AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene89296

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89296.t1 MTR_8g106170 78.086 794 84 9 11 719 16 804 0.0 1036
MS.gene89296.t1 MTR_7g063860 67.834 457 72 6 307 719 2 427 1.43e-145 432
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89296.t1 AT1G14650 61.028 798 215 17 1 719 5 785 0.0 783
MS.gene89296.t1 AT1G14650 61.028 798 215 17 1 719 5 785 0.0 783
MS.gene89296.t1 AT1G14650 61.028 798 215 17 1 719 5 785 0.0 783
MS.gene89296.t1 AT1G14640 54.677 759 239 17 1 682 5 735 0.0 645
MS.gene89296.t1 AT1G14640 54.677 759 239 17 1 682 5 735 0.0 645
MS.gene89296.t1 AT4G16200 33.835 266 110 7 33 232 10 275 2.95e-31 124
MS.gene89296.t1 AT5G06520 33.333 252 119 9 34 281 391 597 4.18e-30 127
MS.gene89296.t1 AT5G06520 34.146 164 85 5 149 310 79 221 1.21e-13 75.1
MS.gene89296.t1 AT5G12280 51.128 133 57 3 578 710 293 417 6.94e-30 123
MS.gene89296.t1 AT5G12280 30.220 182 91 4 40 220 89 235 4.05e-12 69.3
MS.gene89296.t1 AT5G06890 57.333 75 20 3 637 710 2 65 2.99e-16 73.9
MS.gene89296.t1 AT3G49130 35.849 159 80 6 136 292 39 177 1.78e-13 72.4
MS.gene89296.t1 AT2G43960 27.376 263 155 9 40 292 9 245 2.94e-13 73.2
MS.gene89296.t1 AT1G18050 45.000 60 33 0 41 100 147 206 9.81e-11 62.8

Find 233 sgRNAs with CRISPR-Local

Find 266 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTCGGTTTGTTGCTAAAA+TGG 0.090737 7.1:-37731871 MS.gene89296:CDS
CAGAGTGGTTTCTCGAATTT+TGG 0.158981 7.1:+37730771 None:intergenic
TGCTTCTGCCTCTTTGGTTC+TGG 0.233634 7.1:+37730205 None:intergenic
TGTTCTGACATCTCACTAAT+TGG 0.272974 7.1:+37730850 None:intergenic
TCGTCATGCTTCTGCCTCTT+TGG 0.289114 7.1:+37730199 None:intergenic
AGAAACCTAAGCAGGTTATA+TGG 0.290616 7.1:-37730624 MS.gene89296:CDS
TTGGTTTCATGAAATGAAAT+TGG 0.291074 7.1:+37731463 None:intergenic
ACTTGTCAATCCTGTCAAAA+AGG 0.309455 7.1:+37731503 None:intergenic
GGATCAAGTACTTTCTTTAC+TGG 0.315349 7.1:+37731630 None:intergenic
GCTTCCTCAGGTGGCGGCGG+TGG 0.315832 7.1:+37730250 None:intergenic
GAAATTCCTTGGTTATTCAT+AGG 0.317603 7.1:+37730400 None:intergenic
CTCAATTTCTGCTTGTTAGC+AGG 0.319229 7.1:+37729995 None:intergenic
CACAATTTGTGGCTCGTAAT+GGG 0.323408 7.1:-37731530 MS.gene89296:CDS
CTTCCTCAGGTGGCGGCGGT+GGG 0.323761 7.1:+37730251 None:intergenic
TGGTTTCATGAAATGAAATT+GGG 0.327351 7.1:+37731464 None:intergenic
TCTTTCTGTTCTTTGTACTT+AGG 0.329702 7.1:+37730805 None:intergenic
ATTGGAAGGCCAATGCTATT+AGG 0.334626 7.1:+37730550 None:intergenic
CTCTTTGGTTCTGGTTCCTC+TGG 0.335577 7.1:+37730214 None:intergenic
AGCTTCTCTGTCAACCCCTT+TGG 0.339349 7.1:+37731378 None:intergenic
TCCATTTCTACTTCCTTCCC+TGG 0.346519 7.1:+37731087 None:intergenic
TGGTTATTCATAGGAATTGA+TGG 0.349393 7.1:+37730409 None:intergenic
ACATCGATACTATCAGTTTC+CGG 0.350605 7.1:+37731693 None:intergenic
CCTCCCACTGATGGAAATCT+TGG 0.352504 7.1:-37731999 MS.gene89296:CDS
TTAAACCGGGCAGAAATATC+AGG 0.353449 7.1:+37731654 None:intergenic
AGATTTCCTTCATCAACATT+AGG 0.356214 7.1:+37730106 None:intergenic
GATGGGAGAAACCGCAAAAT+TGG 0.357100 7.1:+37730888 None:intergenic
TAAATTTCTGTCTCAGCATC+AGG 0.368249 7.1:-37730155 MS.gene89296:CDS
CTTTCTTTACTGGTTTAAAC+CGG 0.371124 7.1:+37731640 None:intergenic
AAGGGAAGAATAGTGAAGTC+AGG 0.376115 7.1:-37730996 MS.gene89296:CDS
CATTCCCTCTTCAACAGGTT+GGG 0.378054 7.1:+37731047 None:intergenic
AAATCTCAAAGGACAAGTTC+TGG 0.387127 7.1:-37730089 MS.gene89296:CDS
GCCACACACACTAGAACTAT+TGG 0.387802 7.1:-37731939 MS.gene89296:CDS
GTGCTGGTAATATGCATGAT+AGG 0.389377 7.1:+37731773 None:intergenic
AGAGGTTTCCAATGCTGTTA+AGG 0.406420 7.1:-37730671 MS.gene89296:CDS
CTCCCACTGATGGAAATCTT+GGG 0.407306 7.1:-37731998 MS.gene89296:CDS
ACTAGAGCAAGCTAGGAAAA+TGG 0.413948 7.1:-37731289 MS.gene89296:CDS
AAAGCTTACAACACAATTTG+TGG 0.416193 7.1:-37731541 MS.gene89296:CDS
ATGTGCATGTCTGGCCTTGG+TGG 0.417712 7.1:+37730523 None:intergenic
GCTCTCATTCCCTCTTCAAC+AGG 0.418328 7.1:+37731042 None:intergenic
GATTGCATCATGTGCATGTC+TGG 0.418515 7.1:+37730514 None:intergenic
TCTGCAGGAAGCCTGTCTTC+TGG 0.418705 7.1:+37730922 None:intergenic
TAATACTGTATGTTATGTAT+AGG 0.419122 7.1:+37730577 None:intergenic
AAGAATCTAAACCGCCGATC+AGG 0.419757 7.1:-37730966 MS.gene89296:CDS
TGTGCATGTCTGGCCTTGGT+GGG 0.420984 7.1:+37730524 None:intergenic
TCCTCCCTTGTAATACCTTC+AGG 0.423377 7.1:+37731576 None:intergenic
ATCACCTCCTCAAGGGTCAT+TGG 0.426170 7.1:+37731153 None:intergenic
TCATTCCCTCTTCAACAGGT+TGG 0.426660 7.1:+37731046 None:intergenic
GGGAATGAGAGCTGCTGGCT+TGG 0.426663 7.1:-37731031 MS.gene89296:CDS
ACTCCTTGAGGCGGAGGTGG+TGG 0.429322 7.1:+37730277 None:intergenic
TTCTCTGTCAACCCCTTTGG+AGG 0.429998 7.1:+37731381 None:intergenic
TGCATGTCTGGCCTTGGTGG+GGG 0.432536 7.1:+37730526 None:intergenic
CTTGCACATTACAATGTTAG+TGG 0.432552 7.1:-37729938 MS.gene89296:CDS
AAAGGTCGTGGAACAGGAAC+AGG 0.432624 7.1:+37730346 None:intergenic
GGAGGTGGTGGATGCATCAT+AGG 0.433352 7.1:+37730289 None:intergenic
TCTCGGTTTGTTGCTAAAAT+GGG 0.433959 7.1:-37731870 MS.gene89296:CDS
TGGAATCAGTTCACCGGTGA+TGG 0.436958 7.1:+37730870 None:intergenic
GATCGGCGGTTTAGATTCTT+CGG 0.445072 7.1:+37730969 None:intergenic
TACAAATGGCTATGGTTGAT+TGG 0.445085 7.1:-37731239 MS.gene89296:CDS
CCATCCCATATAACCTGCTT+AGG 0.446463 7.1:+37730619 None:intergenic
ACACAATTTGTGGCTCGTAA+TGG 0.446772 7.1:-37731531 MS.gene89296:CDS
TTCTGGTTCCTCTGGAAGCA+AGG 0.447846 7.1:+37730222 None:intergenic
ATCATGTGCATGTCTGGCCT+TGG 0.449917 7.1:+37730520 None:intergenic
CGATCAGGATTGTGAAGAAC+TGG 0.450303 7.1:-37730951 MS.gene89296:CDS
GATACTCCTTGAGGCGGAGG+TGG 0.455624 7.1:+37730274 None:intergenic
AGGTATTACAAGGGAGGAGC+TGG 0.455882 7.1:-37731571 MS.gene89296:CDS
GGAACAAAAGGTCGTGGAAC+AGG 0.465525 7.1:+37730340 None:intergenic
GAAACCTAAGCAGGTTATAT+GGG 0.466162 7.1:-37730623 MS.gene89296:CDS
TGACCCTTGAGGAGGTGATA+AGG 0.466381 7.1:-37731149 MS.gene89296:CDS
GAAGAAGATACCGCTGAGCC+AGG 0.466879 7.1:-37731105 MS.gene89296:CDS
GCCAGGGAAGGAAGTAGAAA+TGG 0.466913 7.1:-37731088 MS.gene89296:CDS
ACAGGAGTGAGATGAGATCC+AGG 0.468067 7.1:+37730364 None:intergenic
TGGATTGAGGAAATTAAACT+TGG 0.471770 7.1:+37731803 None:intergenic
AATGTAAACATGCTATGAGT+TGG 0.473616 7.1:+37731444 None:intergenic
TCAATTTCTGCTTGTTAGCA+GGG 0.474049 7.1:+37729996 None:intergenic
GGGGATACTCCTTGAGGCGG+AGG 0.475436 7.1:+37730271 None:intergenic
TCAGTTTCCGGTGCAGCCCT+AGG 0.479497 7.1:+37731705 None:intergenic
AACTGTATACTGCTCAGCCT+CGG 0.479959 7.1:+37731605 None:intergenic
TGTCTACCGGTCATTTGCAT+TGG 0.480334 7.1:+37730469 None:intergenic
TTCCTCAGGTGGCGGCGGTG+GGG 0.482053 7.1:+37730252 None:intergenic
CGGTCATTTGCATTGGAGAA+GGG 0.482996 7.1:+37730476 None:intergenic
AGAGCAAGAAAGAATACAAA+TGG 0.484421 7.1:-37731253 MS.gene89296:CDS
GGAGCTTCCTCAGGTGGCGG+CGG 0.486510 7.1:+37730247 None:intergenic
AGGATTATTGCTAATTATGC+GGG 0.488493 7.1:-37731831 MS.gene89296:CDS
TGAGACAGAAATTTATCCTC+AGG 0.489117 7.1:+37730163 None:intergenic
TCAGTGGGAGGAGCGGGTAG+AGG 0.492761 7.1:+37732011 None:intergenic
GAAGGAAGTAGAAATGGAAA+TGG 0.494847 7.1:-37731082 MS.gene89296:CDS
TTCTCCTTATCACCTCCTCA+AGG 0.496749 7.1:+37731145 None:intergenic
CCTTGCTGATGCATATTCAA+AGG 0.496930 7.1:-37731412 MS.gene89296:CDS
TTTCCATCAGTGGGAGGAGC+GGG 0.498622 7.1:+37732005 None:intergenic
TAGGAATTGATGGATGCAAT+GGG 0.500307 7.1:+37730419 None:intergenic
ACTGTATACTGCTCAGCCTC+GGG 0.500711 7.1:+37731606 None:intergenic
GTGGAGGAATGGAAATTCCT+TGG 0.503126 7.1:+37730389 None:intergenic
CCGGTCATTTGCATTGGAGA+AGG 0.503771 7.1:+37730475 None:intergenic
CTCACCCTCATCCACCATCA+TGG 0.503817 7.1:-37730318 MS.gene89296:CDS
TTGGTTGAATCTCTATCTGC+AGG 0.504250 7.1:+37730907 None:intergenic
GTGCATGTCTGGCCTTGGTG+GGG 0.504963 7.1:+37730525 None:intergenic
AGCAAGGGAGGAGCTTCCTC+AGG 0.505902 7.1:+37730238 None:intergenic
ATTTCCATTCCTCCACCACC+TGG 0.507244 7.1:-37730382 MS.gene89296:CDS
AGATCCAGGTGGTGGAGGAA+TGG 0.507543 7.1:+37730378 None:intergenic
AATCTTCTACTCATAAACCT+AGG 0.508510 7.1:-37731722 MS.gene89296:CDS
TGGGTCTTGAATTTGAAAAG+AGG 0.510533 7.1:-37731851 MS.gene89296:CDS
CTACCCGCTCCTCCCACTGA+TGG 0.510889 7.1:-37732008 MS.gene89296:CDS
AATGGAAATGGACGAGGAAG+AGG 0.514865 7.1:-37731070 MS.gene89296:CDS
GGAGGAGCTTCCTCAGGTGG+CGG 0.516491 7.1:+37730244 None:intergenic
AATCTCAGCCTTAACAGCAT+TGG 0.516821 7.1:+37730663 None:intergenic
GTCATTTGCATTGGAGAAGG+GGG 0.517742 7.1:+37730478 None:intergenic
GAAGAGGGAATGAGAGCTGC+TGG 0.519266 7.1:-37731036 MS.gene89296:CDS
TGATGGAAATCTTGGGGAGG+AGG 0.519562 7.1:-37731991 MS.gene89296:CDS
CAGAAATTGAGTGGAAAGCC+AGG 0.519574 7.1:-37729983 MS.gene89296:CDS
TCTGTTCCTAATGTTGATGA+AGG 0.520094 7.1:-37730112 MS.gene89296:CDS
TCATAAACCTAGGGCTGCAC+CGG 0.523333 7.1:-37731712 MS.gene89296:CDS
GTGAGATGAGATCCAGGTGG+TGG 0.523388 7.1:+37730370 None:intergenic
AGATGAGATCCAGGTGGTGG+AGG 0.525008 7.1:+37730373 None:intergenic
GGATGAGGGTGAGGAACAAA+AGG 0.527531 7.1:+37730328 None:intergenic
ATCATCCATGATGGTGGATG+AGG 0.529327 7.1:+37730313 None:intergenic
TCCTCAAGGGTCATTGGAAG+AGG 0.529467 7.1:+37731159 None:intergenic
AGAAAGAATACAAATGGCTA+TGG 0.530036 7.1:-37731247 MS.gene89296:CDS
TGCTGGTAATATGCATGATA+GGG 0.530338 7.1:+37731774 None:intergenic
TCTGGTTCCTCTGGAAGCAA+GGG 0.530551 7.1:+37730223 None:intergenic
TTTGCGGTTTCTCCCATCAC+CGG 0.535322 7.1:-37730883 MS.gene89296:CDS
GATGTGTGAATAGGCTGGAA+TGG 0.536148 7.1:-37731320 MS.gene89296:CDS
GGCTTCCTGAAGGTATTACA+AGG 0.536300 7.1:-37731581 MS.gene89296:CDS
CGGTAGACAACCTTCCATGA+TGG 0.536337 7.1:-37730455 MS.gene89296:CDS
GGTTTCATGAAATGAAATTG+GGG 0.538125 7.1:+37731465 None:intergenic
AGGGAAGAATAGTGAAGTCA+GGG 0.539590 7.1:-37730995 MS.gene89296:CDS
TATGCATGATAGGGGTCAGA+TGG 0.541297 7.1:+37731783 None:intergenic
CAGTTCTTCACAATCCTGAT+CGG 0.542613 7.1:+37730952 None:intergenic
AGCTCCTCCCTTGCTTCCAG+AGG 0.544676 7.1:-37730230 MS.gene89296:CDS
TGCACATGATGCAATCTCTC+GGG 0.545304 7.1:-37730507 MS.gene89296:CDS
AGGCTGAGCAGTATACAGTT+AGG 0.547036 7.1:-37731602 MS.gene89296:CDS
ATGCACATGATGCAATCTCT+CGG 0.547467 7.1:-37730508 MS.gene89296:CDS
TGAATCTGTCGGCAGCCTGA+AGG 0.547532 7.1:-37730044 MS.gene89296:CDS
CACCACGCTCTCTCAAGGCT+AGG 0.548324 7.1:+37729900 None:intergenic
TCTGCTTGTTAGCAGGGAGT+CGG 0.548444 7.1:+37730002 None:intergenic
TCCCCAAGATTTCCATCAGT+GGG 0.549023 7.1:+37731996 None:intergenic
GGAGCGGGTAGAGGAAGTAT+AGG 0.550091 7.1:+37732020 None:intergenic
TTTGACAGGATTGACAAGTA+GGG 0.551971 7.1:-37731499 MS.gene89296:CDS
GGGTGTTTGACCACCCATCA+TGG 0.552611 7.1:+37730441 None:intergenic
GATGGTCACAGCGGTAGTAT+TGG 0.553821 7.1:-37730601 MS.gene89296:CDS
TATTATAATCCTAATAGCAT+TGG 0.554951 7.1:-37730559 MS.gene89296:CDS
CATGATGCAATCTCTCGGGC+CGG 0.559495 7.1:-37730503 MS.gene89296:CDS
TCCAATAGTTCTAGTGTGTG+TGG 0.560378 7.1:+37731938 None:intergenic
TCATTTGCATTGGAGAAGGG+GGG 0.560668 7.1:+37730479 None:intergenic
ACTGGAAGAGACCAGAAGAC+AGG 0.560860 7.1:-37730933 MS.gene89296:CDS
GTGTGTGTGGCAACAGTTGT+CGG 0.561561 7.1:+37731951 None:intergenic
GGAATCAGTTCACCGGTGAT+GGG 0.563015 7.1:+37730871 None:intergenic
GGTAGACAACCTTCCATGAT+GGG 0.565023 7.1:-37730454 MS.gene89296:CDS
TGAAAGATGTGTGAATAGGC+TGG 0.567577 7.1:-37731325 MS.gene89296:CDS
TCTACCACCACGCTCTCTCA+AGG 0.569307 7.1:+37729895 None:intergenic
ATAGGAATTGATGGATGCAA+TGG 0.570703 7.1:+37730418 None:intergenic
GGTTCCTCTGGAAGCAAGGG+AGG 0.571286 7.1:+37730226 None:intergenic
AAATGATGAGAAACCTAAGC+AGG 0.571307 7.1:-37730632 MS.gene89296:CDS
GGTCATTTGCATTGGAGAAG+GGG 0.571315 7.1:+37730477 None:intergenic
ATCTTCTACTCATAAACCTA+GGG 0.571317 7.1:-37731721 MS.gene89296:CDS
GGCTTGGAAGACAATGATGA+AGG 0.572955 7.1:-37731015 MS.gene89296:CDS
ATCCCCACCGCCGCCACCTG+AGG 0.573310 7.1:-37730254 MS.gene89296:CDS
GATAGGGGTCAGATGGATTG+AGG 0.573806 7.1:+37731790 None:intergenic
CCATTATTGATAAAACCTCT+CGG 0.574405 7.1:-37731887 MS.gene89296:CDS
GAGGATTATTGCTAATTATG+CGG 0.574782 7.1:-37731832 MS.gene89296:CDS
CCTAAGCAGGTTATATGGGA+TGG 0.577125 7.1:-37730619 MS.gene89296:CDS
AAGGGAGGAGCTTCCTCAGG+TGG 0.577679 7.1:+37730241 None:intergenic
GTTTGACCACCCATCATGGA+AGG 0.578074 7.1:+37730445 None:intergenic
ATGTGTGAATAGGCTGGAAT+GGG 0.578972 7.1:-37731319 MS.gene89296:CDS
CTCCCCAAGATTTCCATCAG+TGG 0.579945 7.1:+37731995 None:intergenic
CATCCACCACCTCCGCCTCA+AGG 0.581195 7.1:-37730280 MS.gene89296:CDS
AGTAGAAATGGAAATGGACG+AGG 0.582780 7.1:-37731076 MS.gene89296:CDS
TGCTTGAAAGATGTGTGAAT+AGG 0.583530 7.1:-37731329 MS.gene89296:CDS
CCTTCTCCAATGCAAATGAC+CGG 0.584979 7.1:-37730475 MS.gene89296:CDS
AGCGTTCACTAGAGCAAGCT+AGG 0.585114 7.1:-37731296 MS.gene89296:CDS
TCTCCTTATCACCTCCTCAA+GGG 0.585204 7.1:+37731146 None:intergenic
CATGATGGTGGATGAGGGTG+AGG 0.585720 7.1:+37730319 None:intergenic
TAGTATCGATGTAGCAACTA+CGG 0.586896 7.1:-37731682 MS.gene89296:CDS
TCCCACTGATGGAAATCTTG+GGG 0.587594 7.1:-37731997 MS.gene89296:CDS
GAAACTCAGAAAGCATGTGC+TGG 0.588759 7.1:+37731757 None:intergenic
GGATTGAGGAAATTAAACTT+GGG 0.589490 7.1:+37731804 None:intergenic
CATTTGCATTGGAGAAGGGG+GGG 0.592805 7.1:+37730480 None:intergenic
ACCACGCTCTCTCAAGGCTA+GGG 0.592917 7.1:+37729901 None:intergenic
TCAGCGGTATCTTCTTCCGT+AGG 0.593581 7.1:+37731111 None:intergenic
CAATCTCTGTCTGAATCTGT+CGG 0.593849 7.1:-37730055 MS.gene89296:CDS
GGGTGAGGAACAAAAGGTCG+TGG 0.601172 7.1:+37730334 None:intergenic
AGAGGCCCAACCTGTTGAAG+AGG 0.601690 7.1:-37731052 MS.gene89296:CDS
TACTTCCTTCCCTGGCTCAG+CGG 0.605484 7.1:+37731095 None:intergenic
TTCTTCACAATCCTGATCGG+CGG 0.605780 7.1:+37730955 None:intergenic
ATCATAGGCATCATCCATGA+TGG 0.605913 7.1:+37730304 None:intergenic
AAGAAGATACCGCTGAGCCA+GGG 0.607724 7.1:-37731104 MS.gene89296:CDS
GTTGATGAAGGAAATCTCAA+AGG 0.607889 7.1:-37730100 MS.gene89296:CDS
GAGAAGTAAGATAACGCCTA+CGG 0.611067 7.1:-37731127 MS.gene89296:CDS
TGGAAAGCCAGGCTTTCTCA+AGG 0.611679 7.1:-37729972 MS.gene89296:CDS
TTCATCATCATGTGCCAGAG+TGG 0.613812 7.1:+37730756 None:intergenic
ACAGATATACTAATGCGAGC+AGG 0.614121 7.1:+37730130 None:intergenic
TCTTGGGGAGGAGGTGATCG+AGG 0.614190 7.1:-37731982 MS.gene89296:CDS
ATTTCCATCAGTGGGAGGAG+CGG 0.614809 7.1:+37732004 None:intergenic
CATCATGGAAGGTTGTCTAC+CGG 0.615785 7.1:+37730456 None:intergenic
CACTGATGGAAATCTTGGGG+AGG 0.616691 7.1:-37731994 MS.gene89296:CDS
TCCCTAGCCTTGAGAGAGCG+TGG 0.616920 7.1:-37729902 MS.gene89296:CDS
GAGGCCCAACCTGTTGAAGA+GGG 0.617161 7.1:-37731051 MS.gene89296:CDS
GCTAACAAGCAGAAATTGAG+TGG 0.618988 7.1:-37729992 MS.gene89296:CDS
GCTTGGAAGACAATGATGAA+GGG 0.620474 7.1:-37731014 MS.gene89296:CDS
AGATACCGCTGAGCCAGGGA+AGG 0.620764 7.1:-37731100 MS.gene89296:CDS
AATAGACTTTGCATATGATG+AGG 0.622497 7.1:-37731193 MS.gene89296:CDS
AGAAGCCTGATATTTCTGCC+CGG 0.622543 7.1:-37731659 MS.gene89296:CDS
GTTTCATGAAATGAAATTGG+GGG 0.624393 7.1:+37731466 None:intergenic
TCAATTCCTATGAATAACCA+AGG 0.629776 7.1:-37730406 MS.gene89296:CDS
TTTCTTTACTGGTTTAAACC+GGG 0.630709 7.1:+37731641 None:intergenic
ATTCACACATCTTTCAAGCA+CGG 0.630916 7.1:+37731332 None:intergenic
AAATTTCTGTCTCAGCATCA+GGG 0.633131 7.1:-37730154 MS.gene89296:CDS
TCCTGAAGGTATTACAAGGG+AGG 0.633171 7.1:-37731577 MS.gene89296:CDS
ACCTCTTCCAATGACCCTTG+AGG 0.633473 7.1:-37731160 MS.gene89296:CDS
ACTAATTGGAATCAGTTCAC+CGG 0.634021 7.1:+37730864 None:intergenic
CCTTTGAATATGCATCAGCA+AGG 0.634998 7.1:+37731412 None:intergenic
GCACATTACAATGTTAGTGG+AGG 0.635245 7.1:-37729935 MS.gene89296:CDS
CTTTGAATATGCATCAGCAA+GGG 0.636298 7.1:+37731413 None:intergenic
GAGACAGAAATTTATCCTCA+GGG 0.636470 7.1:+37730164 None:intergenic
GGAATTGATGGATGCAATGG+GGG 0.638744 7.1:+37730421 None:intergenic
CAGAGGAACCAGAACCAAAG+AGG 0.638763 7.1:-37730213 MS.gene89296:CDS
ATAGGCATCATCCATGATGG+TGG 0.639676 7.1:+37730307 None:intergenic
GTATACTGCTCAGCCTCGGG+AGG 0.644159 7.1:+37731609 None:intergenic
GGCGGTGGGGATACTCCTTG+AGG 0.655236 7.1:+37730265 None:intergenic
TCTTCCAATGACCCTTGAGG+AGG 0.657399 7.1:-37731157 MS.gene89296:CDS
CAAAATTCGAGAAACCACTC+TGG 0.660209 7.1:-37730770 MS.gene89296:CDS
TCATCCATGATGGTGGATGA+GGG 0.660594 7.1:+37730314 None:intergenic
TATACAGTTAGGCTTCCTGA+AGG 0.661500 7.1:-37731591 MS.gene89296:CDS
CGATTCTGCTCTGATCCCTG+AGG 0.667531 7.1:-37730179 MS.gene89296:CDS
CCAAGATTTCCATCAGTGGG+AGG 0.670695 7.1:+37731999 None:intergenic
GCTTCCTGAAGGTATTACAA+GGG 0.678634 7.1:-37731580 MS.gene89296:CDS
GAAAGTACTTGATCCTCCCG+AGG 0.684311 7.1:-37731622 MS.gene89296:CDS
AGACAACCTTCCATGATGGG+TGG 0.687557 7.1:-37730451 MS.gene89296:CDS
CTAGCCTTGAGAGAGCGTGG+TGG 0.691451 7.1:-37729899 MS.gene89296:CDS
AGGAATTGATGGATGCAATG+GGG 0.691498 7.1:+37730420 None:intergenic
GGTGGGGATACTCCTTGAGG+CGG 0.694034 7.1:+37730268 None:intergenic
GCTGGTAATATGCATGATAG+GGG 0.722069 7.1:+37731775 None:intergenic
GTTATATGGGATGGTCACAG+CGG 0.750758 7.1:-37730610 MS.gene89296:CDS
GGAGTGAGATGAGATCCAGG+TGG 0.799523 7.1:+37730367 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATACTGTATGTTATGTAT+AGG + chr7.1:37731335-37731354 None:intergenic 20.0%
!! TATTATAATCCTAATAGCAT+TGG - chr7.1:37731350-37731369 MS.gene89296:CDS 20.0%
! GAAATAGCAAAAAACATAGT+TGG - chr7.1:37731173-37731192 MS.gene89296:CDS 25.0%
! TGGTTTCATGAAATGAAATT+GGG + chr7.1:37730448-37730467 None:intergenic 25.0%
! TTGGTTTCATGAAATGAAAT+TGG + chr7.1:37730449-37730468 None:intergenic 25.0%
!!! TCAATAATGGTTTTAATGTC+TGG + chr7.1:37730012-37730031 None:intergenic 25.0%
AAAGCTTACAACACAATTTG+TGG - chr7.1:37730368-37730387 MS.gene89296:CDS 30.0%
AATAGACTTTGCATATGATG+AGG - chr7.1:37730716-37730735 MS.gene89296:CDS 30.0%
AATCTTCTACTCATAAACCT+AGG - chr7.1:37730187-37730206 MS.gene89296:CDS 30.0%
AATGTAAACATGCTATGAGT+TGG + chr7.1:37730468-37730487 None:intergenic 30.0%
AGAAAGAATACAAATGGCTA+TGG - chr7.1:37730662-37730681 MS.gene89296:CDS 30.0%
AGAGCAAGAAAGAATACAAA+TGG - chr7.1:37730656-37730675 MS.gene89296:CDS 30.0%
AGATTTCCTTCATCAACATT+AGG + chr7.1:37731806-37731825 None:intergenic 30.0%
AGGATTATTGCTAATTATGC+GGG - chr7.1:37730078-37730097 MS.gene89296:CDS 30.0%
ATCTTCTACTCATAAACCTA+GGG - chr7.1:37730188-37730207 MS.gene89296:CDS 30.0%
CCATTATTGATAAAACCTCT+CGG - chr7.1:37730022-37730041 MS.gene89296:CDS 30.0%
GAAATTCCTTGGTTATTCAT+AGG + chr7.1:37731512-37731531 None:intergenic 30.0%
GAGGATTATTGCTAATTATG+CGG - chr7.1:37730077-37730096 MS.gene89296:CDS 30.0%
GGATTGAGGAAATTAAACTT+GGG + chr7.1:37730108-37730127 None:intergenic 30.0%
GGTTTCATGAAATGAAATTG+GGG + chr7.1:37730447-37730466 None:intergenic 30.0%
GTTTCATGAAATGAAATTGG+GGG + chr7.1:37730446-37730465 None:intergenic 30.0%
TCAATTCCTATGAATAACCA+AGG - chr7.1:37731503-37731522 MS.gene89296:CDS 30.0%
TCTTTCTGTTCTTTGTACTT+AGG + chr7.1:37731107-37731126 None:intergenic 30.0%
TGGATTGAGGAAATTAAACT+TGG + chr7.1:37730109-37730128 None:intergenic 30.0%
TGGTTATTCATAGGAATTGA+TGG + chr7.1:37731503-37731522 None:intergenic 30.0%
! TAGAGATTCAACCAATTTTG+CGG - chr7.1:37731010-37731029 MS.gene89296:CDS 30.0%
!! CTTTCTTTACTGGTTTAAAC+CGG + chr7.1:37730272-37730291 None:intergenic 30.0%
!! TTTCTTTACTGGTTTAAACC+GGG + chr7.1:37730271-37730290 None:intergenic 30.0%
!!! ATAATGGTTTTAATGTCTGG+AGG + chr7.1:37730009-37730028 None:intergenic 30.0%
!!! TAATGGTTTTAATGTCTGGA+GGG + chr7.1:37730008-37730027 None:intergenic 30.0%
!!! TCCTGATATTTTTGGTACTA+CGG - chr7.1:37731211-37731230 MS.gene89296:CDS 30.0%
AAAAATATCAGGACGAGTCT+GGG + chr7.1:37731204-37731223 None:intergenic 35.0%
AAATCTCAAAGGACAAGTTC+TGG - chr7.1:37731820-37731839 MS.gene89296:CDS 35.0%
AAATGATGAGAAACCTAAGC+AGG - chr7.1:37731277-37731296 MS.gene89296:CDS 35.0%
AAATTTCTGTCTCAGCATCA+GGG - chr7.1:37731755-37731774 MS.gene89296:CDS 35.0%
ACATCGATACTATCAGTTTC+CGG + chr7.1:37730219-37730238 None:intergenic 35.0%
ACTAATTGGAATCAGTTCAC+CGG + chr7.1:37731048-37731067 None:intergenic 35.0%
ACTTGTCAATCCTGTCAAAA+AGG + chr7.1:37730409-37730428 None:intergenic 35.0%
AGAAACCTAAGCAGGTTATA+TGG - chr7.1:37731285-37731304 MS.gene89296:CDS 35.0%
ATTCACACATCTTTCAAGCA+CGG + chr7.1:37730580-37730599 None:intergenic 35.0%
CTTGCACATTACAATGTTAG+TGG - chr7.1:37731971-37731990 MS.gene89296:CDS 35.0%
CTTTGAATATGCATCAGCAA+GGG + chr7.1:37730499-37730518 None:intergenic 35.0%
GAAACCTAAGCAGGTTATAT+GGG - chr7.1:37731286-37731305 MS.gene89296:CDS 35.0%
GAAGGAAGTAGAAATGGAAA+TGG - chr7.1:37730827-37730846 MS.gene89296:CDS 35.0%
GAGACAGAAATTTATCCTCA+GGG + chr7.1:37731748-37731767 None:intergenic 35.0%
GGATCAAGTACTTTCTTTAC+TGG + chr7.1:37730282-37730301 None:intergenic 35.0%
TAAATTTCTGTCTCAGCATC+AGG - chr7.1:37731754-37731773 MS.gene89296:CDS 35.0%
TACAAATGGCTATGGTTGAT+TGG - chr7.1:37730670-37730689 MS.gene89296:CDS 35.0%
TCCGTAGTACCAAAAATATC+AGG + chr7.1:37731215-37731234 None:intergenic 35.0%
TGAGACAGAAATTTATCCTC+AGG + chr7.1:37731749-37731768 None:intergenic 35.0%
TGCTGGTAATATGCATGATA+GGG + chr7.1:37730138-37730157 None:intergenic 35.0%
TGCTTGAAAGATGTGTGAAT+AGG - chr7.1:37730580-37730599 MS.gene89296:CDS 35.0%
TGGGTCTTGAATTTGAAAAG+AGG - chr7.1:37730058-37730077 MS.gene89296:CDS 35.0%
TGTTCTGACATCTCACTAAT+TGG + chr7.1:37731062-37731081 None:intergenic 35.0%
TTTGACAGGATTGACAAGTA+GGG - chr7.1:37730410-37730429 MS.gene89296:CDS 35.0%
! AATGGGAAATCCTTTTTGAC+AGG - chr7.1:37730396-37730415 MS.gene89296:CDS 35.0%
! ATAGGAATTGATGGATGCAA+TGG + chr7.1:37731494-37731513 None:intergenic 35.0%
! GTTGATGAAGGAAATCTCAA+AGG - chr7.1:37731809-37731828 MS.gene89296:CDS 35.0%
! TAGGAATTGATGGATGCAAT+GGG + chr7.1:37731493-37731512 None:intergenic 35.0%
! TCAATTTCTGCTTGTTAGCA+GGG + chr7.1:37731916-37731935 None:intergenic 35.0%
! TCTGTTCCTAATGTTGATGA+AGG - chr7.1:37731797-37731816 MS.gene89296:CDS 35.0%
! TTTTGACAGGATTGACAAGT+AGG - chr7.1:37730409-37730428 MS.gene89296:CDS 35.0%
!! CCGAGAGGTTTTATCAATAA+TGG + chr7.1:37730025-37730044 None:intergenic 35.0%
!! TAGTATCGATGTAGCAACTA+CGG - chr7.1:37730227-37730246 MS.gene89296:CDS 35.0%
!! TCTCGGTTTGTTGCTAAAAT+GGG - chr7.1:37730039-37730058 MS.gene89296:CDS 35.0%
!!! AATGGTTTTAATGTCTGGAG+GGG + chr7.1:37730007-37730026 None:intergenic 35.0%
!!! TGATATTTTTGGTACTACGG+AGG - chr7.1:37731214-37731233 MS.gene89296:CDS 35.0%
AAGGGAAGAATAGTGAAGTC+AGG - chr7.1:37730913-37730932 MS.gene89296:CDS 40.0%
AATCTCAGCCTTAACAGCAT+TGG + chr7.1:37731249-37731268 None:intergenic 40.0%
ACACAATTTGTGGCTCGTAA+TGG - chr7.1:37730378-37730397 MS.gene89296:CDS 40.0%
ACAGATATACTAATGCGAGC+AGG + chr7.1:37731782-37731801 None:intergenic 40.0%
ACTAGAGCAAGCTAGGAAAA+TGG - chr7.1:37730620-37730639 MS.gene89296:CDS 40.0%
AGAGGTTTCCAATGCTGTTA+AGG - chr7.1:37731238-37731257 MS.gene89296:CDS 40.0%
AGCCTGAAGGAAAAAATTGC+TGG - chr7.1:37731878-37731897 MS.gene89296:CDS 40.0%
AGGGAAGAATAGTGAAGTCA+GGG - chr7.1:37730914-37730933 MS.gene89296:CDS 40.0%
AGTAGAAATGGAAATGGACG+AGG - chr7.1:37730833-37730852 MS.gene89296:CDS 40.0%
ATCATAGGCATCATCCATGA+TGG + chr7.1:37731608-37731627 None:intergenic 40.0%
ATGCACATGATGCAATCTCT+CGG - chr7.1:37731401-37731420 MS.gene89296:CDS 40.0%
ATGTGTGAATAGGCTGGAAT+GGG - chr7.1:37730590-37730609 MS.gene89296:CDS 40.0%
ATTGGAAGGCCAATGCTATT+AGG + chr7.1:37731362-37731381 None:intergenic 40.0%
CAAAAATATCAGGACGAGTC+TGG + chr7.1:37731205-37731224 None:intergenic 40.0%
CAAAATTCGAGAAACCACTC+TGG - chr7.1:37731139-37731158 MS.gene89296:CDS 40.0%
CAATCTCTGTCTGAATCTGT+CGG - chr7.1:37731854-37731873 MS.gene89296:CDS 40.0%
CACAATTTGTGGCTCGTAAT+GGG - chr7.1:37730379-37730398 MS.gene89296:CDS 40.0%
CAGTTCTTCACAATCCTGAT+CGG + chr7.1:37730960-37730979 None:intergenic 40.0%
CCTGAAGGAAAAAATTGCTG+GGG - chr7.1:37731880-37731899 MS.gene89296:CDS 40.0%
CCTTGCTGATGCATATTCAA+AGG - chr7.1:37730497-37730516 MS.gene89296:CDS 40.0%
CCTTTGAATATGCATCAGCA+AGG + chr7.1:37730500-37730519 None:intergenic 40.0%
GAGAAGTAAGATAACGCCTA+CGG - chr7.1:37730782-37730801 MS.gene89296:CDS 40.0%
GCACATTACAATGTTAGTGG+AGG - chr7.1:37731974-37731993 MS.gene89296:CDS 40.0%
GCCTGAAGGAAAAAATTGCT+GGG - chr7.1:37731879-37731898 MS.gene89296:CDS 40.0%
GCTAACAAGCAGAAATTGAG+TGG - chr7.1:37731917-37731936 MS.gene89296:CDS 40.0%
GCTGGTAATATGCATGATAG+GGG + chr7.1:37730137-37730156 None:intergenic 40.0%
GCTTGGAAGACAATGATGAA+GGG - chr7.1:37730895-37730914 MS.gene89296:CDS 40.0%
TATACAGTTAGGCTTCCTGA+AGG - chr7.1:37730318-37730337 MS.gene89296:CDS 40.0%
TGAAAGATGTGTGAATAGGC+TGG - chr7.1:37730584-37730603 MS.gene89296:CDS 40.0%
TTAAACCGGGCAGAAATATC+AGG + chr7.1:37730258-37730277 None:intergenic 40.0%
TTGGTTGAATCTCTATCTGC+AGG + chr7.1:37731005-37731024 None:intergenic 40.0%
! AGGAATTGATGGATGCAATG+GGG + chr7.1:37731492-37731511 None:intergenic 40.0%
! ATTTTGTCCTTGAGAAAGCC+TGG + chr7.1:37731947-37731966 None:intergenic 40.0%
! CAGACTCGTCCTGATATTTT+TGG - chr7.1:37731203-37731222 MS.gene89296:CDS 40.0%
! CAGAGTGGTTTCTCGAATTT+TGG + chr7.1:37731141-37731160 None:intergenic 40.0%
! CTCAATTTCTGCTTGTTAGC+AGG + chr7.1:37731917-37731936 None:intergenic 40.0%
! GGTTGATTGGCATGATTTTG+TGG - chr7.1:37730683-37730702 MS.gene89296:CDS 40.0%
! GTGCTGGTAATATGCATGAT+AGG + chr7.1:37730139-37730158 None:intergenic 40.0%
! TGATTGGCATGATTTTGTGG+TGG - chr7.1:37730686-37730705 MS.gene89296:CDS 40.0%
!! AAAGGTTTTGATGCCTCCAA+AGG - chr7.1:37730515-37730534 MS.gene89296:CDS 40.0%
!! AAGGTTTTGATGCCTCCAAA+GGG - chr7.1:37730516-37730535 MS.gene89296:CDS 40.0%
!! CATTTTAGCAACAAACCGAG+AGG + chr7.1:37730040-37730059 None:intergenic 40.0%
!! CTCTCGGTTTGTTGCTAAAA+TGG - chr7.1:37730038-37730057 MS.gene89296:CDS 40.0%
!! GCTTCCTGAAGGTATTACAA+GGG - chr7.1:37730329-37730348 MS.gene89296:CDS 40.0%
!! TCCAATAGTTCTAGTGTGTG+TGG + chr7.1:37729974-37729993 None:intergenic 40.0%
!!! ATGGTTTTAATGTCTGGAGG+GGG + chr7.1:37730006-37730025 None:intergenic 40.0%
AACTGTATACTGCTCAGCCT+CGG + chr7.1:37730307-37730326 None:intergenic 45.0%
AAGAATCTAAACCGCCGATC+AGG - chr7.1:37730943-37730962 MS.gene89296:CDS 45.0%
AATGGAAATGGACGAGGAAG+AGG - chr7.1:37730839-37730858 MS.gene89296:CDS 45.0%
AGGCTGAGCAGTATACAGTT+AGG - chr7.1:37730307-37730326 MS.gene89296:CDS 45.0%
ATAGGCATCATCCATGATGG+TGG + chr7.1:37731605-37731624 None:intergenic 45.0%
CAGAAATTGAGTGGAAAGCC+AGG - chr7.1:37731926-37731945 MS.gene89296:CDS 45.0%
CATCATGGAAGGTTGTCTAC+CGG + chr7.1:37731456-37731475 None:intergenic 45.0%
CATTCCCTCTTCAACAGGTT+GGG + chr7.1:37730865-37730884 None:intergenic 45.0%
CCATCCCATATAACCTGCTT+AGG + chr7.1:37731293-37731312 None:intergenic 45.0%
CCTAAGCAGGTTATATGGGA+TGG - chr7.1:37731290-37731309 MS.gene89296:CDS 45.0%
CCTTCTCCAATGCAAATGAC+CGG - chr7.1:37731434-37731453 MS.gene89296:CDS 45.0%
CGATCAGGATTGTGAAGAAC+TGG - chr7.1:37730958-37730977 MS.gene89296:CDS 45.0%
CGGTCATTTGCATTGGAGAA+GGG + chr7.1:37731436-37731455 None:intergenic 45.0%
CTCCCACTGATGGAAATCTT+GGG - chr7.1:37729911-37729930 MS.gene89296:CDS 45.0%
GATCGGCGGTTTAGATTCTT+CGG + chr7.1:37730943-37730962 None:intergenic 45.0%
GATGGGAGAAACCGCAAAAT+TGG + chr7.1:37731024-37731043 None:intergenic 45.0%
GATGTGTGAATAGGCTGGAA+TGG - chr7.1:37730589-37730608 MS.gene89296:CDS 45.0%
GATTGCATCATGTGCATGTC+TGG + chr7.1:37731398-37731417 None:intergenic 45.0%
GCCACACACACTAGAACTAT+TGG - chr7.1:37729970-37729989 MS.gene89296:CDS 45.0%
GGCTTGGAAGACAATGATGA+AGG - chr7.1:37730894-37730913 MS.gene89296:CDS 45.0%
GGTAGACAACCTTCCATGAT+GGG - chr7.1:37731455-37731474 MS.gene89296:CDS 45.0%
GGTCATTTGCATTGGAGAAG+GGG + chr7.1:37731435-37731454 None:intergenic 45.0%
GTCATTTGCATTGGAGAAGG+GGG + chr7.1:37731434-37731453 None:intergenic 45.0%
GTGGAGGAATGGAAATTCCT+TGG + chr7.1:37731523-37731542 None:intergenic 45.0%
GTTATATGGGATGGTCACAG+CGG - chr7.1:37731299-37731318 MS.gene89296:CDS 45.0%
TATGCATGATAGGGGTCAGA+TGG + chr7.1:37730129-37730148 None:intergenic 45.0%
TCATTCCCTCTTCAACAGGT+TGG + chr7.1:37730866-37730885 None:intergenic 45.0%
TCATTTGCATTGGAGAAGGG+GGG + chr7.1:37731433-37731452 None:intergenic 45.0%
TCCATTTCTACTTCCTTCCC+TGG + chr7.1:37730825-37730844 None:intergenic 45.0%
TCCCACTGATGGAAATCTTG+GGG - chr7.1:37729912-37729931 MS.gene89296:CDS 45.0%
TCCCCAAGATTTCCATCAGT+GGG + chr7.1:37729916-37729935 None:intergenic 45.0%
TCCTCCCTTGTAATACCTTC+AGG + chr7.1:37730336-37730355 None:intergenic 45.0%
TCTCCTTATCACCTCCTCAA+GGG + chr7.1:37730766-37730785 None:intergenic 45.0%
TGCACATGATGCAATCTCTC+GGG - chr7.1:37731402-37731421 MS.gene89296:CDS 45.0%
TGTCTACCGGTCATTTGCAT+TGG + chr7.1:37731443-37731462 None:intergenic 45.0%
TTCATCATCATGTGCCAGAG+TGG + chr7.1:37731156-37731175 None:intergenic 45.0%
TTCTCCTTATCACCTCCTCA+AGG + chr7.1:37730767-37730786 None:intergenic 45.0%
TTCTTCACAATCCTGATCGG+CGG + chr7.1:37730957-37730976 None:intergenic 45.0%
! AGAAGCCTGATATTTCTGCC+CGG - chr7.1:37730250-37730269 MS.gene89296:CDS 45.0%
! GAAACTCAGAAAGCATGTGC+TGG + chr7.1:37730155-37730174 None:intergenic 45.0%
! GGAATTGATGGATGCAATGG+GGG + chr7.1:37731491-37731510 None:intergenic 45.0%
! TTTTGGTACTACGGAGGAAG+AGG - chr7.1:37731220-37731239 MS.gene89296:CDS 45.0%
!! AGGTTTTGATGCCTCCAAAG+GGG - chr7.1:37730517-37730536 MS.gene89296:CDS 45.0%
!! ATCATCCATGATGGTGGATG+AGG + chr7.1:37731599-37731618 None:intergenic 45.0%
!! GGCTTCCTGAAGGTATTACA+AGG - chr7.1:37730328-37730347 MS.gene89296:CDS 45.0%
!! TCATCCATGATGGTGGATGA+GGG + chr7.1:37731598-37731617 None:intergenic 45.0%
!! TCCTGAAGGTATTACAAGGG+AGG - chr7.1:37730332-37730351 MS.gene89296:CDS 45.0%
!!! CCCCAGCAATTTTTTCCTTC+AGG + chr7.1:37731883-37731902 None:intergenic 45.0%
!!! TGGTTTTAATGTCTGGAGGG+GGG + chr7.1:37730005-37730024 None:intergenic 45.0%
AAAGGTCGTGGAACAGGAAC+AGG + chr7.1:37731566-37731585 None:intergenic 50.0%
AAGAAGATACCGCTGAGCCA+GGG - chr7.1:37730805-37730824 MS.gene89296:CDS 50.0%
ACAGGAGTGAGATGAGATCC+AGG + chr7.1:37731548-37731567 None:intergenic 50.0%
ACCTCTTCCAATGACCCTTG+AGG - chr7.1:37730749-37730768 MS.gene89296:CDS 50.0%
ACTGGAAGAGACCAGAAGAC+AGG - chr7.1:37730976-37730995 MS.gene89296:CDS 50.0%
ACTGTATACTGCTCAGCCTC+GGG + chr7.1:37730306-37730325 None:intergenic 50.0%
AGCGTTCACTAGAGCAAGCT+AGG - chr7.1:37730613-37730632 MS.gene89296:CDS 50.0%
AGCTTCTCTGTCAACCCCTT+TGG + chr7.1:37730534-37730553 None:intergenic 50.0%
AGGTATTACAAGGGAGGAGC+TGG - chr7.1:37730338-37730357 MS.gene89296:CDS 50.0%
ATCACCTCCTCAAGGGTCAT+TGG + chr7.1:37730759-37730778 None:intergenic 50.0%
ATCATGTGCATGTCTGGCCT+TGG + chr7.1:37731392-37731411 None:intergenic 50.0%
ATTTCCATCAGTGGGAGGAG+CGG + chr7.1:37729908-37729927 None:intergenic 50.0%
ATTTCCATTCCTCCACCACC+TGG - chr7.1:37731527-37731546 MS.gene89296:CDS 50.0%
CACTGATGGAAATCTTGGGG+AGG - chr7.1:37729915-37729934 MS.gene89296:CDS 50.0%
CAGAGGAACCAGAACCAAAG+AGG - chr7.1:37731696-37731715 MS.gene89296:CDS 50.0%
CATTTGCATTGGAGAAGGGG+GGG + chr7.1:37731432-37731451 None:intergenic 50.0%
CCAAGATTTCCATCAGTGGG+AGG + chr7.1:37729913-37729932 None:intergenic 50.0%
CCGGTCATTTGCATTGGAGA+AGG + chr7.1:37731437-37731456 None:intergenic 50.0%
CCTCCCACTGATGGAAATCT+TGG - chr7.1:37729910-37729929 MS.gene89296:CDS 50.0%
CGGTAGACAACCTTCCATGA+TGG - chr7.1:37731454-37731473 MS.gene89296:CDS 50.0%
CTCCCCAAGATTTCCATCAG+TGG + chr7.1:37729917-37729936 None:intergenic 50.0%
GATGGTCACAGCGGTAGTAT+TGG - chr7.1:37731308-37731327 MS.gene89296:CDS 50.0%
GCCAGGGAAGGAAGTAGAAA+TGG - chr7.1:37730821-37730840 MS.gene89296:CDS 50.0%
GCTCTCATTCCCTCTTCAAC+AGG + chr7.1:37730870-37730889 None:intergenic 50.0%
GGAACAAAAGGTCGTGGAAC+AGG + chr7.1:37731572-37731591 None:intergenic 50.0%
GGAATCAGTTCACCGGTGAT+GGG + chr7.1:37731041-37731060 None:intergenic 50.0%
GGATGAGGGTGAGGAACAAA+AGG + chr7.1:37731584-37731603 None:intergenic 50.0%
GTGTGTGTGGCAACAGTTGT+CGG + chr7.1:37729961-37729980 None:intergenic 50.0%
GTTTGACCACCCATCATGGA+AGG + chr7.1:37731467-37731486 None:intergenic 50.0%
TCAGCGGTATCTTCTTCCGT+AGG + chr7.1:37730801-37730820 None:intergenic 50.0%
TCATAAACCTAGGGCTGCAC+CGG - chr7.1:37730197-37730216 MS.gene89296:CDS 50.0%
TCCTCAAGGGTCATTGGAAG+AGG + chr7.1:37730753-37730772 None:intergenic 50.0%
TCGTCATGCTTCTGCCTCTT+TGG + chr7.1:37731713-37731732 None:intergenic 50.0%
TCTTCCAATGACCCTTGAGG+AGG - chr7.1:37730752-37730771 MS.gene89296:CDS 50.0%
TGACCCTTGAGGAGGTGATA+AGG - chr7.1:37730760-37730779 MS.gene89296:CDS 50.0%
TGATGGAAATCTTGGGGAGG+AGG - chr7.1:37729918-37729937 MS.gene89296:CDS 50.0%
TGGAAAGCCAGGCTTTCTCA+AGG - chr7.1:37731937-37731956 MS.gene89296:CDS 50.0%
TGGAATCAGTTCACCGGTGA+TGG + chr7.1:37731042-37731061 None:intergenic 50.0%
TTCTCTGTCAACCCCTTTGG+AGG + chr7.1:37730531-37730550 None:intergenic 50.0%
TTTGCGGTTTCTCCCATCAC+CGG - chr7.1:37731026-37731045 MS.gene89296:CDS 50.0%
! AGACAACCTTCCATGATGGG+TGG - chr7.1:37731458-37731477 MS.gene89296:CDS 50.0%
! TCTGCTTGTTAGCAGGGAGT+CGG + chr7.1:37731910-37731929 None:intergenic 50.0%
! TCTGGTTCCTCTGGAAGCAA+GGG + chr7.1:37731689-37731708 None:intergenic 50.0%
! TGCTTCTGCCTCTTTGGTTC+TGG + chr7.1:37731707-37731726 None:intergenic 50.0%
!! CTCTTTGGTTCTGGTTCCTC+TGG + chr7.1:37731698-37731717 None:intergenic 50.0%
!! GAAAGTACTTGATCCTCCCG+AGG - chr7.1:37730287-37730306 MS.gene89296:CDS 50.0%
!! GATAGGGGTCAGATGGATTG+AGG + chr7.1:37730122-37730141 None:intergenic 50.0%
!! TTCTGGTTCCTCTGGAAGCA+AGG + chr7.1:37731690-37731709 None:intergenic 50.0%
ACCACGCTCTCTCAAGGCTA+GGG + chr7.1:37732011-37732030 None:intergenic 55.0%
AGAGGCCCAACCTGTTGAAG+AGG - chr7.1:37730857-37730876 MS.gene89296:CDS 55.0%
CATGATGCAATCTCTCGGGC+CGG - chr7.1:37731406-37731425 MS.gene89296:CDS 55.0%
CGATTCTGCTCTGATCCCTG+AGG - chr7.1:37731730-37731749 MS.gene89296:CDS 55.0%
CTCACCCTCATCCACCATCA+TGG - chr7.1:37731591-37731610 MS.gene89296:CDS 55.0%
GAAGAAGATACCGCTGAGCC+AGG - chr7.1:37730804-37730823 MS.gene89296:CDS 55.0%
GAAGAGGGAATGAGAGCTGC+TGG - chr7.1:37730873-37730892 MS.gene89296:CDS 55.0%
GAGGCCCAACCTGTTGAAGA+GGG - chr7.1:37730858-37730877 MS.gene89296:CDS 55.0%
GGAGTGAGATGAGATCCAGG+TGG + chr7.1:37731545-37731564 None:intergenic 55.0%
GGGTGAGGAACAAAAGGTCG+TGG + chr7.1:37731578-37731597 None:intergenic 55.0%
GGGTGTTTGACCACCCATCA+TGG + chr7.1:37731471-37731490 None:intergenic 55.0%
GTGAGATGAGATCCAGGTGG+TGG + chr7.1:37731542-37731561 None:intergenic 55.0%
TACTTCCTTCCCTGGCTCAG+CGG + chr7.1:37730817-37730836 None:intergenic 55.0%
TCTACCACCACGCTCTCTCA+AGG + chr7.1:37732017-37732036 None:intergenic 55.0%
TCTGCAGGAAGCCTGTCTTC+TGG + chr7.1:37730990-37731009 None:intergenic 55.0%
TGAATCTGTCGGCAGCCTGA+AGG - chr7.1:37731865-37731884 MS.gene89296:CDS 55.0%
TTTCCATCAGTGGGAGGAGC+GGG + chr7.1:37729907-37729926 None:intergenic 55.0%
! AGATGAGATCCAGGTGGTGG+AGG + chr7.1:37731539-37731558 None:intergenic 55.0%
! GGAGCGGGTAGAGGAAGTAT+AGG + chr7.1:37729892-37729911 None:intergenic 55.0%
!! AGATCCAGGTGGTGGAGGAA+TGG + chr7.1:37731534-37731553 None:intergenic 55.0%
!! ATGTGCATGTCTGGCCTTGG+TGG + chr7.1:37731389-37731408 None:intergenic 55.0%
!! CATGATGGTGGATGAGGGTG+AGG + chr7.1:37731593-37731612 None:intergenic 55.0%
!! GGAGGTGGTGGATGCATCAT+AGG + chr7.1:37731623-37731642 None:intergenic 55.0%
!! TGTGCATGTCTGGCCTTGGT+GGG + chr7.1:37731388-37731407 None:intergenic 55.0%
AAGGGAGGAGCTTCCTCAGG+TGG + chr7.1:37731671-37731690 None:intergenic 60.0%
AGATACCGCTGAGCCAGGGA+AGG - chr7.1:37730809-37730828 MS.gene89296:CDS 60.0%
AGCAAGGGAGGAGCTTCCTC+AGG + chr7.1:37731674-37731693 None:intergenic 60.0%
AGCTCCTCCCTTGCTTCCAG+AGG - chr7.1:37731679-37731698 MS.gene89296:CDS 60.0%
CACCACGCTCTCTCAAGGCT+AGG + chr7.1:37732012-37732031 None:intergenic 60.0%
GATACTCCTTGAGGCGGAGG+TGG + chr7.1:37731638-37731657 None:intergenic 60.0%
GGTGGGGATACTCCTTGAGG+CGG + chr7.1:37731644-37731663 None:intergenic 60.0%
GTATACTGCTCAGCCTCGGG+AGG + chr7.1:37730303-37730322 None:intergenic 60.0%
TCAGTTTCCGGTGCAGCCCT+AGG + chr7.1:37730207-37730226 None:intergenic 60.0%
TCTTGGGGAGGAGGTGATCG+AGG - chr7.1:37729927-37729946 MS.gene89296:CDS 60.0%
! GGGAATGAGAGCTGCTGGCT+TGG - chr7.1:37730878-37730897 MS.gene89296:CDS 60.0%
! GGTTCCTCTGGAAGCAAGGG+AGG + chr7.1:37731686-37731705 None:intergenic 60.0%
!! CTAGCCTTGAGAGAGCGTGG+TGG - chr7.1:37732010-37732029 MS.gene89296:CDS 60.0%
!! GTGCATGTCTGGCCTTGGTG+GGG + chr7.1:37731387-37731406 None:intergenic 60.0%
!! TCCCTAGCCTTGAGAGAGCG+TGG - chr7.1:37732007-37732026 MS.gene89296:CDS 60.0%
!! TGCATGTCTGGCCTTGGTGG+GGG + chr7.1:37731386-37731405 None:intergenic 60.0%
ACTCCTTGAGGCGGAGGTGG+TGG + chr7.1:37731635-37731654 None:intergenic 65.0%
CATCCACCACCTCCGCCTCA+AGG - chr7.1:37731629-37731648 MS.gene89296:CDS 65.0%
CTACCCGCTCCTCCCACTGA+TGG - chr7.1:37729901-37729920 MS.gene89296:CDS 65.0%
GCCTTCCAATGCCCCCACCA+AGG - chr7.1:37731372-37731391 MS.gene89296:CDS 65.0%
GGAGGAGCTTCCTCAGGTGG+CGG + chr7.1:37731668-37731687 None:intergenic 65.0%
GGCGGTGGGGATACTCCTTG+AGG + chr7.1:37731647-37731666 None:intergenic 65.0%
GGGGATACTCCTTGAGGCGG+AGG + chr7.1:37731641-37731660 None:intergenic 65.0%
TCAGTGGGAGGAGCGGGTAG+AGG + chr7.1:37729901-37729920 None:intergenic 65.0%
TGCATTGGAGAAGGGGGGGC+CGG + chr7.1:37731428-37731447 None:intergenic 65.0%
!! GCCTTGGTGGGGGCATTGGA+AGG + chr7.1:37731376-37731395 None:intergenic 65.0%
!! TCTGGCCTTGGTGGGGGCAT+TGG + chr7.1:37731380-37731399 None:intergenic 65.0%
! CTTCCTCAGGTGGCGGCGGT+GGG + chr7.1:37731661-37731680 None:intergenic 70.0%
! GGAGCTTCCTCAGGTGGCGG+CGG + chr7.1:37731665-37731684 None:intergenic 70.0%
! TTCCTCAGGTGGCGGCGGTG+GGG + chr7.1:37731660-37731679 None:intergenic 70.0%
ATCCCCACCGCCGCCACCTG+AGG - chr7.1:37731655-37731674 MS.gene89296:CDS 75.0%
! GCTTCCTCAGGTGGCGGCGG+TGG + chr7.1:37731662-37731681 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 37729886 37732045 37729886 ID=MS.gene89296
chr7.1 mRNA 37729886 37732045 37729886 ID=MS.gene89296.t1;Parent=MS.gene89296
chr7.1 exon 37729886 37732045 37729886 ID=MS.gene89296.t1.exon1;Parent=MS.gene89296.t1
chr7.1 CDS 37729886 37732045 37729886 ID=cds.MS.gene89296.t1;Parent=MS.gene89296.t1
Gene Sequence

>MS.gene89296

ATGCCTATACTTCCTCTACCCGCTCCTCCCACTGATGGAAATCTTGGGGAGGAGGTGATCGAGGAAGCAGCACCGACAACTGTTGCCACACACACTAGAACTATTGGAATAATTCACCCCCCTCCAGACATTAAAACCATTATTGATAAAACCTCTCGGTTTGTTGCTAAAATGGGTCTTGAATTTGAAAAGAGGATTATTGCTAATTATGCGGGCAATCCCAAGTTTAATTTCCTCAATCCATCTGACCCCTATCATGCATATTACCAGCACATGCTTTCTGAGTTTCGTAGTCAGAATCAATCTTCTACTCATAAACCTAGGGCTGCACCGGAAACTGATAGTATCGATGTAGCAACTACGGAGAAGCCTGATATTTCTGCCCGGTTTAAACCAGTAAAGAAAGTACTTGATCCTCCCGAGGCTGAGCAGTATACAGTTAGGCTTCCTGAAGGTATTACAAGGGAGGAGCTGGATATAATAAAGCTTACAACACAATTTGTGGCTCGTAATGGGAAATCCTTTTTGACAGGATTGACAAGTAGGGAGATTAATAACCCCCAATTTCATTTCATGAAACCAACTCATAGCATGTTTACATTTTTCACTTCCCTTGCTGATGCATATTCAAAGGTTTTGATGCCTCCAAAGGGGTTGACAGAGAAGCTAAAGAAGAGTGTCGACATGACTACCGTGCTTGAAAGATGTGTGAATAGGCTGGAATGGGAGCGTTCACTAGAGCAAGCTAGGAAAATGGCTGAAGATGAAATAGAGCAAGAAAGAATACAAATGGCTATGGTTGATTGGCATGATTTTGTGGTGGTTGAATCAATAGACTTTGCATATGATGAGGATGAAGAATTACCTCTTCCAATGACCCTTGAGGAGGTGATAAGGAGAAGTAAGATAACGCCTACGGAAGAAGATACCGCTGAGCCAGGGAAGGAAGTAGAAATGGAAATGGACGAGGAAGAGGCCCAACCTGTTGAAGAGGGAATGAGAGCTGCTGGCTTGGAAGACAATGATGAAGGGAAGAATAGTGAAGTCAGGGTTACCGAAGAATCTAAACCGCCGATCAGGATTGTGAAGAACTGGAAGAGACCAGAAGACAGGCTTCCTGCAGATAGAGATTCAACCAATTTTGCGGTTTCTCCCATCACCGGTGAACTGATTCCAATTAGTGAGATGTCAGAACACATGCGAATTTCTCTCATTGATCCTAAGTACAAAGAACAGAAAGAAAAGATGTTTGCCAAAATTCGAGAAACCACTCTGGCACATGATGATGAAATAGCAAAAAACATAGTTGGACTTGCCCAGACTCGTCCTGATATTTTTGGTACTACGGAGGAAGAGGTTTCCAATGCTGTTAAGGCTGAGATTGAGAAGAAAAATGATGAGAAACCTAAGCAGGTTATATGGGATGGTCACAGCGGTAGTATTGGTCCTATACATAACATACAGTATTATAATCCTAATAGCATTGGCCTTCCAATGCCCCCACCAAGGCCAGACATGCACATGATGCAATCTCTCGGGCCGGCCCCCCCTTCTCCAATGCAAATGACCGGTAGACAACCTTCCATGATGGGTGGTCAAACACCCCCATTGCATCCATCAATTCCTATGAATAACCAAGGAATTTCCATTCCTCCACCACCTGGATCTCATCTCACTCCTGTTCCTGTTCCACGACCTTTTGTTCCTCACCCTCATCCACCATCATGGATGATGCCTATGATGCATCCACCACCTCCGCCTCAAGGAGTATCCCCACCGCCGCCACCTGAGGAAGCTCCTCCCTTGCTTCCAGAGGAACCAGAACCAAAGAGGCAGAAGCATGACGATTCTGCTCTGATCCCTGAGGATAAATTTCTGTCTCAGCATCAGGGACCTGCTCGCATTAGTATATCTGTTCCTAATGTTGATGAAGGAAATCTCAAAGGACAAGTTCTGGAAATAACTGTGCAATCTCTGTCTGAATCTGTCGGCAGCCTGAAGGAAAAAATTGCTGGGGAGATCCGACTCCCTGCTAACAAGCAGAAATTGAGTGGAAAGCCAGGCTTTCTCAAGGACAAAATGTCACTTGCACATTACAATGTTAGTGGAGGAGAAACACTCTCCCTAGCCTTGAGAGAGCGTGGTGGTAGAAAGAGATGA
Protein sequence

>MS.gene89296.t1

MPILPLPAPPTDGNLGEEVIEEAAPTTVATHTRTIGIIHPPPDIKTIIDKTSRFVAKMGLEFEKRIIANYAGNPKFNFLNPSDPYHAYYQHMLSEFRSQNQSSTHKPRAAPETDSIDVATTEKPDISARFKPVKKVLDPPEAEQYTVRLPEGITREELDIIKLTTQFVARNGKSFLTGLTSREINNPQFHFMKPTHSMFTFFTSLADAYSKVLMPPKGLTEKLKKSVDMTTVLERCVNRLEWERSLEQARKMAEDEIEQERIQMAMVDWHDFVVVESIDFAYDEDEELPLPMTLEEVIRRSKITPTEEDTAEPGKEVEMEMDEEEAQPVEEGMRAAGLEDNDEGKNSEVRVTEESKPPIRIVKNWKRPEDRLPADRDSTNFAVSPITGELIPISEMSEHMRISLIDPKYKEQKEKMFAKIRETTLAHDDEIAKNIVGLAQTRPDIFGTTEEEVSNAVKAEIEKKNDEKPKQVIWDGHSGSIGPIHNIQYYNPNSIGLPMPPPRPDMHMMQSLGPAPPSPMQMTGRQPSMMGGQTPPLHPSIPMNNQGISIPPPPGSHLTPVPVPRPFVPHPHPPSWMMPMMHPPPPPQGVSPPPPPEEAPPLLPEEPEPKRQKHDDSALIPEDKFLSQHQGPARISISVPNVDEGNLKGQVLEITVQSLSESVGSLKEKIAGEIRLPANKQKLSGKPGFLKDKMSLAHYNVSGGETLSLALRERGGRKR