Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89264.t1 | OTG21243.1 | 52.6 | 228 | 56 | 2 | 5 | 181 | 1 | 227 | 5.00E-55 | 224.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89264.t1 | A0A251UDY0 | 52.6 | 228 | 56 | 2 | 5 | 181 | 1 | 227 | 3.6e-55 | 224.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050710 | MS.gene89264 | 0.822131 | 2.79E-53 | -1.69E-46 |
| MS.gene051552 | MS.gene89264 | 0.825794 | 3.86E-54 | -1.69E-46 |
| MS.gene052606 | MS.gene89264 | 0.811278 | 7.59E-51 | -1.69E-46 |
| MS.gene055157 | MS.gene89264 | 0.818876 | 1.56E-52 | -1.69E-46 |
| MS.gene055158 | MS.gene89264 | 0.855583 | 5.72E-62 | -1.69E-46 |
| MS.gene055159 | MS.gene89264 | 0.869698 | 2.55E-66 | -1.69E-46 |
| MS.gene057356 | MS.gene89264 | 0.802749 | 4.84E-49 | -1.69E-46 |
| MS.gene058418 | MS.gene89264 | 0.817114 | 3.90E-52 | -1.69E-46 |
| MS.gene05960 | MS.gene89264 | 0.820635 | 6.18E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89264.t1 | MTR_7g065210 | 96.460 | 113 | 4 | 0 | 1 | 113 | 1 | 113 | 3.45e-76 | 223 |
| MS.gene89264.t1 | MTR_7g065210 | 97.059 | 68 | 2 | 0 | 114 | 181 | 50 | 117 | 2.77e-43 | 140 |
| MS.gene89264.t1 | MTR_7g065160 | 87.611 | 113 | 14 | 0 | 1 | 113 | 1 | 113 | 1.37e-69 | 207 |
| MS.gene89264.t1 | MTR_7g065160 | 89.706 | 68 | 7 | 0 | 114 | 181 | 50 | 117 | 7.51e-40 | 131 |
| MS.gene89264.t1 | MTR_8g070040 | 45.872 | 109 | 55 | 3 | 7 | 112 | 8 | 115 | 1.07e-21 | 85.5 |
| MS.gene89264.t1 | MTR_8g070040 | 53.623 | 69 | 31 | 1 | 114 | 181 | 52 | 120 | 1.02e-17 | 75.1 |
| MS.gene89264.t1 | MTR_8g070015 | 48.864 | 88 | 43 | 2 | 24 | 110 | 27 | 113 | 2.92e-19 | 79.0 |
| MS.gene89264.t1 | MTR_8g070015 | 50.000 | 62 | 30 | 1 | 114 | 174 | 52 | 113 | 9.13e-13 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89264.t1 | AT3G53980 | 68.889 | 90 | 27 | 1 | 23 | 112 | 21 | 109 | 4.00e-41 | 135 |
| MS.gene89264.t1 | AT3G53980 | 67.647 | 68 | 22 | 0 | 114 | 181 | 47 | 114 | 2.80e-30 | 107 |
| MS.gene89264.t1 | AT3G53980 | 68.889 | 90 | 27 | 1 | 23 | 112 | 21 | 109 | 4.00e-41 | 135 |
| MS.gene89264.t1 | AT3G53980 | 67.647 | 68 | 22 | 0 | 114 | 181 | 47 | 114 | 2.80e-30 | 107 |
| MS.gene89264.t1 | AT5G05960 | 57.798 | 109 | 39 | 2 | 4 | 112 | 10 | 111 | 2.81e-38 | 127 |
| MS.gene89264.t1 | AT5G05960 | 66.176 | 68 | 23 | 0 | 114 | 181 | 49 | 116 | 1.60e-28 | 102 |
| MS.gene89264.t1 | AT2G37870 | 47.115 | 104 | 51 | 3 | 11 | 112 | 9 | 110 | 3.16e-23 | 89.4 |
| MS.gene89264.t1 | AT2G37870 | 49.275 | 69 | 34 | 1 | 114 | 181 | 47 | 115 | 3.67e-16 | 71.2 |
Find 30 sgRNAs with CRISPR-Local
Find 137 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTAAAAGCTTCATTATC+TGG | 0.286546 | 7.1:-37085668 | None:intergenic |
| TAGCAAAGTTACAGCGTTTA+GGG | 0.295883 | 7.1:-37085853 | None:intergenic |
| TAGCAAAGTTGCAGCGTTTA+GGG | 0.296288 | 7.1:-37087748 | None:intergenic |
| GTCCTTGTTGCAGGGATTCA+TGG | 0.338655 | 7.1:+37085608 | MS.gene89264:CDS |
| TTAGCAAAGTTGCAGCGTTT+AGG | 0.339318 | 7.1:-37087749 | None:intergenic |
| TTAGCAAAGTTACAGCGTTT+AGG | 0.343174 | 7.1:-37085854 | None:intergenic |
| CGTCCGCACTTATAACCAAT+GGG | 0.457526 | 7.1:-37085881 | None:intergenic |
| TCAAACGTTGCTAAAATGTC+TGG | 0.462464 | 7.1:+37085803 | MS.gene89264:CDS |
| TCAAACGTTGCTAAAATGTC+TGG | 0.462464 | 7.1:+37087698 | MS.gene89264:CDS |
| ATGAAGATGCTGTGCCTAGT+TGG | 0.489536 | 7.1:+37085578 | MS.gene89264:CDS |
| AACTTTGCTAATCGTCCCAT+TGG | 0.509591 | 7.1:+37087761 | MS.gene89264:CDS |
| ACGTCCGCACTTATAACCAA+TGG | 0.512832 | 7.1:-37085882 | None:intergenic |
| GGGATAGTAACAGCAATTTG+AGG | 0.522424 | 7.1:-37085833 | None:intergenic |
| GGGATAGTAACAGCAATTTG+AGG | 0.522424 | 7.1:-37087728 | None:intergenic |
| AACTTTGCTAATCGCCCCAT+TGG | 0.524057 | 7.1:+37085866 | MS.gene89264:CDS |
| CGTCCGCACTTATAACCAAT+GGG | 0.524534 | 7.1:-37087776 | None:intergenic |
| ACGTCCGCACTTATAACCAA+TGG | 0.525340 | 7.1:-37087777 | None:intergenic |
| GTTGAAAGTGCTGGTGAATG+TGG | 0.534504 | 7.1:+37085632 | MS.gene89264:CDS |
| TCTTGTGCTGCACTTGCACA+AGG | 0.541464 | 7.1:-37085695 | None:intergenic |
| CAAGGACTACAAAACCAACT+AGG | 0.588924 | 7.1:-37085592 | None:intergenic |
| AAAACTGCACAAAGACAACT+TGG | 0.590774 | 7.1:-37085776 | None:intergenic |
| AAAACTGCACAAAGACAACT+TGG | 0.590774 | 7.1:-37087671 | None:intergenic |
| TGTGCTCAGACTAAGAAACT+TGG | 0.591888 | 7.1:+37085746 | MS.gene89264:CDS |
| TGTGCTCAGACTAAGAAACT+TGG | 0.591888 | 7.1:+37087641 | MS.gene89264:CDS |
| CTCCATGAATCCCTGCAACA+AGG | 0.594877 | 7.1:-37085610 | None:intergenic |
| AGTGCTGGTGAATGTGGAAG+AGG | 0.608175 | 7.1:+37085638 | MS.gene89264:CDS |
| ATTCATGGAGTTGAAAGTGC+TGG | 0.616969 | 7.1:+37085623 | MS.gene89264:CDS |
| CGCCCCATTGGTTATAAGTG+CGG | 0.627824 | 7.1:+37085878 | MS.gene89264:CDS |
| CGTCCCATTGGTTATAAGTG+CGG | 0.667176 | 7.1:+37087773 | MS.gene89264:CDS |
| GTCCGCACTTATAACCAATG+GGG | 0.757650 | 7.1:-37085880 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGAGAAATATATTAATAT+AGG | + | chr7.1:37086086-37086105 | MS.gene89264:intron | 10.0% |
| !! | TATATTAATATAGGAAAAAA+AGG | + | chr7.1:37086095-37086114 | MS.gene89264:intron | 10.0% |
| !!! | TTTCATTACATTATTTTTTT+TGG | - | chr7.1:37086452-37086471 | None:intergenic | 10.0% |
| !! | AAATAAAAAAAAATAACACG+TGG | + | chr7.1:37086263-37086282 | MS.gene89264:intron | 15.0% |
| !! | AAGAATAAATATAAACGAAA+TGG | - | chr7.1:37085961-37085980 | None:intergenic | 15.0% |
| !! | TCAATTTGTAATATATGTAA+GGG | - | chr7.1:37087231-37087250 | None:intergenic | 15.0% |
| !!! | AATTTTGTAGTTTTTTTCTT+AGG | - | chr7.1:37086172-37086191 | None:intergenic | 15.0% |
| !!! | AGCTTTTAATAAATAATTGT+TGG | + | chr7.1:37087140-37087159 | MS.gene89264:intron | 15.0% |
| !!! | ATTTTGTAGTTTTTTTCTTA+GGG | - | chr7.1:37086171-37086190 | None:intergenic | 15.0% |
| !!! | TTTTATTTTTAAATTCATGC+AGG | - | chr7.1:37086251-37086270 | None:intergenic | 15.0% |
| !!! | TTTTGTAGTTTTTTTTTCTT+AGG | + | chr7.1:37086376-37086395 | MS.gene89264:intron | 15.0% |
| !! | AACAACAAAAAAATGTGAAA+CGG | + | chr7.1:37086472-37086491 | MS.gene89264:intron | 20.0% |
| !! | AATCAAAAACAACATAACAA+TGG | - | chr7.1:37087410-37087429 | None:intergenic | 20.0% |
| !! | GTCAATTTGTAATATATGTA+AGG | - | chr7.1:37087232-37087251 | None:intergenic | 20.0% |
| !! | TGAGTATACAAACATTATAT+CGG | + | chr7.1:37087255-37087274 | MS.gene89264:intron | 20.0% |
| !! | TTAAAGTAGTAACTTTGATT+TGG | + | chr7.1:37087090-37087109 | MS.gene89264:intron | 20.0% |
| !!! | ATTGTTATGTTGTTTTTGAT+TGG | + | chr7.1:37087409-37087428 | MS.gene89264:intron | 20.0% |
| !!! | CTATTTGTTAATTTTCTTGA+TGG | + | chr7.1:37086535-37086554 | MS.gene89264:intron | 20.0% |
| !!! | TAGATAGTTAAGAGTATTAT+AGG | + | chr7.1:37088004-37088023 | MS.gene89264:intron | 20.0% |
| !!! | TTGTTATGTTGTTTTTGATT+GGG | + | chr7.1:37087410-37087429 | MS.gene89264:intron | 20.0% |
| !!! | TTTGGGTTGTTTTTTATTTT+GGG | + | chr7.1:37087444-37087463 | MS.gene89264:intron | 20.0% |
| !!! | TTTTGTAGTTTTTTTCTTAG+GGG | - | chr7.1:37086170-37086189 | None:intergenic | 20.0% |
| ! | AAAACTACTTACTTCGTAAT+CGG | - | chr7.1:37086915-37086934 | None:intergenic | 25.0% |
| ! | AAATGCTTCCATATCAAAAA+GGG | - | chr7.1:37087561-37087580 | None:intergenic | 25.0% |
| ! | AATAAAACATTCTCTTTCTG+TGG | + | chr7.1:37086776-37086795 | MS.gene89264:intron | 25.0% |
| ! | ACAACGAAAAAAATGTGAAA+CGG | + | chr7.1:37088052-37088071 | MS.gene89264:intron | 25.0% |
| ! | TAAATGCTTCCATATCAAAA+AGG | - | chr7.1:37087562-37087581 | None:intergenic | 25.0% |
| ! | TATCTGCAATAGATAGTTAA+AGG | - | chr7.1:37087961-37087980 | None:intergenic | 25.0% |
| ! | TGCTGAAAACAAACATAAAT+GGG | + | chr7.1:37086631-37086650 | MS.gene89264:intron | 25.0% |
| ! | TTATTATTATACTGTTGGTC+AGG | - | chr7.1:37086991-37087010 | None:intergenic | 25.0% |
| ! | TTGCTGAAAACAAACATAAA+TGG | + | chr7.1:37086630-37086649 | MS.gene89264:intron | 25.0% |
| !! | ACGTGTTATTATTATACTGT+TGG | - | chr7.1:37086996-37087015 | None:intergenic | 25.0% |
| !! | CTATTTGTCAATTTTCTTGA+TGG | + | chr7.1:37088116-37088135 | MS.gene89264:intron | 25.0% |
| !! | TTTCTTGTTTGTTTATAGTG+TGG | + | chr7.1:37086717-37086736 | MS.gene89264:intron | 25.0% |
| !!! | AAGAGAATGTTTTATTCATG+AGG | - | chr7.1:37086772-37086791 | None:intergenic | 25.0% |
| !!! | AGAGAATGTTTTATTCATGA+GGG | - | chr7.1:37086771-37086790 | None:intergenic | 25.0% |
| !!! | GTTTGGGTTGTTTTTTATTT+TGG | + | chr7.1:37087443-37087462 | MS.gene89264:intron | 25.0% |
| !!! | TGTAGTTTTTTTTTCTTAGG+AGG | + | chr7.1:37086379-37086398 | MS.gene89264:intron | 25.0% |
| !!! | TTTGTAGTTTTTTTCTTAGG+GGG | - | chr7.1:37086169-37086188 | None:intergenic | 25.0% |
| AAACAAAACCTACTCGAAAA+AGG | - | chr7.1:37087487-37087506 | None:intergenic | 30.0% | |
| AAATTCCGTTAAAAGATGTG+AGG | + | chr7.1:37086880-37086899 | MS.gene89264:intron | 30.0% | |
| AACAAAACCTACTCGAAAAA+GGG | - | chr7.1:37087486-37087505 | None:intergenic | 30.0% | |
| AATACAACACAACTAAGTTG+TGG | - | chr7.1:37086692-37086711 | None:intergenic | 30.0% | |
| AGCTTAAAAGCTTCATTATC+TGG | - | chr7.1:37085671-37085690 | None:intergenic | 30.0% | |
| GACAACTTAAAAGAAACTGA+GGG | - | chr7.1:37085923-37085942 | None:intergenic | 30.0% | |
| ! | AAGATCCTCACATCTTTTAA+CGG | - | chr7.1:37086888-37086907 | None:intergenic | 30.0% |
| ! | AGCAATTAAGCTTTTAAGCT+AGG | + | chr7.1:37087535-37087554 | MS.gene89264:intron | 30.0% |
| AAAACTGCACAAAGACAACT+TGG | - | chr7.1:37085779-37085798 | None:intergenic | 35.0% | |
| CGACAACTTAAAAGAAACTG+AGG | - | chr7.1:37085924-37085943 | None:intergenic | 35.0% | |
| CTAAAATCACAACTTCGTGA+AGG | - | chr7.1:37086146-37086165 | None:intergenic | 35.0% | |
| GATGCTGTTAGCTACTATTA+TGG | + | chr7.1:37086663-37086682 | MS.gene89264:intron | 35.0% | |
| TAAACTGTCTTCGAACCTTA+AGG | + | chr7.1:37086936-37086955 | MS.gene89264:intron | 35.0% | |
| TAGCAAAGTTACAGCGTTTA+GGG | - | chr7.1:37085856-37085875 | None:intergenic | 35.0% | |
| TCAAACGTTGCTAAAATGTC+TGG | + | chr7.1:37085803-37085822 | MS.gene89264:CDS | 35.0% | |
| TCATGCAGGTGCAAAAAAAT+TGG | - | chr7.1:37086237-37086256 | None:intergenic | 35.0% | |
| TGCTACAGTTGCAAAACTTA+GGG | - | chr7.1:37086198-37086217 | None:intergenic | 35.0% | |
| TGTGGTTTATTTGATGCTCT+TGG | + | chr7.1:37086794-37086813 | MS.gene89264:intron | 35.0% | |
| TTAGCAAAGTTACAGCGTTT+AGG | - | chr7.1:37085857-37085876 | None:intergenic | 35.0% | |
| ! | AAACATTATATCGGTTGCAG+TGG | + | chr7.1:37087264-37087283 | MS.gene89264:intron | 35.0% |
| ! | AATCGCAACTTTGGAAAGTT+AGG | + | chr7.1:37086406-37086425 | MS.gene89264:intron | 35.0% |
| ! | ACTTTCCAAAGTTGCGATTT+TGG | - | chr7.1:37086405-37086424 | None:intergenic | 35.0% |
| ! | ATCGCAACTTTGGAAAGTTA+GGG | + | chr7.1:37086407-37086426 | MS.gene89264:intron | 35.0% |
| ! | TTTTGCAACTGTAGCAGTTT+TGG | + | chr7.1:37086202-37086221 | MS.gene89264:intron | 35.0% |
| !!! | TATTTTTTGCTATCTGCCTG+TGG | + | chr7.1:37087342-37087361 | MS.gene89264:intron | 35.0% |
| AACTTTGCTAATCGTCCCAT+TGG | + | chr7.1:37087761-37087780 | MS.gene89264:CDS | 40.0% | |
| ACCGAGTCAAAATTTGCCTT+GGG | + | chr7.1:37086316-37086335 | MS.gene89264:intron | 40.0% | |
| ACTCTTCCTTGAAAGAGTTG+AGG | + | chr7.1:37086604-37086623 | MS.gene89264:intron | 40.0% | |
| AGCTTACACTCTTCCTTGAA+TGG | + | chr7.1:37086597-37086616 | MS.gene89264:intron | 40.0% | |
| ATCACAACTTCGTGAAGGTT+AGG | - | chr7.1:37086141-37086160 | None:intergenic | 40.0% | |
| ATTGGGTCGTGGTTAAGTTT+GGG | + | chr7.1:37087427-37087446 | MS.gene89264:intron | 40.0% | |
| CAACAACCTCAACTCTTTCA+AGG | - | chr7.1:37086613-37086632 | None:intergenic | 40.0% | |
| CAAGGACTACAAAACCAACT+AGG | - | chr7.1:37085595-37085614 | None:intergenic | 40.0% | |
| CTACAGTTGCAAAACTTAGG+GGG | - | chr7.1:37086196-37086215 | None:intergenic | 40.0% | |
| CTGCTACAGTTGCAAAACTT+AGG | - | chr7.1:37086199-37086218 | None:intergenic | 40.0% | |
| GCTACAGTTGCAAAACTTAG+GGG | - | chr7.1:37086197-37086216 | None:intergenic | 40.0% | |
| GGGATAGTAACAGCAATTTG+AGG | - | chr7.1:37085836-37085855 | None:intergenic | 40.0% | |
| TAGCAAAGTTGCAGCGTTTA+GGG | - | chr7.1:37087751-37087770 | None:intergenic | 40.0% | |
| TCACAACTTCGTGAAGGTTA+GGG | - | chr7.1:37086140-37086159 | None:intergenic | 40.0% | |
| TGTGCTCAGACTAAGAAACT+TGG | + | chr7.1:37085746-37085765 | MS.gene89264:CDS | 40.0% | |
| TTAGCAAAGTTGCAGCGTTT+AGG | - | chr7.1:37087752-37087771 | None:intergenic | 40.0% | |
| ! | AAGCTAGGCCCTTTTTGATA+TGG | + | chr7.1:37087550-37087569 | MS.gene89264:intron | 40.0% |
| ! | AGGTGCAAAAAAATTGGCCT+TGG | - | chr7.1:37086231-37086250 | None:intergenic | 40.0% |
| ! | ATTCATGGAGTTGAAAGTGC+TGG | + | chr7.1:37085623-37085642 | MS.gene89264:CDS | 40.0% |
| ! | GTTTTGTAGTCCTTGTTGCA+GGG | + | chr7.1:37085600-37085619 | MS.gene89264:CDS | 40.0% |
| !! | TGCAAAAAAATTGGCCTTGG+AGG | - | chr7.1:37086228-37086247 | None:intergenic | 40.0% |
| !!! | TGTTGTTTTTGATTGGGTCG+TGG | + | chr7.1:37087416-37087435 | MS.gene89264:intron | 40.0% |
| AACACGTGGCACCTCATATA+GGG | + | chr7.1:37086277-37086296 | MS.gene89264:intron | 45.0% | |
| AACTTTGCTAATCGCCCCAT+TGG | + | chr7.1:37085866-37085885 | MS.gene89264:CDS | 45.0% | |
| ACAACTTCGTGAAGGTTAGG+GGG | - | chr7.1:37086138-37086157 | None:intergenic | 45.0% | |
| ACGTCCGCACTTATAACCAA+TGG | - | chr7.1:37085885-37085904 | None:intergenic | 45.0% | |
| AGAGCTAGTGACGACAGAAA+TGG | - | chr7.1:37087385-37087404 | None:intergenic | 45.0% | |
| AGTGACGACAGAAATGGATC+CGG | - | chr7.1:37087379-37087398 | None:intergenic | 45.0% | |
| ATGAAGATGCTGTGCCTAGT+TGG | + | chr7.1:37085578-37085597 | MS.gene89264:CDS | 45.0% | |
| CACAACTTCGTGAAGGTTAG+GGG | - | chr7.1:37086139-37086158 | None:intergenic | 45.0% | |
| CCGAGTCAAAATTTGCCTTG+GGG | + | chr7.1:37086317-37086336 | MS.gene89264:intron | 45.0% | |
| CGAGTCAAAATTTGCCTTGG+GGG | + | chr7.1:37086318-37086337 | MS.gene89264:intron | 45.0% | |
| CGTCCGCACTTATAACCAAT+GGG | - | chr7.1:37085884-37085903 | None:intergenic | 45.0% | |
| GACCGAGTCAAAATTTGCCT+TGG | + | chr7.1:37086315-37086334 | MS.gene89264:intron | 45.0% | |
| GATTGGGTCGTGGTTAAGTT+TGG | + | chr7.1:37087426-37087445 | MS.gene89264:intron | 45.0% | |
| GTCCGCACTTATAACCAATG+GGG | - | chr7.1:37085883-37085902 | None:intergenic | 45.0% | |
| TAACACGTGGCACCTCATAT+AGG | + | chr7.1:37086276-37086295 | MS.gene89264:intron | 45.0% | |
| TCACCGGTGCAAAACTTAGA+GGG | + | chr7.1:37086350-37086369 | MS.gene89264:intron | 45.0% | |
| ! | CGTCCCATTGGTTATAAGTG+CGG | + | chr7.1:37087773-37087792 | MS.gene89264:CDS | 45.0% |
| !! | GGTTTTGTAGTCCTTGTTGC+AGG | + | chr7.1:37085599-37085618 | MS.gene89264:CDS | 45.0% |
| !! | GTTGAAAGTGCTGGTGAATG+TGG | + | chr7.1:37085632-37085651 | MS.gene89264:CDS | 45.0% |
| !! | TTTTGCACCGGTGACAGTTT+TGG | - | chr7.1:37086344-37086363 | None:intergenic | 45.0% |
| !!! | CCCCAAGGCAAATTTTGACT+CGG | - | chr7.1:37086320-37086339 | None:intergenic | 45.0% |
| !!! | TTTTGGGTTGTCTTCGAGCT+AGG | + | chr7.1:37087460-37087479 | MS.gene89264:intron | 45.0% |
| !! | ATAATAATAATTTACATATA+GGG | + | chr7.1:37087029-37087048 | MS.gene89264:intron | 5.0% |
| !! | TATAATAATAATTTACATAT+AGG | + | chr7.1:37087028-37087047 | MS.gene89264:intron | 5.0% |
| ATTGCTCAGCAGTCGACATG+TGG | - | chr7.1:37087521-37087540 | None:intergenic | 50.0% | |
| CAGAAATGGATCCGGATCGA+AGG | - | chr7.1:37087371-37087390 | None:intergenic | 50.0% | |
| CCTTAAGGCTTTCTCTAGCC+CGG | + | chr7.1:37086951-37086970 | MS.gene89264:intron | 50.0% | |
| CTCCATGAATCCCTGCAACA+AGG | - | chr7.1:37085613-37085632 | None:intergenic | 50.0% | |
| CTGATGTGGCACCCTATATG+AGG | - | chr7.1:37086291-37086310 | None:intergenic | 50.0% | |
| GGAGGCCAAAATCGCAACTT+TGG | + | chr7.1:37086397-37086416 | MS.gene89264:intron | 50.0% | |
| GTCACCGGTGCAAAACTTAG+AGG | + | chr7.1:37086349-37086368 | MS.gene89264:intron | 50.0% | |
| GTCCTTGTTGCAGGGATTCA+TGG | + | chr7.1:37085608-37085627 | MS.gene89264:CDS | 50.0% | |
| GTGTACACAAGTGAGCTGCT+AGG | - | chr7.1:37086749-37086768 | None:intergenic | 50.0% | |
| TACTGTTGGTCAGGTCCTGA+AGG | - | chr7.1:37086982-37087001 | None:intergenic | 50.0% | |
| TCAGCAGTCGACATGTGGAA+AGG | - | chr7.1:37087516-37087535 | None:intergenic | 50.0% | |
| TCTTGTGCTGCACTTGCACA+AGG | - | chr7.1:37085698-37085717 | None:intergenic | 50.0% | |
| ! | CGCCCCATTGGTTATAAGTG+CGG | + | chr7.1:37085878-37085897 | MS.gene89264:CDS | 50.0% |
| !! | AGTGCTGGTGAATGTGGAAG+AGG | + | chr7.1:37085638-37085657 | MS.gene89264:CDS | 50.0% |
| !! | TGTAGCAGTTTTGGCCTCCA+AGG | + | chr7.1:37086211-37086230 | MS.gene89264:intron | 50.0% |
| !!! | AGCTAGGCCCTTTTTCGAGT+AGG | + | chr7.1:37087476-37087495 | MS.gene89264:intron | 50.0% |
| CCGGTGCAAAACTTAGAGGG+CGG | + | chr7.1:37086353-37086372 | MS.gene89264:intron | 55.0% | |
| TCAGGTCCTGAAGGCTCATC+CGG | - | chr7.1:37086973-37086992 | None:intergenic | 55.0% | |
| TTGGGGGCCAAAACTGTCAC+CGG | + | chr7.1:37086334-37086353 | MS.gene89264:intron | 55.0% | |
| ! | CCGCCCTCTAAGTTTTGCAC+CGG | - | chr7.1:37086356-37086375 | None:intergenic | 55.0% |
| ! | CCGGGCTAGAGAAAGCCTTA+AGG | - | chr7.1:37086954-37086973 | None:intergenic | 55.0% |
| !! | TGACTCGGTCTACGCTGATG+TGG | - | chr7.1:37086305-37086324 | None:intergenic | 55.0% |
| CAGGTCCTGAAGGCTCATCC+GGG | - | chr7.1:37086972-37086991 | None:intergenic | 60.0% | |
| GCCTGTGGTGACCTTCGATC+CGG | + | chr7.1:37087357-37087376 | MS.gene89264:intron | 60.0% | |
| TCCGGATCGAAGGTCACCAC+AGG | - | chr7.1:37087361-37087380 | None:intergenic | 60.0% | |
| TCTAGCCCGGATGAGCCTTC+AGG | + | chr7.1:37086964-37086983 | MS.gene89264:intron | 60.0% | |
| !! | GGTGACAGTTTTGGCCCCCA+AGG | - | chr7.1:37086335-37086354 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 37085566 | 37088196 | 37085566 | ID=MS.gene89264 |
| chr7.1 | mRNA | 37085566 | 37088196 | 37085566 | ID=MS.gene89264.t1;Parent=MS.gene89264 |
| chr7.1 | exon | 37085566 | 37085902 | 37085566 | ID=MS.gene89264.t1.exon1;Parent=MS.gene89264.t1 |
| chr7.1 | CDS | 37085566 | 37085902 | 37085566 | ID=cds.MS.gene89264.t1;Parent=MS.gene89264.t1 |
| chr7.1 | exon | 37087606 | 37087797 | 37087606 | ID=MS.gene89264.t1.exon2;Parent=MS.gene89264.t1 |
| chr7.1 | CDS | 37087606 | 37087797 | 37087606 | ID=cds.MS.gene89264.t1;Parent=MS.gene89264.t1 |
| chr7.1 | exon | 37088180 | 37088196 | 37088180 | ID=MS.gene89264.t1.exon3;Parent=MS.gene89264.t1 |
| chr7.1 | CDS | 37088180 | 37088196 | 37088180 | ID=cds.MS.gene89264.t1;Parent=MS.gene89264.t1 |
| Gene Sequence |
| Protein sequence |
