Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87751.t1 | XP_003623564.1 | 85.1 | 316 | 11 | 1 | 1 | 280 | 1 | 316 | 4.90E-142 | 513.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87751.t1 | P22195 | 61.4 | 316 | 86 | 1 | 1 | 280 | 1 | 316 | 3.0e-100 | 366.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87751.t1 | G7KX22 | 85.1 | 316 | 11 | 1 | 1 | 280 | 1 | 316 | 3.5e-142 | 513.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051158 | MS.gene87751 | 0.806578 | 7.68E-50 | -1.69E-46 |
MS.gene053031 | MS.gene87751 | 0.804275 | 2.34E-49 | -1.69E-46 |
MS.gene053406 | MS.gene87751 | 0.837906 | 3.94E-57 | -1.69E-46 |
MS.gene054146 | MS.gene87751 | 0.808645 | 2.80E-50 | -1.69E-46 |
MS.gene054147 | MS.gene87751 | 0.803714 | 3.06E-49 | -1.69E-46 |
MS.gene054181 | MS.gene87751 | 0.826211 | 3.07E-54 | -1.69E-46 |
MS.gene055601 | MS.gene87751 | 0.813964 | 1.96E-51 | -1.69E-46 |
MS.gene056899 | MS.gene87751 | 0.808176 | 3.52E-50 | -1.69E-46 |
MS.gene058218 | MS.gene87751 | 0.83108 | 2.04E-55 | -1.69E-46 |
MS.gene059043 | MS.gene87751 | 0.802514 | 5.41E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87751.t1 | MTR_7g072480 | 85.127 | 316 | 11 | 1 | 1 | 280 | 1 | 316 | 0.0 | 533 |
MS.gene87751.t1 | MTR_7g072510 | 66.026 | 312 | 70 | 1 | 5 | 280 | 1 | 312 | 2.67e-147 | 415 |
MS.gene87751.t1 | MTR_4g029190 | 51.506 | 332 | 102 | 4 | 8 | 280 | 9 | 340 | 5.52e-111 | 324 |
MS.gene87751.t1 | MTR_4g029200 | 50.000 | 336 | 111 | 2 | 2 | 280 | 3 | 338 | 5.75e-109 | 319 |
MS.gene87751.t1 | MTR_1g115900 | 52.733 | 311 | 106 | 5 | 10 | 280 | 12 | 321 | 7.10e-105 | 308 |
MS.gene87751.t1 | MTR_5g083860 | 51.987 | 302 | 107 | 2 | 17 | 280 | 24 | 325 | 8.08e-104 | 305 |
MS.gene87751.t1 | MTR_2g084020 | 49.677 | 310 | 119 | 2 | 8 | 280 | 9 | 318 | 1.20e-103 | 305 |
MS.gene87751.t1 | MTR_3g094650 | 50.784 | 319 | 116 | 4 | 3 | 280 | 4 | 322 | 2.74e-103 | 304 |
MS.gene87751.t1 | MTR_3g466180 | 55.449 | 312 | 99 | 2 | 9 | 280 | 12 | 323 | 1.99e-102 | 301 |
MS.gene87751.t1 | MTR_3g466200 | 49.051 | 316 | 122 | 3 | 4 | 280 | 5 | 320 | 3.94e-100 | 296 |
MS.gene87751.t1 | MTR_2g084110 | 48.867 | 309 | 122 | 1 | 8 | 280 | 9 | 317 | 1.87e-99 | 294 |
MS.gene87751.t1 | MTR_2g084080 | 49.351 | 308 | 119 | 2 | 10 | 280 | 10 | 317 | 1.17e-98 | 292 |
MS.gene87751.t1 | MTR_2g084010 | 48.387 | 310 | 123 | 2 | 8 | 280 | 9 | 318 | 1.35e-98 | 292 |
MS.gene87751.t1 | MTR_5g074970 | 51.125 | 311 | 111 | 4 | 10 | 280 | 17 | 326 | 2.15e-96 | 286 |
MS.gene87751.t1 | MTR_2g084000 | 47.319 | 317 | 125 | 4 | 6 | 280 | 3 | 319 | 4.56e-95 | 283 |
MS.gene87751.t1 | MTR_3g094670 | 49.682 | 314 | 120 | 2 | 5 | 280 | 9 | 322 | 5.31e-95 | 283 |
MS.gene87751.t1 | MTR_4g029170 | 49.032 | 310 | 120 | 3 | 9 | 280 | 12 | 321 | 9.41e-94 | 280 |
MS.gene87751.t1 | MTR_2g084090 | 48.039 | 306 | 122 | 2 | 12 | 280 | 13 | 318 | 1.85e-93 | 279 |
MS.gene87751.t1 | MTR_3g072190 | 47.619 | 315 | 122 | 2 | 9 | 280 | 4 | 318 | 4.94e-93 | 278 |
MS.gene87751.t1 | MTR_4g083710 | 48.598 | 321 | 124 | 4 | 1 | 280 | 4 | 324 | 2.93e-92 | 276 |
MS.gene87751.t1 | MTR_7g026990 | 50.166 | 301 | 112 | 3 | 17 | 280 | 23 | 322 | 3.73e-92 | 276 |
MS.gene87751.t1 | MTR_3g094630 | 48.726 | 314 | 123 | 2 | 5 | 280 | 9 | 322 | 3.87e-91 | 273 |
MS.gene87751.t1 | MTR_3g072190 | 56.379 | 243 | 106 | 0 | 38 | 280 | 9 | 251 | 4.76e-91 | 270 |
MS.gene87751.t1 | MTR_4g074990 | 49.196 | 311 | 103 | 4 | 10 | 280 | 10 | 305 | 2.14e-90 | 270 |
MS.gene87751.t1 | MTR_4g029180 | 49.315 | 292 | 110 | 3 | 27 | 280 | 30 | 321 | 1.12e-88 | 266 |
MS.gene87751.t1 | MTR_7g072490 | 62.946 | 224 | 29 | 2 | 38 | 261 | 6 | 175 | 6.84e-88 | 261 |
MS.gene87751.t1 | MTR_4g074995 | 46.729 | 321 | 117 | 5 | 1 | 280 | 1 | 308 | 1.10e-86 | 261 |
MS.gene87751.t1 | MTR_5g074860 | 43.711 | 318 | 131 | 6 | 9 | 279 | 8 | 324 | 2.01e-81 | 248 |
MS.gene87751.t1 | MTR_4g074980 | 46.104 | 308 | 103 | 6 | 12 | 280 | 11 | 294 | 5.25e-80 | 244 |
MS.gene87751.t1 | MTR_5g017860 | 42.593 | 324 | 137 | 6 | 5 | 280 | 4 | 326 | 1.34e-79 | 244 |
MS.gene87751.t1 | MTR_5g074760 | 43.987 | 316 | 130 | 6 | 11 | 280 | 7 | 321 | 5.23e-79 | 242 |
MS.gene87751.t1 | MTR_5g074740 | 43.354 | 316 | 132 | 7 | 11 | 280 | 7 | 321 | 2.03e-77 | 238 |
MS.gene87751.t1 | MTR_5g017850 | 41.358 | 324 | 141 | 6 | 5 | 280 | 4 | 326 | 1.82e-76 | 236 |
MS.gene87751.t1 | MTR_5g021060 | 49.796 | 245 | 107 | 3 | 48 | 280 | 90 | 330 | 3.16e-76 | 235 |
MS.gene87751.t1 | MTR_4g122640 | 50.209 | 239 | 113 | 2 | 48 | 280 | 98 | 336 | 3.22e-76 | 235 |
MS.gene87751.t1 | MTR_5g074710 | 44.333 | 300 | 125 | 5 | 22 | 280 | 23 | 321 | 7.10e-76 | 234 |
MS.gene87751.t1 | MTR_8g076820 | 50.000 | 244 | 112 | 4 | 46 | 280 | 88 | 330 | 8.44e-76 | 234 |
MS.gene87751.t1 | MTR_4g125940 | 40.938 | 320 | 141 | 5 | 9 | 280 | 10 | 329 | 9.30e-75 | 231 |
MS.gene87751.t1 | MTR_5g014100 | 48.327 | 269 | 123 | 4 | 28 | 280 | 63 | 331 | 1.38e-74 | 231 |
MS.gene87751.t1 | MTR_3g467600 | 51.261 | 238 | 111 | 3 | 48 | 280 | 87 | 324 | 1.81e-74 | 231 |
MS.gene87751.t1 | MTR_2g040000 | 41.694 | 307 | 133 | 4 | 20 | 280 | 25 | 331 | 2.20e-74 | 231 |
MS.gene87751.t1 | MTR_2g029860 | 48.016 | 252 | 122 | 2 | 38 | 280 | 79 | 330 | 3.62e-73 | 228 |
MS.gene87751.t1 | MTR_2g029750 | 42.763 | 304 | 129 | 4 | 22 | 280 | 27 | 330 | 4.16e-73 | 228 |
MS.gene87751.t1 | MTR_4g074980 | 51.029 | 243 | 77 | 4 | 12 | 212 | 11 | 253 | 3.00e-72 | 223 |
MS.gene87751.t1 | MTR_1g022970 | 49.174 | 242 | 114 | 2 | 48 | 280 | 106 | 347 | 7.73e-72 | 224 |
MS.gene87751.t1 | MTR_4g125940 | 47.521 | 242 | 116 | 3 | 50 | 280 | 33 | 274 | 7.90e-71 | 219 |
MS.gene87751.t1 | MTR_2g028980 | 41.509 | 318 | 138 | 5 | 10 | 280 | 14 | 330 | 3.48e-70 | 221 |
MS.gene87751.t1 | MTR_2g029850 | 41.956 | 317 | 137 | 4 | 10 | 280 | 15 | 330 | 3.60e-70 | 220 |
MS.gene87751.t1 | MTR_7g093370 | 39.185 | 319 | 148 | 3 | 8 | 280 | 53 | 371 | 4.26e-70 | 221 |
MS.gene87751.t1 | MTR_5g049280 | 38.650 | 326 | 147 | 6 | 8 | 280 | 12 | 337 | 4.36e-70 | 220 |
MS.gene87751.t1 | MTR_2g029730 | 40.635 | 315 | 140 | 4 | 13 | 280 | 12 | 326 | 5.45e-70 | 220 |
MS.gene87751.t1 | MTR_2g029815 | 42.295 | 305 | 129 | 4 | 22 | 280 | 27 | 330 | 8.17e-70 | 219 |
MS.gene87751.t1 | MTR_2g029740 | 46.825 | 252 | 125 | 2 | 38 | 280 | 79 | 330 | 3.58e-69 | 218 |
MS.gene87751.t1 | MTR_2g029830 | 41.118 | 304 | 134 | 3 | 22 | 280 | 26 | 329 | 5.58e-69 | 218 |
MS.gene87751.t1 | MTR_2g029800 | 41.009 | 317 | 140 | 4 | 10 | 280 | 15 | 330 | 6.83e-69 | 217 |
MS.gene87751.t1 | MTR_1g054205 | 38.650 | 326 | 154 | 3 | 1 | 280 | 1 | 326 | 1.39e-68 | 216 |
MS.gene87751.t1 | MTR_2g029830 | 47.107 | 242 | 119 | 2 | 48 | 280 | 20 | 261 | 1.44e-68 | 214 |
MS.gene87751.t1 | MTR_2g029820 | 41.009 | 317 | 140 | 4 | 10 | 280 | 15 | 330 | 2.93e-67 | 213 |
MS.gene87751.t1 | MTR_2g029560 | 39.241 | 316 | 145 | 4 | 12 | 280 | 10 | 325 | 7.52e-67 | 212 |
MS.gene87751.t1 | MTR_2g029910 | 41.311 | 305 | 133 | 4 | 22 | 280 | 28 | 332 | 1.09e-65 | 209 |
MS.gene87751.t1 | MTR_2g008730 | 42.125 | 273 | 136 | 5 | 28 | 280 | 31 | 301 | 1.74e-62 | 199 |
MS.gene87751.t1 | MTR_3g092990 | 37.255 | 306 | 159 | 3 | 8 | 280 | 10 | 315 | 6.59e-62 | 198 |
MS.gene87751.t1 | MTR_2g008710 | 44.215 | 242 | 122 | 4 | 50 | 280 | 86 | 325 | 3.80e-61 | 196 |
MS.gene87751.t1 | MTR_5g074700 | 47.085 | 223 | 102 | 5 | 61 | 280 | 5 | 214 | 5.90e-61 | 192 |
MS.gene87751.t1 | MTR_0155s0040 | 38.206 | 301 | 144 | 6 | 17 | 280 | 20 | 315 | 1.67e-60 | 194 |
MS.gene87751.t1 | MTR_3g092990 | 36.190 | 315 | 157 | 3 | 10 | 280 | 12 | 326 | 2.95e-60 | 194 |
MS.gene87751.t1 | MTR_7g029030 | 34.700 | 317 | 168 | 4 | 3 | 280 | 4 | 320 | 1.05e-57 | 187 |
MS.gene87751.t1 | MTR_4g114210 | 34.579 | 321 | 163 | 5 | 5 | 280 | 2 | 320 | 2.03e-57 | 187 |
MS.gene87751.t1 | MTR_1g077000 | 36.223 | 323 | 156 | 7 | 3 | 280 | 10 | 327 | 1.05e-56 | 185 |
MS.gene87751.t1 | MTR_4g030890 | 41.200 | 250 | 137 | 3 | 38 | 280 | 150 | 396 | 3.76e-56 | 186 |
MS.gene87751.t1 | MTR_5g074860 | 36.164 | 318 | 116 | 7 | 9 | 279 | 8 | 285 | 3.89e-56 | 182 |
MS.gene87751.t1 | MTR_3g072210 | 52.973 | 185 | 85 | 2 | 98 | 280 | 54 | 238 | 7.82e-56 | 180 |
MS.gene87751.t1 | MTR_4g031140 | 40.400 | 250 | 139 | 3 | 38 | 280 | 78 | 324 | 6.55e-55 | 181 |
MS.gene87751.t1 | MTR_4g046713 | 33.648 | 318 | 166 | 5 | 7 | 280 | 10 | 326 | 1.34e-54 | 179 |
MS.gene87751.t1 | MTR_4g087965 | 42.678 | 239 | 127 | 4 | 48 | 276 | 104 | 342 | 1.65e-54 | 180 |
MS.gene87751.t1 | MTR_4g133800 | 38.776 | 245 | 138 | 4 | 44 | 280 | 93 | 333 | 9.52e-54 | 177 |
MS.gene87751.t1 | MTR_4g127670 | 44.105 | 229 | 117 | 5 | 62 | 280 | 96 | 323 | 1.00e-53 | 177 |
MS.gene87751.t1 | MTR_2g088770 | 33.968 | 315 | 163 | 6 | 10 | 280 | 12 | 325 | 1.12e-53 | 177 |
MS.gene87751.t1 | MTR_5g016010 | 41.964 | 224 | 121 | 2 | 62 | 276 | 102 | 325 | 5.96e-53 | 175 |
MS.gene87751.t1 | MTR_1g086320 | 41.564 | 243 | 129 | 4 | 50 | 280 | 92 | 333 | 1.42e-52 | 174 |
MS.gene87751.t1 | MTR_4g095450 | 37.097 | 310 | 143 | 8 | 14 | 276 | 16 | 320 | 1.43e-52 | 174 |
MS.gene87751.t1 | MTR_8g062780 | 34.675 | 323 | 164 | 6 | 5 | 280 | 2 | 324 | 1.41e-51 | 172 |
MS.gene87751.t1 | MTR_1g101830 | 33.968 | 315 | 159 | 6 | 10 | 280 | 13 | 322 | 2.14e-51 | 171 |
MS.gene87751.t1 | MTR_1g086490 | 41.365 | 249 | 128 | 4 | 50 | 280 | 92 | 340 | 1.48e-50 | 169 |
MS.gene87751.t1 | MTR_7g086820 | 39.496 | 238 | 134 | 5 | 48 | 280 | 80 | 312 | 3.47e-49 | 165 |
MS.gene87751.t1 | MTR_5g022870 | 34.365 | 323 | 162 | 8 | 1 | 280 | 1 | 316 | 4.09e-49 | 165 |
MS.gene87751.t1 | MTR_8g075100 | 35.333 | 300 | 145 | 5 | 24 | 280 | 26 | 319 | 4.91e-49 | 165 |
MS.gene87751.t1 | MTR_2g437770 | 37.959 | 245 | 139 | 5 | 44 | 280 | 102 | 341 | 8.46e-49 | 165 |
MS.gene87751.t1 | MTR_7g086870 | 40.086 | 232 | 134 | 4 | 50 | 280 | 84 | 311 | 8.88e-49 | 164 |
MS.gene87751.t1 | MTR_0286s0010 | 39.912 | 228 | 123 | 3 | 63 | 280 | 111 | 334 | 8.96e-49 | 165 |
MS.gene87751.t1 | MTR_6g008075 | 39.912 | 228 | 123 | 3 | 63 | 280 | 111 | 334 | 8.96e-49 | 165 |
MS.gene87751.t1 | MTR_1g009750 | 38.596 | 228 | 131 | 2 | 62 | 280 | 101 | 328 | 9.45e-49 | 164 |
MS.gene87751.t1 | MTR_2g008160 | 34.967 | 306 | 148 | 8 | 22 | 280 | 22 | 323 | 9.79e-49 | 164 |
MS.gene87751.t1 | MTR_1g025980 | 34.796 | 319 | 158 | 8 | 5 | 279 | 5 | 317 | 1.40e-48 | 164 |
MS.gene87751.t1 | MTR_1g038680 | 39.095 | 243 | 138 | 3 | 48 | 280 | 90 | 332 | 2.20e-48 | 164 |
MS.gene87751.t1 | MTR_2g067440 | 37.313 | 268 | 128 | 6 | 50 | 279 | 121 | 386 | 3.39e-48 | 165 |
MS.gene87751.t1 | MTR_1g090760 | 39.648 | 227 | 129 | 2 | 62 | 280 | 104 | 330 | 5.05e-48 | 163 |
MS.gene87751.t1 | MTR_6g027440 | 38.589 | 241 | 139 | 5 | 45 | 280 | 78 | 314 | 1.13e-47 | 161 |
MS.gene87751.t1 | MTR_2g077990 | 37.500 | 264 | 127 | 5 | 50 | 276 | 140 | 402 | 1.72e-47 | 163 |
MS.gene87751.t1 | MTR_6g043460 | 35.690 | 297 | 147 | 6 | 24 | 280 | 36 | 328 | 2.31e-47 | 161 |
MS.gene87751.t1 | MTR_6g043280 | 41.558 | 231 | 129 | 4 | 51 | 280 | 107 | 332 | 9.26e-47 | 159 |
MS.gene87751.t1 | MTR_0147s0010 | 37.349 | 249 | 128 | 4 | 58 | 279 | 134 | 381 | 3.20e-46 | 159 |
MS.gene87751.t1 | MTR_2g078610 | 36.742 | 264 | 129 | 5 | 50 | 276 | 140 | 402 | 8.55e-46 | 159 |
MS.gene87751.t1 | MTR_7g107520 | 31.847 | 314 | 166 | 6 | 11 | 280 | 11 | 320 | 4.38e-45 | 155 |
MS.gene87751.t1 | MTR_2g067450 | 38.174 | 241 | 133 | 6 | 50 | 279 | 74 | 309 | 7.31e-43 | 149 |
MS.gene87751.t1 | MTR_1g066710 | 30.333 | 300 | 167 | 4 | 22 | 280 | 25 | 323 | 7.55e-42 | 146 |
MS.gene87751.t1 | MTR_6g043240 | 40.553 | 217 | 124 | 4 | 66 | 280 | 118 | 331 | 7.97e-42 | 147 |
MS.gene87751.t1 | MTR_2g078280 | 36.220 | 254 | 124 | 5 | 50 | 266 | 140 | 392 | 2.86e-41 | 147 |
MS.gene87751.t1 | MTR_5g033470 | 36.777 | 242 | 142 | 4 | 50 | 280 | 136 | 377 | 9.34e-41 | 145 |
MS.gene87751.t1 | MTR_2g099175 | 33.745 | 243 | 146 | 4 | 50 | 280 | 96 | 335 | 2.63e-40 | 142 |
MS.gene87751.t1 | MTR_1g066380 | 32.271 | 251 | 160 | 3 | 35 | 280 | 10 | 255 | 3.14e-40 | 140 |
MS.gene87751.t1 | MTR_4g132490 | 29.630 | 324 | 181 | 5 | 3 | 280 | 5 | 327 | 1.32e-39 | 140 |
MS.gene87751.t1 | MTR_1g066380 | 32.271 | 251 | 160 | 3 | 35 | 280 | 78 | 323 | 1.50e-39 | 140 |
MS.gene87751.t1 | MTR_3g105790 | 33.607 | 244 | 143 | 3 | 51 | 280 | 8 | 246 | 2.12e-38 | 135 |
MS.gene87751.t1 | MTR_1g066640 | 32.669 | 251 | 159 | 3 | 35 | 280 | 78 | 323 | 2.12e-38 | 137 |
MS.gene87751.t1 | MTR_1g009750 | 32.119 | 302 | 175 | 5 | 8 | 280 | 11 | 311 | 4.72e-38 | 136 |
MS.gene87751.t1 | MTR_2g029880 | 41.053 | 190 | 93 | 4 | 100 | 280 | 9 | 188 | 6.88e-38 | 133 |
MS.gene87751.t1 | MTR_4g132110 | 31.174 | 247 | 160 | 3 | 35 | 276 | 83 | 324 | 9.13e-38 | 136 |
MS.gene87751.t1 | MTR_3g105790 | 33.607 | 244 | 143 | 3 | 51 | 280 | 84 | 322 | 9.69e-38 | 135 |
MS.gene87751.t1 | MTR_1g066680 | 28.763 | 299 | 172 | 4 | 22 | 280 | 25 | 322 | 7.32e-37 | 133 |
MS.gene87751.t1 | MTR_2g008160 | 32.000 | 300 | 130 | 8 | 22 | 280 | 22 | 288 | 9.63e-37 | 132 |
MS.gene87751.t1 | MTR_4g132110 | 30.556 | 252 | 160 | 4 | 35 | 276 | 83 | 329 | 2.27e-35 | 130 |
MS.gene87751.t1 | MTR_2g078560 | 32.883 | 222 | 111 | 5 | 93 | 276 | 95 | 316 | 9.42e-29 | 112 |
MS.gene87751.t1 | MTR_2g077980 | 31.159 | 276 | 144 | 9 | 50 | 280 | 11 | 285 | 1.87e-24 | 99.8 |
MS.gene87751.t1 | MTR_2g008160 | 35.882 | 170 | 73 | 3 | 22 | 157 | 22 | 189 | 4.79e-24 | 96.7 |
MS.gene87751.t1 | MTR_5g058120 | 37.662 | 154 | 92 | 2 | 123 | 276 | 6 | 155 | 7.88e-23 | 94.7 |
MS.gene87751.t1 | MTR_3g462850 | 39.716 | 141 | 73 | 4 | 152 | 280 | 9 | 149 | 1.46e-22 | 91.3 |
MS.gene87751.t1 | MTR_4g031040 | 34.118 | 170 | 69 | 4 | 48 | 214 | 2 | 131 | 1.74e-18 | 80.1 |
MS.gene87751.t1 | MTR_5g074770 | 40.206 | 97 | 55 | 2 | 185 | 279 | 13 | 108 | 2.29e-18 | 79.0 |
MS.gene87751.t1 | MTR_3g072260 | 40.909 | 110 | 29 | 1 | 23 | 96 | 25 | 134 | 5.38e-18 | 79.0 |
MS.gene87751.t1 | MTR_3g107060 | 29.577 | 213 | 96 | 6 | 61 | 263 | 146 | 314 | 1.54e-17 | 81.3 |
MS.gene87751.t1 | MTR_7g086790 | 41.509 | 106 | 58 | 2 | 49 | 154 | 31 | 132 | 1.79e-17 | 79.0 |
MS.gene87751.t1 | MTR_1g098320 | 44.595 | 74 | 41 | 0 | 203 | 276 | 47 | 120 | 6.30e-14 | 67.8 |
MS.gene87751.t1 | MTR_6g048160 | 61.111 | 54 | 19 | 2 | 44 | 96 | 35 | 87 | 1.62e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87751.t1 | AT5G05340 | 52.508 | 299 | 104 | 2 | 20 | 280 | 26 | 324 | 2.81e-103 | 304 |
MS.gene87751.t1 | AT5G58400 | 49.839 | 311 | 116 | 5 | 10 | 280 | 15 | 325 | 2.75e-94 | 281 |
MS.gene87751.t1 | AT5G58390 | 46.519 | 316 | 129 | 4 | 5 | 280 | 1 | 316 | 1.45e-89 | 269 |
MS.gene87751.t1 | AT1G14550 | 46.644 | 298 | 120 | 4 | 22 | 280 | 24 | 321 | 9.48e-84 | 254 |
MS.gene87751.t1 | AT4G36430 | 50.628 | 239 | 110 | 2 | 50 | 280 | 92 | 330 | 1.11e-80 | 247 |
MS.gene87751.t1 | AT2G18150 | 50.206 | 243 | 113 | 2 | 46 | 280 | 94 | 336 | 7.36e-80 | 245 |
MS.gene87751.t1 | AT1G14540 | 41.956 | 317 | 143 | 5 | 3 | 280 | 1 | 315 | 1.98e-78 | 240 |
MS.gene87751.t1 | AT2G18140 | 50.206 | 243 | 113 | 2 | 46 | 280 | 93 | 335 | 6.33e-77 | 237 |
MS.gene87751.t1 | AT2G38390 | 41.639 | 305 | 132 | 4 | 22 | 280 | 29 | 333 | 4.10e-74 | 230 |
MS.gene87751.t1 | AT5G66390 | 47.718 | 241 | 118 | 2 | 48 | 280 | 93 | 333 | 4.66e-74 | 230 |
MS.gene87751.t1 | AT3G50990 | 47.280 | 239 | 118 | 2 | 50 | 280 | 103 | 341 | 2.93e-72 | 226 |
MS.gene87751.t1 | AT5G06720 | 40.506 | 316 | 143 | 4 | 10 | 280 | 18 | 333 | 9.61e-72 | 224 |
MS.gene87751.t1 | AT1G44970 | 49.167 | 240 | 113 | 2 | 50 | 280 | 107 | 346 | 1.95e-71 | 223 |
MS.gene87751.t1 | AT4G08780 | 41.176 | 306 | 133 | 4 | 22 | 280 | 22 | 327 | 4.94e-71 | 223 |
MS.gene87751.t1 | AT5G06730 | 41.139 | 316 | 141 | 4 | 10 | 280 | 19 | 334 | 9.95e-71 | 222 |
MS.gene87751.t1 | AT3G32980 | 39.385 | 325 | 147 | 5 | 6 | 280 | 10 | 334 | 4.93e-70 | 220 |
MS.gene87751.t1 | AT2G35380 | 48.780 | 246 | 113 | 3 | 48 | 280 | 2 | 247 | 9.08e-70 | 216 |
MS.gene87751.t1 | AT4G16270 | 49.383 | 243 | 109 | 4 | 48 | 280 | 110 | 348 | 9.48e-70 | 219 |
MS.gene87751.t1 | AT4G08770 | 42.157 | 306 | 130 | 4 | 22 | 280 | 22 | 327 | 2.47e-69 | 218 |
MS.gene87751.t1 | AT2G35380 | 48.780 | 246 | 113 | 3 | 48 | 280 | 90 | 335 | 5.13e-69 | 217 |
MS.gene87751.t1 | AT2G38380 | 39.198 | 324 | 148 | 5 | 6 | 280 | 10 | 333 | 9.29e-68 | 214 |
MS.gene87751.t1 | AT1G68850 | 37.255 | 306 | 143 | 5 | 24 | 280 | 30 | 335 | 3.39e-67 | 212 |
MS.gene87751.t1 | AT5G19890 | 40.190 | 316 | 140 | 7 | 10 | 280 | 16 | 327 | 1.11e-66 | 211 |
MS.gene87751.t1 | AT3G49110 | 39.869 | 306 | 137 | 4 | 22 | 280 | 31 | 336 | 1.26e-66 | 211 |
MS.gene87751.t1 | AT3G49120 | 39.088 | 307 | 140 | 4 | 21 | 280 | 29 | 335 | 3.52e-65 | 207 |
MS.gene87751.t1 | AT1G49570 | 39.274 | 303 | 138 | 4 | 20 | 276 | 44 | 346 | 5.01e-63 | 202 |
MS.gene87751.t1 | AT5G19880 | 39.130 | 322 | 143 | 8 | 10 | 280 | 10 | 329 | 1.73e-60 | 195 |
MS.gene87751.t1 | AT5G15180 | 36.392 | 316 | 152 | 6 | 12 | 280 | 16 | 329 | 2.24e-59 | 192 |
MS.gene87751.t1 | AT4G33420 | 45.740 | 223 | 116 | 4 | 59 | 280 | 107 | 325 | 2.28e-59 | 192 |
MS.gene87751.t1 | AT5G14130 | 35.144 | 313 | 159 | 4 | 11 | 280 | 19 | 330 | 5.45e-59 | 191 |
MS.gene87751.t1 | AT4G33420 | 45.740 | 223 | 116 | 4 | 59 | 280 | 154 | 372 | 6.78e-59 | 192 |
MS.gene87751.t1 | AT5G14130 | 35.144 | 313 | 159 | 4 | 11 | 280 | 60 | 371 | 9.72e-59 | 192 |
MS.gene87751.t1 | AT5G64120 | 41.772 | 237 | 130 | 3 | 50 | 280 | 94 | 328 | 1.80e-58 | 189 |
MS.gene87751.t1 | AT2G22420 | 34.385 | 317 | 160 | 5 | 9 | 280 | 6 | 319 | 2.96e-58 | 189 |
MS.gene87751.t1 | AT5G40150 | 44.843 | 223 | 118 | 3 | 62 | 280 | 107 | 328 | 2.70e-57 | 187 |
MS.gene87751.t1 | AT3G01190 | 36.306 | 314 | 153 | 6 | 10 | 280 | 12 | 321 | 7.86e-57 | 185 |
MS.gene87751.t1 | AT5G17820 | 35.144 | 313 | 152 | 6 | 10 | 280 | 10 | 313 | 9.01e-57 | 185 |
MS.gene87751.t1 | AT4G30170 | 37.705 | 305 | 144 | 7 | 20 | 280 | 23 | 325 | 1.21e-56 | 185 |
MS.gene87751.t1 | AT5G67400 | 36.688 | 308 | 149 | 4 | 19 | 280 | 22 | 329 | 1.25e-56 | 185 |
MS.gene87751.t1 | AT3G28200 | 37.209 | 301 | 150 | 5 | 19 | 280 | 16 | 316 | 1.95e-56 | 184 |
MS.gene87751.t1 | AT5G17820 | 35.144 | 313 | 152 | 6 | 10 | 280 | 63 | 366 | 6.70e-56 | 184 |
MS.gene87751.t1 | AT2G18980 | 36.102 | 313 | 156 | 6 | 11 | 280 | 12 | 323 | 8.83e-56 | 182 |
MS.gene87751.t1 | AT1G05240 | 39.916 | 238 | 131 | 4 | 49 | 276 | 86 | 321 | 4.92e-55 | 181 |
MS.gene87751.t1 | AT1G05250 | 39.916 | 238 | 131 | 4 | 49 | 276 | 86 | 321 | 4.92e-55 | 181 |
MS.gene87751.t1 | AT3G03670 | 41.322 | 242 | 134 | 2 | 46 | 280 | 81 | 321 | 2.52e-54 | 179 |
MS.gene87751.t1 | AT5G39580 | 36.334 | 311 | 156 | 5 | 10 | 280 | 11 | 319 | 9.24e-54 | 177 |
MS.gene87751.t1 | AT4G37530 | 36.013 | 311 | 143 | 7 | 21 | 280 | 24 | 329 | 5.88e-53 | 176 |
MS.gene87751.t1 | AT4G11290 | 33.229 | 319 | 166 | 5 | 8 | 280 | 9 | 326 | 6.59e-53 | 175 |
MS.gene87751.t1 | AT1G30870 | 40.083 | 242 | 131 | 5 | 49 | 280 | 108 | 345 | 8.08e-53 | 176 |
MS.gene87751.t1 | AT1G71695 | 38.591 | 298 | 140 | 6 | 24 | 280 | 44 | 339 | 3.07e-52 | 174 |
MS.gene87751.t1 | AT3G49960 | 34.848 | 330 | 152 | 7 | 8 | 280 | 6 | 329 | 3.30e-52 | 174 |
MS.gene87751.t1 | AT2G41480 | 40.741 | 243 | 130 | 5 | 50 | 280 | 88 | 328 | 4.73e-52 | 173 |
MS.gene87751.t1 | AT5G51890 | 35.849 | 318 | 150 | 10 | 10 | 280 | 12 | 322 | 1.29e-51 | 172 |
MS.gene87751.t1 | AT4G33870 | 36.431 | 269 | 128 | 3 | 50 | 276 | 130 | 397 | 2.10e-51 | 173 |
MS.gene87751.t1 | AT1G05260 | 34.076 | 314 | 162 | 5 | 11 | 280 | 13 | 325 | 2.71e-51 | 171 |
MS.gene87751.t1 | AT5G64110 | 42.562 | 242 | 124 | 6 | 50 | 280 | 93 | 330 | 1.95e-50 | 169 |
MS.gene87751.t1 | AT4G37520 | 34.516 | 310 | 147 | 6 | 22 | 280 | 25 | 329 | 3.54e-50 | 168 |
MS.gene87751.t1 | AT1G34510 | 36.039 | 308 | 153 | 9 | 11 | 280 | 8 | 309 | 6.28e-50 | 167 |
MS.gene87751.t1 | AT1G77100 | 34.967 | 306 | 154 | 8 | 17 | 280 | 17 | 319 | 2.80e-49 | 166 |
MS.gene87751.t1 | AT4G37520 | 34.194 | 310 | 145 | 7 | 22 | 280 | 25 | 326 | 1.75e-48 | 164 |
MS.gene87751.t1 | AT4G26010 | 34.628 | 309 | 158 | 8 | 10 | 280 | 7 | 309 | 1.87e-48 | 163 |
MS.gene87751.t1 | AT5G47000 | 33.123 | 317 | 163 | 5 | 12 | 280 | 15 | 330 | 2.25e-48 | 164 |
MS.gene87751.t1 | AT4G26010 | 34.628 | 309 | 158 | 8 | 10 | 280 | 35 | 337 | 3.42e-48 | 163 |
MS.gene87751.t1 | AT4G17690 | 39.640 | 222 | 131 | 2 | 62 | 280 | 101 | 322 | 3.90e-48 | 163 |
MS.gene87751.t1 | AT3G21770 | 32.143 | 308 | 164 | 5 | 13 | 276 | 18 | 324 | 1.11e-47 | 162 |
MS.gene87751.t1 | AT1G24110 | 34.286 | 315 | 160 | 8 | 13 | 280 | 8 | 322 | 3.33e-47 | 160 |
MS.gene87751.t1 | AT4G31760 | 31.013 | 316 | 177 | 2 | 6 | 280 | 11 | 326 | 3.70e-47 | 160 |
MS.gene87751.t1 | AT2G34060 | 38.043 | 276 | 150 | 7 | 20 | 277 | 71 | 343 | 4.32e-47 | 160 |
MS.gene87751.t1 | AT5G64100 | 37.759 | 241 | 135 | 5 | 50 | 280 | 96 | 331 | 1.45e-45 | 156 |
MS.gene87751.t1 | AT4G25980 | 30.275 | 327 | 173 | 9 | 1 | 280 | 8 | 326 | 4.29e-45 | 155 |
MS.gene87751.t1 | AT2G39040 | 40.891 | 247 | 131 | 6 | 47 | 280 | 106 | 350 | 4.29e-45 | 155 |
MS.gene87751.t1 | AT5G42180 | 39.076 | 238 | 133 | 4 | 49 | 279 | 84 | 316 | 3.00e-44 | 152 |
MS.gene87751.t1 | AT2G24800 | 33.010 | 309 | 149 | 6 | 22 | 280 | 29 | 329 | 6.86e-44 | 152 |
MS.gene87751.t1 | AT4G37530 | 36.466 | 266 | 113 | 7 | 17 | 231 | 20 | 280 | 1.38e-42 | 147 |
MS.gene87751.t1 | AT2G37130 | 36.123 | 227 | 139 | 3 | 60 | 280 | 70 | 296 | 3.48e-39 | 139 |
MS.gene87751.t1 | AT2G37130 | 36.123 | 227 | 139 | 3 | 60 | 280 | 101 | 327 | 7.44e-39 | 139 |
MS.gene87751.t1 | AT5G24070 | 32.510 | 243 | 149 | 4 | 50 | 280 | 96 | 335 | 1.14e-36 | 133 |
MS.gene87751.t1 | AT4G21960 | 30.677 | 251 | 164 | 3 | 35 | 280 | 82 | 327 | 1.28e-36 | 133 |
MS.gene87751.t1 | AT2G43480 | 32.510 | 243 | 149 | 4 | 50 | 280 | 96 | 335 | 3.66e-36 | 132 |
MS.gene87751.t1 | AT5G22410 | 35.270 | 241 | 140 | 8 | 50 | 278 | 87 | 323 | 1.77e-35 | 130 |
MS.gene87751.t1 | AT3G17070 | 33.766 | 231 | 142 | 4 | 60 | 280 | 47 | 276 | 1.04e-33 | 124 |
MS.gene87751.t1 | AT3G17070 | 33.766 | 231 | 142 | 4 | 60 | 280 | 110 | 339 | 2.52e-33 | 124 |
MS.gene87751.t1 | AT5G39580 | 34.171 | 199 | 92 | 4 | 10 | 175 | 11 | 203 | 3.50e-23 | 95.5 |
MS.gene87751.t1 | AT2G24800 | 32.418 | 182 | 89 | 3 | 22 | 169 | 29 | 210 | 2.68e-19 | 85.1 |
MS.gene87751.t1 | AT4G25980 | 38.532 | 109 | 65 | 2 | 47 | 155 | 128 | 234 | 4.54e-19 | 85.1 |
MS.gene87751.t1 | AT1G77490 | 28.505 | 214 | 129 | 5 | 56 | 263 | 145 | 340 | 2.09e-15 | 76.3 |
MS.gene87751.t1 | AT1G77490 | 28.505 | 214 | 129 | 5 | 56 | 263 | 145 | 340 | 3.06e-15 | 75.5 |
MS.gene87751.t1 | AT4G32320 | 30.047 | 213 | 95 | 5 | 61 | 263 | 155 | 323 | 3.24e-15 | 75.1 |
MS.gene87751.t1 | AT3G42570 | 37.895 | 95 | 58 | 1 | 60 | 153 | 53 | 147 | 1.21e-14 | 70.1 |
Find 55 sgRNAs with CRISPR-Local
Find 123 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAATCAACTTTGAAGCTTAA+AGG | 0.176969 | 7.1:+29714060 | None:intergenic |
ATTTAAATCACCACCTGTTC+TGG | 0.201894 | 7.1:+29714230 | None:intergenic |
TCAGCACAAGAGACAGTATT+AGG | 0.244278 | 7.1:+29715304 | None:intergenic |
GCGAACCTTGGCCCACTTAC+TGG | 0.253067 | 7.1:-29714015 | MS.gene87751:CDS |
AGAGAAATGGTTGCTTTATC+AGG | 0.263605 | 7.1:-29714735 | MS.gene87751:intron |
TGCCAATGCAATGTTCAAAA+TGG | 0.285347 | 7.1:-29714037 | MS.gene87751:CDS |
AATCAACTTTGAAGCTTAAA+GGG | 0.314197 | 7.1:+29714061 | None:intergenic |
GAGCTGAAATTGTGCCAATA+AGG | 0.346550 | 7.1:+29716407 | None:intergenic |
ACCTAGTTGGACTGTTCAAT+TGG | 0.361958 | 7.1:-29714871 | MS.gene87751:CDS |
AAAATATGAACTTTGGTGAT+TGG | 0.370489 | 7.1:+29716442 | None:intergenic |
CCTCTCAGTGAATTTGCGTT+TGG | 0.374279 | 7.1:+29715373 | None:intergenic |
TGATAAAGCAACCATTTCTC+TGG | 0.394331 | 7.1:+29714737 | None:intergenic |
CAAGAACTTGCAAAACCAAA+AGG | 0.408404 | 7.1:-29714157 | MS.gene87751:CDS |
CAGAGTGAAAGAGACCCTTT+TGG | 0.418681 | 7.1:+29714142 | None:intergenic |
CGAACCTTGGCCCACTTACT+GGG | 0.440557 | 7.1:-29714014 | MS.gene87751:CDS |
CAGCACAAGAGACAGTATTA+GGG | 0.445413 | 7.1:+29715305 | None:intergenic |
TTTAAATCACCACCTGTTCT+GGG | 0.445460 | 7.1:+29714231 | None:intergenic |
AGGTTTCACACCCAGAGAAA+TGG | 0.454533 | 7.1:-29714748 | MS.gene87751:CDS |
ATTATAGGATCACACACAAT+TGG | 0.458297 | 7.1:-29714342 | MS.gene87751:intron |
TAAGCATTGTCAAATGTCTC+TGG | 0.458481 | 7.1:+29714183 | None:intergenic |
TGTTCTGAAGAATCTACAAC+TGG | 0.463346 | 7.1:+29714314 | None:intergenic |
CAATCAAGTTGTCCCAGAAC+AGG | 0.469147 | 7.1:-29714243 | MS.gene87751:CDS |
GGACTGTTCAATTGGGAAGA+AGG | 0.475208 | 7.1:-29714863 | MS.gene87751:CDS |
TTCAGCTTGGTGGACCTAGT+TGG | 0.477136 | 7.1:-29714884 | MS.gene87751:intron |
TTGAACATATTTCAGCTTGG+TGG | 0.483739 | 7.1:-29714894 | MS.gene87751:intron |
AACTCAGATTTACCTGGTCC+TGG | 0.486375 | 7.1:-29714810 | MS.gene87751:CDS |
GACTGTTCAATTGGGAAGAA+GGG | 0.500140 | 7.1:-29714862 | MS.gene87751:CDS |
TATGAACTTTGGTGATTGGA+AGG | 0.501423 | 7.1:+29716446 | None:intergenic |
AAAAGAAGTCATTTCTGCTG+TGG | 0.508271 | 7.1:-29716329 | MS.gene87751:CDS |
CCTAGTTGGACTGTTCAATT+GGG | 0.509550 | 7.1:-29714870 | MS.gene87751:CDS |
GAGTACGAAAATATGAACTT+TGG | 0.523744 | 7.1:+29716435 | None:intergenic |
TGACCACTAGACCCAGTAAG+TGG | 0.535787 | 7.1:+29714003 | None:intergenic |
AAGAACTTGCAAAACCAAAA+GGG | 0.543758 | 7.1:-29714156 | MS.gene87751:CDS |
AAAGAAGTCATTTCTGCTGT+GGG | 0.544149 | 7.1:-29716328 | MS.gene87751:intron |
ATGTTCAAAATGGCGAACCT+TGG | 0.559997 | 7.1:-29714027 | MS.gene87751:CDS |
CCCAATTGAACAGTCCAACT+AGG | 0.563776 | 7.1:+29714870 | None:intergenic |
AGCTAAACTAAAACTTGCTG+TGG | 0.567453 | 7.1:+29714833 | None:intergenic |
CTTAGATCAGAACCAGGACC+AGG | 0.571660 | 7.1:+29714798 | None:intergenic |
CACAAGTTAATTCTTACGCT+AGG | 0.574958 | 7.1:-29714086 | MS.gene87751:CDS |
TTAGCTAACTCAGATTTACC+TGG | 0.577184 | 7.1:-29714816 | MS.gene87751:CDS |
GGCCCACTTACTGGGTCTAG+TGG | 0.578170 | 7.1:-29714006 | MS.gene87751:CDS |
TTAATGGTTGAAAGCACAAG+TGG | 0.587684 | 7.1:+29716352 | None:intergenic |
GTTGTAGATTCTTCAGAACA+AGG | 0.591250 | 7.1:-29714311 | MS.gene87751:CDS |
GATAAAGCAACCATTTCTCT+GGG | 0.594650 | 7.1:+29714738 | None:intergenic |
GGTCCTGGTTCTGATCTAAG+TGG | 0.604228 | 7.1:-29714795 | MS.gene87751:CDS |
TAGACCCAGTAAGTGGGCCA+AGG | 0.625799 | 7.1:+29714010 | None:intergenic |
GTCAAATGTCTCTGGAGTGG+TGG | 0.637737 | 7.1:+29714191 | None:intergenic |
GACCACTAGACCCAGTAAGT+GGG | 0.650053 | 7.1:+29714004 | None:intergenic |
TGTAGCAGCAAGAGATTCCG+TGG | 0.650913 | 7.1:-29715272 | MS.gene87751:CDS |
TCAAGTTGTCCCAGAACAGG+TGG | 0.651110 | 7.1:-29714240 | MS.gene87751:CDS |
TCTGGAGTGGTGGTATCAAG+TGG | 0.673011 | 7.1:+29714201 | None:intergenic |
AGACCACTTAGATCAGAACC+AGG | 0.679668 | 7.1:+29714792 | None:intergenic |
ATATATACTTACAGCAACCA+CGG | 0.692119 | 7.1:+29715255 | None:intergenic |
ATTGTCAAATGTCTCTGGAG+TGG | 0.708738 | 7.1:+29714188 | None:intergenic |
CCAAACGCAAATTCACTGAG+AGG | 0.715771 | 7.1:-29715373 | MS.gene87751:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATATATATTTTTTTTTTTT+TGG | + | chr7.1:29714733-29714752 | None:intergenic | 0.0% |
!! | AAAAAAAAAAACTTTAATGT+TGG | - | chr7.1:29715313-29715332 | MS.gene87751:CDS | 10.0% |
!! | GAAAAAAAAAAAAAATTGAA+TGG | - | chr7.1:29714446-29714465 | MS.gene87751:intron | 10.0% |
!! | TTAATTTCTAAATAATATGT+AGG | - | chr7.1:29714282-29714301 | MS.gene87751:CDS | 10.0% |
!!! | AATAGAGATAATTATTTTTA+AGG | + | chr7.1:29714937-29714956 | None:intergenic | 10.0% |
!!! | TTTGAACAAAAAATTAATTT+TGG | - | chr7.1:29714669-29714688 | MS.gene87751:intron | 10.0% |
!! | AAAAAAAAAAAATTGAATGG+TGG | - | chr7.1:29714449-29714468 | MS.gene87751:intron | 15.0% |
!! | AACTAACTTTATTGTATTAT+AGG | - | chr7.1:29716066-29716085 | MS.gene87751:intron | 15.0% |
!! | GTTCAATATACAAATTATTT+CGG | + | chr7.1:29715515-29715534 | None:intergenic | 15.0% |
!! | TAAATATATAGATGCATATT+AGG | - | chr7.1:29715814-29715833 | MS.gene87751:intron | 15.0% |
!! | TAATAAATAAATCAACTAGT+TGG | + | chr7.1:29714790-29714809 | None:intergenic | 15.0% |
!! | TGAAAATAATGAATTTGTAT+TGG | - | chr7.1:29715861-29715880 | MS.gene87751:intron | 15.0% |
!! | TTTAGTTAAAATAATGTGTA+GGG | + | chr7.1:29714645-29714664 | None:intergenic | 15.0% |
!!! | AGATTTTACAGTTAAAAAAT+TGG | - | chr7.1:29715770-29715789 | MS.gene87751:intron | 15.0% |
!! | AAATACGTAATCTATACAAA+CGG | - | chr7.1:29715284-29715303 | MS.gene87751:CDS | 20.0% |
!! | ACCCTAGTAATAATAAAATT+AGG | + | chr7.1:29715976-29715995 | None:intergenic | 20.0% |
!! | CCCTAGTAATAATAAAATTA+GGG | + | chr7.1:29715975-29715994 | None:intergenic | 20.0% |
!! | CTTTAGTTAAAATAATGTGT+AGG | + | chr7.1:29714646-29714665 | None:intergenic | 20.0% |
!! | GTATAACTCTACTAAAAATT+TGG | + | chr7.1:29715397-29715416 | None:intergenic | 20.0% |
!! | TTAGTTAAAATAATGTGTAG+GGG | + | chr7.1:29714644-29714663 | None:intergenic | 20.0% |
!! | TTTAACTGTAAAATCTTTGT+TGG | + | chr7.1:29715766-29715785 | None:intergenic | 20.0% |
!!! | AATGCTCAAACATATTTTTT+AGG | - | chr7.1:29714323-29714342 | MS.gene87751:CDS | 20.0% |
!!! | ACCCTAATTTTATTATTACT+AGG | - | chr7.1:29715971-29715990 | MS.gene87751:intron | 20.0% |
!!! | AGAAATGACTTCTTTTTTAA+TGG | + | chr7.1:29714090-29714109 | None:intergenic | 20.0% |
!!! | ATCAATGCTTTTAACAATAA+AGG | - | chr7.1:29715655-29715674 | MS.gene87751:intron | 20.0% |
!!! | ATTTTGGCACTAAATAATAA+TGG | - | chr7.1:29714685-29714704 | MS.gene87751:intron | 20.0% |
!!! | CATACACGTTTTTTTTTTTA+GGG | - | chr7.1:29714966-29714985 | MS.gene87751:intron | 20.0% |
!!! | CCCTAATTTTATTATTACTA+GGG | - | chr7.1:29715972-29715991 | MS.gene87751:intron | 20.0% |
!!! | CGTAATAATTTTTAATTCGT+CGG | - | chr7.1:29715250-29715269 | MS.gene87751:intron | 20.0% |
!!! | GCATATTAGGATAATTTTAT+GGG | - | chr7.1:29715827-29715846 | MS.gene87751:intron | 20.0% |
!!! | TGCATATTAGGATAATTTTA+TGG | - | chr7.1:29715826-29715845 | MS.gene87751:intron | 20.0% |
!!! | TTTTATTATTACTAGGGTTT+AGG | - | chr7.1:29715978-29715997 | MS.gene87751:intron | 20.0% |
! | ATAATGGCTAAAACTAAAAG+TGG | - | chr7.1:29714701-29714720 | MS.gene87751:intron | 25.0% |
! | ATATTGAACATATTTCAGCT+TGG | - | chr7.1:29715526-29715545 | MS.gene87751:intron | 25.0% |
! | CCTAAAAAAAAAAACGTGTA+TGG | + | chr7.1:29714968-29714987 | None:intergenic | 25.0% |
! | GTCAAGTTAGAAAAAATTGT+AGG | - | chr7.1:29716439-29716458 | MS.gene87751:CDS | 25.0% |
! | TAGTCACAAAGTTTAGATTT+AGG | - | chr7.1:29715435-29715454 | MS.gene87751:intron | 25.0% |
! | TATTGTTTAATCCATATGCA+TGG | + | chr7.1:29714518-29714537 | None:intergenic | 25.0% |
! | TGATATGAAAACTGGATAAA+CGG | + | chr7.1:29716015-29716034 | None:intergenic | 25.0% |
!! | AAAATATGAACTTTGGTGAT+TGG | + | chr7.1:29713984-29714003 | None:intergenic | 25.0% |
!! | CAAGTCAAAACTTTTCTTTA+AGG | - | chr7.1:29715199-29715218 | MS.gene87751:intron | 25.0% |
!!! | AAATCAACTTTGAAGCTTAA+AGG | + | chr7.1:29716366-29716385 | None:intergenic | 25.0% |
!!! | AATCAACTTTGAAGCTTAAA+GGG | + | chr7.1:29716365-29716384 | None:intergenic | 25.0% |
!!! | AGAATTAACTTGTGATTTTG+TGG | + | chr7.1:29716331-29716350 | None:intergenic | 25.0% |
!!! | ATTTGTATAACTTTTGAGTG+AGG | - | chr7.1:29714412-29714431 | MS.gene87751:intron | 25.0% |
!!! | CCATACACGTTTTTTTTTTT+AGG | - | chr7.1:29714965-29714984 | MS.gene87751:intron | 25.0% |
AAGAACTTGCAAAACCAAAA+GGG | - | chr7.1:29716267-29716286 | MS.gene87751:intron | 30.0% | |
ATATATACTTACAGCAACCA+CGG | + | chr7.1:29715171-29715190 | None:intergenic | 30.0% | |
ATTAGGTCACTTAAATCAAG+AGG | + | chr7.1:29715732-29715751 | None:intergenic | 30.0% | |
ATTATAGGATCACACACAAT+TGG | - | chr7.1:29716081-29716100 | MS.gene87751:intron | 30.0% | |
CATAAAGAGAAAGAAGAGAA+AGG | + | chr7.1:29714195-29714214 | None:intergenic | 30.0% | |
GAGTACGAAAATATGAACTT+TGG | + | chr7.1:29713991-29714010 | None:intergenic | 30.0% | |
TGAGAATGAGACATGTTTAT+CGG | + | chr7.1:29716039-29716058 | None:intergenic | 30.0% | |
TTATCGGATGATATGAAAAC+TGG | + | chr7.1:29716023-29716042 | None:intergenic | 30.0% | |
TTGCTTGAACAAAACAATCA+TGG | + | chr7.1:29714163-29714182 | None:intergenic | 30.0% | |
TTTCTAATTAGTGTGTGCAT+GGG | + | chr7.1:29714387-29714406 | None:intergenic | 30.0% | |
!! | CGTTCTGAAGTAAAAATTAG+AGG | + | chr7.1:29714048-29714067 | None:intergenic | 30.0% |
AAAAGAAGTCATTTCTGCTG+TGG | - | chr7.1:29714094-29714113 | MS.gene87751:CDS | 35.0% | |
AAAGAAGTCATTTCTGCTGT+GGG | - | chr7.1:29714095-29714114 | MS.gene87751:CDS | 35.0% | |
AGAAAGAAGAGAAAGGTGAA+AGG | + | chr7.1:29714188-29714207 | None:intergenic | 35.0% | |
ATTTAAATCACCACCTGTTC+TGG | + | chr7.1:29716196-29716215 | None:intergenic | 35.0% | |
CAAGAACTTGCAAAACCAAA+AGG | - | chr7.1:29716266-29716285 | MS.gene87751:intron | 35.0% | |
CACAAGTTAATTCTTACGCT+AGG | - | chr7.1:29716337-29716356 | MS.gene87751:CDS | 35.0% | |
GATAAAGCAACCATTTCTCT+GGG | + | chr7.1:29715688-29715707 | None:intergenic | 35.0% | |
GTAGAGTTATACACAAGAGA+AGG | - | chr7.1:29715405-29715424 | MS.gene87751:intron | 35.0% | |
GTTGTAGATTCTTCAGAACA+AGG | - | chr7.1:29716112-29716131 | MS.gene87751:intron | 35.0% | |
GTTTAATCCATATGCATGGA+CGG | + | chr7.1:29714514-29714533 | None:intergenic | 35.0% | |
GTTTCTAATTAGTGTGTGCA+TGG | + | chr7.1:29714388-29714407 | None:intergenic | 35.0% | |
TGATAAAGCAACCATTTCTC+TGG | + | chr7.1:29715689-29715708 | None:intergenic | 35.0% | |
TGCCAATGCAATGTTCAAAA+TGG | - | chr7.1:29716386-29716405 | MS.gene87751:CDS | 35.0% | |
TGTTGGAGAAAGCAGTAATT+AGG | + | chr7.1:29715749-29715768 | None:intergenic | 35.0% | |
TTAGCTAACTCAGATTTACC+TGG | - | chr7.1:29715607-29715626 | MS.gene87751:intron | 35.0% | |
TTGAACATATTTCAGCTTGG+TGG | - | chr7.1:29715529-29715548 | MS.gene87751:intron | 35.0% | |
TTGTGATGCATCAGTACTAT+TGG | - | chr7.1:29714989-29715008 | MS.gene87751:intron | 35.0% | |
TTTAAATCACCACCTGTTCT+GGG | + | chr7.1:29716195-29716214 | None:intergenic | 35.0% | |
! | AGAGAAATGGTTGCTTTATC+AGG | - | chr7.1:29715688-29715707 | MS.gene87751:intron | 35.0% |
! | TAAGCATTGTCAAATGTCTC+TGG | + | chr7.1:29716243-29716262 | None:intergenic | 35.0% |
! | TATGAACTTTGGTGATTGGA+AGG | + | chr7.1:29713980-29713999 | None:intergenic | 35.0% |
! | TTAATGGTTGAAAGCACAAG+TGG | + | chr7.1:29714074-29714093 | None:intergenic | 35.0% |
! | TTCGTACTCTTTTGCCTTAT+TGG | - | chr7.1:29714002-29714021 | MS.gene87751:CDS | 35.0% |
!! | AGCTAAACTAAAACTTGCTG+TGG | + | chr7.1:29715593-29715612 | None:intergenic | 35.0% |
!! | TGTTCTGAAGAATCTACAAC+TGG | + | chr7.1:29716112-29716131 | None:intergenic | 35.0% |
ACCTAGTTGGACTGTTCAAT+TGG | - | chr7.1:29715552-29715571 | MS.gene87751:intron | 40.0% | |
AGGTCACTTAAATCAAGAGG+AGG | + | chr7.1:29715729-29715748 | None:intergenic | 40.0% | |
ATGTTCAAAATGGCGAACCT+TGG | - | chr7.1:29716396-29716415 | MS.gene87751:CDS | 40.0% | |
CAGCACAAGAGACAGTATTA+GGG | + | chr7.1:29715121-29715140 | None:intergenic | 40.0% | |
CCTAGTTGGACTGTTCAATT+GGG | - | chr7.1:29715553-29715572 | MS.gene87751:intron | 40.0% | |
GACGATACATCAAGTTTCAC+AGG | - | chr7.1:29715011-29715030 | MS.gene87751:intron | 40.0% | |
GACTGTTCAATTGGGAAGAA+GGG | - | chr7.1:29715561-29715580 | MS.gene87751:intron | 40.0% | |
GAGCTGAAATTGTGCCAATA+AGG | + | chr7.1:29714019-29714038 | None:intergenic | 40.0% | |
TCAGCACAAGAGACAGTATT+AGG | + | chr7.1:29715122-29715141 | None:intergenic | 40.0% | |
TTCACAGGTGAAAAAACAGC+TGG | - | chr7.1:29715026-29715045 | MS.gene87751:intron | 40.0% | |
! | ATTGTCAAATGTCTCTGGAG+TGG | + | chr7.1:29716238-29716257 | None:intergenic | 40.0% |
! | TTTTACACCGTCCATGCATA+TGG | - | chr7.1:29714504-29714523 | MS.gene87751:intron | 40.0% |
!! | CGCCATTTTGAACATTGCAT+TGG | + | chr7.1:29716391-29716410 | None:intergenic | 40.0% |
AACTCAGATTTACCTGGTCC+TGG | - | chr7.1:29715613-29715632 | MS.gene87751:intron | 45.0% | |
AGACCACTTAGATCAGAACC+AGG | + | chr7.1:29715634-29715653 | None:intergenic | 45.0% | |
AGGTTTCACACCCAGAGAAA+TGG | - | chr7.1:29715675-29715694 | MS.gene87751:intron | 45.0% | |
CATTTCTGCTGTGGGTAATG+AGG | - | chr7.1:29714103-29714122 | MS.gene87751:CDS | 45.0% | |
CCAAACGCAAATTCACTGAG+AGG | - | chr7.1:29715050-29715069 | MS.gene87751:intron | 45.0% | |
CCCAATTGAACAGTCCAACT+AGG | + | chr7.1:29715556-29715575 | None:intergenic | 45.0% | |
CCTCTCAGTGAATTTGCGTT+TGG | + | chr7.1:29715053-29715072 | None:intergenic | 45.0% | |
GGACTGTTCAATTGGGAAGA+AGG | - | chr7.1:29715560-29715579 | MS.gene87751:intron | 45.0% | |
TTTGAGTGAGGTGCGATGAA+AGG | - | chr7.1:29714424-29714443 | MS.gene87751:intron | 45.0% | |
! | CAATCAAGTTGTCCCAGAAC+AGG | - | chr7.1:29716180-29716199 | MS.gene87751:intron | 45.0% |
! | CAGAGTGAAAGAGACCCTTT+TGG | + | chr7.1:29716284-29716303 | None:intergenic | 45.0% |
CTTAGATCAGAACCAGGACC+AGG | + | chr7.1:29715628-29715647 | None:intergenic | 50.0% | |
GACCACTAGACCCAGTAAGT+GGG | + | chr7.1:29716422-29716441 | None:intergenic | 50.0% | |
TGACCACTAGACCCAGTAAG+TGG | + | chr7.1:29716423-29716442 | None:intergenic | 50.0% | |
TGTAGCAGCAAGAGATTCCG+TGG | - | chr7.1:29715151-29715170 | MS.gene87751:intron | 50.0% | |
! | TCAAGTTGTCCCAGAACAGG+TGG | - | chr7.1:29716183-29716202 | MS.gene87751:intron | 50.0% |
! | TCTGGAGTGGTGGTATCAAG+TGG | + | chr7.1:29716225-29716244 | None:intergenic | 50.0% |
! | TTCAGCTTGGTGGACCTAGT+TGG | - | chr7.1:29715539-29715558 | MS.gene87751:intron | 50.0% |
!! | GGTCCTGGTTCTGATCTAAG+TGG | - | chr7.1:29715628-29715647 | MS.gene87751:intron | 50.0% |
!! | GTCAAATGTCTCTGGAGTGG+TGG | + | chr7.1:29716235-29716254 | None:intergenic | 50.0% |
CGAACCTTGGCCCACTTACT+GGG | - | chr7.1:29716409-29716428 | MS.gene87751:CDS | 55.0% | |
GTGGGTAATGAGGCTCGCAT+GGG | - | chr7.1:29714113-29714132 | MS.gene87751:CDS | 55.0% | |
TAGACCCAGTAAGTGGGCCA+AGG | + | chr7.1:29716416-29716435 | None:intergenic | 55.0% | |
TGGGTAATGAGGCTCGCATG+GGG | - | chr7.1:29714114-29714133 | MS.gene87751:CDS | 55.0% | |
TGTGGGTAATGAGGCTCGCA+TGG | - | chr7.1:29714112-29714131 | MS.gene87751:CDS | 55.0% | |
GCGAACCTTGGCCCACTTAC+TGG | - | chr7.1:29716408-29716427 | MS.gene87751:CDS | 60.0% | |
GGCCCACTTACTGGGTCTAG+TGG | - | chr7.1:29716417-29716436 | MS.gene87751:CDS | 60.0% | |
GGGTAATGAGGCTCGCATGG+GGG | - | chr7.1:29714115-29714134 | MS.gene87751:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 29713972 | 29716473 | 29713972 | ID=MS.gene87751 |
chr7.1 | mRNA | 29713972 | 29716473 | 29713972 | ID=MS.gene87751.t1;Parent=MS.gene87751 |
chr7.1 | exon | 29716329 | 29716473 | 29716329 | ID=MS.gene87751.t1.exon1;Parent=MS.gene87751.t1 |
chr7.1 | CDS | 29716329 | 29716473 | 29716329 | ID=cds.MS.gene87751.t1;Parent=MS.gene87751.t1 |
chr7.1 | exon | 29715267 | 29715412 | 29715267 | ID=MS.gene87751.t1.exon2;Parent=MS.gene87751.t1 |
chr7.1 | CDS | 29715267 | 29715412 | 29715267 | ID=cds.MS.gene87751.t1;Parent=MS.gene87751.t1 |
chr7.1 | exon | 29714736 | 29714901 | 29714736 | ID=MS.gene87751.t1.exon3;Parent=MS.gene87751.t1 |
chr7.1 | CDS | 29714736 | 29714901 | 29714736 | ID=cds.MS.gene87751.t1;Parent=MS.gene87751.t1 |
chr7.1 | exon | 29713972 | 29714357 | 29713972 | ID=MS.gene87751.t1.exon4;Parent=MS.gene87751.t1 |
chr7.1 | CDS | 29713972 | 29714357 | 29713972 | ID=cds.MS.gene87751.t1;Parent=MS.gene87751.t1 |
Gene Sequence |
Protein sequence |