AlfalfaGEDB | MS.gene053031

M. sativa cultivar XinJiangDaYe / MS.gene053031

KEGG: -
GO: GO:0003674 GO:0005488 GO:0030145 GO:0043167 GO:0043169 GO:0045735 GO:0046872 GO:0046914
PFAM: PF00190.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene053031.t1	XP_003618164.1	97.7	220	5	0	1	220	1	220	1.10E-117	432.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene053031.t1	Q9FIC9	64.8	216	73	2	3	215	4	219	5.2e-71	268.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene053031.t1	G7KQ17	97.7	220	5	0	1	220	1	220	8.1e-118	432.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049549	MS.gene053031	0.820309	7.34E-53	-1.69E-46
MS.gene050096	MS.gene053031	0.83036	3.07E-55	-1.69E-46
MS.gene051138	MS.gene053031	0.811948	5.42E-51	-1.69E-46
MS.gene052211	MS.gene053031	0.807122	5.90E-50	-1.69E-46
MS.gene05240	MS.gene053031	0.839414	1.61E-57	-1.69E-46
MS.gene05244	MS.gene053031	0.814111	1.82E-51	-1.69E-46
MS.gene053030	MS.gene053031	0.845752	3.34E-59	-1.69E-46
MS.gene053031	MS.gene053033	0.856354	3.40E-62	-1.69E-46
MS.gene053031	MS.gene053406	0.808468	3.05E-50	-1.69E-46
MS.gene053031	MS.gene053420	0.801632	8.22E-49	-1.69E-46
MS.gene053031	MS.gene054181	0.839401	1.62E-57	-1.69E-46
MS.gene053031	MS.gene05483	0.839073	1.97E-57	-1.69E-46
MS.gene053031	MS.gene056856	0.810036	1.41E-50	-1.69E-46
MS.gene053031	MS.gene057544	0.801691	7.99E-49	-1.69E-46
MS.gene053031	MS.gene057547	0.808255	3.39E-50	-1.69E-46
MS.gene053031	MS.gene059402	0.813484	2.50E-51	-1.69E-46
MS.gene053031	MS.gene059944	0.807623	4.62E-50	-1.69E-46
MS.gene053031	MS.gene062005	0.83174	1.41E-55	-1.69E-46
MS.gene053031	MS.gene062006	0.833734	4.50E-56	-1.69E-46
MS.gene053031	MS.gene064313	0.805782	1.13E-49	-1.69E-46
MS.gene053031	MS.gene066417	0.803881	2.82E-49	-1.69E-46
MS.gene053031	MS.gene066602	0.84213	3.12E-58	-1.69E-46
MS.gene053031	MS.gene066938	0.82838	9.28E-55	-1.69E-46
MS.gene053031	MS.gene069171	0.803897	2.80E-49	-1.69E-46
MS.gene053031	MS.gene069480	0.82434	8.51E-54	-1.69E-46
MS.gene053031	MS.gene069482	0.85447	1.20E-61	-1.69E-46
MS.gene053031	MS.gene071482	0.804712	1.89E-49	-1.69E-46
MS.gene053031	MS.gene071858	0.805842	1.10E-49	-1.69E-46
MS.gene053031	MS.gene073868	0.801247	9.85E-49	-1.69E-46
MS.gene053031	MS.gene08666	0.801138	1.04E-48	-1.69E-46
MS.gene053031	MS.gene08732	0.803235	3.84E-49	-1.69E-46
MS.gene053031	MS.gene08733	0.858401	8.45E-63	-1.69E-46
MS.gene053031	MS.gene21851	0.806848	6.74E-50	-1.69E-46
MS.gene053031	MS.gene25134	0.818854	1.58E-52	-1.69E-46
MS.gene053031	MS.gene26296	0.803666	3.13E-49	-1.69E-46
MS.gene053031	MS.gene26517	0.812984	3.22E-51	-1.69E-46
MS.gene053031	MS.gene28355	0.836746	7.81E-57	-1.69E-46
MS.gene053031	MS.gene28548	0.807858	4.12E-50	-1.69E-46
MS.gene053031	MS.gene28594	0.821245	4.47E-53	-1.69E-46
MS.gene053031	MS.gene28602	0.809768	1.61E-50	-1.69E-46
MS.gene053031	MS.gene29827	0.809661	1.69E-50	-1.69E-46
MS.gene053031	MS.gene30725	0.819199	1.32E-52	-1.69E-46
MS.gene053031	MS.gene33336	0.807401	5.15E-50	-1.69E-46
MS.gene053031	MS.gene35597	0.80769	4.47E-50	-1.69E-46
MS.gene053031	MS.gene35598	0.816645	4.97E-52	-1.69E-46
MS.gene053031	MS.gene35784	0.817369	3.42E-52	-1.69E-46
MS.gene053031	MS.gene37102	0.801358	9.35E-49	-1.69E-46
MS.gene053031	MS.gene37747	0.845037	5.21E-59	-1.69E-46
MS.gene053031	MS.gene37749	0.833766	4.42E-56	-1.69E-46
MS.gene053031	MS.gene37753	0.82213	2.79E-53	-1.69E-46
MS.gene053031	MS.gene38097	0.808312	3.29E-50	-1.69E-46
MS.gene053031	MS.gene38435	0.825379	4.84E-54	-1.69E-46
MS.gene053031	MS.gene42080	0.853788	1.89E-61	-1.69E-46
MS.gene053031	MS.gene42084	0.805218	1.48E-49	-1.69E-46
MS.gene053031	MS.gene43874	0.800597	1.34E-48	-1.69E-46
MS.gene053031	MS.gene44712	0.805291	1.43E-49	-1.69E-46
MS.gene053031	MS.gene45893	0.805596	1.24E-49	-1.69E-46
MS.gene053031	MS.gene46027	0.803054	4.19E-49	-1.69E-46
MS.gene053031	MS.gene46057	0.804562	2.04E-49	-1.69E-46
MS.gene053031	MS.gene46398	0.806933	6.47E-50	-1.69E-46
MS.gene053031	MS.gene47719	0.803934	2.75E-49	-1.69E-46
MS.gene053031	MS.gene48023	0.809253	2.07E-50	-1.69E-46
MS.gene053031	MS.gene48314	0.826764	2.27E-54	-1.69E-46
MS.gene053031	MS.gene48805	0.872119	4.06E-67	-1.69E-46
MS.gene053031	MS.gene48806	0.878738	2.20E-69	-1.69E-46
MS.gene053031	MS.gene48807	0.856401	3.30E-62	-1.69E-46
MS.gene053031	MS.gene49021	0.811793	5.86E-51	-1.69E-46
MS.gene053031	MS.gene50279	0.818183	2.24E-52	-1.69E-46
MS.gene053031	MS.gene50786	0.855384	6.54E-62	-1.69E-46
MS.gene053031	MS.gene50787	0.807777	4.28E-50	-1.69E-46
MS.gene053031	MS.gene50788	0.823104	1.66E-53	-1.69E-46
MS.gene053031	MS.gene50789	0.815021	1.14E-51	-1.69E-46
MS.gene053031	MS.gene50790	0.824298	8.71E-54	-1.69E-46
MS.gene053031	MS.gene51523	0.817605	3.02E-52	-1.69E-46
MS.gene053031	MS.gene51735	0.81393	1.99E-51	-1.69E-46
MS.gene053031	MS.gene52368	0.838264	3.19E-57	-1.69E-46
MS.gene053031	MS.gene52369	0.844553	7.04E-59	-1.69E-46
MS.gene053031	MS.gene52370	0.826876	2.13E-54	-1.69E-46
MS.gene053031	MS.gene52371	0.839478	1.55E-57	-1.69E-46
MS.gene053031	MS.gene52373	0.828534	8.52E-55	-1.69E-46
MS.gene053031	MS.gene54029	0.829899	3.98E-55	-1.69E-46
MS.gene053031	MS.gene54347	0.802998	4.30E-49	-1.69E-46
MS.gene053031	MS.gene54574	0.830944	2.21E-55	-1.69E-46
MS.gene053031	MS.gene56375	0.810797	9.64E-51	-1.69E-46
MS.gene053031	MS.gene56381	0.807253	5.53E-50	-1.69E-46
MS.gene053031	MS.gene56384	0.818193	2.23E-52	-1.69E-46
MS.gene053031	MS.gene56509	0.812675	3.76E-51	-1.69E-46
MS.gene053031	MS.gene57286	0.804963	1.68E-49	-1.69E-46
MS.gene053031	MS.gene57805	0.823877	1.09E-53	-1.69E-46
MS.gene053031	MS.gene57807	0.827551	1.47E-54	-1.69E-46
MS.gene053031	MS.gene59002	0.809287	2.04E-50	-1.69E-46
MS.gene053031	MS.gene59003	0.813014	3.17E-51	-1.69E-46
MS.gene053031	MS.gene59005	0.821089	4.86E-53	-1.69E-46
MS.gene053031	MS.gene60407	0.813888	2.04E-51	-1.69E-46
MS.gene053031	MS.gene60477	0.810723	1.00E-50	-1.69E-46
MS.gene053031	MS.gene60531	0.800633	1.32E-48	-1.69E-46
MS.gene053031	MS.gene60649	0.805219	1.48E-49	-1.69E-46
MS.gene053031	MS.gene61142	0.810633	1.05E-50	-1.69E-46
MS.gene053031	MS.gene61143	0.825922	3.60E-54	-1.69E-46
MS.gene053031	MS.gene61194	0.811966	5.37E-51	-1.69E-46
MS.gene053031	MS.gene62114	0.810529	1.10E-50	-1.69E-46
MS.gene053031	MS.gene62117	0.848944	4.44E-60	-1.69E-46
MS.gene053031	MS.gene62222	0.814221	1.72E-51	-1.69E-46
MS.gene053031	MS.gene63444	0.823348	1.45E-53	-1.69E-46
MS.gene053031	MS.gene63913	0.807528	4.84E-50	-1.69E-46
MS.gene053031	MS.gene63914	0.828412	9.12E-55	-1.69E-46
MS.gene053031	MS.gene64872	0.800941	1.14E-48	-1.69E-46
MS.gene053031	MS.gene65500	0.80282	4.68E-49	-1.69E-46
MS.gene053031	MS.gene65948	0.822631	2.14E-53	-1.69E-46
MS.gene053031	MS.gene65951	0.81278	3.57E-51	-1.69E-46
MS.gene053031	MS.gene66234	0.802997	4.30E-49	-1.69E-46
MS.gene053031	MS.gene67462	0.803887	2.81E-49	-1.69E-46
MS.gene053031	MS.gene69635	0.800405	1.46E-48	-1.69E-46
MS.gene053031	MS.gene69966	0.82551	4.51E-54	-1.69E-46
MS.gene053031	MS.gene70060	0.807716	4.41E-50	-1.69E-46
MS.gene053031	MS.gene70061	0.842903	1.95E-58	-1.69E-46
MS.gene053031	MS.gene70062	0.838402	2.94E-57	-1.69E-46
MS.gene053031	MS.gene70929	0.804674	1.93E-49	-1.69E-46
MS.gene053031	MS.gene71350	0.828473	8.82E-55	-1.69E-46
MS.gene053031	MS.gene72073	0.806909	6.54E-50	-1.69E-46
MS.gene053031	MS.gene72372	0.81562	8.42E-52	-1.69E-46
MS.gene053031	MS.gene73164	0.806351	8.58E-50	-1.69E-46
MS.gene053031	MS.gene74564	0.82299	1.76E-53	-1.69E-46
MS.gene053031	MS.gene74565	0.804302	2.31E-49	-1.69E-46
MS.gene053031	MS.gene74567	0.827994	1.15E-54	-1.69E-46
MS.gene053031	MS.gene74774	0.8166	5.09E-52	-1.69E-46
MS.gene053031	MS.gene74786	0.824549	7.60E-54	-1.69E-46
MS.gene053031	MS.gene75393	0.821097	4.84E-53	-1.69E-46
MS.gene053031	MS.gene75472	0.80664	7.46E-50	-1.69E-46
MS.gene053031	MS.gene76737	0.84099	6.23E-58	-1.69E-46
MS.gene053031	MS.gene76738	0.866542	2.64E-65	-1.69E-46
MS.gene053031	MS.gene77032	0.863157	3.04E-64	-1.69E-46
MS.gene053031	MS.gene77033	0.876145	1.76E-68	-1.69E-46
MS.gene053031	MS.gene77322	0.804574	2.02E-49	-1.69E-46
MS.gene053031	MS.gene77349	0.8169	4.36E-52	-1.69E-46
MS.gene053031	MS.gene77471	0.802166	6.38E-49	-1.69E-46
MS.gene053031	MS.gene77829	0.813593	2.37E-51	-1.69E-46
MS.gene053031	MS.gene78657	0.823945	1.05E-53	-1.69E-46
MS.gene053031	MS.gene79624	0.835377	1.74E-56	-1.69E-46
MS.gene053031	MS.gene79626	0.806134	9.53E-50	-1.69E-46
MS.gene053031	MS.gene81349	0.802266	6.09E-49	-1.69E-46
MS.gene053031	MS.gene81350	0.8054	1.36E-49	-1.69E-46
MS.gene053031	MS.gene81504	0.816364	5.75E-52	-1.69E-46
MS.gene053031	MS.gene81505	0.8073	5.41E-50	-1.69E-46
MS.gene053031	MS.gene81506	0.803919	2.77E-49	-1.69E-46
MS.gene053031	MS.gene82244	0.865216	6.94E-65	-1.69E-46
MS.gene053031	MS.gene82245	0.848184	7.20E-60	-1.69E-46
MS.gene053031	MS.gene82855	0.825781	3.89E-54	-1.69E-46
MS.gene053031	MS.gene82857	0.864532	1.14E-64	-1.69E-46
MS.gene053031	MS.gene82858	0.859518	3.91E-63	-1.69E-46
MS.gene053031	MS.gene82860	0.860199	2.44E-63	-1.69E-46
MS.gene053031	MS.gene84195	0.800416	1.46E-48	-1.69E-46
MS.gene053031	MS.gene84225	0.853086	3.01E-61	-1.69E-46
MS.gene053031	MS.gene84327	0.808563	2.91E-50	-1.69E-46
MS.gene053031	MS.gene85154	0.806049	9.93E-50	-1.69E-46
MS.gene053031	MS.gene85485	0.801206	1.00E-48	-1.69E-46
MS.gene053031	MS.gene87056	0.84604	2.79E-59	-1.69E-46
MS.gene053031	MS.gene87346	0.810841	9.43E-51	-1.69E-46
MS.gene053031	MS.gene87450	0.820288	7.43E-53	-1.69E-46
MS.gene053031	MS.gene87750	0.857902	1.19E-62	-1.69E-46
MS.gene053031	MS.gene87751	0.804275	2.34E-49	-1.69E-46
MS.gene053031	MS.gene88240	0.800487	1.41E-48	-1.69E-46
MS.gene053031	MS.gene89772	0.811662	6.26E-51	-1.69E-46
MS.gene053031	MS.gene89773	0.812183	4.82E-51	-1.69E-46
MS.gene053031	MS.gene89774	0.862405	5.19E-64	-1.69E-46
MS.gene053031	MS.gene89775	0.817499	3.19E-52	-1.69E-46
MS.gene053031	MS.gene91226	0.819231	1.29E-52	-1.69E-46
MS.gene053031	MS.gene92886	0.80503	1.63E-49	-1.69E-46
MS.gene053031	MS.gene94571	0.812703	3.71E-51	-1.69E-46
MS.gene053031	MS.gene95804	0.825512	4.50E-54	-1.69E-46
MS.gene053031	MS.gene96171	0.828929	6.84E-55	-1.69E-46
MS.gene053031	MS.gene96299	0.803673	3.12E-49	-1.69E-46
MS.gene053031	MS.gene96516	0.821794	3.34E-53	-1.69E-46
MS.gene053031	MS.gene97125	0.807643	4.57E-50	-1.69E-46
MS.gene053031	MS.gene97499	0.815921	7.22E-52	-1.69E-46
MS.gene053031	MS.gene98322	0.822436	2.37E-53	-1.69E-46
MS.gene053031	MS.gene99062	0.811832	5.75E-51	-1.69E-46
MS.gene053031	MS.gene99545	0.813198	2.89E-51	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene70061	MS.gene053031	PPI
MS.gene82858	MS.gene053031	PPI
MS.gene82857	MS.gene053031	PPI
MS.gene037519	MS.gene053031	PPI
MS.gene053031	MS.gene82855	PPI
MS.gene004411	MS.gene053031	PPI
MS.gene002728	MS.gene053031	PPI
MS.gene037517	MS.gene053031	PPI
MS.gene032596	MS.gene053031	PPI
MS.gene053031	MS.gene50789	PPI
MS.gene82860	MS.gene053031	PPI
MS.gene50788	MS.gene053031	PPI
MS.gene053031	MS.gene037518	PPI
MS.gene89772	MS.gene053031	PPI
MS.gene047464	MS.gene053031	PPI
MS.gene053031	MS.gene047464	PPI
MS.gene037516	MS.gene053031	PPI
MS.gene50790	MS.gene053031	PPI
MS.gene053031	MS.gene70061	PPI
MS.gene032598	MS.gene053031	PPI
MS.gene89773	MS.gene053031	PPI
MS.gene053031	MS.gene82857	PPI
MS.gene70063	MS.gene053031	PPI
MS.gene053033	MS.gene053031	PPI
MS.gene053027	MS.gene053031	PPI
MS.gene50789	MS.gene053031	PPI
MS.gene70064	MS.gene053031	PPI
MS.gene74887	MS.gene053031	PPI
MS.gene50787	MS.gene053031	PPI
MS.gene70062	MS.gene053031	PPI
MS.gene032599	MS.gene053031	PPI
MS.gene07591	MS.gene053031	PPI
MS.gene89774	MS.gene053031	PPI
MS.gene053031	MS.gene82859	PPI
MS.gene053029	MS.gene053031	PPI
MS.gene053030	MS.gene053031	PPI
MS.gene037520	MS.gene053031	PPI
MS.gene82859	MS.gene053031	PPI
MS.gene89775	MS.gene053031	PPI
MS.gene82855	MS.gene053031	PPI
MS.gene50786	MS.gene053031	PPI
MS.gene032601	MS.gene053031	PPI
MS.gene037518	MS.gene053031	PPI
MS.gene053026	MS.gene053031	PPI
MS.gene032597	MS.gene053031	PPI
MS.gene96244	MS.gene053031	PPI
MS.gene053031	MS.gene07591	PPI
MS.gene005041	MS.gene053031	PPI
MS.gene053031	MS.gene037520	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene053031.t1	MTR_6g005330	97.727	220	5	0	1	220	1	220	1.87e-157	434
MS.gene053031.t1	MTR_6g005360	95.909	220	9	0	1	220	1	220	1.66e-154	427
MS.gene053031.t1	MTR_6g005340	95.455	220	10	0	1	220	1	220	4.27e-153	424
MS.gene053031.t1	MTR_6g005310	95.890	219	9	0	1	219	1	219	4.46e-153	424
MS.gene053031.t1	MTR_1g079490	81.818	220	37	3	4	220	3	222	4.84e-127	358
MS.gene053031.t1	MTR_2g019250	78.829	222	44	3	1	220	1	221	2.68e-121	343
MS.gene053031.t1	MTR_4g017040	76.923	221	50	1	1	220	1	221	2.80e-121	343
MS.gene053031.t1	MTR_4g017050	78.378	222	45	3	1	220	1	221	4.80e-121	342
MS.gene053031.t1	MTR_5g046410	78.378	222	45	3	1	220	1	221	5.97e-121	342
MS.gene053031.t1	MTR_5g046430	78.378	222	45	3	1	220	1	221	5.97e-121	342
MS.gene053031.t1	MTR_4g017030	78.378	222	45	3	1	220	1	221	5.97e-121	342
MS.gene053031.t1	MTR_6g005350	76.818	220	50	1	1	220	1	219	1.19e-116	331
MS.gene053031.t1	MTR_6g005380	74.038	208	53	1	1	207	1	208	9.96e-107	306
MS.gene053031.t1	MTR_1g023770	63.317	199	63	2	19	215	19	209	8.37e-85	250
MS.gene053031.t1	MTR_2g030855	63.317	199	66	3	19	215	19	212	2.06e-83	247
MS.gene053031.t1	MTR_2g031270	63.000	200	66	4	19	215	19	213	8.05e-81	240
MS.gene053031.t1	MTR_2g030895	65.698	172	56	2	47	215	7	178	1.75e-76	228
MS.gene053031.t1	MTR_2g030865	65.698	172	56	2	47	215	7	178	4.81e-75	224
MS.gene053031.t1	MTR_2g031300	60.000	160	42	2	47	204	7	146	1.43e-59	184
MS.gene053031.t1	MTR_1g085500	46.667	210	102	4	11	214	8	213	8.44e-59	185
MS.gene053031.t1	MTR_7g111240	51.020	196	90	3	22	215	20	211	2.57e-56	178
MS.gene053031.t1	MTR_1g085140	48.000	200	98	3	18	215	20	215	2.54e-55	176
MS.gene053031.t1	MTR_7g111240	51.020	196	87	4	22	215	20	208	9.55e-54	171
MS.gene053031.t1	MTR_5g036570	47.716	197	96	4	22	215	27	219	1.04e-52	169
MS.gene053031.t1	MTR_1g112200	42.791	215	107	6	3	215	7	207	2.17e-47	155
MS.gene053031.t1	MTR_8g020750	46.597	191	91	4	1	189	3	184	1.54e-44	148
MS.gene053031.t1	MTR_1g060120	38.462	221	125	5	2	215	5	221	1.88e-44	148
MS.gene053031.t1	MTR_2g041550	45.455	187	94	4	28	212	23	203	4.57e-42	142
MS.gene053031.t1	MTR_2g041570	40.000	215	116	6	1	213	1	204	2.18e-37	129
MS.gene053031.t1	MTR_2g041580	40.187	214	115	6	1	212	1	203	2.40e-37	129
MS.gene053031.t1	MTR_8g020590	37.209	215	120	5	1	213	1	202	1.54e-35	125
MS.gene053031.t1	MTR_8g007300	39.796	196	113	4	5	199	10	201	3.86e-35	124
MS.gene053031.t1	MTR_8g020630	37.788	217	121	6	1	215	1	205	4.44e-35	124
MS.gene053031.t1	MTR_3g019710	38.498	213	117	5	4	215	6	205	1.25e-34	122
MS.gene053031.t1	MTR_8g020650	40.212	189	105	4	28	215	24	205	5.08e-34	121
MS.gene053031.t1	MTR_3g019680	37.441	211	118	5	6	215	7	204	7.15e-33	118
MS.gene053031.t1	MTR_2g036120	37.615	218	120	6	1	215	1	205	1.18e-32	117
MS.gene053031.t1	MTR_2g045100	39.791	191	107	4	26	215	22	205	1.57e-32	117
MS.gene053031.t1	MTR_3g019650	36.967	211	119	5	6	215	7	204	1.67e-32	117
MS.gene053031.t1	MTR_8g020770	38.462	221	115	6	1	215	3	208	1.87e-32	117
MS.gene053031.t1	MTR_2g044040	37.156	218	121	6	1	215	1	205	5.38e-32	115
MS.gene053031.t1	MTR_8g020670	37.696	191	111	4	26	215	22	205	4.62e-31	113
MS.gene053031.t1	MTR_8g020610	40.000	190	104	6	28	215	22	203	6.25e-31	113
MS.gene053031.t1	MTR_4g010340	36.574	216	120	6	1	215	2	201	6.97e-31	112
MS.gene053031.t1	MTR_8g020760	35.616	219	125	6	1	215	1	207	9.87e-30	110
MS.gene053031.t1	MTR_2g019780	36.111	216	127	6	1	215	3	208	1.52e-29	109
MS.gene053031.t1	MTR_3g096330	34.419	215	134	4	1	211	553	764	4.47e-29	114
MS.gene053031.t1	MTR_0284s0010	35.780	218	124	7	1	215	1	205	8.54e-29	107
MS.gene053031.t1	MTR_5g031460	34.101	217	129	6	1	215	1	205	2.85e-28	106
MS.gene053031.t1	MTR_7g011340	36.126	191	114	4	26	215	22	205	1.60e-27	104
MS.gene053031.t1	MTR_8g020763	36.000	175	105	3	43	215	17	186	3.87e-27	102
MS.gene053031.t1	MTR_4g052770	39.860	143	81	3	74	215	67	205	9.98e-27	102
MS.gene053031.t1	MTR_4g052780	39.860	143	81	3	74	215	67	205	1.64e-26	101
MS.gene053031.t1	MTR_2g086640	34.884	215	121	7	2	215	7	203	5.09e-26	100
MS.gene053031.t1	MTR_2g086620	35.294	221	112	9	2	215	8	204	5.99e-26	100
MS.gene053031.t1	MTR_2g086630	41.481	135	74	3	82	215	74	204	9.55e-26	99.8
MS.gene053031.t1	MTR_3g073170	35.602	191	109	6	28	215	27	206	1.03e-25	99.8
MS.gene053031.t1	MTR_2g030915	56.000	75	19	1	93	167	1	61	1.94e-20	82.8
MS.gene053031.t1	MTR_3g019810	32.243	214	125	8	1	212	107	302	3.71e-18	81.6
MS.gene053031.t1	MTR_4g027415	38.889	126	71	3	26	150	22	142	1.18e-16	73.9
MS.gene053031.t1	MTR_2g072560	41.346	104	58	2	18	120	14	115	1.11e-13	66.2
MS.gene053031.t1	MTR_3g019610	39.815	108	56	3	4	110	6	105	2.48e-11	58.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene053031.t1	AT5G39120	64.815	216	73	2	3	215	4	219	2.91e-93	272
MS.gene053031.t1	AT5G39150	64.352	216	74	2	3	215	4	219	2.28e-92	270
MS.gene053031.t1	AT5G39180	64.352	216	74	2	3	215	4	219	3.34e-92	270
MS.gene053031.t1	AT5G39110	64.977	217	72	3	2	215	5	220	4.93e-91	266
MS.gene053031.t1	AT5G38940	67.347	196	62	1	22	215	26	221	2.38e-90	265
MS.gene053031.t1	AT5G38940	67.347	196	62	1	22	215	50	245	4.12e-90	265
MS.gene053031.t1	AT3G05950	64.865	222	70	5	1	215	1	221	1.58e-89	263
MS.gene053031.t1	AT5G38930	67.677	198	62	1	20	215	24	221	1.94e-89	263
MS.gene053031.t1	AT5G39130	66.834	199	62	3	20	215	22	219	3.95e-89	262
MS.gene053031.t1	AT5G39160	67.337	199	61	3	20	215	22	219	4.41e-89	262
MS.gene053031.t1	AT5G39190	67.337	199	61	3	20	215	22	219	6.54e-89	261
MS.gene053031.t1	AT5G38960	64.677	201	68	2	18	215	22	222	4.75e-87	256
MS.gene053031.t1	AT5G38910	63.470	219	76	4	1	215	1	219	5.18e-87	256
MS.gene053031.t1	AT4G14630	65.327	199	66	2	20	215	24	222	1.18e-85	253
MS.gene053031.t1	AT5G39160	64.824	199	62	3	20	215	22	215	2.63e-84	249
MS.gene053031.t1	AT3G04200	65.072	209	68	4	11	215	15	222	4.15e-82	244
MS.gene053031.t1	AT3G04150	57.658	222	86	5	1	215	1	221	3.79e-76	229
MS.gene053031.t1	AT3G04150	55.128	234	86	5	1	215	1	234	3.16e-75	227
MS.gene053031.t1	AT5G39190	60.406	197	56	2	20	215	22	197	9.12e-75	224
MS.gene053031.t1	AT5G39160	59.898	197	57	2	20	215	22	197	1.90e-74	224
MS.gene053031.t1	AT3G04190	58.824	204	80	3	15	215	19	221	1.28e-73	223
MS.gene053031.t1	AT3G04170	55.856	222	87	6	1	215	1	218	2.29e-71	217
MS.gene053031.t1	AT3G04180	55.882	204	86	3	15	215	19	221	7.20e-70	213
MS.gene053031.t1	AT5G38910	51.598	219	65	5	1	215	1	182	1.76e-60	188
MS.gene053031.t1	AT3G62020	47.642	212	104	4	7	215	8	215	5.74e-57	180
MS.gene053031.t1	AT1G09560	49.746	197	93	3	22	216	24	216	6.48e-57	180
MS.gene053031.t1	AT1G02335	47.475	198	98	3	20	215	22	215	2.16e-56	179
MS.gene053031.t1	AT1G18970	45.662	219	108	5	1	217	11	220	4.38e-56	178
MS.gene053031.t1	AT1G18980	46.789	218	102	6	7	217	10	220	4.48e-54	172
MS.gene053031.t1	AT3G05930	45.116	215	110	4	4	215	6	215	8.06e-54	172
MS.gene053031.t1	AT5G26700	45.933	209	94	6	11	215	16	209	8.63e-52	167
MS.gene053031.t1	AT1G10460	42.714	199	107	5	22	215	19	215	1.76e-48	158
MS.gene053031.t1	AT3G62020	48.333	180	88	3	39	215	9	186	1.96e-48	157
MS.gene053031.t1	AT3G10080	41.379	203	107	5	19	215	23	219	2.77e-43	145
MS.gene053031.t1	AT3G10080	40.686	204	109	5	18	215	93	290	1.56e-42	145
MS.gene053031.t1	AT5G20630	41.885	191	101	4	1	189	1	183	6.41e-40	136
MS.gene053031.t1	AT5G61750	41.935	186	98	4	4	187	6	183	2.92e-38	132
MS.gene053031.t1	AT1G74820	37.674	215	118	5	11	215	17	225	7.58e-36	126
MS.gene053031.t1	AT1G72610	38.624	189	108	4	26	212	19	201	7.25e-33	118
MS.gene053031.t1	AT5G38950	65.625	64	22	0	144	207	2	65	4.91e-21	84.3
MS.gene053031.t1	AT5G39100	65.455	55	18	1	2	56	5	58	5.53e-16	70.1

Find 47 sgRNAs with CRISPR-Local

Find 61 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACTATTGCTAATGCTGTATT+TGG	0.046653	6.2:-1281676	MS.gene053031:CDS
TAGTAATAACACCTGGATTT+TGG	0.212711	6.2:+1281695	None:intergenic
GGAAATGCAGTTGCCATTGC+TGG	0.378013	6.2:-1281727	MS.gene053031:CDS
TCGTTTGCTGTAGCAAGCTT+TGG	0.401677	6.2:+1282066	None:intergenic
TTCCATACCCCACATTCAAT+TGG	0.409845	6.2:+1281746	None:intergenic
TGGAAGTGAATGAGACCAAT+TGG	0.411740	6.2:+1281766	None:intergenic
CTATTGCTAATGCTGTATTT+GGG	0.423500	6.2:-1281675	MS.gene053031:CDS
AGTATCTCATTAACAGTAAC+CGG	0.431864	6.2:+1281985	None:intergenic
ATTGTCCACTTGAAAAGCTT+TGG	0.448442	6.2:+1281621	None:intergenic
TTTCACAGCCTTCTTAGCAT+TGG	0.455174	6.2:-1282369	MS.gene053031:CDS
GATGTGTTTGTGTTTCCAAT+TGG	0.465821	6.2:-1281781	MS.gene053031:CDS
ATAAGAATCTCAGTAGCTCT+AGG	0.469422	6.2:+1281886	None:intergenic
CAAAAGTCTTGTAGAGGGCT+AGG	0.473790	6.2:+1282323	None:intergenic
TTCTTCTACTCAGTGAAAGA+AGG	0.477471	6.2:-1282042	MS.gene053031:CDS
TGAGATTCTTATAGTGTTGG+AGG	0.478695	6.2:-1281875	MS.gene053031:CDS
TCGTATTGACTTCGCTGCTA+GGG	0.481443	6.2:-1281932	MS.gene053031:CDS
CTCGTATTGACTTCGCTGCT+AGG	0.501926	6.2:-1281933	MS.gene053031:CDS
TTCCAATTGAATGTGGGGTA+TGG	0.505417	6.2:-1281748	MS.gene053031:CDS
TACTGAGATTCTTATAGTGT+TGG	0.510386	6.2:-1281878	MS.gene053031:CDS
ACAGGATGCCAATGCTAAGA+AGG	0.511869	6.2:+1282361	None:intergenic
CATTCACTTCCAATTGAATG+TGG	0.512147	6.2:-1281755	MS.gene053031:CDS
TGGAGGGTACTCTCTATGTC+GGG	0.514884	6.2:-1281858	MS.gene053031:CDS
AGTATACATACCACCAGTCT+TGG	0.516842	6.2:+1282283	None:intergenic
TTGGAGGGTACTCTCTATGT+CGG	0.525841	6.2:-1281859	MS.gene053031:CDS
ATTCACTTCCAATTGAATGT+GGG	0.537723	6.2:-1281754	MS.gene053031:CDS
GGACTTAGCAGCCAAAATCC+AGG	0.549743	6.2:-1281706	MS.gene053031:CDS
TTCACTTCCAATTGAATGTG+GGG	0.551943	6.2:-1281753	MS.gene053031:CDS
GTAGCTCTAGGGTGAGTATG+TGG	0.564452	6.2:+1281898	None:intergenic
AGGATCAAATGCAAAGGCAC+AGG	0.571312	6.2:+1282343	None:intergenic
ATACTAGGACTAAACACTCT+AGG	0.572011	6.2:-1281967	MS.gene053031:CDS
TAAGAATCTCAGTAGCTCTA+GGG	0.576817	6.2:+1281887	None:intergenic
TCAAGTGGACAATAACATAG+TGG	0.579525	6.2:-1281611	MS.gene053031:CDS
GTTACTGTTAATGAGATACT+AGG	0.582511	6.2:-1281982	MS.gene053031:CDS
TGTGAATGGCAAATTCTGCA+AGG	0.584711	6.2:-1282091	MS.gene053031:CDS
CGTATTGACTTCGCTGCTAG+GGG	0.590600	6.2:-1281931	MS.gene053031:CDS
GAGATTCTTATAGTGTTGGA+GGG	0.592161	6.2:-1281874	MS.gene053031:CDS
TTGGCTGCTAAGTCCAGCAA+TGG	0.600072	6.2:+1281714	None:intergenic
GCAATCAATGACACCAAGAC+TGG	0.608530	6.2:-1282296	MS.gene053031:CDS
GCCACACAAAAGTCTTGTAG+AGG	0.609133	6.2:+1282317	None:intergenic
ATCAATGACACCAAGACTGG+TGG	0.638381	6.2:-1282293	MS.gene053031:intron
GGAAATACATCAAATCCACT+TGG	0.640192	6.2:-1282021	MS.gene053031:CDS
ATCACAAAAGTACTCAACAA+AGG	0.644517	6.2:-1281805	MS.gene053031:CDS
CCACACAAAAGTCTTGTAGA+GGG	0.655758	6.2:+1282318	None:intergenic
AGGGCTAGGATCAAATGCAA+AGG	0.662548	6.2:+1282337	None:intergenic
ACTTGGTTCAAAAGTGACAC+CGG	0.669513	6.2:-1282004	MS.gene053031:CDS
GCTCTAGGGTGAGTATGTGG+AGG	0.686535	6.2:+1281901	None:intergenic
TTAGCAATAGTAATAACACC+TGG	0.687379	6.2:+1281688	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTATTTATTTTGATTCGTT+TGG	-	chr6.2:1281718-1281737	MS.gene053031:CDS	15.0%
!!!	ACAATCTTCAAAAACAATTT+TGG	-	chr6.2:1282374-1282393	MS.gene053031:CDS	20.0%
!!!	CAATCTTCAAAAACAATTTT+GGG	-	chr6.2:1282375-1282394	MS.gene053031:CDS	20.0%
!	ACTATGATACAAAAGTTTCA+CGG	-	chr6.2:1281762-1281781	MS.gene053031:CDS	25.0%
!!	CTTTTGTATCATAGTTCAAT+TGG	+	chr6.2:1281757-1281776	None:intergenic	25.0%
	ACTATTGCTAATGCTGTATT+TGG	-	chr6.2:1282286-1282305	MS.gene053031:intron	30.0%
	AGTATCTCATTAACAGTAAC+CGG	+	chr6.2:1281980-1281999	None:intergenic	30.0%
	ATTCACTTCCAATTGAATGT+GGG	-	chr6.2:1282208-1282227	MS.gene053031:intron	30.0%
	CTATGATACAAAAGTTTCAC+GGG	-	chr6.2:1281763-1281782	MS.gene053031:CDS	30.0%
	CTATTGCTAATGCTGTATTT+GGG	-	chr6.2:1282287-1282306	MS.gene053031:intron	30.0%
	GTTACTGTTAATGAGATACT+AGG	-	chr6.2:1281980-1281999	MS.gene053031:CDS	30.0%
	TACTGAGATTCTTATAGTGT+TGG	-	chr6.2:1282084-1282103	MS.gene053031:CDS	30.0%
	TTAGCAATAGTAATAACACC+TGG	+	chr6.2:1282277-1282296	None:intergenic	30.0%
!	AGAACTTCTGATGAGATTTT+AGG	+	chr6.2:1282319-1282338	None:intergenic	30.0%
!	TAGTAATAACACCTGGATTT+TGG	+	chr6.2:1282270-1282289	None:intergenic	30.0%
!	TCTTCAAAAACAATTTTGGG+TGG	-	chr6.2:1282378-1282397	MS.gene053031:CDS	30.0%
!	TGTTTTGCAGTTTTTGTGAA+TGG	-	chr6.2:1281857-1281876	MS.gene053031:CDS	30.0%
!!	ATCACAAAAGTACTCAACAA+AGG	-	chr6.2:1282157-1282176	MS.gene053031:intron	30.0%
	ATAAGAATCTCAGTAGCTCT+AGG	+	chr6.2:1282079-1282098	None:intergenic	35.0%
	ATACTAGGACTAAACACTCT+AGG	-	chr6.2:1281995-1282014	MS.gene053031:CDS	35.0%
	ATTGTCCACTTGAAAAGCTT+TGG	+	chr6.2:1282344-1282363	None:intergenic	35.0%
	CATTCACTTCCAATTGAATG+TGG	-	chr6.2:1282207-1282226	MS.gene053031:intron	35.0%
	GATGTGTTTGTGTTTCCAAT+TGG	-	chr6.2:1282181-1282200	MS.gene053031:intron	35.0%
	GGAAATACATCAAATCCACT+TGG	-	chr6.2:1281941-1281960	MS.gene053031:CDS	35.0%
	TCAAGTGGACAATAACATAG+TGG	-	chr6.2:1282351-1282370	MS.gene053031:CDS	35.0%
	TTCACTTCCAATTGAATGTG+GGG	-	chr6.2:1282209-1282228	MS.gene053031:intron	35.0%
	TTCTTCTACTCAGTGAAAGA+AGG	-	chr6.2:1281920-1281939	MS.gene053031:CDS	35.0%
!	GAGATTCTTATAGTGTTGGA+GGG	-	chr6.2:1282088-1282107	MS.gene053031:CDS	35.0%
!	TAAGAATCTCAGTAGCTCTA+GGG	+	chr6.2:1282078-1282097	None:intergenic	35.0%
!	TGAGATTCTTATAGTGTTGG+AGG	-	chr6.2:1282087-1282106	MS.gene053031:CDS	35.0%
!	TGAGTACTTTTGTGATGAGA+CGG	+	chr6.2:1282153-1282172	None:intergenic	35.0%
	ACTTGGTTCAAAAGTGACAC+CGG	-	chr6.2:1281958-1281977	MS.gene053031:CDS	40.0%
	AGTATACATACCACCAGTCT+TGG	+	chr6.2:1281682-1281701	None:intergenic	40.0%
	TGGAAGTGAATGAGACCAAT+TGG	+	chr6.2:1282199-1282218	None:intergenic	40.0%
	TGTGAATGGCAAATTCTGCA+AGG	-	chr6.2:1281871-1281890	MS.gene053031:CDS	40.0%
	TTCCAATTGAATGTGGGGTA+TGG	-	chr6.2:1282214-1282233	MS.gene053031:intron	40.0%
	TTCCATACCCCACATTCAAT+TGG	+	chr6.2:1282219-1282238	None:intergenic	40.0%
	TTTCACAGCCTTCTTAGCAT+TGG	-	chr6.2:1281593-1281612	MS.gene053031:CDS	40.0%
!	CCACACAAAAGTCTTGTAGA+GGG	+	chr6.2:1281647-1281666	None:intergenic	40.0%
!	TTTGTGATGAGACGGTTTTC+TGG	+	chr6.2:1282145-1282164	None:intergenic	40.0%
!!	TCTCACCAAAGCTTTTCAAG+TGG	-	chr6.2:1282336-1282355	MS.gene053031:CDS	40.0%
	ACAGGATGCCAATGCTAAGA+AGG	+	chr6.2:1281604-1281623	None:intergenic	45.0%
	AGGGCTAGGATCAAATGCAA+AGG	+	chr6.2:1281628-1281647	None:intergenic	45.0%
	ATCAATGACACCAAGACTGG+TGG	-	chr6.2:1281669-1281688	MS.gene053031:CDS	45.0%
	GCAATCAATGACACCAAGAC+TGG	-	chr6.2:1281666-1281685	MS.gene053031:CDS	45.0%
!	AGGATCAAATGCAAAGGCAC+AGG	+	chr6.2:1281622-1281641	None:intergenic	45.0%
!	CAAAAGTCTTGTAGAGGGCT+AGG	+	chr6.2:1281642-1281661	None:intergenic	45.0%
!	CCCTCTACAAGACTTTTGTG+TGG	-	chr6.2:1281644-1281663	MS.gene053031:CDS	45.0%
!	GCCACACAAAAGTCTTGTAG+AGG	+	chr6.2:1281648-1281667	None:intergenic	45.0%
!!	TCGTATTGACTTCGCTGCTA+GGG	-	chr6.2:1282030-1282049	MS.gene053031:CDS	45.0%
!!	TCGTTTGCTGTAGCAAGCTT+TGG	+	chr6.2:1281899-1281918	None:intergenic	45.0%
!!	TTGGAGGGTACTCTCTATGT+CGG	-	chr6.2:1282103-1282122	MS.gene053031:intron	45.0%
!!!	GGTGTCACTTTTGAACCAAG+TGG	+	chr6.2:1281959-1281978	None:intergenic	45.0%
	GGAAATGCAGTTGCCATTGC+TGG	-	chr6.2:1282235-1282254	MS.gene053031:intron	50.0%
	GGACTTAGCAGCCAAAATCC+AGG	-	chr6.2:1282256-1282275	MS.gene053031:intron	50.0%
	TTGGCTGCTAAGTCCAGCAA+TGG	+	chr6.2:1282251-1282270	None:intergenic	50.0%
!!	CGTATTGACTTCGCTGCTAG+GGG	-	chr6.2:1282031-1282050	MS.gene053031:CDS	50.0%
!!	CTCGTATTGACTTCGCTGCT+AGG	-	chr6.2:1282029-1282048	MS.gene053031:CDS	50.0%
!!	GTAGCTCTAGGGTGAGTATG+TGG	+	chr6.2:1282067-1282086	None:intergenic	50.0%
!!	TGGAGGGTACTCTCTATGTC+GGG	-	chr6.2:1282104-1282123	MS.gene053031:intron	50.0%
!!	GCTCTAGGGTGAGTATGTGG+AGG	+	chr6.2:1282064-1282083	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.2	gene	1281573	1282411	1281573	ID=MS.gene053031
chr6.2	mRNA	1281573	1282411	1281573	ID=MS.gene053031.t1;Parent=MS.gene053031
chr6.2	exon	1282294	1282411	1282294	ID=MS.gene053031.t1.exon1;Parent=MS.gene053031.t1
chr6.2	CDS	1282294	1282411	1282294	ID=cds.MS.gene053031.t1;Parent=MS.gene053031.t1
chr6.2	exon	1281573	1282117	1281573	ID=MS.gene053031.t1.exon2;Parent=MS.gene053031.t1
chr6.2	CDS	1281573	1282117	1281573	ID=cds.MS.gene053031.t1;Parent=MS.gene053031.t1

Gene Sequence

>MS.gene053031

ATGAAGAGTATTTACTTGTTTTTCACAGCCTTCTTAGCATTGGCATCCTGTGCCTTTGCATTTGATCCTAGCCCTCTACAAGACTTTTGTGTGGCAATCAATGACACCAAGACTGGTGGTATGTATACTTTTTAATACTTCTTCATTTATTTATTTTGATTCGTTTGGTCAACATGTTGAACCAATTGAACTATGATACAAAAGTTTCACGGGTGATTTCATGTCTAACAACGCTGATATATACATATATAAGTAGAGCATGTTATTTAATTACATGATGAATTTGTTTTGCAGTTTTTGTGAATGGCAAATTCTGCAAGGATCCAAAGCTTGCTACAGCAAACGATTTCTTCTACTCAGTGAAAGAAGGAAATACATCAAATCCACTTGGTTCAAAAGTGACACCGGTTACTGTTAATGAGATACTAGGACTAAACACTCTAGGTATATCTCTTGCTCGTATTGACTTCGCTGCTAGGGGACTAAATCCTCCACATACTCACCCTAGAGCTACTGAGATTCTTATAGTGTTGGAGGGTACTCTCTATGTCGGGTTTGTTACTTCTAATCCAGAAAACCGTCTCATCACAAAAGTACTCAACAAAGGAGATGTGTTTGTGTTTCCAATTGGTCTCATTCACTTCCAATTGAATGTGGGGTATGGAAATGCAGTTGCCATTGCTGGACTTAGCAGCCAAAATCCAGGTGTTATTACTATTGCTAATGCTGTATTTGGGTCTAATCCTAAAATCTCATCAGAAGTTCTCACCAAAGCTTTTCAAGTGGACAATAACATAGTGGACAATCTTCAAAAACAATTTTGGGTGGACAACAACTAG

Protein sequence

>MS.gene053031.t1

MKSIYLFFTAFLALASCAFAFDPSPLQDFCVAINDTKTGVFVNGKFCKDPKLATANDFFYSVKEGNTSNPLGSKVTPVTVNEILGLNTLGISLARIDFAARGLNPPHTHPRATEILIVLEGTLYVGFVTSNPENRLITKVLNKGDVFVFPIGLIHFQLNVGYGNAVAIAGLSSQNPGVITIANAVFGSNPKISSEVLTKAFQVDNNIVDNLQKQFWVDNN