:75909919-75909938 | None:intergenic | 25.0% |
| ! | TTAGATGAAGTAACTGAATT+TGG | - | chr4.1:75906623-75906642 | None:intergenic | 25.0% |
| !! | ATATATCATGTGCATGTTTT+TGG | - | chr4.1:75908413-75908432 | None:intergenic | 25.0% |
| !! | ATTTATATTGAAGGTGTGTT+TGG | + | chr4.1:75907142-75907161 | MS.gene87512:intron | 25.0% |
| !! | CAAAATATCTAGAGTTCATT+TGG | + | chr4.1:75908037-75908056 | MS.gene87512:intron | 25.0% |
| !! | TCTTATTTGATGAAGGAATT+GGG | + | chr4.1:75908729-75908748 | MS.gene87512:intron | 25.0% |
| !! | TGACTTGTATGAAATAAATG+AGG | + | chr4.1:75910706-75910725 | MS.gene87512:CDS | 25.0% |
| !! | TTCTCCTTTTGCTAAATTTT+TGG | + | chr4.1:75909819-75909838 | MS.gene87512:intron | 25.0% |
| AAATATCTCAACTTTACCTG+TGG | - | chr4.1:75910922-75910941 | None:intergenic | 30.0% | |
| AACATGTAAAACTTACAGAG+AGG | - | chr4.1:75906658-75906677 | None:intergenic | 30.0% | |
| AATCATTCCAGTTTCTACAA+AGG | + | chr4.1:75909577-75909596 | MS.gene87512:CDS | 30.0% | |
| AATGTGAATCGAATAGACTA+TGG | + | chr4.1:75908878-75908897 | MS.gene87512:intron | 30.0% | |
| AATGTGCAATAGAAAGTTGT+TGG | - | chr4.1:75910761-75910780 | None:intergenic | 30.0% | |
| ACAAGCACATGATATTTCAT+TGG | + | chr4.1:75908330-75908349 | MS.gene87512:intron | 30.0% | |
| ACTTTATTACAATCTAGGTG+TGG | - | chr4.1:75909210-75909229 | None:intergenic | 30.0% | |
| AGATCTACCAAATTTGTGTT+TGG | - | chr4.1:75909739-75909758 | None:intergenic | 30.0% | |
| AGGATTTATTAATTGTGGCT+GGG | + | chr4.1:75907830-75907849 | MS.gene87512:intron | 30.0% | |
| ATATGAGTAAACAGTCACTT+TGG | + | chr4.1:75910050-75910069 | MS.gene87512:intron | 30.0% | |
| ATGAAATACGTGAAGTAAAC+AGG | - | chr4.1:75910949-75910968 | None:intergenic | 30.0% | |
| ATGACACAAGATAGTATTTC+GGG | + | chr4.1:75908767-75908786 | MS.gene87512:CDS | 30.0% | |
| ATTCTTTGTATCAGTGGAAA+TGG | - | chr4.1:75910976-75910995 | None:intergenic | 30.0% | |
| CAAATAAGAGGAAGAAGATT+AGG | - | chr4.1:75908718-75908737 | None:intergenic | 30.0% | |
| CAACTACTACGTAAGAAAAA+TGG | + | chr4.1:75907788-75907807 | MS.gene87512:intron | 30.0% | |
| CAATTCCTTCATCAAATAAG+AGG | - | chr4.1:75908730-75908749 | None:intergenic | 30.0% | |
| CTCTAACTATATTTAACTGC+AGG | + | chr4.1:75909918-75909937 | MS.gene87512:intron | 30.0% | |
| CTGCAGTTAAATATAGTTAG+AGG | - | chr4.1:75909920-75909939 | None:intergenic | 30.0% | |
| CTTATTTGATGAAGGAATTG+GGG | + | chr4.1:75908730-75908749 | MS.gene87512:intron | 30.0% | |
| CTTTATTACAATCTAGGTGT+GGG | - | chr4.1:75909209-75909228 | None:intergenic | 30.0% | |
| GCAGTTAAATATAGTTAGAG+GGG | - | chr4.1:75909918-75909937 | None:intergenic | 30.0% | |
| GGAAAATATGTGGAATTGAT+AGG | - | chr4.1:75909262-75909281 | None:intergenic | 30.0% | |
| GGATCCAAAAATTTAGCAAA+AGG | - | chr4.1:75909826-75909845 | None:intergenic | 30.0% | |
| GTTTATTCCTGCAAGAAATT+GGG | + | chr4.1:75910834-75910853 | MS.gene87512:CDS | 30.0% | |
| TAAACACTATGCATGTTTCT+AGG | - | chr4.1:75911121-75911140 | None:intergenic | 30.0% | |
| TAGACTCTATTTACATGTCA+TGG | + | chr4.1:75908676-75908695 | MS.gene87512:intron | 30.0% | |
| TATCTAAAAATGTACTTCCC+AGG | - | chr4.1:75910249-75910268 | None:intergenic | 30.0% | |
| TGACTAAAAAGACATGTTCA+TGG | - | chr4.1:75910143-75910162 | None:intergenic | 30.0% | |
| TGACTTTATGATGCTTACAT+TGG | + | chr4.1:75911233-75911252 | MS.gene87512:intron | 30.0% | |
| TGCAATATTCTTTGTATCAG+TGG | - | chr4.1:75910982-75911001 | None:intergenic | 30.0% | |
| TGTGATAGAGAAAACAAATG+TGG | + | chr4.1:75908169-75908188 | MS.gene87512:CDS | 30.0% | |
| TGTTTATTCCTGCAAGAAAT+TGG | + | chr4.1:75910833-75910852 | MS.gene87512:CDS | 30.0% | |
| TGTTTGGATTAACCATGATT+GGG | + | chr4.1:75908904-75908923 | MS.gene87512:intron | 30.0% | |
| TTAAATGTTAGTGTCATGTG+CGG | + | chr4.1:75906922-75906941 | MS.gene87512:intron | 30.0% | |
| TTCGATTACTATTAGTCAAC+TGG | + | chr4.1:75907520-75907539 | MS.gene87512:intron | 30.0% | |
| TTTATTCCTGCAAGAAATTG+GGG | + | chr4.1:75910835-75910854 | MS.gene87512:CDS | 30.0% | |
| ! | ATTAATATTGAAGGCGTACA+TGG | + | chr4.1:75906823-75906842 | MS.gene87512:intron | 30.0% |
| ! | CATTTTTCTTACGTAGTAGT+TGG | - | chr4.1:75907790-75907809 | None:intergenic | 30.0% |
| ! | CTCTTATTTGATGAAGGAAT+TGG | + | chr4.1:75908728-75908747 | MS.gene87512:intron | 30.0% |
| ! | TCAATTTTGTGATCTTGTGT+AGG | + | chr4.1:75910794-75910813 | MS.gene87512:intron | 30.0% |
| ! | TTATCTAGATACATGGACTA+AGG | + | chr4.1:75910193-75910212 | MS.gene87512:intron | 30.0% |
| ! | TTCTTCCTCTTATTTGATGA+AGG | + | chr4.1:75908722-75908741 | MS.gene87512:intron | 30.0% |
| !! | ATTTAATTAGCTTGTCCTAC+AGG | - | chr4.1:75910359-75910378 | None:intergenic | 30.0% |
| !!! | TTGTTTTGTTTTTCACTTGC+AGG | + | chr4.1:75906731-75906750 | MS.gene87512:intron | 30.0% |
| AAACGTAGGATTCACTTTAG+TGG | + | chr4.1:75907941-75907960 | MS.gene87512:intron | 35.0% | |
| AAGTTTGTGGATCCTAAAAC+TGG | + | chr4.1:75909670-75909689 | MS.gene87512:intron | 35.0% | |
| ACCTGACAATAAAAGACAGT+AGG | - | chr4.1:75911267-75911286 | None:intergenic | 35.0% | |
| AGAGATTGTAAAACTGACCT+GGG | - | chr4.1:75908292-75908311 | None:intergenic | 35.0% | |
| ATGCGACTTAAATGTACCTT+TGG | - | chr4.1:75908809-75908828 | None:intergenic | 35.0% | |
| ATTCCAGTTTCTACAAAGGT+GGG | + | chr4.1:75909581-75909600 | MS.gene87512:intron | 35.0% | |
| CAAACAAAGGTCAATGTCAA+TGG | + | chr4.1:75910864-75910883 | MS.gene87512:CDS | 35.0% | |
| CACATGATATTTCATTGGCA+TGG | + | chr4.1:75908335-75908354 | MS.gene87512:intron | 35.0% | |
| CACCAAACAAGACAAAAACA+CGG | - | chr4.1:75907089-75907108 | None:intergenic | 35.0% | |
| CAGCGTATGAATAAGAGATA+AGG | + | chr4.1:75909119-75909138 | MS.gene87512:intron | 35.0% | |
| CAGGATTTATTAATTGTGGC+TGG | + | chr4.1:75907829-75907848 | MS.gene87512:intron | 35.0% | |
| CGTATGAATAAGAGATAAGG+TGG | + | chr4.1:75909122-75909141 | MS.gene87512:intron | 35.0% | |
| CTAATTCGATAGGAAAAGCT+AGG | + | chr4.1:75910512-75910531 | MS.gene87512:intron | 35.0% | |
| CTACCAAATTTGTGTTTGGT+CGG | - | chr4.1:75909735-75909754 | None:intergenic | 35.0% | |
| GAATAGACTATGGTTGTGTT+TGG | + | chr4.1:75908888-75908907 | MS.gene87512:intron | 35.0% | |
| GACAACAAAGTGGTTGTTAT+AGG | - | chr4.1:75907626-75907645 | None:intergenic | 35.0% | |
| GACTAAGGAATTAGATACCT+GGG | + | chr4.1:75910229-75910248 | MS.gene87512:intron | 35.0% | |
| GAGATAGATACACACATTGA+AGG | + | chr4.1:75906964-75906983 | MS.gene87512:intron | 35.0% | |
| GATTAGGCCAAAACATTACA+AGG | - | chr4.1:75908702-75908721 | None:intergenic | 35.0% | |
| GCTCATGAATAAGGAATCAT+AGG | - | chr4.1:75908138-75908157 | None:intergenic | 35.0% | |
| GGACATATTCACAAGGTATA+AGG | - | chr4.1:75909897-75909916 | None:intergenic | 35.0% | |
| GTGTTTGGATTAACCATGAT+TGG | + | chr4.1:75908903-75908922 | MS.gene87512:intron | 35.0% | |
| TACCTGAAGATTCCAAGAAT+AGG | - | chr4.1:75910020-75910039 | None:intergenic | 35.0% | |
| TAGAGATTGTAAAACTGACC+TGG | - | chr4.1:75908293-75908312 | None:intergenic | 35.0% | |
| TAGTTAACTCCTCAAAACGT+AGG | + | chr4.1:75907927-75907946 | MS.gene87512:intron | 35.0% | |
| TATCCGACCAAACACAAATT+TGG | + | chr4.1:75909729-75909748 | MS.gene87512:CDS | 35.0% | |
| TGACACAAGATAGTATTTCG+GGG | + | chr4.1:75908768-75908787 | MS.gene87512:CDS | 35.0% | |
| TGCGACTTAAATGTACCTTT+GGG | - | chr4.1:75908808-75908827 | None:intergenic | 35.0% | |
| TTCCATAAAACTCCCAATCA+TGG | - | chr4.1:75908919-75908938 | None:intergenic | 35.0% | |
| TTCCTATTCTTGGAATCTTC+AGG | + | chr4.1:75910015-75910034 | MS.gene87512:CDS | 35.0% | |
| TTCTCAGAAGTTATTCCCAT+AGG | - | chr4.1:75909367-75909386 | None:intergenic | 35.0% | |
| ! | AAAGTGAATCCTACGTTTTG+AGG | - | chr4.1:75907939-75907958 | None:intergenic | 35.0% |
| ! | AACCATGATTGGGAGTTTTA+TGG | + | chr4.1:75908914-75908933 | MS.gene87512:intron | 35.0% |
| ! | ATAGTTGTAGGCACAGTTTT+AGG | + | chr4.1:75908212-75908231 | MS.gene87512:CDS | 35.0% |
| ! | CATAAAACCGTTTTCCTCAA+AGG | - | chr4.1:75907976-75907995 | None:intergenic | 35.0% |
| ! | GGACTAAGGTATCTAATACA+TGG | + | chr4.1:75910207-75910226 | MS.gene87512:intron | 35.0% |
| ! | GGTATCTAATACATGGACTA+AGG | + | chr4.1:75910214-75910233 | MS.gene87512:intron | 35.0% |
| ! | TACGATGACCACATCATTTT+CGG | - | chr4.1:75906790-75906809 | None:intergenic | 35.0% |
| ! | TCCTACTGTCTTTTATTGTC+AGG | + | chr4.1:75911263-75911282 | MS.gene87512:intron | 35.0% |
| ! | TTGCTGCTTACATAAAAGCT+GGG | + | chr4.1:75908619-75908638 | MS.gene87512:CDS | 35.0% |
| ! | TTTGGAGAGGAATTTAGAGT+GGG | + | chr4.1:75909167-75909186 | MS.gene87512:intron | 35.0% |
| !! | ATTACTGTTTCTGTTGACGA+TGG | + | chr4.1:75909706-75909725 | MS.gene87512:CDS | 35.0% |
| !! | CTAGCTTTTCCTATCGAATT+AGG | - | chr4.1:75910514-75910533 | None:intergenic | 35.0% |
| !! | GAGGAAAACGGTTTTATGTT+TGG | + | chr4.1:75907978-75907997 | MS.gene87512:intron | 35.0% |
| !! | GCATTTGCTGTTCTAACAAT+TGG | + | chr4.1:75907729-75907748 | MS.gene87512:intron | 35.0% |
| !! | TTTTGGAGAGGAATTTAGAG+TGG | + | chr4.1:75909166-75909185 | MS.gene87512:intron | 35.0% |
| AAAACAGGCGTCTAGATGTA+GGG | + | chr4.1:75910282-75910301 | MS.gene87512:intron | 40.0% | |
| AAAACTTACAGAGAGGTGAG+TGG | - | chr4.1:75906651-75906670 | None:intergenic | 40.0% | |
| AAAGCTGGGTTCTATGACAT+TGG | + | chr4.1:75908633-75908652 | MS.gene87512:CDS | 40.0% | |
| AAGAGCAATTGAGTGCAGAA+TGG | + | chr4.1:75908247-75908266 | MS.gene87512:CDS | 40.0% | |
| AAGCCTGCATTCAAAAAGGA+TGG | + | chr4.1:75909769-75909788 | MS.gene87512:CDS | 40.0% | |
| AAGGAATGCAGGCTACATAT+GGG | - | chr4.1:75909878-75909897 | None:intergenic | 40.0% | |
| AATAGCAGTACGATATGCAC+TGG | - | chr4.1:75907426-75907445 | None:intergenic | 40.0% | |
| AATGCTAGCCAAGTTAGTGA+TGG | + | chr4.1:75909942-75909961 | MS.gene87512:CDS | 40.0% | |
| AATGTGGAACCAAGTGAAGT+AGG | + | chr4.1:75908185-75908204 | MS.gene87512:CDS | 40.0% | |
| ACAAAGGTCAATGTCAATGG+TGG | + | chr4.1:75910867-75910886 | MS.gene87512:CDS | 40.0% | |
| ACAACTGCAGGTAATCAAGA+AGG | + | chr4.1:75909796-75909815 | MS.gene87512:intron | 40.0% | |
| ATTGGGGCTTGATCAAACAA+AGG | + | chr4.1:75910851-75910870 | MS.gene87512:CDS | 40.0% | |
| CACAGTCTCTGCTTGAAAAT+TGG | - | chr4.1:75908544-75908563 | None:intergenic | 40.0% | |
| CATTCCAGTTTCTACAAAGG+TGG | + | chr4.1:75909580-75909599 | MS.gene87512:intron | 40.0% | |
| CTACAGAGAGCTCATGAATA+AGG | - | chr4.1:75908147-75908166 | None:intergenic | 40.0% | |
| CTATTTGCAAAGCAAAGCGT+GGG | + | chr4.1:75907441-75907460 | MS.gene87512:CDS | 40.0% | |
| CTTATTCATGAGCTCTCTGT+AGG | + | chr4.1:75908145-75908164 | MS.gene87512:intron | 40.0% | |
| GACACAAGATAGTATTTCGG+GGG | + | chr4.1:75908769-75908788 | MS.gene87512:CDS | 40.0% | |
| GGACTAAGGAATTAGATACC+TGG | + | chr4.1:75910228-75910247 | MS.gene87512:intron | 40.0% | |
| GGTGTAATCTCGATGTGTAT+AGG | + | chr4.1:75911347-75911366 | MS.gene87512:CDS | 40.0% | |
| GTCAATAGACAATGTTCGTC+CGG | + | chr4.1:75908576-75908595 | MS.gene87512:CDS | 40.0% | |
| TAAAACAGGCGTCTAGATGT+AGG | + | chr4.1:75910281-75910300 | MS.gene87512:intron | 40.0% | |
| TAAACAGAGCACAAGGAACT+TGG | - | chr4.1:75909847-75909866 | None:intergenic | 40.0% | |
| TAAAGGATGTCCAAAAGCCA+TGG | - | chr4.1:75910895-75910914 | None:intergenic | 40.0% | |
| TAAGGAATGCAGGCTACATA+TGG | - | chr4.1:75909879-75909898 | None:intergenic | 40.0% | |
| TATTTGCAAAGCAAAGCGTG+GGG | + | chr4.1:75907442-75907461 | MS.gene87512:CDS | 40.0% | |
| TCAATTGCTCTTTCTGATCC+TGG | - | chr4.1:75908239-75908258 | None:intergenic | 40.0% | |
| TCACAAGGTATAAGGAATGC+AGG | - | chr4.1:75909889-75909908 | None:intergenic | 40.0% | |
| TCGAAGTTAAACAGAGCACA+AGG | - | chr4.1:75909854-75909873 | None:intergenic | 40.0% | |
| TCTTTCGGAAACATGCATAG+TGG | - | chr4.1:75911009-75911028 | None:intergenic | 40.0% | |
| TGTCTATTGACAGTTCGAAG+CGG | - | chr4.1:75908567-75908586 | None:intergenic | 40.0% | |
| TTAGAGGGGACATATTCACA+AGG | - | chr4.1:75909904-75909923 | None:intergenic | 40.0% | |
| TTCTTGATTACCTGCAGTTG+TGG | - | chr4.1:75909797-75909816 | None:intergenic | 40.0% | |
| ! | AACGTGTCCTTTGAGGAAAA+CGG | + | chr4.1:75907966-75907985 | MS.gene87512:intron | 40.0% |
| ! | ACTGGTGTTGAGTATAGTGT+AGG | + | chr4.1:75907538-75907557 | MS.gene87512:intron | 40.0% |
| ! | AGAAGTGTGGCTGTACAAAA+GGG | + | chr4.1:75909990-75910009 | MS.gene87512:CDS | 40.0% |
| ! | AGAATGGCTGCATTTTATGC+TGG | + | chr4.1:75908263-75908282 | MS.gene87512:CDS | 40.0% |
| ! | ATGGCTTTTGGACATCCTTT+AGG | + | chr4.1:75910894-75910913 | MS.gene87512:CDS | 40.0% |
| ! | ATTTAGAGTGGGAGAGAACT+AGG | + | chr4.1:75909178-75909197 | MS.gene87512:intron | 40.0% |
| ! | GGATTAGTGAGTGCTATCTT+TGG | + | chr4.1:75909143-75909162 | MS.gene87512:intron | 40.0% |
| ! | GTTCCATCCTTTTTGAATGC+AGG | - | chr4.1:75909775-75909794 | None:intergenic | 40.0% |
| ! | GTTGCTGCTTACATAAAAGC+TGG | + | chr4.1:75908618-75908637 | MS.gene87512:CDS | 40.0% |
| ! | TGTTTCTCCTCTCCAGTTTT+AGG | - | chr4.1:75909685-75909704 | None:intergenic | 40.0% |
| !! | GTCCGTGTTTTTGTCTTGTT+TGG | + | chr4.1:75907084-75907103 | MS.gene87512:intron | 40.0% |
| !! | GTGAGTGCTATCTTTGGTTT+TGG | + | chr4.1:75909149-75909168 | MS.gene87512:intron | 40.0% |
| !!! | GTCATGGCCTTGTAATGTTT+TGG | + | chr4.1:75908692-75908711 | MS.gene87512:intron | 40.0% |
| !!! | TGCTATCTTTGGTTTTGGAG+AGG | + | chr4.1:75909154-75909173 | MS.gene87512:intron | 40.0% |
| ACTATGTCGCCTACTTCACT+TGG | - | chr4.1:75908197-75908216 | None:intergenic | 45.0% | |
| ACTGAGGCAAGTAGATCATC+TGG | - | chr4.1:75907485-75907504 | None:intergenic | 45.0% | |
| ACTTTACCTGTGGCACCTAA+AGG | - | chr4.1:75910912-75910931 | None:intergenic | 45.0% | |
| AGGTGGATCCGAAAATGATG+TGG | + | chr4.1:75906779-75906798 | MS.gene87512:CDS | 45.0% | |
| AGTCGTTACCTTGAGAACTG+AGG | - | chr4.1:75907501-75907520 | None:intergenic | 45.0% | |
| AGTGGTTAACGTGTCCTTTG+AGG | + | chr4.1:75907959-75907978 | MS.gene87512:intron | 45.0% | |
| ATCAAGCCCCAATTTCTTGC+AGG | - | chr4.1:75910844-75910863 | None:intergenic | 45.0% | |
| ATCAGCAACTGCTTGAAGTC+CGG | - | chr4.1:75908598-75908617 | None:intergenic | 45.0% | |
| ATTTCATGCTTACAGCAGCC+TGG | - | chr4.1:75909429-75909448 | None:intergenic | 45.0% | |
| ATTTGCAAAGCAAAGCGTGG+GGG | + | chr4.1:75907443-75907462 | MS.gene87512:CDS | 45.0% | |
| CAAAAGGGGCTTCCTATTCT+TGG | + | chr4.1:75910005-75910024 | MS.gene87512:CDS | 45.0% | |
| CACCAAATTTGGCATCCTGT+AGG | + | chr4.1:75910341-75910360 | MS.gene87512:intron | 45.0% | |
| CATAGGAAGAAGACAGTCAC+GGG | - | chr4.1:75909350-75909369 | None:intergenic | 45.0% | |
| CCATAGGAAGAAGACAGTCA+CGG | - | chr4.1:75909351-75909370 | None:intergenic | 45.0% | |
| CGACGCTAACACATGTAGTT+AGG | + | chr4.1:75907024-75907043 | MS.gene87512:intron | 45.0% | |
| CGTGACTGTCTTCTTCCTAT+GGG | + | chr4.1:75909349-75909368 | MS.gene87512:CDS | 45.0% | |
| CTAGTTGTCGTGTTCGTGTT+TGG | + | chr4.1:75907252-75907271 | MS.gene87512:intron | 45.0% | |
| GAAATTAGGTCGAGTCTCAC+AGG | + | chr4.1:75909513-75909532 | MS.gene87512:intron | 45.0% | |
| GAACCCACCTTTGTAGAAAC+TGG | - | chr4.1:75909587-75909606 | None:intergenic | 45.0% | |
| GAAGTAGGCGACATAGTTGT+AGG | + | chr4.1:75908200-75908219 | MS.gene87512:CDS | 45.0% | |
| GAAGTGTGGCTGTACAAAAG+GGG | + | chr4.1:75909991-75910010 | MS.gene87512:CDS | 45.0% | |
| GAGAATGTTGCACAGCGTTA+CGG | + | chr4.1:75909382-75909401 | MS.gene87512:CDS | 45.0% | |
| GCTATTTGCAAAGCAAAGCG+TGG | + | chr4.1:75907440-75907459 | MS.gene87512:CDS | 45.0% | |
| GCTGAAGCCTGCATTCAAAA+AGG | + | chr4.1:75909765-75909784 | MS.gene87512:CDS | 45.0% | |
| GCTTCTCATGAAGAGAAGTG+TGG | + | chr4.1:75909977-75909996 | MS.gene87512:CDS | 45.0% | |
| GGTTCGCAAAACTAACCCAA+AGG | + | chr4.1:75908790-75908809 | MS.gene87512:CDS | 45.0% | |
| GTATGATGTTTGACACACGC+CGG | + | chr4.1:75906990-75907009 | MS.gene87512:intron | 45.0% | |
| GTCCTACAGGATGCCAAATT+TGG | - | chr4.1:75910346-75910365 | None:intergenic | 45.0% | |
| TCTACTTGCCTCAGTTCTCA+AGG | + | chr4.1:75907490-75907509 | MS.gene87512:CDS | 45.0% | |
| TCTTACGTAGTAGTTGGCAG+TGG | - | chr4.1:75907784-75907803 | None:intergenic | 45.0% | |
| TGTGGATCCTAAAACTGGAG+AGG | + | chr4.1:75909675-75909694 | MS.gene87512:CDS | 45.0% | |
| TTTGATGAAGGAATTGGGGC+TGG | + | chr4.1:75908734-75908753 | MS.gene87512:intron | 45.0% | |
| ! | GAGAAGTGTGGCTGTACAAA+AGG | + | chr4.1:75909989-75910008 | MS.gene87512:CDS | 45.0% |
| ! | TGTAGGAGTTTTGCTGCTGT+TGG | + | chr4.1:75910599-75910618 | MS.gene87512:intron | 45.0% |
| !! | GTTTGGTGTTCAACACATGC+CGG | + | chr4.1:75907159-75907178 | MS.gene87512:intron | 45.0% |
| !! | TTGAATGAGATGAAGCGTCG+TGG | + | chr4.1:75911308-75911327 | MS.gene87512:CDS | 45.0% |
| !!! | GCATTTTATGCTGGTTTCCC+AGG | + | chr4.1:75908272-75908291 | MS.gene87512:CDS | 45.0% |
| !! | TAATATTATTAATTATATAC+AGG | + | chr4.1:75910388-75910407 | MS.gene87512:intron | 5.0% |
| !! | TAATTCAAATAAAATATATA+TGG | - | chr4.1:75907229-75907248 | None:intergenic | 5.0% |
| AAGGATGGAACCACAACTGC+AGG | + | chr4.1:75909784-75909803 | MS.gene87512:CDS | 50.0% | |
| AGCGTCGTGGCAAAGATTGT+CGG | + | chr4.1:75911321-75911340 | MS.gene87512:CDS | 50.0% | |
| CAGCGTCGTGTTAGTGAAAC+CGG | - | chr4.1:75907181-75907200 | None:intergenic | 50.0% | |
| CAGGCTTCATTCTGTTCTGC+TGG | + | chr4.1:75906750-75906769 | MS.gene87512:intron | 50.0% | |
| CCGTGACTGTCTTCTTCCTA+TGG | + | chr4.1:75909348-75909367 | MS.gene87512:CDS | 50.0% | |
| CCTACGTCTCGACAACAAAG+TGG | - | chr4.1:75907636-75907655 | None:intergenic | 50.0% | |
| CTGCTGCACCATCACTAACT+TGG | - | chr4.1:75909953-75909972 | None:intergenic | 50.0% | |
| GCAGCTGGAATAGCAAAAGC+TGG | - | chr4.1:75910653-75910672 | None:intergenic | 50.0% | |
| GCGTCTAGATGTAGGGACTA+GGG | + | chr4.1:75910289-75910308 | MS.gene87512:intron | 50.0% | |
| GGTGTAGATCCTGCTGTCAT+GGG | + | chr4.1:75910620-75910639 | MS.gene87512:CDS | 50.0% | |
| TGAAGGAATTGGGGCTGGAT+TGG | + | chr4.1:75908739-75908758 | MS.gene87512:intron | 50.0% | |
| TGGTGTAGATCCTGCTGTCA+TGG | + | chr4.1:75910619-75910638 | MS.gene87512:CDS | 50.0% | |
| TTCTGTTCTGCTGGACAAGC+AGG | + | chr4.1:75906759-75906778 | MS.gene87512:CDS | 50.0% | |
| ! | AGTTAGTGATGGTGCAGCAG+CGG | + | chr4.1:75909953-75909972 | MS.gene87512:CDS | 50.0% |
| ! | CAATGTCAATGGTGGTGCCA+TGG | + | chr4.1:75910875-75910894 | MS.gene87512:CDS | 50.0% |
| ! | CCACTTTGTTGTCGAGACGT+AGG | + | chr4.1:75907633-75907652 | MS.gene87512:intron | 50.0% |
| ! | CGTGGCAAAGATTGTCGGTT+TGG | + | chr4.1:75911326-75911345 | MS.gene87512:CDS | 50.0% |
| !!! | AATGGTGGTGCCATGGCTTT+TGG | + | chr4.1:75910882-75910901 | MS.gene87512:CDS | 50.0% |
| !!! | GTAGGCACAGTTTTAGGACC+AGG | + | chr4.1:75908218-75908237 | MS.gene87512:CDS | 50.0% |
| ACAGTCACGGGCTTGTGCAA+AGG | - | chr4.1:75909338-75909357 | None:intergenic | 55.0% | |
| ACCAGATGCTGTTGCAGCTG+CGG | - | chr4.1:75909543-75909562 | None:intergenic | 55.0% | |
| AGCAAAGCGTGGGGGATTCA+AGG | + | chr4.1:75907451-75907470 | MS.gene87512:CDS | 55.0% | |
| CACAGCGTTACGGTGTGACA+AGG | + | chr4.1:75909392-75909411 | MS.gene87512:CDS | 55.0% | |
| CCAGCAGATTTCACTGCAGC+TGG | - | chr4.1:75910668-75910687 | None:intergenic | 55.0% | |
| CCAGCTGCAGTGAAATCTGC+TGG | + | chr4.1:75910665-75910684 | MS.gene87512:CDS | 55.0% | |
| GACAAGGCAGGAACAAGACC+AGG | + | chr4.1:75909408-75909427 | MS.gene87512:CDS | 55.0% | |
| GATCCTGCTGTCATGGGTGT+TGG | + | chr4.1:75910626-75910645 | MS.gene87512:CDS | 55.0% | |
| GGCGTCTAGATGTAGGGACT+AGG | + | chr4.1:75910288-75910307 | MS.gene87512:intron | 55.0% | |
| TAGCGTCGTGTCAGTGACAC+CGG | - | chr4.1:75907012-75907031 | None:intergenic | 55.0% | |
| TGTTCTGCTGGACAAGCAGG+TGG | + | chr4.1:75906762-75906781 | MS.gene87512:CDS | 55.0% | |
| ! | GGACATCCTTTAGGTGCCAC+AGG | + | chr4.1:75910903-75910922 | MS.gene87512:CDS | 55.0% |
| GCGTTACGGTGTGACAAGGC+AGG | + | chr4.1:75909396-75909415 | MS.gene87512:CDS | 60.0% | |
| GGACCAACACCCATGACAGC+AGG | - | chr4.1:75910632-75910651 | None:intergenic | 60.0% | |
| GCCGCAGCTGCAACAGCATC+TGG | + | chr4.1:75909539-75909558 | MS.gene87512:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 75906572 | 75911385 | 75906572 | ID=MS.gene87512 |
| chr4.1 | mRNA | 75906572 | 75911385 | 75906572 | ID=MS.gene87512.t1;Parent=MS.gene87512 |
| chr4.1 | exon | 75906572 | 75906661 | 75906572 | ID=MS.gene87512.t1.exon1;Parent=MS.gene87512.t1 |
| chr4.1 | CDS | 75906572 | 75906661 | 75906572 | ID=cds.MS.gene87512.t1;Parent=MS.gene87512.t1 |
| chr4.1 | exon | 75906753 | 75906811 | 75906753 | ID=MS.gene87512.t1.exon2;Parent=MS.gene87512.t1 |
| chr4.1 | CDS | 75906753 | 75906811 | 75906753 | ID=cds.MS.gene87512.t1;Parent=MS.gene87512.t1 |
| chr4.1 | exon | 75907427 | 75907511 | 75907427 | ID=MS.gene87512.t1.exon3;Parent=MS.gene87512.t1 |
| chr4.1 | CDS | 75907427 | 75907511 | 75907427 | ID=cds.MS.gene87512.t1;Parent=MS.gene87512.t1 |
| chr4.1 | exon | 75908167 | 75908293 | 75908167 | ID=MS.gene87512.t1.exon4;Parent=MS.gene87512.t1 |
| chr4.1 | CDS | 75908167 | 75908293 | 75908167 | ID=cds.MS.gene87512.t1;Parent=MS.gene87512.t1 |
| chr4.1 | exon | 75908556 | 75908654 | 75908556 | ID=MS.gene87512.t1.exon5;Parent=MS.gene87512.t1 |
| chr4.1 | CDS | 75908556 | 75908654 | 75908556 | ID=cds.MS.gene87512.t1;Parent=MS.gene87512.t1 |
| chr4.1 | exon | 75908744 | 75908811 | 75908744 | ID=MS.gene87512.t1.exon6;Parent=MS.gene87512.t1 |
| chr4.1 | CDS | 75908744 | 75908811 | 75908744 | ID=cds.MS.gene87512.t1;Parent=MS.gene87512.t1 |
| chr4.1 | exon | 75909328 | 75909435 | 75909328 | ID=MS.gene87512.t1.exon7;Parent=MS.gene87512.t1 |
| chr4.1 | CDS | 75909328 | 75909435 | 75909328 | ID=cds.MS.gene87512.t1;Parent=MS.gene87512.t1 |
| chr4.1 | exon | 75909521 | 75909598 | 75909521 | ID=MS.gene87512.t1.exon8;Parent=MS.gene87512.t1 |
| chr4.1 | CDS | 75909521 | 75909598 | 75909521 | ID=cds.MS.gene87512.t1;Parent=MS.gene87512.t1 |
| chr4.1 | exon | 75909673 | 75909805 | 75909673 | ID=MS.gene87512.t1.exon9;Parent=MS.gene87512.t1 |
| chr4.1 | CDS | 75909673 | 75909805 | 75909673 | ID=cds.MS.gene87512.t1;Parent=MS.gene87512.t1 |
| chr4.1 | exon | 75909940 | 75910036 | 75909940 | ID=MS.gene87512.t1.exon10;Parent=MS.gene87512.t1 |
| chr4.1 | CDS | 75909940 | 75910036 | 75909940 | ID=cds.MS.gene87512.t1;Parent=MS.gene87512.t1 |
| chr4.1 | exon | 75910604 | 75910727 | 75910604 | ID=MS.gene87512.t1.exon11;Parent=MS.gene87512.t1 |
| chr4.1 | CDS | 75910604 | 75910727 | 75910604 | ID=cds.MS.gene87512.t1;Parent=MS.gene87512.t1 |
| chr4.1 | exon | 75910816 | 75910924 | 75910816 | ID=MS.gene87512.t1.exon12;Parent=MS.gene87512.t1 |
| chr4.1 | CDS | 75910816 | 75910924 | 75910816 | ID=cds.MS.gene87512.t1;Parent=MS.gene87512.t1 |
| chr4.1 | exon | 75911285 | 75911385 | 75911285 | ID=MS.gene87512.t1.exon13;Parent=MS.gene87512.t1 |
| chr4.1 | CDS | 75911285 | 75911385 | 75911285 | ID=cds.MS.gene87512.t1;Parent=MS.gene87512.t1 |
| Gene Sequence |
| Protein sequence |
