Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058218.t1 | AAV66071.1 | 100 | 329 | 0 | 0 | 1 | 329 | 42 | 370 | 5.50E-193 | 683.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058218.t1 | Q03467 | 93.0 | 330 | 22 | 1 | 1 | 329 | 41 | 370 | 6.8e-184 | 644.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058218.t1 | Q5RLY0 | 100.0 | 329 | 0 | 0 | 1 | 329 | 42 | 370 | 3.9e-193 | 683.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050464 | MS.gene058218 | -0.81375 | 2.19E-51 | -1.69E-46 |
| MS.gene051158 | MS.gene058218 | 0.835513 | 1.61E-56 | -1.69E-46 |
| MS.gene052011 | MS.gene058218 | 0.805047 | 1.61E-49 | -1.69E-46 |
| MS.gene052223 | MS.gene058218 | 0.805531 | 1.28E-49 | -1.69E-46 |
| MS.gene052253 | MS.gene058218 | -0.803976 | 2.69E-49 | -1.69E-46 |
| MS.gene053406 | MS.gene058218 | 0.820554 | 6.45E-53 | -1.69E-46 |
| MS.gene054183 | MS.gene058218 | -0.825624 | 4.23E-54 | -1.69E-46 |
| MS.gene054290 | MS.gene058218 | 0.8039 | 2.80E-49 | -1.69E-46 |
| MS.gene054742 | MS.gene058218 | 0.808853 | 2.52E-50 | -1.69E-46 |
| MS.gene055601 | MS.gene058218 | 0.860493 | 1.99E-63 | -1.69E-46 |
| MS.gene056330 | MS.gene058218 | 0.810294 | 1.24E-50 | -1.69E-46 |
| MS.gene056899 | MS.gene058218 | 0.869792 | 2.37E-66 | -1.69E-46 |
| MS.gene058218 | MS.gene058928 | -0.826971 | 2.02E-54 | -1.69E-46 |
| MS.gene058218 | MS.gene059043 | 0.849281 | 3.58E-60 | -1.69E-46 |
| MS.gene058218 | MS.gene059294 | -0.835432 | 1.68E-56 | -1.69E-46 |
| MS.gene058218 | MS.gene059420 | -0.808968 | 2.39E-50 | -1.69E-46 |
| MS.gene058218 | MS.gene061836 | 0.803399 | 3.55E-49 | -1.69E-46 |
| MS.gene058218 | MS.gene061837 | 0.813463 | 2.53E-51 | -1.69E-46 |
| MS.gene058218 | MS.gene061838 | 0.81738 | 3.40E-52 | -1.69E-46 |
| MS.gene058218 | MS.gene062491 | 0.818592 | 1.81E-52 | -1.69E-46 |
| MS.gene058218 | MS.gene063114 | -0.815825 | 7.58E-52 | -1.69E-46 |
| MS.gene058218 | MS.gene06354 | 0.814242 | 1.70E-51 | -1.69E-46 |
| MS.gene058218 | MS.gene064674 | 0.804751 | 1.86E-49 | -1.69E-46 |
| MS.gene058218 | MS.gene066937 | 0.83989 | 1.21E-57 | -1.69E-46 |
| MS.gene058218 | MS.gene066938 | 0.865294 | 6.55E-65 | -1.69E-46 |
| MS.gene058218 | MS.gene066987 | 0.87873 | 2.22E-69 | -1.69E-46 |
| MS.gene058218 | MS.gene069431 | 0.804873 | 1.75E-49 | -1.69E-46 |
| MS.gene058218 | MS.gene069486 | 0.840152 | 1.03E-57 | -1.69E-46 |
| MS.gene058218 | MS.gene069487 | 0.864503 | 1.16E-64 | -1.69E-46 |
| MS.gene058218 | MS.gene070257 | 0.830998 | 2.14E-55 | -1.69E-46 |
| MS.gene058218 | MS.gene070835 | -0.806166 | 9.39E-50 | -1.69E-46 |
| MS.gene058218 | MS.gene071062 | -0.805593 | 1.24E-49 | -1.69E-46 |
| MS.gene058218 | MS.gene071108 | 0.820775 | 5.74E-53 | -1.69E-46 |
| MS.gene058218 | MS.gene071837 | 0.819735 | 9.94E-53 | -1.69E-46 |
| MS.gene058218 | MS.gene071839 | 0.808311 | 3.30E-50 | -1.69E-46 |
| MS.gene058218 | MS.gene072805 | 0.879248 | 1.45E-69 | -1.69E-46 |
| MS.gene058218 | MS.gene073173 | 0.832059 | 1.17E-55 | -1.69E-46 |
| MS.gene058218 | MS.gene073286 | 0.845503 | 3.90E-59 | -1.69E-46 |
| MS.gene058218 | MS.gene07702 | 0.819646 | 1.04E-52 | -1.69E-46 |
| MS.gene058218 | MS.gene08264 | -0.800739 | 1.25E-48 | -1.69E-46 |
| MS.gene058218 | MS.gene09768 | 0.82322 | 1.56E-53 | -1.69E-46 |
| MS.gene058218 | MS.gene09895 | 0.806281 | 8.88E-50 | -1.69E-46 |
| MS.gene058218 | MS.gene20315 | -0.802082 | 6.64E-49 | -1.69E-46 |
| MS.gene058218 | MS.gene20556 | -0.822879 | 1.87E-53 | -1.69E-46 |
| MS.gene058218 | MS.gene22386 | -0.804908 | 1.72E-49 | -1.69E-46 |
| MS.gene058218 | MS.gene23869 | 0.800536 | 1.38E-48 | -1.69E-46 |
| MS.gene058218 | MS.gene24862 | 0.800091 | 1.70E-48 | -1.69E-46 |
| MS.gene058218 | MS.gene26289 | 0.818293 | 2.11E-52 | -1.69E-46 |
| MS.gene058218 | MS.gene26624 | 0.802158 | 6.41E-49 | -1.69E-46 |
| MS.gene058218 | MS.gene26705 | 0.81316 | 2.95E-51 | -1.69E-46 |
| MS.gene058218 | MS.gene28314 | -0.804613 | 1.99E-49 | -1.69E-46 |
| MS.gene058218 | MS.gene28548 | 0.827944 | 1.18E-54 | -1.69E-46 |
| MS.gene058218 | MS.gene29105 | -0.806459 | 8.14E-50 | -1.69E-46 |
| MS.gene058218 | MS.gene30518 | 0.844409 | 7.70E-59 | -1.69E-46 |
| MS.gene058218 | MS.gene30519 | 0.861931 | 7.25E-64 | -1.69E-46 |
| MS.gene058218 | MS.gene30520 | 0.850755 | 1.38E-60 | -1.69E-46 |
| MS.gene058218 | MS.gene31266 | -0.829301 | 5.56E-55 | -1.69E-46 |
| MS.gene058218 | MS.gene35514 | -0.819331 | 1.23E-52 | -1.69E-46 |
| MS.gene058218 | MS.gene35721 | -0.83185 | 1.32E-55 | -1.69E-46 |
| MS.gene058218 | MS.gene37742 | 0.814834 | 1.26E-51 | -1.69E-46 |
| MS.gene058218 | MS.gene40169 | -0.807012 | 6.22E-50 | -1.69E-46 |
| MS.gene058218 | MS.gene40928 | 0.81588 | 7.37E-52 | -1.69E-46 |
| MS.gene058218 | MS.gene41015 | 0.830943 | 2.21E-55 | -1.69E-46 |
| MS.gene058218 | MS.gene42017 | 0.802461 | 5.55E-49 | -1.69E-46 |
| MS.gene058218 | MS.gene42080 | 0.829123 | 6.14E-55 | -1.69E-46 |
| MS.gene058218 | MS.gene42084 | 0.823972 | 1.04E-53 | -1.69E-46 |
| MS.gene058218 | MS.gene42096 | 0.83518 | 1.95E-56 | -1.69E-46 |
| MS.gene058218 | MS.gene43874 | 0.851721 | 7.38E-61 | -1.69E-46 |
| MS.gene058218 | MS.gene44712 | 0.809947 | 1.47E-50 | -1.69E-46 |
| MS.gene058218 | MS.gene44958 | 0.826465 | 2.67E-54 | -1.69E-46 |
| MS.gene058218 | MS.gene45694 | 0.814055 | 1.87E-51 | -1.69E-46 |
| MS.gene058218 | MS.gene46267 | 0.808251 | 3.39E-50 | -1.69E-46 |
| MS.gene058218 | MS.gene46272 | 0.840438 | 8.69E-58 | -1.69E-46 |
| MS.gene058218 | MS.gene48169 | 0.816564 | 5.18E-52 | -1.69E-46 |
| MS.gene058218 | MS.gene48182 | 0.870013 | 2.01E-66 | -1.69E-46 |
| MS.gene058218 | MS.gene48184 | 0.85084 | 1.31E-60 | -1.69E-46 |
| MS.gene058218 | MS.gene48787 | 0.80062 | 1.32E-48 | -1.69E-46 |
| MS.gene058218 | MS.gene48806 | 0.820049 | 8.42E-53 | -1.69E-46 |
| MS.gene058218 | MS.gene48807 | 0.828217 | 1.02E-54 | -1.69E-46 |
| MS.gene058218 | MS.gene50068 | 0.808632 | 2.81E-50 | -1.69E-46 |
| MS.gene058218 | MS.gene50069 | 0.814512 | 1.48E-51 | -1.69E-46 |
| MS.gene058218 | MS.gene50786 | 0.818777 | 1.64E-52 | -1.69E-46 |
| MS.gene058218 | MS.gene50787 | 0.875552 | 2.82E-68 | -1.69E-46 |
| MS.gene058218 | MS.gene50790 | 0.842636 | 2.29E-58 | -1.69E-46 |
| MS.gene058218 | MS.gene51007 | 0.803771 | 2.97E-49 | -1.69E-46 |
| MS.gene058218 | MS.gene51120 | 0.844731 | 6.31E-59 | -1.69E-46 |
| MS.gene058218 | MS.gene52368 | 0.830833 | 2.35E-55 | -1.69E-46 |
| MS.gene058218 | MS.gene52369 | 0.833558 | 4.98E-56 | -1.69E-46 |
| MS.gene058218 | MS.gene52371 | 0.828255 | 9.95E-55 | -1.69E-46 |
| MS.gene058218 | MS.gene52373 | 0.813004 | 3.19E-51 | -1.69E-46 |
| MS.gene058218 | MS.gene54029 | 0.819273 | 1.27E-52 | -1.69E-46 |
| MS.gene058218 | MS.gene54611 | 0.85616 | 3.88E-62 | -1.69E-46 |
| MS.gene058218 | MS.gene56009 | 0.856433 | 3.23E-62 | -1.69E-46 |
| MS.gene058218 | MS.gene57813 | 0.846334 | 2.32E-59 | -1.69E-46 |
| MS.gene058218 | MS.gene57944 | 0.82009 | 8.24E-53 | -1.69E-46 |
| MS.gene058218 | MS.gene58740 | 0.805446 | 1.33E-49 | -1.69E-46 |
| MS.gene058218 | MS.gene59006 | 0.813651 | 2.30E-51 | -1.69E-46 |
| MS.gene058218 | MS.gene61508 | 0.811709 | 6.11E-51 | -1.69E-46 |
| MS.gene058218 | MS.gene62417 | 0.825225 | 5.27E-54 | -1.69E-46 |
| MS.gene058218 | MS.gene62885 | 0.867388 | 1.42E-65 | -1.69E-46 |
| MS.gene058218 | MS.gene62886 | 0.867719 | 1.11E-65 | -1.69E-46 |
| MS.gene058218 | MS.gene63913 | 0.825513 | 4.50E-54 | -1.69E-46 |
| MS.gene058218 | MS.gene65287 | 0.875617 | 2.67E-68 | -1.69E-46 |
| MS.gene058218 | MS.gene65500 | 0.803485 | 3.41E-49 | -1.69E-46 |
| MS.gene058218 | MS.gene66157 | -0.806449 | 8.18E-50 | -1.69E-46 |
| MS.gene058218 | MS.gene66847 | -0.812503 | 4.10E-51 | -1.69E-46 |
| MS.gene058218 | MS.gene66895 | 0.809618 | 1.73E-50 | -1.69E-46 |
| MS.gene058218 | MS.gene70061 | 0.804213 | 2.41E-49 | -1.69E-46 |
| MS.gene058218 | MS.gene70062 | 0.851908 | 6.53E-61 | -1.69E-46 |
| MS.gene058218 | MS.gene70064 | 0.867486 | 1.32E-65 | -1.69E-46 |
| MS.gene058218 | MS.gene71342 | 0.801125 | 1.04E-48 | -1.69E-46 |
| MS.gene058218 | MS.gene71395 | 0.810419 | 1.16E-50 | -1.69E-46 |
| MS.gene058218 | MS.gene71924 | 0.823268 | 1.52E-53 | -1.69E-46 |
| MS.gene058218 | MS.gene71927 | 0.858121 | 1.02E-62 | -1.69E-46 |
| MS.gene058218 | MS.gene72924 | 0.865416 | 6.00E-65 | -1.69E-46 |
| MS.gene058218 | MS.gene74030 | 0.849465 | 3.18E-60 | -1.69E-46 |
| MS.gene058218 | MS.gene74031 | 0.847206 | 1.34E-59 | -1.69E-46 |
| MS.gene058218 | MS.gene74032 | 0.83143 | 1.68E-55 | -1.69E-46 |
| MS.gene058218 | MS.gene74553 | 0.835218 | 1.91E-56 | -1.69E-46 |
| MS.gene058218 | MS.gene75396 | 0.813093 | 3.05E-51 | -1.69E-46 |
| MS.gene058218 | MS.gene76737 | 0.82377 | 1.16E-53 | -1.69E-46 |
| MS.gene058218 | MS.gene76738 | 0.803726 | 3.04E-49 | -1.69E-46 |
| MS.gene058218 | MS.gene76757 | 0.80548 | 1.31E-49 | -1.69E-46 |
| MS.gene058218 | MS.gene77006 | 0.811058 | 8.46E-51 | -1.69E-46 |
| MS.gene058218 | MS.gene78431 | -0.80337 | 3.60E-49 | -1.69E-46 |
| MS.gene058218 | MS.gene79179 | -0.80121 | 1.00E-48 | -1.69E-46 |
| MS.gene058218 | MS.gene79442 | 0.818558 | 1.84E-52 | -1.69E-46 |
| MS.gene058218 | MS.gene79443 | 0.807118 | 5.91E-50 | -1.69E-46 |
| MS.gene058218 | MS.gene79444 | 0.831485 | 1.63E-55 | -1.69E-46 |
| MS.gene058218 | MS.gene79445 | 0.813376 | 2.64E-51 | -1.69E-46 |
| MS.gene058218 | MS.gene80744 | 0.80044 | 1.44E-48 | -1.69E-46 |
| MS.gene058218 | MS.gene81349 | 0.837647 | 4.59E-57 | -1.69E-46 |
| MS.gene058218 | MS.gene81350 | 0.800945 | 1.14E-48 | -1.69E-46 |
| MS.gene058218 | MS.gene81770 | 0.804273 | 2.34E-49 | -1.69E-46 |
| MS.gene058218 | MS.gene82244 | 0.802946 | 4.41E-49 | -1.69E-46 |
| MS.gene058218 | MS.gene82245 | 0.832219 | 1.07E-55 | -1.69E-46 |
| MS.gene058218 | MS.gene82533 | -0.81625 | 6.09E-52 | -1.69E-46 |
| MS.gene058218 | MS.gene82855 | 0.812765 | 3.60E-51 | -1.69E-46 |
| MS.gene058218 | MS.gene83008 | 0.824541 | 7.63E-54 | -1.69E-46 |
| MS.gene058218 | MS.gene83011 | 0.822706 | 2.05E-53 | -1.69E-46 |
| MS.gene058218 | MS.gene83012 | 0.803949 | 2.73E-49 | -1.69E-46 |
| MS.gene058218 | MS.gene84373 | 0.814788 | 1.29E-51 | -1.69E-46 |
| MS.gene058218 | MS.gene85276 | 0.808832 | 2.55E-50 | -1.69E-46 |
| MS.gene058218 | MS.gene85750 | 0.819219 | 1.30E-52 | -1.69E-46 |
| MS.gene058218 | MS.gene87043 | 0.834088 | 3.67E-56 | -1.69E-46 |
| MS.gene058218 | MS.gene87055 | 0.847968 | 8.26E-60 | -1.69E-46 |
| MS.gene058218 | MS.gene87056 | 0.813305 | 2.74E-51 | -1.69E-46 |
| MS.gene058218 | MS.gene87346 | 0.813704 | 2.24E-51 | -1.69E-46 |
| MS.gene058218 | MS.gene87750 | 0.812602 | 3.90E-51 | -1.69E-46 |
| MS.gene058218 | MS.gene87751 | 0.83108 | 2.04E-55 | -1.69E-46 |
| MS.gene058218 | MS.gene89772 | 0.858943 | 5.82E-63 | -1.69E-46 |
| MS.gene058218 | MS.gene89773 | 0.865858 | 4.35E-65 | -1.69E-46 |
| MS.gene058218 | MS.gene89775 | 0.834622 | 2.69E-56 | -1.69E-46 |
| MS.gene058218 | MS.gene89982 | 0.825321 | 5.00E-54 | -1.69E-46 |
| MS.gene058218 | MS.gene90814 | 0.82421 | 9.13E-54 | -1.69E-46 |
| MS.gene058218 | MS.gene91221 | 0.82333 | 1.47E-53 | -1.69E-46 |
| MS.gene058218 | MS.gene91222 | 0.80096 | 1.13E-48 | -1.69E-46 |
| MS.gene058218 | MS.gene91509 | -0.816774 | 4.65E-52 | -1.69E-46 |
| MS.gene058218 | MS.gene92773 | -0.821868 | 3.21E-53 | -1.69E-46 |
| MS.gene058218 | MS.gene92871 | -0.821572 | 3.76E-53 | -1.69E-46 |
| MS.gene058218 | MS.gene93632 | 0.814344 | 1.62E-51 | -1.69E-46 |
| MS.gene058218 | MS.gene95352 | 0.831202 | 1.91E-55 | -1.69E-46 |
| MS.gene058218 | MS.gene95353 | 0.813852 | 2.08E-51 | -1.69E-46 |
| MS.gene058218 | MS.gene97335 | 0.851194 | 1.04E-60 | -1.69E-46 |
| MS.gene058218 | MS.gene97500 | 0.821389 | 4.14E-53 | -1.69E-46 |
| MS.gene058218 | MS.gene97788 | 0.838491 | 2.79E-57 | -1.69E-46 |
| MS.gene058218 | MS.gene97823 | 0.805795 | 1.12E-49 | -1.69E-46 |
| MS.gene058218 | MS.gene98786 | -0.813108 | 3.02E-51 | -1.69E-46 |
| MS.gene058218 | MS.gene98878 | 0.84403 | 9.73E-59 | -1.69E-46 |
| MS.gene058218 | MS.gene99544 | 0.863628 | 2.17E-64 | -1.69E-46 |
| MS.gene058218 | MS.gene99545 | 0.847763 | 9.41E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058218.t1 | MTR_2g034480 | 98.480 | 329 | 5 | 0 | 1 | 329 | 34 | 362 | 0.0 | 667 |
| MS.gene058218.t1 | MTR_2g034470 | 77.204 | 329 | 72 | 1 | 1 | 329 | 37 | 362 | 0.0 | 519 |
| MS.gene058218.t1 | MTR_2g034470 | 77.204 | 329 | 72 | 1 | 1 | 329 | 2 | 327 | 0.0 | 518 |
| MS.gene058218.t1 | MTR_2g034440 | 77.124 | 306 | 69 | 1 | 2 | 306 | 30 | 335 | 9.20e-174 | 485 |
| MS.gene058218.t1 | MTR_4g076570 | 55.049 | 307 | 134 | 3 | 1 | 305 | 29 | 333 | 2.00e-115 | 338 |
| MS.gene058218.t1 | MTR_1g052430 | 54.934 | 304 | 133 | 3 | 1 | 302 | 39 | 340 | 2.07e-113 | 335 |
| MS.gene058218.t1 | MTR_4g076470 | 55.700 | 307 | 127 | 4 | 1 | 306 | 30 | 328 | 1.66e-111 | 327 |
| MS.gene058218.t1 | MTR_4g076490 | 54.194 | 310 | 132 | 5 | 1 | 308 | 104 | 405 | 1.77e-106 | 317 |
| MS.gene058218.t1 | MTR_4g076440 | 54.397 | 307 | 131 | 4 | 1 | 306 | 30 | 328 | 1.52e-105 | 312 |
| MS.gene058218.t1 | MTR_4g076255 | 54.723 | 307 | 128 | 6 | 2 | 306 | 33 | 330 | 2.74e-105 | 311 |
| MS.gene058218.t1 | MTR_4g076430 | 53.746 | 307 | 133 | 4 | 1 | 306 | 30 | 328 | 9.95e-104 | 307 |
| MS.gene058218.t1 | MTR_4g076500 | 50.667 | 300 | 138 | 5 | 1 | 296 | 85 | 378 | 1.93e-98 | 296 |
| MS.gene058218.t1 | MTR_7g081350 | 44.300 | 307 | 161 | 6 | 2 | 304 | 35 | 335 | 5.36e-79 | 244 |
| MS.gene058218.t1 | MTR_7g081370 | 42.295 | 305 | 157 | 6 | 2 | 304 | 36 | 323 | 1.56e-71 | 225 |
| MS.gene058218.t1 | MTR_5g085580 | 43.131 | 313 | 163 | 9 | 1 | 302 | 32 | 340 | 2.31e-71 | 229 |
| MS.gene058218.t1 | MTR_1g056640 | 38.978 | 313 | 176 | 8 | 1 | 302 | 45 | 353 | 1.36e-66 | 217 |
| MS.gene058218.t1 | MTR_6g088885 | 36.254 | 331 | 196 | 8 | 2 | 322 | 35 | 360 | 5.97e-66 | 216 |
| MS.gene058218.t1 | MTR_4g010200 | 37.736 | 318 | 189 | 6 | 1 | 310 | 40 | 356 | 1.04e-65 | 212 |
| MS.gene058218.t1 | MTR_4g114850 | 34.911 | 338 | 197 | 10 | 1 | 326 | 33 | 359 | 1.60e-64 | 208 |
| MS.gene058218.t1 | MTR_4g114850 | 34.911 | 338 | 197 | 10 | 1 | 326 | 33 | 359 | 1.80e-64 | 208 |
| MS.gene058218.t1 | MTR_4g114850 | 34.911 | 338 | 197 | 10 | 1 | 326 | 33 | 359 | 2.05e-64 | 208 |
| MS.gene058218.t1 | MTR_3g080410 | 40.432 | 324 | 176 | 10 | 1 | 311 | 33 | 352 | 3.58e-64 | 207 |
| MS.gene058218.t1 | MTR_2g086530 | 35.608 | 337 | 195 | 10 | 1 | 321 | 15 | 345 | 2.37e-61 | 200 |
| MS.gene058218.t1 | MTR_4g069940 | 37.778 | 315 | 185 | 7 | 1 | 306 | 36 | 348 | 3.93e-61 | 202 |
| MS.gene058218.t1 | MTR_2g086530 | 35.608 | 337 | 195 | 10 | 1 | 321 | 36 | 366 | 4.23e-61 | 200 |
| MS.gene058218.t1 | MTR_1g077990 | 37.380 | 313 | 187 | 7 | 1 | 306 | 38 | 348 | 1.22e-60 | 199 |
| MS.gene058218.t1 | MTR_4g084480 | 37.975 | 316 | 186 | 7 | 1 | 308 | 39 | 352 | 2.02e-60 | 198 |
| MS.gene058218.t1 | MTR_4g084480 | 37.975 | 316 | 186 | 7 | 1 | 308 | 32 | 345 | 2.25e-60 | 198 |
| MS.gene058218.t1 | MTR_4g084480 | 37.975 | 316 | 186 | 7 | 1 | 308 | 39 | 352 | 2.66e-60 | 198 |
| MS.gene058218.t1 | MTR_8g012400 | 35.093 | 322 | 193 | 9 | 1 | 309 | 36 | 354 | 4.65e-60 | 199 |
| MS.gene058218.t1 | MTR_3g116510 | 36.508 | 315 | 189 | 7 | 2 | 307 | 36 | 348 | 2.71e-59 | 197 |
| MS.gene058218.t1 | MTR_4g052970 | 35.759 | 316 | 193 | 7 | 1 | 308 | 36 | 349 | 7.01e-59 | 194 |
| MS.gene058218.t1 | MTR_1g007810 | 37.168 | 339 | 197 | 10 | 1 | 329 | 23 | 355 | 3.85e-58 | 191 |
| MS.gene058218.t1 | MTR_1g022160 | 36.050 | 319 | 194 | 7 | 1 | 310 | 31 | 348 | 7.97e-58 | 192 |
| MS.gene058218.t1 | MTR_7g053500 | 34.161 | 322 | 196 | 9 | 1 | 309 | 33 | 351 | 8.44e-58 | 193 |
| MS.gene058218.t1 | MTR_1g022160 | 36.050 | 319 | 194 | 7 | 1 | 310 | 31 | 348 | 2.93e-57 | 192 |
| MS.gene058218.t1 | MTR_1g022160 | 36.050 | 319 | 194 | 7 | 1 | 310 | 31 | 348 | 3.39e-57 | 192 |
| MS.gene058218.t1 | MTR_1g022160 | 36.050 | 319 | 194 | 7 | 1 | 310 | 31 | 348 | 3.85e-57 | 192 |
| MS.gene058218.t1 | MTR_1g031900 | 37.658 | 316 | 184 | 7 | 4 | 308 | 34 | 347 | 3.92e-57 | 192 |
| MS.gene058218.t1 | MTR_1g031900 | 37.539 | 317 | 185 | 7 | 3 | 308 | 33 | 347 | 4.02e-57 | 192 |
| MS.gene058218.t1 | MTR_4g124440 | 35.463 | 313 | 193 | 5 | 7 | 311 | 41 | 352 | 1.32e-56 | 191 |
| MS.gene058218.t1 | MTR_7g026340 | 37.460 | 315 | 181 | 12 | 1 | 306 | 30 | 337 | 8.84e-56 | 187 |
| MS.gene058218.t1 | MTR_4g132280 | 35.647 | 317 | 189 | 8 | 4 | 308 | 55 | 368 | 1.37e-55 | 189 |
| MS.gene058218.t1 | MTR_5g078200 | 35.522 | 335 | 202 | 8 | 5 | 328 | 1 | 332 | 2.13e-53 | 185 |
| MS.gene058218.t1 | MTR_5g078200 | 35.312 | 337 | 204 | 8 | 3 | 328 | 32 | 365 | 2.46e-53 | 185 |
| MS.gene058218.t1 | MTR_3g065460 | 35.168 | 327 | 197 | 8 | 3 | 318 | 33 | 355 | 2.19e-52 | 180 |
| MS.gene058218.t1 | MTR_4g088155 | 33.129 | 326 | 198 | 10 | 1 | 310 | 30 | 351 | 9.87e-52 | 177 |
| MS.gene058218.t1 | MTR_3g083580 | 33.016 | 315 | 197 | 8 | 4 | 306 | 36 | 348 | 5.36e-51 | 176 |
| MS.gene058218.t1 | MTR_2g019345 | 35.783 | 313 | 190 | 8 | 1 | 305 | 31 | 340 | 4.88e-50 | 171 |
| MS.gene058218.t1 | MTR_8g085720 | 33.535 | 331 | 205 | 9 | 3 | 322 | 35 | 361 | 8.34e-50 | 173 |
| MS.gene058218.t1 | MTR_2g027560 | 34.628 | 309 | 191 | 6 | 9 | 307 | 43 | 350 | 1.02e-49 | 172 |
| MS.gene058218.t1 | MTR_7g085390 | 32.817 | 323 | 204 | 7 | 5 | 317 | 38 | 357 | 1.52e-49 | 172 |
| MS.gene058218.t1 | MTR_8g092070 | 32.039 | 309 | 201 | 5 | 9 | 309 | 49 | 356 | 2.59e-48 | 171 |
| MS.gene058218.t1 | MTR_8g102340 | 35.448 | 268 | 159 | 7 | 52 | 309 | 52 | 315 | 5.61e-48 | 168 |
| MS.gene058218.t1 | MTR_8g012400 | 34.420 | 276 | 165 | 9 | 47 | 309 | 2 | 274 | 1.64e-47 | 164 |
| MS.gene058218.t1 | MTR_1g010120 | 33.750 | 320 | 198 | 8 | 5 | 314 | 38 | 353 | 4.75e-47 | 165 |
| MS.gene058218.t1 | MTR_6g032820 | 32.899 | 307 | 192 | 6 | 9 | 303 | 41 | 345 | 9.32e-47 | 164 |
| MS.gene058218.t1 | MTR_4g083500 | 35.802 | 324 | 191 | 12 | 1 | 313 | 51 | 368 | 1.06e-46 | 166 |
| MS.gene058218.t1 | MTR_4g112025 | 32.622 | 328 | 206 | 8 | 3 | 317 | 41 | 366 | 3.73e-46 | 164 |
| MS.gene058218.t1 | MTR_3g095050 | 32.372 | 312 | 194 | 8 | 9 | 309 | 49 | 354 | 2.42e-45 | 161 |
| MS.gene058218.t1 | MTR_7g053500 | 33.333 | 276 | 168 | 9 | 47 | 309 | 2 | 274 | 5.69e-45 | 158 |
| MS.gene058218.t1 | MTR_3g108600 | 33.544 | 316 | 175 | 10 | 11 | 314 | 48 | 340 | 4.21e-43 | 155 |
| MS.gene058218.t1 | MTR_1g053320 | 31.013 | 316 | 207 | 6 | 3 | 308 | 40 | 354 | 9.05e-43 | 154 |
| MS.gene058218.t1 | MTR_3g031770 | 32.154 | 311 | 199 | 9 | 5 | 307 | 39 | 345 | 8.80e-42 | 151 |
| MS.gene058218.t1 | MTR_4g134280 | 35.043 | 234 | 143 | 5 | 81 | 307 | 2 | 233 | 1.29e-35 | 132 |
| MS.gene058218.t1 | MTR_5g081720 | 32.881 | 295 | 179 | 12 | 19 | 302 | 62 | 348 | 1.38e-35 | 132 |
| MS.gene058218.t1 | MTR_3g116510 | 36.744 | 215 | 126 | 6 | 102 | 307 | 1 | 214 | 5.26e-35 | 130 |
| MS.gene058218.t1 | MTR_4g036680 | 55.319 | 94 | 40 | 2 | 211 | 302 | 80 | 173 | 1.03e-27 | 108 |
| MS.gene058218.t1 | MTR_4g036680 | 66.071 | 56 | 19 | 0 | 1 | 56 | 29 | 84 | 7.62e-19 | 84.0 |
| MS.gene058218.t1 | MTR_4g036775 | 55.319 | 94 | 40 | 2 | 211 | 302 | 80 | 173 | 4.01e-27 | 106 |
| MS.gene058218.t1 | MTR_4g036775 | 66.071 | 56 | 19 | 0 | 1 | 56 | 29 | 84 | 1.05e-18 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058218.t1 | AT4G16260 | 63.522 | 318 | 108 | 4 | 1 | 315 | 2 | 314 | 1.85e-142 | 405 |
| MS.gene058218.t1 | AT4G16260 | 63.522 | 318 | 108 | 4 | 1 | 315 | 31 | 343 | 2.21e-142 | 406 |
| MS.gene058218.t1 | AT3G57240 | 56.352 | 307 | 123 | 6 | 2 | 306 | 43 | 340 | 2.19e-108 | 320 |
| MS.gene058218.t1 | AT3G57270 | 51.623 | 308 | 143 | 3 | 2 | 306 | 35 | 339 | 1.38e-104 | 310 |
| MS.gene058218.t1 | AT3G57260 | 50.649 | 308 | 142 | 4 | 1 | 306 | 39 | 338 | 1.49e-99 | 297 |
| MS.gene058218.t1 | AT3G57260 | 50.649 | 308 | 142 | 4 | 1 | 306 | 55 | 354 | 2.06e-99 | 297 |
| MS.gene058218.t1 | AT5G20390 | 39.672 | 305 | 173 | 6 | 1 | 300 | 40 | 338 | 2.97e-72 | 227 |
| MS.gene058218.t1 | AT5G56590 | 37.538 | 325 | 183 | 8 | 2 | 312 | 34 | 352 | 3.71e-71 | 229 |
| MS.gene058218.t1 | AT2G16230 | 39.809 | 314 | 180 | 6 | 1 | 306 | 32 | 344 | 4.07e-68 | 221 |
| MS.gene058218.t1 | AT5G20340 | 38.689 | 305 | 176 | 6 | 1 | 300 | 50 | 348 | 1.13e-67 | 216 |
| MS.gene058218.t1 | AT2G26600 | 35.350 | 314 | 194 | 6 | 1 | 306 | 41 | 353 | 2.61e-67 | 216 |
| MS.gene058218.t1 | AT5G20330 | 39.344 | 305 | 174 | 6 | 1 | 300 | 41 | 339 | 4.31e-66 | 211 |
| MS.gene058218.t1 | AT3G15800 | 36.036 | 333 | 201 | 8 | 1 | 323 | 50 | 380 | 1.28e-64 | 209 |
| MS.gene058218.t1 | AT1G33220 | 39.236 | 288 | 164 | 6 | 1 | 283 | 41 | 322 | 4.63e-64 | 206 |
| MS.gene058218.t1 | AT2G05790 | 38.558 | 319 | 183 | 8 | 1 | 309 | 32 | 347 | 3.39e-63 | 207 |
| MS.gene058218.t1 | AT4G26830 | 37.082 | 329 | 190 | 9 | 1 | 318 | 36 | 358 | 3.52e-63 | 207 |
| MS.gene058218.t1 | AT4G26830 | 37.082 | 329 | 190 | 9 | 1 | 318 | 32 | 354 | 4.46e-63 | 207 |
| MS.gene058218.t1 | AT5G55180 | 37.771 | 323 | 180 | 10 | 1 | 309 | 34 | 349 | 1.06e-62 | 206 |
| MS.gene058218.t1 | AT5G55180 | 37.771 | 323 | 180 | 10 | 1 | 309 | 34 | 349 | 1.29e-62 | 206 |
| MS.gene058218.t1 | AT5G42720 | 36.991 | 319 | 191 | 7 | 2 | 311 | 34 | 351 | 1.74e-61 | 202 |
| MS.gene058218.t1 | AT4G34480 | 39.241 | 316 | 181 | 7 | 1 | 307 | 33 | 346 | 7.21e-61 | 198 |
| MS.gene058218.t1 | AT5G20560 | 37.209 | 301 | 179 | 6 | 1 | 296 | 41 | 336 | 1.22e-60 | 197 |
| MS.gene058218.t1 | AT1G77790 | 38.835 | 309 | 174 | 7 | 2 | 302 | 38 | 339 | 3.87e-60 | 196 |
| MS.gene058218.t1 | AT4G29360 | 39.432 | 317 | 180 | 7 | 2 | 309 | 45 | 358 | 8.56e-60 | 201 |
| MS.gene058218.t1 | AT4G29360 | 39.432 | 317 | 180 | 7 | 2 | 309 | 35 | 348 | 8.96e-60 | 200 |
| MS.gene058218.t1 | AT1G32860 | 36.164 | 318 | 189 | 8 | 1 | 307 | 36 | 350 | 1.53e-59 | 197 |
| MS.gene058218.t1 | AT4G34480 | 39.241 | 316 | 181 | 7 | 1 | 307 | 33 | 346 | 2.60e-59 | 198 |
| MS.gene058218.t1 | AT2G01630 | 36.697 | 327 | 190 | 8 | 4 | 318 | 33 | 354 | 3.15e-58 | 192 |
| MS.gene058218.t1 | AT5G42100 | 38.679 | 318 | 178 | 9 | 1 | 305 | 34 | 347 | 5.30e-58 | 193 |
| MS.gene058218.t1 | AT5G42100 | 37.975 | 316 | 183 | 8 | 1 | 305 | 34 | 347 | 5.33e-58 | 193 |
| MS.gene058218.t1 | AT2G01630 | 36.585 | 328 | 191 | 8 | 3 | 318 | 32 | 354 | 7.23e-58 | 193 |
| MS.gene058218.t1 | AT1G11820 | 35.220 | 318 | 191 | 8 | 3 | 308 | 53 | 367 | 2.11e-57 | 190 |
| MS.gene058218.t1 | AT2G01630 | 36.697 | 327 | 190 | 8 | 4 | 318 | 33 | 354 | 3.35e-57 | 193 |
| MS.gene058218.t1 | AT1G11820 | 35.220 | 318 | 191 | 8 | 3 | 308 | 53 | 367 | 1.20e-56 | 191 |
| MS.gene058218.t1 | AT1G11820 | 35.110 | 319 | 192 | 8 | 3 | 309 | 53 | 368 | 2.25e-56 | 191 |
| MS.gene058218.t1 | AT3G07320 | 33.846 | 325 | 193 | 9 | 1 | 309 | 32 | 350 | 1.30e-55 | 187 |
| MS.gene058218.t1 | AT3G61810 | 36.164 | 318 | 183 | 8 | 2 | 307 | 63 | 372 | 2.09e-55 | 185 |
| MS.gene058218.t1 | AT5G58090 | 35.202 | 321 | 194 | 9 | 5 | 315 | 34 | 350 | 3.57e-55 | 187 |
| MS.gene058218.t1 | AT5G24318 | 37.460 | 315 | 181 | 10 | 1 | 305 | 37 | 345 | 5.33e-55 | 184 |
| MS.gene058218.t1 | AT2G27500 | 32.911 | 316 | 203 | 6 | 1 | 308 | 36 | 350 | 1.02e-54 | 183 |
| MS.gene058218.t1 | AT2G27500 | 32.911 | 316 | 203 | 6 | 1 | 308 | 36 | 350 | 2.06e-54 | 182 |
| MS.gene058218.t1 | AT1G77780 | 36.393 | 305 | 184 | 7 | 2 | 302 | 32 | 330 | 2.24e-54 | 182 |
| MS.gene058218.t1 | AT5G24318 | 37.460 | 315 | 181 | 10 | 1 | 305 | 37 | 345 | 2.53e-54 | 184 |
| MS.gene058218.t1 | AT5G24318 | 37.460 | 315 | 181 | 10 | 1 | 305 | 37 | 345 | 3.91e-54 | 184 |
| MS.gene058218.t1 | AT2G26600 | 36.154 | 260 | 157 | 6 | 55 | 306 | 1 | 259 | 1.23e-53 | 178 |
| MS.gene058218.t1 | AT1G66250 | 36.129 | 310 | 186 | 6 | 3 | 302 | 41 | 348 | 1.57e-53 | 183 |
| MS.gene058218.t1 | AT1G30080 | 35.144 | 313 | 193 | 7 | 1 | 305 | 43 | 353 | 2.75e-53 | 179 |
| MS.gene058218.t1 | AT1G30080 | 35.463 | 313 | 192 | 7 | 1 | 305 | 43 | 353 | 5.30e-53 | 179 |
| MS.gene058218.t1 | AT4G18340 | 35.312 | 320 | 187 | 8 | 1 | 307 | 41 | 353 | 1.06e-52 | 178 |
| MS.gene058218.t1 | AT4G18340 | 34.593 | 344 | 201 | 9 | 1 | 327 | 41 | 377 | 2.06e-52 | 177 |
| MS.gene058218.t1 | AT4G17180 | 35.390 | 308 | 183 | 7 | 9 | 307 | 40 | 340 | 4.05e-52 | 179 |
| MS.gene058218.t1 | AT4G31140 | 34.405 | 311 | 194 | 6 | 5 | 307 | 39 | 347 | 1.23e-50 | 175 |
| MS.gene058218.t1 | AT5G18220 | 33.333 | 321 | 202 | 7 | 5 | 317 | 42 | 358 | 1.26e-50 | 175 |
| MS.gene058218.t1 | AT2G19440 | 32.927 | 328 | 206 | 9 | 5 | 322 | 33 | 356 | 2.12e-49 | 172 |
| MS.gene058218.t1 | AT2G19440 | 32.927 | 328 | 206 | 9 | 5 | 322 | 33 | 356 | 2.12e-49 | 172 |
| MS.gene058218.t1 | AT3G13560 | 33.654 | 312 | 192 | 8 | 4 | 303 | 36 | 344 | 9.98e-49 | 170 |
| MS.gene058218.t1 | AT3G13560 | 33.654 | 312 | 192 | 8 | 4 | 303 | 36 | 344 | 9.98e-49 | 170 |
| MS.gene058218.t1 | AT3G13560 | 33.654 | 312 | 192 | 8 | 4 | 303 | 36 | 344 | 9.98e-49 | 170 |
| MS.gene058218.t1 | AT3G13560 | 33.654 | 312 | 192 | 8 | 4 | 303 | 36 | 344 | 9.98e-49 | 170 |
| MS.gene058218.t1 | AT3G13560 | 33.654 | 312 | 192 | 8 | 4 | 303 | 36 | 344 | 9.98e-49 | 170 |
| MS.gene058218.t1 | AT3G46570 | 39.432 | 317 | 173 | 13 | 1 | 305 | 34 | 343 | 1.02e-48 | 167 |
| MS.gene058218.t1 | AT4G14080 | 32.500 | 320 | 201 | 9 | 2 | 309 | 50 | 366 | 1.65e-48 | 169 |
| MS.gene058218.t1 | AT3G55430 | 36.562 | 320 | 184 | 14 | 4 | 313 | 38 | 348 | 9.71e-48 | 167 |
| MS.gene058218.t1 | AT5G20870 | 33.022 | 321 | 198 | 8 | 5 | 310 | 42 | 360 | 2.81e-47 | 166 |
| MS.gene058218.t1 | AT5G64790 | 32.476 | 311 | 197 | 7 | 9 | 309 | 43 | 350 | 3.81e-47 | 166 |
| MS.gene058218.t1 | AT3G23770 | 33.538 | 325 | 200 | 9 | 1 | 311 | 44 | 366 | 7.86e-47 | 165 |
| MS.gene058218.t1 | AT5G58480 | 33.654 | 312 | 193 | 7 | 5 | 306 | 38 | 345 | 1.30e-46 | 164 |
| MS.gene058218.t1 | AT1G64760 | 32.198 | 323 | 205 | 9 | 5 | 317 | 37 | 355 | 1.40e-46 | 164 |
| MS.gene058218.t1 | AT1G64760 | 32.198 | 323 | 205 | 9 | 5 | 317 | 37 | 355 | 1.40e-46 | 164 |
| MS.gene058218.t1 | AT3G04010 | 33.232 | 328 | 204 | 8 | 1 | 317 | 40 | 363 | 1.95e-46 | 164 |
| MS.gene058218.t1 | AT2G27500 | 32.601 | 273 | 175 | 6 | 44 | 308 | 1 | 272 | 4.91e-45 | 156 |
| MS.gene058218.t1 | AT3G24330 | 30.841 | 321 | 211 | 7 | 1 | 311 | 46 | 365 | 8.02e-44 | 157 |
| MS.gene058218.t1 | AT2G39640 | 33.117 | 308 | 193 | 10 | 4 | 305 | 39 | 339 | 5.53e-41 | 150 |
| MS.gene058218.t1 | AT3G55780 | 32.817 | 323 | 195 | 13 | 19 | 325 | 60 | 376 | 1.02e-38 | 141 |
| MS.gene058218.t1 | AT4G34480 | 40.000 | 235 | 130 | 7 | 82 | 307 | 3 | 235 | 1.99e-35 | 132 |
| MS.gene058218.t1 | AT5G24318 | 38.278 | 209 | 116 | 7 | 106 | 305 | 2 | 206 | 1.50e-32 | 123 |
Find 89 sgRNAs with CRISPR-Local
Find 100 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTATTGACATGACCCTTAT+TGG | 0.130417 | 2.4:-56226702 | MS.gene058218:CDS |
| TTATCGCTTGATATATATTT+TGG | 0.139583 | 2.4:+56226763 | None:intergenic |
| CCAGAATTGGAGAAACATTT+TGG | 0.146550 | 2.4:-56226225 | MS.gene058218:CDS |
| AAAGAAATGTATTGAATTTC+TGG | 0.164011 | 2.4:-56226878 | MS.gene058218:CDS |
| CCAAAATGTTTCTCCAATTC+TGG | 0.169992 | 2.4:+56226225 | None:intergenic |
| TCTCCAATTCTGGACTCTTT+TGG | 0.221583 | 2.4:+56226235 | None:intergenic |
| AGGCTTTGAAGGTCGGAATT+TGG | 0.262776 | 2.4:+56226936 | None:intergenic |
| TTACCAACATGGCTAAAATA+AGG | 0.277500 | 2.4:+56226567 | None:intergenic |
| TCAGGCATTGAACTCATTCT+TGG | 0.314744 | 2.4:-56226963 | MS.gene058218:CDS |
| GTCCAGTTGGAGGCTCTTCT+TGG | 0.315991 | 2.4:-56226812 | MS.gene058218:CDS |
| AAGAAGTACCCATTTGGATT+TGG | 0.328985 | 2.4:-56226180 | MS.gene058218:CDS |
| TTTCTAAAAGAACCTTTAGA+TGG | 0.332211 | 2.4:+56226666 | None:intergenic |
| ACATAGCATCAAATAAGTTT+TGG | 0.363057 | 2.4:+56226469 | None:intergenic |
| CTAAACGCATTAAGAAATTC+AGG | 0.364769 | 2.4:-56226981 | MS.gene058218:CDS |
| AACCGATCCCAGTGTTATCT+AGG | 0.365306 | 2.4:+56226427 | None:intergenic |
| TTTCACTTCACCGGGTGTTA+TGG | 0.366594 | 2.4:-56226514 | MS.gene058218:CDS |
| GCGTTTAGAGCAGCTTGATT+AGG | 0.366865 | 2.4:+56226996 | None:intergenic |
| GGATTTGGTGGGGAAAGAAA+TGG | 0.371102 | 2.4:-56226165 | MS.gene058218:CDS |
| GATTTGGTGGGGAAAGAAAT+GGG | 0.380181 | 2.4:-56226164 | MS.gene058218:CDS |
| AGACCCTTTCATTGGATACT+TGG | 0.388329 | 2.4:-56226625 | MS.gene058218:CDS |
| AGATCTATAACTTCATTTGC+TGG | 0.397526 | 2.4:+56227059 | None:intergenic |
| AAGGTACTCCACGAAGGCCT+TGG | 0.400880 | 2.4:-56226296 | MS.gene058218:CDS |
| AGTTGGTGGCTAGGCTTTGA+AGG | 0.409122 | 2.4:+56226925 | None:intergenic |
| AAACAAAAGAAGTACCCATT+TGG | 0.414004 | 2.4:-56226186 | MS.gene058218:CDS |
| GAGGGAATGAGTTTCCAATA+AGG | 0.416360 | 2.4:+56226688 | None:intergenic |
| ATGGTACAAGATGGTCCAAA+TGG | 0.420545 | 2.4:-56226495 | MS.gene058218:CDS |
| GAACCAAAAGAGTCCAGAAT+TGG | 0.421071 | 2.4:-56226238 | MS.gene058218:CDS |
| GCATACCTAGACCCTTTCAT+TGG | 0.423210 | 2.4:-56226633 | MS.gene058218:CDS |
| CTCTGATAATGCACGTCAAT+GGG | 0.427457 | 2.4:-56226904 | MS.gene058218:CDS |
| CTTTCCCCACCAAATCCAAA+TGG | 0.434776 | 2.4:+56226171 | None:intergenic |
| ATTTGATGCTATGTTGGATT+CGG | 0.441997 | 2.4:-56226460 | MS.gene058218:CDS |
| AGCCAAGAAGAGCCTCCAAC+TGG | 0.443730 | 2.4:+56226810 | None:intergenic |
| ACTCTGATAATGCACGTCAA+TGG | 0.445056 | 2.4:-56226905 | MS.gene058218:CDS |
| AAACTTATTTGATGCTATGT+TGG | 0.449549 | 2.4:-56226466 | MS.gene058218:CDS |
| ATTGGATACTTGGTATATGC+AGG | 0.452948 | 2.4:-56226615 | MS.gene058218:CDS |
| TTGATTCGTCATGTTGGTAA+AGG | 0.455676 | 2.4:-56226315 | MS.gene058218:CDS |
| TACCAACATGGCTAAAATAA+GGG | 0.471112 | 2.4:+56226568 | None:intergenic |
| AAGTACCCATTTGGATTTGG+TGG | 0.473093 | 2.4:-56226177 | MS.gene058218:CDS |
| TAGATAACACTGGGATCGGT+TGG | 0.473307 | 2.4:-56226425 | MS.gene058218:CDS |
| AAATCTTCATGATCAAATCA+AGG | 0.476242 | 2.4:-56226733 | MS.gene058218:CDS |
| AACTCATTCCCTCCATCTAA+AGG | 0.483297 | 2.4:-56226678 | MS.gene058218:CDS |
| AGTGGTTGGCCCTCTGATGG+AGG | 0.485939 | 2.4:-56226381 | MS.gene058218:CDS |
| CTAAAAGAACCTTTAGATGG+AGG | 0.496570 | 2.4:+56226669 | None:intergenic |
| TCTGTTGCCCAAGGCCTTCG+TGG | 0.497067 | 2.4:+56226288 | None:intergenic |
| AGGTACTCCACGAAGGCCTT+GGG | 0.499202 | 2.4:-56226295 | MS.gene058218:CDS |
| TAAAAGAACCTTTAGATGGA+GGG | 0.499886 | 2.4:+56226670 | None:intergenic |
| GGGTAAACATTGACAAGTAA+AGG | 0.501897 | 2.4:+56226588 | None:intergenic |
| GAGAGTGGTTGGCCCTCTGA+TGG | 0.506895 | 2.4:-56226384 | MS.gene058218:CDS |
| GTGGTTGGCCCTCTGATGGA+GGG | 0.509372 | 2.4:-56226380 | MS.gene058218:CDS |
| AGTATCCAATGAAAGGGTCT+AGG | 0.510404 | 2.4:+56226628 | None:intergenic |
| AGATAACACTGGGATCGGTT+GGG | 0.511148 | 2.4:-56226424 | MS.gene058218:CDS |
| TATACCAAGTATCCAATGAA+AGG | 0.511220 | 2.4:+56226621 | None:intergenic |
| AATGTTGTTGTATCTGAGAG+TGG | 0.513764 | 2.4:-56226399 | MS.gene058218:CDS |
| AGGGAATGAGTTTCCAATAA+GGG | 0.515316 | 2.4:+56226689 | None:intergenic |
| TTTCCCCACCAAATCCAAAT+GGG | 0.522115 | 2.4:+56226172 | None:intergenic |
| CATTATCAGAGTTGGTGGCT+AGG | 0.533624 | 2.4:+56226916 | None:intergenic |
| AGTACCCATTTGGATTTGGT+GGG | 0.536863 | 2.4:-56226176 | MS.gene058218:CDS |
| ACGTGCATTATCAGAGTTGG+TGG | 0.536916 | 2.4:+56226911 | None:intergenic |
| AAAATCAAGTATATTGCAGT+TGG | 0.537070 | 2.4:-56226846 | MS.gene058218:CDS |
| GGTGAAGTGAAAAGAGCATA+AGG | 0.538337 | 2.4:+56226525 | None:intergenic |
| GGTGGCTAGGCTTTGAAGGT+CGG | 0.549115 | 2.4:+56226929 | None:intergenic |
| TTGACGTGCATTATCAGAGT+TGG | 0.556118 | 2.4:+56226908 | None:intergenic |
| CATGACGAATCAAATTATCA+AGG | 0.559453 | 2.4:+56226325 | None:intergenic |
| GATAATTTGATTCGTCATGT+TGG | 0.559706 | 2.4:-56226321 | MS.gene058218:CDS |
| ATACCAAGTATCCAATGAAA+GGG | 0.561847 | 2.4:+56226622 | None:intergenic |
| GCCCTAGATAACACTGGGAT+CGG | 0.564508 | 2.4:-56226429 | MS.gene058218:CDS |
| AGAAATGGGGAAATTGTCAA+TGG | 0.564590 | 2.4:-56226150 | MS.gene058218:CDS |
| TGGTACAAGATGGTCCAAAT+GGG | 0.565640 | 2.4:-56226494 | MS.gene058218:CDS |
| ACCGATCCCAGTGTTATCTA+GGG | 0.565705 | 2.4:+56226428 | None:intergenic |
| ATATAAGTTTCTGTTGCCCA+AGG | 0.574099 | 2.4:+56226279 | None:intergenic |
| GTACCCATTTGGATTTGGTG+GGG | 0.578076 | 2.4:-56226175 | MS.gene058218:CDS |
| TATCACGCGGGTTACCAACA+TGG | 0.578879 | 2.4:+56226556 | None:intergenic |
| AGTAGCCGCCCCTCCATCAG+AGG | 0.578903 | 2.4:+56226371 | None:intergenic |
| ATTTGGTGGGGAAAGAAATG+GGG | 0.581919 | 2.4:-56226163 | MS.gene058218:CDS |
| CCATCTTGTACCATAACACC+CGG | 0.586536 | 2.4:+56226504 | None:intergenic |
| TTGTTGTATCTGAGAGTGGT+TGG | 0.587177 | 2.4:-56226395 | MS.gene058218:CDS |
| TGGTTGGCCCTCTGATGGAG+GGG | 0.589912 | 2.4:-56226379 | MS.gene058218:CDS |
| GGTAATGAAGTAAGTCCAGT+TGG | 0.594555 | 2.4:-56226825 | MS.gene058218:CDS |
| CATGCAGCCCTAGATAACAC+TGG | 0.595342 | 2.4:-56226435 | MS.gene058218:CDS |
| CCGGGTGTTATGGTACAAGA+TGG | 0.614761 | 2.4:-56226504 | MS.gene058218:CDS |
| TTGGCCCTCTGATGGAGGGG+CGG | 0.614879 | 2.4:-56226376 | MS.gene058218:CDS |
| GTAGCCGCCCCTCCATCAGA+GGG | 0.615453 | 2.4:+56226372 | None:intergenic |
| AATGAAGTAAGTCCAGTTGG+AGG | 0.618951 | 2.4:-56226822 | MS.gene058218:CDS |
| TCTATAACTTCATTTGCTGG+TGG | 0.624995 | 2.4:+56227062 | None:intergenic |
| ATGCAGCCCTAGATAACACT+GGG | 0.632794 | 2.4:-56226434 | MS.gene058218:CDS |
| AATAAGGGTCATGTCAATAG+CGG | 0.686579 | 2.4:+56226704 | None:intergenic |
| TTGGTAAAGGTACTCCACGA+AGG | 0.718049 | 2.4:-56226302 | MS.gene058218:CDS |
| TAAGGAAGAGATATATCACG+CGG | 0.721413 | 2.4:+56226543 | None:intergenic |
| AAGGAAGAGATATATCACGC+GGG | 0.748768 | 2.4:+56226544 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAAATGTATTGAATTTC+TGG | - | chr2.4:56226309-56226328 | MS.gene058218:CDS | 20.0% |
| !!! | TATCGCTTGATATATATTTT+GGG | + | chr2.4:56226426-56226445 | None:intergenic | 20.0% |
| !!! | TTATCGCTTGATATATATTT+TGG | + | chr2.4:56226427-56226446 | None:intergenic | 20.0% |
| !!! | TTCTTTTAGAAATGATGTTA+GGG | - | chr2.4:56226532-56226551 | MS.gene058218:CDS | 20.0% |
| ! | AAAATCAAGTATATTGCAGT+TGG | - | chr2.4:56226341-56226360 | MS.gene058218:CDS | 25.0% |
| ! | AAACTTATTTGATGCTATGT+TGG | - | chr2.4:56226721-56226740 | MS.gene058218:CDS | 25.0% |
| ! | AAATCTTCATGATCAAATCA+AGG | - | chr2.4:56226454-56226473 | MS.gene058218:CDS | 25.0% |
| !! | ACATAGCATCAAATAAGTTT+TGG | + | chr2.4:56226721-56226740 | None:intergenic | 25.0% |
| !! | TTTCTAAAAGAACCTTTAGA+TGG | + | chr2.4:56226524-56226543 | None:intergenic | 25.0% |
| !!! | ATATACTTGATTTTGACACT+AGG | + | chr2.4:56226335-56226354 | None:intergenic | 25.0% |
| !!! | GTTCTTTTAGAAATGATGTT+AGG | - | chr2.4:56226531-56226550 | MS.gene058218:CDS | 25.0% |
| AGATCTATAACTTCATTTGC+TGG | + | chr2.4:56226131-56226150 | None:intergenic | 30.0% | |
| ATACCAAGTATCCAATGAAA+GGG | + | chr2.4:56226568-56226587 | None:intergenic | 30.0% | |
| ATTTGATGCTATGTTGGATT+CGG | - | chr2.4:56226727-56226746 | MS.gene058218:CDS | 30.0% | |
| CATGACGAATCAAATTATCA+AGG | + | chr2.4:56226865-56226884 | None:intergenic | 30.0% | |
| CTAAACGCATTAAGAAATTC+AGG | - | chr2.4:56226206-56226225 | MS.gene058218:CDS | 30.0% | |
| TAAAAGAACCTTTAGATGGA+GGG | + | chr2.4:56226520-56226539 | None:intergenic | 30.0% | |
| TACCAACATGGCTAAAATAA+GGG | + | chr2.4:56226622-56226641 | None:intergenic | 30.0% | |
| TATACCAAGTATCCAATGAA+AGG | + | chr2.4:56226569-56226588 | None:intergenic | 30.0% | |
| TTACCAACATGGCTAAAATA+AGG | + | chr2.4:56226623-56226642 | None:intergenic | 30.0% | |
| ! | GATAATTTGATTCGTCATGT+TGG | - | chr2.4:56226866-56226885 | MS.gene058218:CDS | 30.0% |
| !! | AAACAAAAGAAGTACCCATT+TGG | - | chr2.4:56227001-56227020 | MS.gene058218:CDS | 30.0% |
| !! | AATAAGTTTTGGTACCCATT+TGG | + | chr2.4:56226710-56226729 | None:intergenic | 30.0% |
| !! | GGGTACTTCTTTTGTTTATT+AGG | + | chr2.4:56226998-56227017 | None:intergenic | 30.0% |
| AATAAGGGTCATGTCAATAG+CGG | + | chr2.4:56226486-56226505 | None:intergenic | 35.0% | |
| AATGTTGTTGTATCTGAGAG+TGG | - | chr2.4:56226788-56226807 | MS.gene058218:CDS | 35.0% | |
| AGAAATGGGGAAATTGTCAA+TGG | - | chr2.4:56227037-56227056 | MS.gene058218:CDS | 35.0% | |
| AGGGAATGAGTTTCCAATAA+GGG | + | chr2.4:56226501-56226520 | None:intergenic | 35.0% | |
| ATATAAGTTTCTGTTGCCCA+AGG | + | chr2.4:56226911-56226930 | None:intergenic | 35.0% | |
| ATTGGATACTTGGTATATGC+AGG | - | chr2.4:56226572-56226591 | MS.gene058218:CDS | 35.0% | |
| CCAAAATGTTTCTCCAATTC+TGG | + | chr2.4:56226965-56226984 | None:intergenic | 35.0% | |
| CTAAAAGAACCTTTAGATGG+AGG | + | chr2.4:56226521-56226540 | None:intergenic | 35.0% | |
| GGGTAAACATTGACAAGTAA+AGG | + | chr2.4:56226602-56226621 | None:intergenic | 35.0% | |
| TAAGGAAGAGATATATCACG+CGG | + | chr2.4:56226647-56226666 | None:intergenic | 35.0% | |
| ! | CCAGAATTGGAGAAACATTT+TGG | - | chr2.4:56226962-56226981 | MS.gene058218:CDS | 35.0% |
| ! | TCTATAACTTCATTTGCTGG+TGG | + | chr2.4:56226128-56226147 | None:intergenic | 35.0% |
| ! | TTATGCTCTTTTCACTTCAC+CGG | - | chr2.4:56226664-56226683 | MS.gene058218:CDS | 35.0% |
| ! | TTGATTCGTCATGTTGGTAA+AGG | - | chr2.4:56226872-56226891 | MS.gene058218:CDS | 35.0% |
| !! | AAGAAGTACCCATTTGGATT+TGG | - | chr2.4:56227007-56227026 | MS.gene058218:CDS | 35.0% |
| !! | CGCTTGATATATATTTTGGG+TGG | + | chr2.4:56226423-56226442 | None:intergenic | 35.0% |
| !! | TGATATATATTTTGGGTGGC+AGG | + | chr2.4:56226419-56226438 | None:intergenic | 35.0% |
| !!! | TACCCTTATTTTAGCCATGT+TGG | - | chr2.4:56226617-56226636 | MS.gene058218:CDS | 35.0% |
| AACTCATTCCCTCCATCTAA+AGG | - | chr2.4:56226509-56226528 | MS.gene058218:CDS | 40.0% | |
| AAGGAAGAGATATATCACGC+GGG | + | chr2.4:56226646-56226665 | None:intergenic | 40.0% | |
| AAGTACCCATTTGGATTTGG+TGG | - | chr2.4:56227010-56227029 | MS.gene058218:CDS | 40.0% | |
| AATGAAGTAAGTCCAGTTGG+AGG | - | chr2.4:56226365-56226384 | MS.gene058218:CDS | 40.0% | |
| AGACCCTTTCATTGGATACT+TGG | - | chr2.4:56226562-56226581 | MS.gene058218:CDS | 40.0% | |
| AGTATCCAATGAAAGGGTCT+AGG | + | chr2.4:56226562-56226581 | None:intergenic | 40.0% | |
| ATGGTACAAGATGGTCCAAA+TGG | - | chr2.4:56226692-56226711 | MS.gene058218:CDS | 40.0% | |
| GAACCAAAAGAGTCCAGAAT+TGG | - | chr2.4:56226949-56226968 | MS.gene058218:CDS | 40.0% | |
| GAGGGAATGAGTTTCCAATA+AGG | + | chr2.4:56226502-56226521 | None:intergenic | 40.0% | |
| GCTATTGACATGACCCTTAT+TGG | - | chr2.4:56226485-56226504 | MS.gene058218:CDS | 40.0% | |
| GGTAATGAAGTAAGTCCAGT+TGG | - | chr2.4:56226362-56226381 | MS.gene058218:CDS | 40.0% | |
| TGGTACAAGATGGTCCAAAT+GGG | - | chr2.4:56226693-56226712 | MS.gene058218:CDS | 40.0% | |
| TTGACGTGCATTATCAGAGT+TGG | + | chr2.4:56226282-56226301 | None:intergenic | 40.0% | |
| TTGTTGTATCTGAGAGTGGT+TGG | - | chr2.4:56226792-56226811 | MS.gene058218:CDS | 40.0% | |
| TTTCCCCACCAAATCCAAAT+GGG | + | chr2.4:56227018-56227037 | None:intergenic | 40.0% | |
| ! | ACTCTGATAATGCACGTCAA+TGG | - | chr2.4:56226282-56226301 | MS.gene058218:CDS | 40.0% |
| ! | AGTACCCATTTGGATTTGGT+GGG | - | chr2.4:56227011-56227030 | MS.gene058218:CDS | 40.0% |
| ! | ATTTGGTGGGGAAAGAAATG+GGG | - | chr2.4:56227024-56227043 | MS.gene058218:CDS | 40.0% |
| ! | CTCTGATAATGCACGTCAAT+GGG | - | chr2.4:56226283-56226302 | MS.gene058218:CDS | 40.0% |
| ! | GGTGAAGTGAAAAGAGCATA+AGG | + | chr2.4:56226665-56226684 | None:intergenic | 40.0% |
| ! | TATGCTCTTTTCACTTCACC+GGG | - | chr2.4:56226665-56226684 | MS.gene058218:CDS | 40.0% |
| ! | TCTCCAATTCTGGACTCTTT+TGG | + | chr2.4:56226955-56226974 | None:intergenic | 40.0% |
| !! | GATTTGGTGGGGAAAGAAAT+GGG | - | chr2.4:56227023-56227042 | MS.gene058218:CDS | 40.0% |
| !! | TCAGGCATTGAACTCATTCT+TGG | - | chr2.4:56226224-56226243 | MS.gene058218:CDS | 40.0% |
| AACCGATCCCAGTGTTATCT+AGG | + | chr2.4:56226763-56226782 | None:intergenic | 45.0% | |
| ACCGATCCCAGTGTTATCTA+GGG | + | chr2.4:56226762-56226781 | None:intergenic | 45.0% | |
| ACGTGCATTATCAGAGTTGG+TGG | + | chr2.4:56226279-56226298 | None:intergenic | 45.0% | |
| AGATAACACTGGGATCGGTT+GGG | - | chr2.4:56226763-56226782 | MS.gene058218:CDS | 45.0% | |
| ATGCAGCCCTAGATAACACT+GGG | - | chr2.4:56226753-56226772 | MS.gene058218:CDS | 45.0% | |
| CCATCTTGTACCATAACACC+CGG | + | chr2.4:56226686-56226705 | None:intergenic | 45.0% | |
| CTTTCCCCACCAAATCCAAA+TGG | + | chr2.4:56227019-56227038 | None:intergenic | 45.0% | |
| GCATACCTAGACCCTTTCAT+TGG | - | chr2.4:56226554-56226573 | MS.gene058218:CDS | 45.0% | |
| TAGATAACACTGGGATCGGT+TGG | - | chr2.4:56226762-56226781 | MS.gene058218:CDS | 45.0% | |
| TTTCACTTCACCGGGTGTTA+TGG | - | chr2.4:56226673-56226692 | MS.gene058218:CDS | 45.0% | |
| ! | GCGTTTAGAGCAGCTTGATT+AGG | + | chr2.4:56226194-56226213 | None:intergenic | 45.0% |
| !! | AGGCTTTGAAGGTCGGAATT+TGG | + | chr2.4:56226254-56226273 | None:intergenic | 45.0% |
| !! | CATTATCAGAGTTGGTGGCT+AGG | + | chr2.4:56226274-56226293 | None:intergenic | 45.0% |
| !! | GGATTTGGTGGGGAAAGAAA+TGG | - | chr2.4:56227022-56227041 | MS.gene058218:CDS | 45.0% |
| !! | GTACCCATTTGGATTTGGTG+GGG | - | chr2.4:56227012-56227031 | MS.gene058218:CDS | 45.0% |
| !! | TTGGTAAAGGTACTCCACGA+AGG | - | chr2.4:56226885-56226904 | MS.gene058218:CDS | 45.0% |
| CATGCAGCCCTAGATAACAC+TGG | - | chr2.4:56226752-56226771 | MS.gene058218:CDS | 50.0% | |
| GCCCTAGATAACACTGGGAT+CGG | - | chr2.4:56226758-56226777 | MS.gene058218:CDS | 50.0% | |
| ! | CCGGGTGTTATGGTACAAGA+TGG | - | chr2.4:56226683-56226702 | MS.gene058218:CDS | 50.0% |
| ! | TATCACGCGGGTTACCAACA+TGG | + | chr2.4:56226634-56226653 | None:intergenic | 50.0% |
| !! | AGTTGGTGGCTAGGCTTTGA+AGG | + | chr2.4:56226265-56226284 | None:intergenic | 50.0% |
| AGCCAAGAAGAGCCTCCAAC+TGG | + | chr2.4:56226380-56226399 | None:intergenic | 55.0% | |
| AGGTACTCCACGAAGGCCTT+GGG | - | chr2.4:56226892-56226911 | MS.gene058218:CDS | 55.0% | |
| GTCCAGTTGGAGGCTCTTCT+TGG | - | chr2.4:56226375-56226394 | MS.gene058218:CDS | 55.0% | |
| ! | AAGGTACTCCACGAAGGCCT+TGG | - | chr2.4:56226891-56226910 | MS.gene058218:CDS | 55.0% |
| !! | GGTGGCTAGGCTTTGAAGGT+CGG | + | chr2.4:56226261-56226280 | None:intergenic | 55.0% |
| TCTGTTGCCCAAGGCCTTCG+TGG | + | chr2.4:56226902-56226921 | None:intergenic | 60.0% | |
| ! | AGTGGTTGGCCCTCTGATGG+AGG | - | chr2.4:56226806-56226825 | MS.gene058218:CDS | 60.0% |
| ! | GAGAGTGGTTGGCCCTCTGA+TGG | - | chr2.4:56226803-56226822 | MS.gene058218:CDS | 60.0% |
| ! | GTGGTTGGCCCTCTGATGGA+GGG | - | chr2.4:56226807-56226826 | MS.gene058218:CDS | 60.0% |
| ! | TGGTTGGCCCTCTGATGGAG+GGG | - | chr2.4:56226808-56226827 | MS.gene058218:CDS | 60.0% |
| AGTAGCCGCCCCTCCATCAG+AGG | + | chr2.4:56226819-56226838 | None:intergenic | 65.0% | |
| GTAGCCGCCCCTCCATCAGA+GGG | + | chr2.4:56226818-56226837 | None:intergenic | 65.0% | |
| TTGGCCCTCTGATGGAGGGG+CGG | - | chr2.4:56226811-56226830 | MS.gene058218:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 56226110 | 56227099 | 56226110 | ID=MS.gene058218 |
| chr2.4 | mRNA | 56226110 | 56227099 | 56226110 | ID=MS.gene058218.t1;Parent=MS.gene058218 |
| chr2.4 | exon | 56226110 | 56227099 | 56226110 | ID=MS.gene058218.t1.exon1;Parent=MS.gene058218.t1 |
| chr2.4 | CDS | 56226110 | 56227099 | 56226110 | ID=cds.MS.gene058218.t1;Parent=MS.gene058218.t1 |
| Gene Sequence |
| Protein sequence |
