AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene89818

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89818.t1 MTR_8g106170 85.360 806 62 7 1 753 2 804 0.0 1149
MS.gene89818.t1 MTR_7g063860 83.962 424 41 3 338 753 23 427 0.0 523
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89818.t1 AT1G14650 64.669 801 219 16 1 753 1 785 0.0 838
MS.gene89818.t1 AT1G14650 64.669 801 219 16 1 753 1 785 0.0 838
MS.gene89818.t1 AT1G14650 64.669 801 219 16 1 753 1 785 0.0 838
MS.gene89818.t1 AT1G14640 58.278 755 256 17 1 716 1 735 0.0 691
MS.gene89818.t1 AT1G14640 58.278 755 256 17 1 716 1 735 0.0 691
MS.gene89818.t1 AT4G16200 34.409 279 117 7 37 249 10 288 2.18e-33 130
MS.gene89818.t1 AT5G06520 34.921 252 115 10 38 285 391 597 4.69e-31 130
MS.gene89818.t1 AT5G06520 32.515 163 87 5 153 313 79 220 3.62e-12 70.5
MS.gene89818.t1 AT5G12280 52.273 132 54 3 613 744 295 417 5.54e-30 124
MS.gene89818.t1 AT5G12280 27.490 251 136 5 44 293 89 294 5.47e-13 72.0
MS.gene89818.t1 AT5G06890 57.333 75 20 3 671 744 2 65 2.31e-16 74.3
MS.gene89818.t1 AT2G43960 27.519 258 153 8 44 292 9 241 3.58e-15 79.0
MS.gene89818.t1 AT3G49130 36.066 183 89 9 140 312 39 203 6.57e-14 73.9

Find 232 sgRNAs with CRISPR-Local

Find 257 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTGCAGTTTCTCGAATTT+TGG 0.159085 7.3:+41504300 None:intergenic
CTCTTTGGTTCTGGTTCCTT+TGG 0.222575 7.3:+41503653 None:intergenic
GATCCATGAGGATAAATTTC+TGG 0.232498 7.3:-41503606 MS.gene89818:CDS
TGTTCTGACATTTCCCTAAT+AGG 0.235424 7.3:+41504379 None:intergenic
TACTTCATCCTCTTTGGTTC+TGG 0.251478 7.3:+41503644 None:intergenic
AGCAGCCTAAGCAGATTATA+TGG 0.277899 7.3:-41504159 MS.gene89818:CDS
GATAGGAGAAACCACAAATT+TGG 0.286635 7.3:+41504417 None:intergenic
TCATCATACTTCATCCTCTT+TGG 0.287652 7.3:+41503638 None:intergenic
CTGGTTTCATGAAATGAAAT+TGG 0.294995 7.3:+41504992 None:intergenic
GGGAACGAGAGCTGCTAGTT+TGG 0.298170 7.3:-41504560 MS.gene89818:CDS
CCGGTGAACTGATTCCTATT+AGG 0.306650 7.3:-41504393 MS.gene89818:CDS
CTGAGACGCTTTATCGATAA+TGG 0.312615 7.3:+41505416 None:intergenic
GGATCAAGTACTTTCTTTAC+TGG 0.315349 7.3:+41505159 None:intergenic
AAGGGAAGAAGAGTGAAGTT+AGG 0.317466 7.3:-41504525 MS.gene89818:CDS
CTCAATTTCTGCTTGTTAGC+AGG 0.319229 7.3:+41503434 None:intergenic
GGTATTCCTTGGTTATTCAT+AGG 0.326661 7.3:+41503821 None:intergenic
CGGTGAACTGATTCCTATTA+GGG 0.326819 7.3:-41504392 MS.gene89818:CDS
ATTGGAAGGCCAATGCTATT+AGG 0.334626 7.3:+41503911 None:intergenic
AGCTTCTCTGTCAACCCCTT+TGG 0.339349 7.3:+41504907 None:intergenic
CAAGCAATGTCACAAAATAT+TGG 0.348373 7.3:-41504100 MS.gene89818:CDS
TACAAATTGCTATGATTGAT+TGG 0.348644 7.3:-41504768 MS.gene89818:CDS
TGGTTATTCATAGGAATTGA+TGG 0.349393 7.3:+41503830 None:intergenic
ACATCGATACTATCAGTTTC+CGG 0.350605 7.3:+41505222 None:intergenic
ACCTCACACACTAGAACTAT+TGG 0.352920 7.3:-41505468 MS.gene89818:CDS
CGATTAGGATTGTGAATAAC+TGG 0.353048 7.3:-41504480 MS.gene89818:CDS
TTAAACCGGGCAGAAATATC+AGG 0.353449 7.3:+41505183 None:intergenic
AGATTTCCTTCATCAACATT+AGG 0.356214 7.3:+41503545 None:intergenic
TCCTCCCTTGTAATGCCTTC+AGG 0.361482 7.3:+41505105 None:intergenic
TAAATTTCTGGCTCAGCATC+AGG 0.363323 7.3:-41503594 MS.gene89818:CDS
CACAATTTGTGGCTCGTAAT+GGG 0.363738 7.3:-41505059 MS.gene89818:CDS
GCTTCCTCAGGAGGTGGCGG+TGG 0.365030 7.3:+41503689 None:intergenic
TGGTTTCATGAAATGAAATT+GGG 0.368296 7.3:+41504993 None:intergenic
CTTTCTTTACTGGTTTAAAC+CGG 0.371124 7.3:+41505169 None:intergenic
ACAAGAGCACTCTAGGAAAA+AGG 0.374143 7.3:-41504818 MS.gene89818:CDS
ACAATCCTAATCGGTGGTTC+AGG 0.375962 7.3:+41504490 None:intergenic
ATATGCAGGAAGCCTGTCTT+CGG 0.386494 7.3:+41504450 None:intergenic
AAATCTCAAAGGACAAGTTC+TGG 0.387127 7.3:-41503528 MS.gene89818:CDS
GTGCTGGTAATATGCATGAT+AGG 0.389377 7.3:+41505302 None:intergenic
TCGATAATGGTTCTAATGTC+TGG 0.393863 7.3:+41505429 None:intergenic
CAGTTATTCACAATCCTAAT+CGG 0.396142 7.3:+41504481 None:intergenic
CGTTCCCTCTTCAACAAGTT+GGG 0.404253 7.3:+41504576 None:intergenic
AGAGGTTTCCAATGCTGTTA+AGG 0.406420 7.3:-41504206 MS.gene89818:CDS
AGGGAAGAAGAGTGAAGTTA+GGG 0.411237 7.3:-41504524 MS.gene89818:CDS
TGTGCATGCCTGGTCTTGGT+GGG 0.420984 7.3:+41503885 None:intergenic
TAGAGATTCAACCAAATTTG+TGG 0.421417 7.3:-41504428 MS.gene89818:CDS
ATGTGCATGCCTGGTCTTGG+TGG 0.427467 7.3:+41503884 None:intergenic
TTCTCTGTCAACCCCTTTGG+AGG 0.429998 7.3:+41504910 None:intergenic
GGAGGAGGTGCAGCAGGACC+AGG 0.431521 7.3:+41504031 None:intergenic
CTTGCACATTACAATGTTAG+TGG 0.432552 7.3:-41503377 MS.gene89818:CDS
CCTCCCACTGATCGAAATCT+TGG 0.434890 7.3:-41505528 MS.gene89818:CDS
GATGTGTGAATAGGCTAGAA+TGG 0.434898 7.3:-41504849 MS.gene89818:CDS
CCTCACCCTCATCCACCATC+AGG 0.435685 7.3:-41503758 MS.gene89818:CDS
ATCATGTGCATGCCTGGTCT+TGG 0.437697 7.3:+41503881 None:intergenic
AAAGCTTACAGCACAATTTG+TGG 0.438501 7.3:-41505070 MS.gene89818:CDS
TGCATGCCTGGTCTTGGTGG+GGG 0.438941 7.3:+41503887 None:intergenic
CTTCCTCAGGAGGTGGCGGT+GGG 0.441197 7.3:+41503690 None:intergenic
TAGGAATTGATGGATGCATT+GGG 0.444523 7.3:+41503840 None:intergenic
ATCACCTCCTCAAGTGTCAT+TGG 0.449631 7.3:+41504682 None:intergenic
AAGACCCTGAACCACCGATT+AGG 0.454157 7.3:-41504495 MS.gene89818:CDS
AATTTCAGCCTTAACAGCAT+TGG 0.456041 7.3:+41504198 None:intergenic
GGATGAGGGTGAGGAACATA+AGG 0.458423 7.3:+41503767 None:intergenic
GCACAATTTGTGGCTCGTAA+TGG 0.460668 7.3:-41505060 MS.gene89818:CDS
TATGCAGGAAGCCTGTCTTC+GGG 0.463345 7.3:+41504451 None:intergenic
GGAATCAGTTCACCGGTGAT+AGG 0.466222 7.3:+41504400 None:intergenic
TCTTTCTGTTCTTTGTACTT+CGG 0.466761 7.3:+41504334 None:intergenic
GGTATGGAAGGAAGTAGAAA+TGG 0.466847 7.3:-41504617 MS.gene89818:CDS
GAAGGAAGTAGAAATGGAAA+TGG 0.467583 7.3:-41504611 MS.gene89818:CDS
GTGTGTGAGGTAACAGTTAT+CGG 0.468066 7.3:+41505480 None:intergenic
GGTCTTGGAGGAGGTGCAGC+AGG 0.470671 7.3:+41504025 None:intergenic
TCGTTCCCTCTTCAACAAGT+TGG 0.470849 7.3:+41504575 None:intergenic
TGGATTGAGGAAATTAAACT+TGG 0.471770 7.3:+41505332 None:intergenic
TCAATTTCTGCTTGTTAGCA+GGG 0.474049 7.3:+41503435 None:intergenic
GGGGATACTCCGTGAGGCAG+AGG 0.476321 7.3:+41503710 None:intergenic
GTGAACTGAGATCCAGGTGG+TGG 0.477028 7.3:+41503791 None:intergenic
TCAGTTTCCGGTGCAGCCCT+AGG 0.479497 7.3:+41505234 None:intergenic
AACTGTATACTGCTCAGCCT+CGG 0.479959 7.3:+41505134 None:intergenic
GGAGCTTCCTCAGGAGGTGG+CGG 0.481607 7.3:+41503686 None:intergenic
ACTCCGTGAGGCAGAGGTGG+TGG 0.484958 7.3:+41503716 None:intergenic
GGCTTCCTGAAGGCATTACA+AGG 0.485693 7.3:-41505110 MS.gene89818:CDS
GATTGCATCATGTGCATGCC+TGG 0.488108 7.3:+41503875 None:intergenic
AGGATTATTGCTAATTATGC+GGG 0.488493 7.3:-41505360 MS.gene89818:CDS
TTGGTTGAATCTCTATATGC+AGG 0.488704 7.3:+41504436 None:intergenic
AGATGATGCTGAGGTATGGA+AGG 0.495806 7.3:-41504629 MS.gene89818:CDS
AGCGAGGGAGGAGCTTCCTC+AGG 0.496092 7.3:+41503677 None:intergenic
AGTGTTCACAAGAGCACTCT+AGG 0.496209 7.3:-41504825 MS.gene89818:CDS
CCTTGCTGATGCATATTCAA+AGG 0.496930 7.3:-41504941 MS.gene89818:CDS
TTTCGATCAGTGGGAGGAGC+GGG 0.498622 7.3:+41505534 None:intergenic
ACTGTATACTGCTCAGCCTC+GGG 0.500711 7.3:+41505135 None:intergenic
ATAGGAATTGATGGATGCAT+TGG 0.501574 7.3:+41503839 None:intergenic
GGACGAACTGAAGGCATACC+AGG 0.501660 7.3:+41504004 None:intergenic
ATGTGTGAATAGGCTAGAAT+GGG 0.505142 7.3:-41504848 MS.gene89818:CDS
CAATCCTAATCGGTGGTTCA+GGG 0.505409 7.3:+41504491 None:intergenic
TGACACTTGAGGAGGTGATA+AGG 0.505752 7.3:-41504678 MS.gene89818:CDS
AATCTTCTACTCATAAACCT+AGG 0.508510 7.3:-41505251 MS.gene89818:CDS
ATATTGTCCTTGAGAAAGCC+TGG 0.508540 7.3:+41503404 None:intergenic
TAAGGAATTCTCATCATGCT+AGG 0.509471 7.3:-41505579 None:intergenic
GTGCATGCCTGGTCTTGGTG+GGG 0.510444 7.3:+41503886 None:intergenic
TTCTGGTTCCTTTGGAAGCG+AGG 0.510904 7.3:+41503661 None:intergenic
AATGGAAATGGACGAGGAAG+AGG 0.514865 7.3:-41504599 MS.gene89818:CDS
ATGGTCTTGAATTCGAAAAG+AGG 0.517310 7.3:-41505380 MS.gene89818:CDS
TCAGTGGGAGGAGCGGGTAA+AGG 0.517550 7.3:+41505540 None:intergenic
CAGAAATTGAGTGGAAAGCC+AGG 0.519574 7.3:-41503422 MS.gene89818:CDS
TCTGTTCCTAATGTTGATGA+AGG 0.520094 7.3:-41503551 MS.gene89818:CDS
AACTGAGATCCAGGTGGTGG+GGG 0.520860 7.3:+41503794 None:intergenic
GGAGCGGGTAAAGGAAGTAT+AGG 0.521350 7.3:+41505549 None:intergenic
GCAGCCTAAGCAGATTATAT+GGG 0.521470 7.3:-41504158 MS.gene89818:CDS
GATGGTCACAACGGTAGTAT+TGG 0.522599 7.3:-41504136 MS.gene89818:CDS
TCATAAACCTAGGGCTGCAC+CGG 0.523333 7.3:-41505241 MS.gene89818:CDS
TGAACTGAGATCCAGGTGGT+GGG 0.523393 7.3:+41503792 None:intergenic
CCATCCCATATAATCTGCTT+AGG 0.523915 7.3:+41504154 None:intergenic
AAGAAGATGATGCTGAGGTA+TGG 0.524078 7.3:-41504633 MS.gene89818:CDS
GGAGGAGCTTCCTCAGGAGG+TGG 0.524586 7.3:+41503683 None:intergenic
TAAGGAGTGAACTGAGATCC+AGG 0.526111 7.3:+41503785 None:intergenic
ACATTGCTTGGTTTGCAGTA+CGG 0.529795 7.3:+41504113 None:intergenic
TGCTGGTAATATGCATGATA+GGG 0.530338 7.3:+41505303 None:intergenic
TCCTCAAGTGTCATTGGAGG+AGG 0.532277 7.3:+41504688 None:intergenic
CGTCCTCTTCAGCCACCACC+TGG 0.532603 7.3:-41503986 MS.gene89818:CDS
ATCATCCCTGATGGTGGATG+AGG 0.533964 7.3:+41503752 None:intergenic
AGTCCAGGTGGTGGCTGAAG+AGG 0.534175 7.3:+41503983 None:intergenic
GAAGGCATACCAGGTCTTGG+AGG 0.534350 7.3:+41504013 None:intergenic
AGTACAAAGAACAGAAAGAA+AGG 0.535684 7.3:-41504330 MS.gene89818:CDS
ACTGAAGGCATACCAGGTCT+TGG 0.536230 7.3:+41504010 None:intergenic
GCGAAACAAGATAACGCCTA+TGG 0.538384 7.3:-41504656 MS.gene89818:CDS
TATGCATGATAGGGGTCAGA+TGG 0.541297 7.3:+41505312 None:intergenic
GAGGAGGTGCAGCAGGACCA+GGG 0.541548 7.3:+41504032 None:intergenic
TTTGTGGTTTCTCCTATCAC+CGG 0.544417 7.3:-41504412 MS.gene89818:CDS
TTCTGACGGGATTGACAAGT+CGG 0.544780 7.3:-41505029 MS.gene89818:CDS
GATACTCCGTGAGGCAGAGG+TGG 0.546245 7.3:+41503713 None:intergenic
TGCACATGATGCAATCTCTC+CGG 0.546274 7.3:-41503868 MS.gene89818:CDS
AGGCTGAGCAGTATACAGTT+AGG 0.547036 7.3:-41505131 MS.gene89818:CDS
CACCACGCTCTCTCAAGGCT+AGG 0.548324 7.3:+41503339 None:intergenic
AGTTTGGAAGACAATGATGA+AGG 0.550080 7.3:-41504544 MS.gene89818:CDS
AGCTCCTCCCTCGCTTCCAA+AGG 0.552670 7.3:-41503669 MS.gene89818:CDS
GAGCCAGAAATTTATCCTCA+TGG 0.553389 7.3:+41503603 None:intergenic
ACCTCCTCAAGTGTCATTGG+AGG 0.553642 7.3:+41504685 None:intergenic
TCTGGTTCCTTTGGAAGCGA+GGG 0.554206 7.3:+41503662 None:intergenic
AATTCTAATCCTAATAGCAT+TGG 0.556431 7.3:-41503920 MS.gene89818:CDS
GTCACAAAATATTGGAAGTG+AGG 0.557834 7.3:-41504092 MS.gene89818:CDS
TCAGCATCATCTTCTTCCAT+AGG 0.558125 7.3:+41504640 None:intergenic
TATCGGTGCTGCTTCCTCGA+TGG 0.559008 7.3:+41505497 None:intergenic
AATGTAAACATGTTGTGAGC+TGG 0.559816 7.3:+41504973 None:intergenic
GGCATACCAGGTCTTGGAGG+AGG 0.561127 7.3:+41504016 None:intergenic
TCTGACGGGATTGACAAGTC+GGG 0.563675 7.3:-41505028 MS.gene89818:CDS
AATGGGAAATCCTTTCTGAC+GGG 0.564614 7.3:-41505042 MS.gene89818:CDS
ACTTGTCAATCCCGTCAGAA+AGG 0.566743 7.3:+41505032 None:intergenic
GGTTCCTTTGGAAGCGAGGG+AGG 0.567077 7.3:+41503665 None:intergenic
GAATTCTGCATGTTATGCAT+AGG 0.567763 7.3:+41503938 None:intergenic
GAACTGAGATCCAGGTGGTG+GGG 0.568017 7.3:+41503793 None:intergenic
TCTACCACCACGCTCTCTCA+AGG 0.569307 7.3:+41503334 None:intergenic
ATCTTCTACTCATAAACCTA+GGG 0.571317 7.3:-41505250 MS.gene89818:CDS
TCCAATAGTTCTAGTGTGTG+AGG 0.573333 7.3:+41505467 None:intergenic
ACTGGAAGAGACCCGAAGAC+AGG 0.573551 7.3:-41504462 MS.gene89818:CDS
GATAGGGGTCAGATGGATTG+AGG 0.573806 7.3:+41505319 None:intergenic
ATGGTTCTAATGTCTGGAGG+GGG 0.574125 7.3:+41505435 None:intergenic
GAGGATTATTGCTAATTATG+CGG 0.574782 7.3:-41505361 MS.gene89818:CDS
GAGGGAGGAGCTTCCTCAGG+AGG 0.575398 7.3:+41503680 None:intergenic
GGACCAAGATTTCGATCAGT+GGG 0.576987 7.3:+41505525 None:intergenic
ACAGATATACTGATGCGAGC+AGG 0.578610 7.3:+41503569 None:intergenic
ATCCCCACCGCCACCTCCTG+AGG 0.579478 7.3:-41503693 MS.gene89818:CDS
TTCCTCAGGAGGTGGCGGTG+GGG 0.580148 7.3:+41503691 None:intergenic
GGTTTCATGAAATGAAATTG+GGG 0.580899 7.3:+41504994 None:intergenic
TAATGGGAAATCCTTTCTGA+CGG 0.581173 7.3:-41505043 MS.gene89818:CDS
AGTAGAAATGGAAATGGACG+AGG 0.582780 7.3:-41504605 MS.gene89818:CDS
CAATCTCTGTCTGAAACTGT+TGG 0.583138 7.3:-41503494 MS.gene89818:CDS
TGCTTGAAAGATGTGTGAAT+AGG 0.583530 7.3:-41504858 MS.gene89818:CDS
AGAGGCCCAACTTGTTGAAG+AGG 0.583627 7.3:-41504581 MS.gene89818:CDS
GTTTGGAAGACAATGATGAA+GGG 0.585538 7.3:-41504543 MS.gene89818:CDS
CCTGATGGTGGATGAGGGTG+AGG 0.585720 7.3:+41503758 None:intergenic
TAGTATCGATGTAGCAACTA+CGG 0.586896 7.3:-41505211 MS.gene89818:CDS
GGCTGAAGAGGACGAACTGA+AGG 0.586934 7.3:+41503995 None:intergenic
AGGACCAAGATTTCGATCAG+TGG 0.588527 7.3:+41505524 None:intergenic
GAAACTCAGAAAGCATGTGC+TGG 0.588759 7.3:+41505286 None:intergenic
GGATTGAGGAAATTAAACTT+GGG 0.589490 7.3:+41505333 None:intergenic
GCTGCACCTCCTCCAAGACC+TGG 0.589894 7.3:-41504022 MS.gene89818:CDS
AGCATTGGAAACCTCTTCCT+CGG 0.590624 7.3:+41504213 None:intergenic
ACCACGCTCTCTCAAGGCTA+GGG 0.592917 7.3:+41503340 None:intergenic
TTCAAAGCTAGTCCAGGTGG+TGG 0.595138 7.3:+41503974 None:intergenic
GCTGCTTCCTCGATGGAGAG+AGG 0.597908 7.3:+41505504 None:intergenic
CCTAATAGGAATCAGTTCAC+CGG 0.597939 7.3:+41504393 None:intergenic
GGTAGATTCAAAGCTAGTCC+AGG 0.601016 7.3:+41503968 None:intergenic
TGAAACTGTTGGCAGCCTGA+AGG 0.606065 7.3:-41503483 MS.gene89818:CDS
CTCACCCTCATCCACCATCA+GGG 0.607170 7.3:-41503757 MS.gene89818:CDS
GTTGATGAAGGAAATCTCAA+AGG 0.607889 7.3:-41503539 MS.gene89818:CDS
TGGAAAGCCAGGCTTTCTCA+AGG 0.611679 7.3:-41503411 MS.gene89818:CDS
TAATGGTTCTAATGTCTGGA+GGG 0.613198 7.3:+41505433 None:intergenic
ATAAGCATCATCCCTGATGG+TGG 0.613914 7.3:+41503746 None:intergenic
ATTTCGATCAGTGGGAGGAG+CGG 0.614809 7.3:+41505533 None:intergenic
ATCATAAGCATCATCCCTGA+TGG 0.614902 7.3:+41503743 None:intergenic
CATCCACCACCTCTGCCTCA+CGG 0.615672 7.3:-41503719 MS.gene89818:CDS
GAGGCCCAACTTGTTGAAGA+GGG 0.616284 7.3:-41504580 MS.gene89818:CDS
TCCCTAGCCTTGAGAGAGCG+TGG 0.616920 7.3:-41503341 MS.gene89818:CDS
CAAAATTCGAGAAACTGCAC+AGG 0.617284 7.3:-41504299 MS.gene89818:CDS
GGAATTGATGGATGCATTGG+GGG 0.617363 7.3:+41503842 None:intergenic
GCTAACAAGCAGAAATTGAG+TGG 0.618988 7.3:-41503431 MS.gene89818:CDS
CAAAGGAACCAGAACCAAAG+AGG 0.621379 7.3:-41503652 MS.gene89818:CDS
AGAAGCCTGATATTTCTGCC+CGG 0.622543 7.3:-41505188 MS.gene89818:CDS
AATGGTTCTAATGTCTGGAG+GGG 0.624614 7.3:+41505434 None:intergenic
TCAATTCCTATGAATAACCA+AGG 0.629776 7.3:-41503827 MS.gene89818:CDS
TTTCTTTACTGGTTTAAACC+GGG 0.630709 7.3:+41505170 None:intergenic
CCTAAGCAGATTATATGGGA+TGG 0.630784 7.3:-41504154 MS.gene89818:CDS
ATTCACACATCTTTCAAGCA+CGG 0.630916 7.3:+41504861 None:intergenic
AGGAATTGATGGATGCATTG+GGG 0.631433 7.3:+41503841 None:intergenic
TCCTGAAGGCATTACAAGGG+AGG 0.633482 7.3:-41505106 MS.gene89818:CDS
GTTTCATGAAATGAAATTGG+GGG 0.634263 7.3:+41504995 None:intergenic
AAATTTCTGGCTCAGCATCA+GGG 0.634384 7.3:-41503593 MS.gene89818:CDS
CCTTTGAATATGCATCAGCA+AGG 0.634998 7.3:+41504941 None:intergenic
GCACATTACAATGTTAGTGG+AGG 0.635245 7.3:-41503374 MS.gene89818:CDS
CTTTGAATATGCATCAGCAA+GGG 0.636298 7.3:+41504942 None:intergenic
ATAATGGTTCTAATGTCTGG+AGG 0.636775 7.3:+41505432 None:intergenic
ACCTCCTCCAATGACACTTG+AGG 0.642711 7.3:-41504689 MS.gene89818:CDS
GTATACTGCTCAGCCTCGGG+AGG 0.644159 7.3:+41505138 None:intergenic
TTATTCACAATCCTAATCGG+TGG 0.645627 7.3:+41504484 None:intergenic
AATAGACTTTGCTGATGATG+AGG 0.647412 7.3:-41504722 MS.gene89818:CDS
TCCTCCAATGACACTTGAGG+AGG 0.650135 7.3:-41504686 MS.gene89818:CDS
TGGTTCTAATGTCTGGAGGG+GGG 0.655443 7.3:+41505436 None:intergenic
CCAAGATTTCGATCAGTGGG+AGG 0.656947 7.3:+41505528 None:intergenic
GCTTCCTGAAGGCATTACAA+GGG 0.666795 7.3:-41505109 MS.gene89818:CDS
TCATCCCTGATGGTGGATGA+GGG 0.667117 7.3:+41503753 None:intergenic
TATACAGTTAGGCTTCCTGA+AGG 0.674309 7.3:-41505120 MS.gene89818:CDS
GGCGGTGGGGATACTCCGTG+AGG 0.680729 7.3:+41503704 None:intergenic
TATGGAAGAAGATGATGCTG+AGG 0.681247 7.3:-41504638 MS.gene89818:CDS
ATTATATGGGATGGTCACAA+CGG 0.682819 7.3:-41504145 MS.gene89818:CDS
GAAAGTACTTGATCCTCCCG+AGG 0.684311 7.3:-41505151 MS.gene89818:CDS
CTAGCCTTGAGAGAGCGTGG+TGG 0.691451 7.3:-41503338 MS.gene89818:CDS
AGATTCAAAGCTAGTCCAGG+TGG 0.698870 7.3:+41503971 None:intergenic
TCTTGGTCCTCTCTCCATCG+AGG 0.699779 7.3:-41505511 MS.gene89818:CDS
TGATTCTGCTCTGATCCATG+AGG 0.703630 7.3:-41503618 MS.gene89818:CDS
GAGGTGCAGCAGGACCAGGG+AGG 0.710329 7.3:+41504035 None:intergenic
GCTGGTAATATGCATGATAG+GGG 0.722069 7.3:+41505304 None:intergenic
CTAGCTTTGAATCTACCTCG+TGG 0.727501 7.3:-41503962 MS.gene89818:CDS
ATGTTATGCATAGGACCACG+AGG 0.777679 7.3:+41503947 None:intergenic
GGAGTGAACTGAGATCCAGG+TGG 0.832532 7.3:+41503788 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AATTCTAATCCTAATAGCAT+TGG - chr7.3:41504969-41504988 MS.gene89818:CDS 25.0%
! TACAAATTGCTATGATTGAT+TGG - chr7.3:41504121-41504140 MS.gene89818:CDS 25.0%
! TGAAATCTCAAAAAACATTG+TGG - chr7.3:41504617-41504636 MS.gene89818:CDS 25.0%
! TGGTTTCATGAAATGAAATT+GGG + chr7.3:41503899-41503918 None:intergenic 25.0%
AATCTTCTACTCATAAACCT+AGG - chr7.3:41503638-41503657 MS.gene89818:CDS 30.0%
AGATTTCCTTCATCAACATT+AGG + chr7.3:41505347-41505366 None:intergenic 30.0%
AGGATTATTGCTAATTATGC+GGG - chr7.3:41503529-41503548 MS.gene89818:CDS 30.0%
AGTACAAAGAACAGAAAGAA+AGG - chr7.3:41504559-41504578 MS.gene89818:CDS 30.0%
ATCTTCTACTCATAAACCTA+GGG - chr7.3:41503639-41503658 MS.gene89818:CDS 30.0%
CAAGCAATGTCACAAAATAT+TGG - chr7.3:41504789-41504808 MS.gene89818:CDS 30.0%
CAGTTATTCACAATCCTAAT+CGG + chr7.3:41504411-41504430 None:intergenic 30.0%
CTGGTTTCATGAAATGAAAT+TGG + chr7.3:41503900-41503919 None:intergenic 30.0%
GAGGATTATTGCTAATTATG+CGG - chr7.3:41503528-41503547 MS.gene89818:CDS 30.0%
GGATTGAGGAAATTAAACTT+GGG + chr7.3:41503559-41503578 None:intergenic 30.0%
GGTTTCATGAAATGAAATTG+GGG + chr7.3:41503898-41503917 None:intergenic 30.0%
GTTTCATGAAATGAAATTGG+GGG + chr7.3:41503897-41503916 None:intergenic 30.0%
TAGAGATTCAACCAAATTTG+TGG - chr7.3:41504461-41504480 MS.gene89818:CDS 30.0%
TCAATTCCTATGAATAACCA+AGG - chr7.3:41505062-41505081 MS.gene89818:CDS 30.0%
TCTTTCTGTTCTTTGTACTT+CGG + chr7.3:41504558-41504577 None:intergenic 30.0%
TGGATTGAGGAAATTAAACT+TGG + chr7.3:41503560-41503579 None:intergenic 30.0%
TGGTTATTCATAGGAATTGA+TGG + chr7.3:41505062-41505081 None:intergenic 30.0%
! CAATATTTTGTGACATTGCT+TGG + chr7.3:41504791-41504810 None:intergenic 30.0%
!! CTTTCTTTACTGGTTTAAAC+CGG + chr7.3:41503723-41503742 None:intergenic 30.0%
!! TTTCTTTACTGGTTTAAACC+GGG + chr7.3:41503722-41503741 None:intergenic 30.0%
AAAGCTTACAGCACAATTTG+TGG - chr7.3:41503819-41503838 MS.gene89818:CDS 35.0%
AAATCTCAAAGGACAAGTTC+TGG - chr7.3:41505361-41505380 MS.gene89818:CDS 35.0%
AATGAATCTAAAAACCTCCC+TGG - chr7.3:41504840-41504859 MS.gene89818:CDS 35.0%
AATGTAAACATGTTGTGAGC+TGG + chr7.3:41503919-41503938 None:intergenic 35.0%
AATTTCAGCCTTAACAGCAT+TGG + chr7.3:41504694-41504713 None:intergenic 35.0%
ACATCGATACTATCAGTTTC+CGG + chr7.3:41503670-41503689 None:intergenic 35.0%
AGTTTGGAAGACAATGATGA+AGG - chr7.3:41504345-41504364 MS.gene89818:CDS 35.0%
ATGTGTGAATAGGCTAGAAT+GGG - chr7.3:41504041-41504060 MS.gene89818:CDS 35.0%
ATTATATGGGATGGTCACAA+CGG - chr7.3:41504744-41504763 MS.gene89818:CDS 35.0%
ATTCACACATCTTTCAAGCA+CGG + chr7.3:41504031-41504050 None:intergenic 35.0%
CGATTAGGATTGTGAATAAC+TGG - chr7.3:41504409-41504428 MS.gene89818:CDS 35.0%
CTTGCACATTACAATGTTAG+TGG - chr7.3:41505512-41505531 MS.gene89818:CDS 35.0%
CTTTGAATATGCATCAGCAA+GGG + chr7.3:41503950-41503969 None:intergenic 35.0%
GAAGGAAGTAGAAATGGAAA+TGG - chr7.3:41504278-41504297 MS.gene89818:CDS 35.0%
GAATTCTGCATGTTATGCAT+AGG + chr7.3:41504954-41504973 None:intergenic 35.0%
GATAGGAGAAACCACAAATT+TGG + chr7.3:41504475-41504494 None:intergenic 35.0%
GATCCATGAGGATAAATTTC+TGG - chr7.3:41505283-41505302 MS.gene89818:CDS 35.0%
GGATCAAGTACTTTCTTTAC+TGG + chr7.3:41503733-41503752 None:intergenic 35.0%
GGTATTCCTTGGTTATTCAT+AGG + chr7.3:41505071-41505090 None:intergenic 35.0%
GTCACAAAATATTGGAAGTG+AGG - chr7.3:41504797-41504816 MS.gene89818:CDS 35.0%
GTTTGGAAGACAATGATGAA+GGG - chr7.3:41504346-41504365 MS.gene89818:CDS 35.0%
TAATGGGAAATCCTTTCTGA+CGG - chr7.3:41503846-41503865 MS.gene89818:CDS 35.0%
TCATCATACTTCATCCTCTT+TGG + chr7.3:41505254-41505273 None:intergenic 35.0%
TCGGTAGTACCAAAAATATC+AGG + chr7.3:41504660-41504679 None:intergenic 35.0%
TCTCAGTTCGTTGCTAAAAA+TGG - chr7.3:41503490-41503509 MS.gene89818:CDS 35.0%
TGCTGGTAATATGCATGATA+GGG + chr7.3:41503589-41503608 None:intergenic 35.0%
TGCTTGAAAGATGTGTGAAT+AGG - chr7.3:41504031-41504050 MS.gene89818:CDS 35.0%
TGTTCTGACATTTCCCTAAT+AGG + chr7.3:41504513-41504532 None:intergenic 35.0%
TTATTCACAATCCTAATCGG+TGG + chr7.3:41504408-41504427 None:intergenic 35.0%
TTGGTTGAATCTCTATATGC+AGG + chr7.3:41504456-41504475 None:intergenic 35.0%
! AATAGACTTTGCTGATGATG+AGG - chr7.3:41504167-41504186 MS.gene89818:CDS 35.0%
! ATAGGAATTGATGGATGCAT+TGG + chr7.3:41505053-41505072 None:intergenic 35.0%
! ATGGTCTTGAATTCGAAAAG+AGG - chr7.3:41503509-41503528 MS.gene89818:CDS 35.0%
! GATTGATTGGCATGATTTTG+TGG - chr7.3:41504134-41504153 MS.gene89818:CDS 35.0%
! GTTGATGAAGGAAATCTCAA+AGG - chr7.3:41505350-41505369 MS.gene89818:CDS 35.0%
! TAGGAATTGATGGATGCATT+GGG + chr7.3:41505052-41505071 None:intergenic 35.0%
! TCAATTTCTGCTTGTTAGCA+GGG + chr7.3:41505457-41505476 None:intergenic 35.0%
! TCTGTTCCTAATGTTGATGA+AGG - chr7.3:41505338-41505357 MS.gene89818:CDS 35.0%
!! ATAATGGTTCTAATGTCTGG+AGG + chr7.3:41503460-41503479 None:intergenic 35.0%
!! TAATGGTTCTAATGTCTGGA+GGG + chr7.3:41503459-41503478 None:intergenic 35.0%
!! TAGTATCGATGTAGCAACTA+CGG - chr7.3:41503678-41503697 MS.gene89818:CDS 35.0%
!! TCGATAATGGTTCTAATGTC+TGG + chr7.3:41503463-41503482 None:intergenic 35.0%
!!! TGATATTTTTGGTACTACCG+AGG - chr7.3:41504659-41504678 MS.gene89818:CDS 35.0%
AAGAAGATGATGCTGAGGTA+TGG - chr7.3:41504256-41504275 MS.gene89818:CDS 40.0%
AAGGGAAGAAGAGTGAAGTT+AGG - chr7.3:41504364-41504383 MS.gene89818:CDS 40.0%
AATGGGAAATCCTTTCTGAC+GGG - chr7.3:41503847-41503866 MS.gene89818:CDS 40.0%
ACCTCACACACTAGAACTAT+TGG - chr7.3:41503421-41503440 MS.gene89818:CDS 40.0%
AGAGGTTTCCAATGCTGTTA+AGG - chr7.3:41504683-41504702 MS.gene89818:CDS 40.0%
AGCAGCCTAAGCAGATTATA+TGG - chr7.3:41504730-41504749 MS.gene89818:CDS 40.0%
AGCCTGAAGGAAAAAATTGC+TGG - chr7.3:41505419-41505438 MS.gene89818:CDS 40.0%
AGGGAAGAAGAGTGAAGTTA+GGG - chr7.3:41504365-41504384 MS.gene89818:CDS 40.0%
AGTAGAAATGGAAATGGACG+AGG - chr7.3:41504284-41504303 MS.gene89818:CDS 40.0%
ATATTGTCCTTGAGAAAGCC+TGG + chr7.3:41505488-41505507 None:intergenic 40.0%
ATCATAAGCATCATCCCTGA+TGG + chr7.3:41505149-41505168 None:intergenic 40.0%
ATTGGAAGGCCAATGCTATT+AGG + chr7.3:41504981-41505000 None:intergenic 40.0%
CAAAATTCGAGAAACTGCAC+AGG - chr7.3:41504590-41504609 MS.gene89818:CDS 40.0%
CACAATTTGTGGCTCGTAAT+GGG - chr7.3:41503830-41503849 MS.gene89818:CDS 40.0%
CCATCCCATATAATCTGCTT+AGG + chr7.3:41504738-41504757 None:intergenic 40.0%
CCTAAGCAGATTATATGGGA+TGG - chr7.3:41504735-41504754 MS.gene89818:CDS 40.0%
CCTAATAGGAATCAGTTCAC+CGG + chr7.3:41504499-41504518 None:intergenic 40.0%
CCTGAAGGAAAAAATTGCTG+GGG - chr7.3:41505421-41505440 MS.gene89818:CDS 40.0%
CCTTGCTGATGCATATTCAA+AGG - chr7.3:41503948-41503967 MS.gene89818:CDS 40.0%
CCTTTGAATATGCATCAGCA+AGG + chr7.3:41503951-41503970 None:intergenic 40.0%
CTGAGACGCTTTATCGATAA+TGG + chr7.3:41503476-41503495 None:intergenic 40.0%
GAGCCAGAAATTTATCCTCA+TGG + chr7.3:41505289-41505308 None:intergenic 40.0%
GATGTGTGAATAGGCTAGAA+TGG - chr7.3:41504040-41504059 MS.gene89818:CDS 40.0%
GCACATTACAATGTTAGTGG+AGG - chr7.3:41505515-41505534 MS.gene89818:CDS 40.0%
GCAGCCTAAGCAGATTATAT+GGG - chr7.3:41504731-41504750 MS.gene89818:CDS 40.0%
GCCTGAAGGAAAAAATTGCT+GGG - chr7.3:41505420-41505439 MS.gene89818:CDS 40.0%
GCTAACAAGCAGAAATTGAG+TGG - chr7.3:41505458-41505477 MS.gene89818:CDS 40.0%
GCTGGTAATATGCATGATAG+GGG + chr7.3:41503588-41503607 None:intergenic 40.0%
GGTATGGAAGGAAGTAGAAA+TGG - chr7.3:41504272-41504291 MS.gene89818:CDS 40.0%
GTGTGTGAGGTAACAGTTAT+CGG + chr7.3:41503412-41503431 None:intergenic 40.0%
TATACAGTTAGGCTTCCTGA+AGG - chr7.3:41503769-41503788 MS.gene89818:CDS 40.0%
TATGGAAGAAGATGATGCTG+AGG - chr7.3:41504251-41504270 MS.gene89818:CDS 40.0%
TCAGCATCATCTTCTTCCAT+AGG + chr7.3:41504252-41504271 None:intergenic 40.0%
TTAAACCGGGCAGAAATATC+AGG + chr7.3:41503709-41503728 None:intergenic 40.0%
TTTGTGGTTTCTCCTATCAC+CGG - chr7.3:41504477-41504496 MS.gene89818:CDS 40.0%
! AGGAATTGATGGATGCATTG+GGG + chr7.3:41505051-41505070 None:intergenic 40.0%
! CAATCTCTGTCTGAAACTGT+TGG - chr7.3:41505395-41505414 MS.gene89818:CDS 40.0%
! CGGTGAACTGATTCCTATTA+GGG - chr7.3:41504497-41504516 MS.gene89818:CDS 40.0%
! CGTACTCGTCCTGATATTTT+TGG - chr7.3:41504648-41504667 MS.gene89818:CDS 40.0%
! CTCAATTTCTGCTTGTTAGC+AGG + chr7.3:41505458-41505477 None:intergenic 40.0%
! CTGTGCAGTTTCTCGAATTT+TGG + chr7.3:41504592-41504611 None:intergenic 40.0%
! GTGCTGGTAATATGCATGAT+AGG + chr7.3:41503590-41503609 None:intergenic 40.0%
! TACTTCATCCTCTTTGGTTC+TGG + chr7.3:41505248-41505267 None:intergenic 40.0%
! TGATTGGCATGATTTTGTGG+TGG - chr7.3:41504137-41504156 MS.gene89818:CDS 40.0%
!! AAAGGTTTTGATGCCTCCAA+AGG - chr7.3:41503966-41503985 MS.gene89818:CDS 40.0%
!! AAATTTCTGGCTCAGCATCA+GGG - chr7.3:41505296-41505315 MS.gene89818:CDS 40.0%
!! AAGGTTTTGATGCCTCCAAA+GGG - chr7.3:41503967-41503986 MS.gene89818:CDS 40.0%
!! AATGGTTCTAATGTCTGGAG+GGG + chr7.3:41503458-41503477 None:intergenic 40.0%
!! ACAAGAGCACTCTAGGAAAA+AGG - chr7.3:41504071-41504090 MS.gene89818:CDS 40.0%
!! ACATTGCTTGGTTTGCAGTA+CGG + chr7.3:41504779-41504798 None:intergenic 40.0%
!! TAAATTTCTGGCTCAGCATC+AGG - chr7.3:41505295-41505314 MS.gene89818:CDS 40.0%
!! TCCAATAGTTCTAGTGTGTG+AGG + chr7.3:41503425-41503444 None:intergenic 40.0%
AACTGTATACTGCTCAGCCT+CGG + chr7.3:41503758-41503777 None:intergenic 45.0%
AATGGAAATGGACGAGGAAG+AGG - chr7.3:41504290-41504309 MS.gene89818:CDS 45.0%
ACAATCCTAATCGGTGGTTC+AGG + chr7.3:41504402-41504421 None:intergenic 45.0%
ACAGATATACTGATGCGAGC+AGG + chr7.3:41505323-41505342 None:intergenic 45.0%
ACTTGTCAATCCCGTCAGAA+AGG + chr7.3:41503860-41503879 None:intergenic 45.0%
AGATGATGCTGAGGTATGGA+AGG - chr7.3:41504260-41504279 MS.gene89818:CDS 45.0%
AGATTCAAAGCTAGTCCAGG+TGG + chr7.3:41504921-41504940 None:intergenic 45.0%
AGGACCAAGATTTCGATCAG+TGG + chr7.3:41503368-41503387 None:intergenic 45.0%
AGGCTGAGCAGTATACAGTT+AGG - chr7.3:41503758-41503777 MS.gene89818:CDS 45.0%
ATAAGCATCATCCCTGATGG+TGG + chr7.3:41505146-41505165 None:intergenic 45.0%
ATATGCAGGAAGCCTGTCTT+CGG + chr7.3:41504442-41504461 None:intergenic 45.0%
ATCACCTCCTCAAGTGTCAT+TGG + chr7.3:41504210-41504229 None:intergenic 45.0%
ATGTTATGCATAGGACCACG+AGG + chr7.3:41504945-41504964 None:intergenic 45.0%
CAAAGGAACCAGAACCAAAG+AGG - chr7.3:41505237-41505256 MS.gene89818:CDS 45.0%
CAATCCTAATCGGTGGTTCA+GGG + chr7.3:41504401-41504420 None:intergenic 45.0%
CAGAAATTGAGTGGAAAGCC+AGG - chr7.3:41505467-41505486 MS.gene89818:CDS 45.0%
CGTTCCCTCTTCAACAAGTT+GGG + chr7.3:41504316-41504335 None:intergenic 45.0%
GATGGTCACAACGGTAGTAT+TGG - chr7.3:41504753-41504772 MS.gene89818:CDS 45.0%
GCACAATTTGTGGCTCGTAA+TGG - chr7.3:41503829-41503848 MS.gene89818:CDS 45.0%
GCGAAACAAGATAACGCCTA+TGG - chr7.3:41504233-41504252 MS.gene89818:CDS 45.0%
GGACCAAGATTTCGATCAGT+GGG + chr7.3:41503367-41503386 None:intergenic 45.0%
GGTAGATTCAAAGCTAGTCC+AGG + chr7.3:41504924-41504943 None:intergenic 45.0%
TAAGGAGTGAACTGAGATCC+AGG + chr7.3:41505107-41505126 None:intergenic 45.0%
TATGCATGATAGGGGTCAGA+TGG + chr7.3:41503580-41503599 None:intergenic 45.0%
TCGTTCCCTCTTCAACAAGT+TGG + chr7.3:41504317-41504336 None:intergenic 45.0%
TGACACTTGAGGAGGTGATA+AGG - chr7.3:41504211-41504230 MS.gene89818:CDS 45.0%
TGATTCTGCTCTGATCCATG+AGG - chr7.3:41505271-41505290 MS.gene89818:CDS 45.0%
TGCACATGATGCAATCTCTC+CGG - chr7.3:41505021-41505040 MS.gene89818:CDS 45.0%
TTCTGACGGGATTGACAAGT+CGG - chr7.3:41503860-41503879 MS.gene89818:CDS 45.0%
! AGAAGCCTGATATTTCTGCC+CGG - chr7.3:41503701-41503720 MS.gene89818:CDS 45.0%
! AGCATTGGAAACCTCTTCCT+CGG + chr7.3:41504679-41504698 None:intergenic 45.0%
! CCGGTGAACTGATTCCTATT+AGG - chr7.3:41504496-41504515 MS.gene89818:CDS 45.0%
! GAAACTCAGAAAGCATGTGC+TGG + chr7.3:41503606-41503625 None:intergenic 45.0%
! GGAATTGATGGATGCATTGG+GGG + chr7.3:41505050-41505069 None:intergenic 45.0%
! TTTTGGTACTACCGAGGAAG+AGG - chr7.3:41504665-41504684 MS.gene89818:CDS 45.0%
!! AGGTTTTGATGCCTCCAAAG+GGG - chr7.3:41503968-41503987 MS.gene89818:CDS 45.0%
!! AGTGTTCACAAGAGCACTCT+AGG - chr7.3:41504064-41504083 MS.gene89818:CDS 45.0%
!! ATGGTTCTAATGTCTGGAGG+GGG + chr7.3:41503457-41503476 None:intergenic 45.0%
!! CTAGCTTTGAATCTACCTCG+TGG - chr7.3:41504927-41504946 MS.gene89818:CDS 45.0%
!! CTCTTTGGTTCTGGTTCCTT+TGG + chr7.3:41505239-41505258 None:intergenic 45.0%
!! GCTTCCTGAAGGCATTACAA+GGG - chr7.3:41503780-41503799 MS.gene89818:CDS 45.0%
!!! CCCCAGCAATTTTTTCCTTC+AGG + chr7.3:41505424-41505443 None:intergenic 45.0%
ACCTCCTCCAATGACACTTG+AGG - chr7.3:41504200-41504219 MS.gene89818:CDS 50.0%
ACTGTATACTGCTCAGCCTC+GGG + chr7.3:41503757-41503776 None:intergenic 50.0%
AGCTTCTCTGTCAACCCCTT+TGG + chr7.3:41503985-41504004 None:intergenic 50.0%
ATCATGTGCATGCCTGGTCT+TGG + chr7.3:41505011-41505030 None:intergenic 50.0%
ATTTCGATCAGTGGGAGGAG+CGG + chr7.3:41503359-41503378 None:intergenic 50.0%
CCAAGATTTCGATCAGTGGG+AGG + chr7.3:41503364-41503383 None:intergenic 50.0%
CCTCCCACTGATCGAAATCT+TGG - chr7.3:41503361-41503380 MS.gene89818:CDS 50.0%
GATTGCATCATGTGCATGCC+TGG + chr7.3:41505017-41505036 None:intergenic 50.0%
GGAATCAGTTCACCGGTGAT+AGG + chr7.3:41504492-41504511 None:intergenic 50.0%
GGATGAGGGTGAGGAACATA+AGG + chr7.3:41505125-41505144 None:intergenic 50.0%
TATGCAGGAAGCCTGTCTTC+GGG + chr7.3:41504441-41504460 None:intergenic 50.0%
TCATAAACCTAGGGCTGCAC+CGG - chr7.3:41503648-41503667 MS.gene89818:CDS 50.0%
TCCTCCAATGACACTTGAGG+AGG - chr7.3:41504203-41504222 MS.gene89818:CDS 50.0%
TCCTCCCTTGTAATGCCTTC+AGG + chr7.3:41503787-41503806 None:intergenic 50.0%
TCTGACGGGATTGACAAGTC+GGG - chr7.3:41503861-41503880 MS.gene89818:CDS 50.0%
TGAAACTGTTGGCAGCCTGA+AGG - chr7.3:41505406-41505425 MS.gene89818:CDS 50.0%
TGAACTGAGATCCAGGTGGT+GGG + chr7.3:41505100-41505119 None:intergenic 50.0%
TGGAAAGCCAGGCTTTCTCA+AGG - chr7.3:41505478-41505497 MS.gene89818:CDS 50.0%
TTCAAAGCTAGTCCAGGTGG+TGG + chr7.3:41504918-41504937 None:intergenic 50.0%
TTCTCTGTCAACCCCTTTGG+AGG + chr7.3:41503982-41504001 None:intergenic 50.0%
! AAGACCCTGAACCACCGATT+AGG - chr7.3:41504394-41504413 MS.gene89818:CDS 50.0%
! ACCTCCTCAAGTGTCATTGG+AGG + chr7.3:41504207-41504226 None:intergenic 50.0%
! ACTGAAGGCATACCAGGTCT+TGG + chr7.3:41504882-41504901 None:intergenic 50.0%
! ATTGATGGATGCATTGGGGG+TGG + chr7.3:41505047-41505066 None:intergenic 50.0%
! GGAGCGGGTAAAGGAAGTAT+AGG + chr7.3:41503343-41503362 None:intergenic 50.0%
! TCCTCAAGTGTCATTGGAGG+AGG + chr7.3:41504204-41504223 None:intergenic 50.0%
! TCTGGTTCCTTTGGAAGCGA+GGG + chr7.3:41505230-41505249 None:intergenic 50.0%
!! AGAGGCCCAACTTGTTGAAG+AGG - chr7.3:41504308-41504327 MS.gene89818:CDS 50.0%
!! ATCATCCCTGATGGTGGATG+AGG + chr7.3:41505140-41505159 None:intergenic 50.0%
!! GAAAGTACTTGATCCTCCCG+AGG - chr7.3:41503738-41503757 MS.gene89818:CDS 50.0%
!! GAGGCCCAACTTGTTGAAGA+GGG - chr7.3:41504309-41504328 MS.gene89818:CDS 50.0%
!! GATAGGGGTCAGATGGATTG+AGG + chr7.3:41503573-41503592 None:intergenic 50.0%
!! GGCTTCCTGAAGGCATTACA+AGG - chr7.3:41503779-41503798 MS.gene89818:CDS 50.0%
!! TCATCCCTGATGGTGGATGA+GGG + chr7.3:41505139-41505158 None:intergenic 50.0%
!! TCCTGAAGGCATTACAAGGG+AGG - chr7.3:41503783-41503802 MS.gene89818:CDS 50.0%
!! TGGTTCTAATGTCTGGAGGG+GGG + chr7.3:41503456-41503475 None:intergenic 50.0%
!! TTCTGGTTCCTTTGGAAGCG+AGG + chr7.3:41505231-41505250 None:intergenic 50.0%
ACCACGCTCTCTCAAGGCTA+GGG + chr7.3:41505552-41505571 None:intergenic 55.0%
ACTGGAAGAGACCCGAAGAC+AGG - chr7.3:41504427-41504446 MS.gene89818:CDS 55.0%
CTCACCCTCATCCACCATCA+GGG - chr7.3:41505132-41505151 MS.gene89818:CDS 55.0%
GAACTGAGATCCAGGTGGTG+GGG + chr7.3:41505099-41505118 None:intergenic 55.0%
GGAGTGAACTGAGATCCAGG+TGG + chr7.3:41505104-41505123 None:intergenic 55.0%
GGCTGAAGAGGACGAACTGA+AGG + chr7.3:41504897-41504916 None:intergenic 55.0%
GGGAACGAGAGCTGCTAGTT+TGG - chr7.3:41504329-41504348 MS.gene89818:CDS 55.0%
GTGAACTGAGATCCAGGTGG+TGG + chr7.3:41505101-41505120 None:intergenic 55.0%
TCTACCACCACGCTCTCTCA+AGG + chr7.3:41505558-41505577 None:intergenic 55.0%
TCTTGGTCCTCTCTCCATCG+AGG - chr7.3:41503378-41503397 MS.gene89818:CDS 55.0%
TTTCGATCAGTGGGAGGAGC+GGG + chr7.3:41503358-41503377 None:intergenic 55.0%
! AACTGAGATCCAGGTGGTGG+GGG + chr7.3:41505098-41505117 None:intergenic 55.0%
! GAAGGCATACCAGGTCTTGG+AGG + chr7.3:41504879-41504898 None:intergenic 55.0%
! GGACGAACTGAAGGCATACC+AGG + chr7.3:41504888-41504907 None:intergenic 55.0%
!! ATGTGCATGCCTGGTCTTGG+TGG + chr7.3:41505008-41505027 None:intergenic 55.0%
!! TATCGGTGCTGCTTCCTCGA+TGG + chr7.3:41503395-41503414 None:intergenic 55.0%
!! TGTGCATGCCTGGTCTTGGT+GGG + chr7.3:41505007-41505026 None:intergenic 55.0%
AGCTCCTCCCTCGCTTCCAA+AGG - chr7.3:41505220-41505239 MS.gene89818:CDS 60.0%
ATGGATGCATTGGGGGTGGC+CGG + chr7.3:41505043-41505062 None:intergenic 60.0%
CACCACGCTCTCTCAAGGCT+AGG + chr7.3:41505553-41505572 None:intergenic 60.0%
CATCCACCACCTCTGCCTCA+CGG - chr7.3:41505170-41505189 MS.gene89818:CDS 60.0%
CCTCACCCTCATCCACCATC+AGG - chr7.3:41505131-41505150 MS.gene89818:CDS 60.0%
GATACTCCGTGAGGCAGAGG+TGG + chr7.3:41505179-41505198 None:intergenic 60.0%
GCTGCTTCCTCGATGGAGAG+AGG + chr7.3:41503388-41503407 None:intergenic 60.0%
GGCATACCAGGTCTTGGAGG+AGG + chr7.3:41504876-41504895 None:intergenic 60.0%
GTATACTGCTCAGCCTCGGG+AGG + chr7.3:41503754-41503773 None:intergenic 60.0%
GTGGGGGAACGGGTATTCCT+TGG + chr7.3:41505082-41505101 None:intergenic 60.0%
TCAGTGGGAGGAGCGGGTAA+AGG + chr7.3:41503352-41503371 None:intergenic 60.0%
TCAGTTTCCGGTGCAGCCCT+AGG + chr7.3:41503658-41503677 None:intergenic 60.0%
! AGTCCAGGTGGTGGCTGAAG+AGG + chr7.3:41504909-41504928 None:intergenic 60.0%
! GGTTCCTTTGGAAGCGAGGG+AGG + chr7.3:41505227-41505246 None:intergenic 60.0%
!! AGATCCAGGTGGTGGGGGAA+CGG + chr7.3:41505093-41505112 None:intergenic 60.0%
!! CCTGATGGTGGATGAGGGTG+AGG + chr7.3:41505134-41505153 None:intergenic 60.0%
!! CTAGCCTTGAGAGAGCGTGG+TGG - chr7.3:41505551-41505570 MS.gene89818:CDS 60.0%
!! GTCTTGGTGGGGGCATTGGA+AGG + chr7.3:41504995-41505014 None:intergenic 60.0%
!! GTGCATGCCTGGTCTTGGTG+GGG + chr7.3:41505006-41505025 None:intergenic 60.0%
!! TCCCTAGCCTTGAGAGAGCG+TGG - chr7.3:41505548-41505567 MS.gene89818:CDS 60.0%
!! TGCATGCCTGGTCTTGGTGG+GGG + chr7.3:41505005-41505024 None:intergenic 60.0%
ACTCCGTGAGGCAGAGGTGG+TGG + chr7.3:41505176-41505195 None:intergenic 65.0%
AGCGAGGGAGGAGCTTCCTC+AGG + chr7.3:41505215-41505234 None:intergenic 65.0%
ATACCCGTTCCCCCACCACC+TGG - chr7.3:41505086-41505105 MS.gene89818:CDS 65.0%
CCAATGCCCCCACCAAGACC+AGG - chr7.3:41504996-41505015 MS.gene89818:CDS 65.0%
CGTCCTCTTCAGCCACCACC+TGG - chr7.3:41504903-41504922 MS.gene89818:CDS 65.0%
GAGGGAGGAGCTTCCTCAGG+AGG + chr7.3:41505212-41505231 None:intergenic 65.0%
GCTGCACCTCCTCCAAGACC+TGG - chr7.3:41504867-41504886 MS.gene89818:CDS 65.0%
GGAGCTTCCTCAGGAGGTGG+CGG + chr7.3:41505206-41505225 None:intergenic 65.0%
GGAGGAGCTTCCTCAGGAGG+TGG + chr7.3:41505209-41505228 None:intergenic 65.0%
GGGGATACTCCGTGAGGCAG+AGG + chr7.3:41505182-41505201 None:intergenic 65.0%
! CTTCCTCAGGAGGTGGCGGT+GGG + chr7.3:41505202-41505221 None:intergenic 65.0%
! GAGGAGGTGCAGCAGGACCA+GGG + chr7.3:41504860-41504879 None:intergenic 65.0%
! GGTCTTGGAGGAGGTGCAGC+AGG + chr7.3:41504867-41504886 None:intergenic 65.0%
! TTCCTCAGGAGGTGGCGGTG+GGG + chr7.3:41505201-41505220 None:intergenic 65.0%
!! CCTGGTCTTGGTGGGGGCAT+TGG + chr7.3:41504999-41505018 None:intergenic 65.0%
!! GATCCAGGTGGTGGGGGAAC+GGG + chr7.3:41505092-41505111 None:intergenic 65.0%
ATCCCCACCGCCACCTCCTG+AGG - chr7.3:41505196-41505215 MS.gene89818:CDS 70.0%
GAGGTGCAGCAGGACCAGGG+AGG + chr7.3:41504857-41504876 None:intergenic 70.0%
GGCGGTGGGGATACTCCGTG+AGG + chr7.3:41505188-41505207 None:intergenic 70.0%
! GCTTCCTCAGGAGGTGGCGG+TGG + chr7.3:41505203-41505222 None:intergenic 70.0%
! GGAGGAGGTGCAGCAGGACC+AGG + chr7.3:41504861-41504880 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 41503325 41505586 41503325 ID=MS.gene89818
chr7.3 mRNA 41503325 41505586 41503325 ID=MS.gene89818.t1;Parent=MS.gene89818
chr7.3 exon 41503325 41505586 41503325 ID=MS.gene89818.t1.exon1;Parent=MS.gene89818.t1
chr7.3 CDS 41503325 41505586 41503325 ID=cds.MS.gene89818.t1;Parent=MS.gene89818.t1
Gene Sequence

>MS.gene89818

ATGCTAGGTTCATTACCTATACTTCCTTTACCCGCTCCTCCCACTGATCGAAATCTTGGTCCTCTCTCCATCGAGGAAGCAGCACCGATAACTGTTACCTCACACACTAGAACTATTGGAATAATTCACCCCCCTCCAGACATTAGAACCATTATCGATAAAGCGTCTCAGTTCGTTGCTAAAAATGGTCTTGAATTCGAAAAGAGGATTATTGCTAATTATGCGGGCAATCCCAAGTTTAATTTCCTCAATCCATCTGACCCCTATCATGCATATTACCAGCACATGCTTTCTGAGTTTCGTAGTCAGAATCAATCTTCTACTCATAAACCTAGGGCTGCACCGGAAACTGATAGTATCGATGTAGCAACTACGGAGAAGCCTGATATTTCTGCCCGGTTTAAACCAGTAAAGAAAGTACTTGATCCTCCCGAGGCTGAGCAGTATACAGTTAGGCTTCCTGAAGGCATTACAAGGGAGGAGCTAGATATAATAAAGCTTACAGCACAATTTGTGGCTCGTAATGGGAAATCCTTTCTGACGGGATTGACAAGTCGGGAGATTAATAACCCCCAATTTCATTTCATGAAACCAGCTCACAACATGTTTACATTTTTCACTTCCCTTGCTGATGCATATTCAAAGGTTTTGATGCCTCCAAAGGGGTTGACAGAGAAGCTAAAGAAGAGTGTCGACATGACTACCGTGCTTGAAAGATGTGTGAATAGGCTAGAATGGGAGTGTTCACAAGAGCACTCTAGGAAAAAGGCAGAAGATGAGATAGAGCAAGAAAGAATACAAATTGCTATGATTGATTGGCATGATTTTGTGGTGGTTGAATCAATAGACTTTGCTGATGATGAGGATGAAGAATTACCTCCTCCAATGACACTTGAGGAGGTGATAAGGCGAAACAAGATAACGCCTATGGAAGAAGATGATGCTGAGGTATGGAAGGAAGTAGAAATGGAAATGGACGAGGAAGAGGCCCAACTTGTTGAAGAGGGAACGAGAGCTGCTAGTTTGGAAGACAATGATGAAGGGAAGAAGAGTGAAGTTAGGGTTACAGAAGACCCTGAACCACCGATTAGGATTGTGAATAACTGGAAGAGACCCGAAGACAGGCTTCCTGCATATAGAGATTCAACCAAATTTGTGGTTTCTCCTATCACCGGTGAACTGATTCCTATTAGGGAAATGTCAGAACACATGCGAATTTCTCTCATTGATCCGAAGTACAAAGAACAGAAAGAAAGGATGTTTGCCAAAATTCGAGAAACTGCACAGGATGATGAAATCTCAAAAAACATTGTGGTACTTGCTCGTACTCGTCCTGATATTTTTGGTACTACCGAGGAAGAGGTTTCCAATGCTGTTAAGGCTGAAATTGAGAAGAAAAATGATGAGCAGCCTAAGCAGATTATATGGGATGGTCACAACGGTAGTATTGGCCGTACTGCAAACCAAGCAATGTCACAAAATATTGGAAGTGAGGATCAAAATGATGCTTATAATAATGAATCTAAAAACCTCCCTGGTCCTGCTGCACCTCCTCCAAGACCTGGTATGCCTTCAGTTCGTCCTCTTCAGCCACCACCTGGACTAGCTTTGAATCTACCTCGTGGTCCTATGCATAACATGCAGAATTCTAATCCTAATAGCATTGGCCTTCCAATGCCCCCACCAAGACCAGGCATGCACATGATGCAATCTCTCCGGCCACCCCCAATGCATCCATCAATTCCTATGAATAACCAAGGAATACCCGTTCCCCCACCACCTGGATCTCAGTTCACTCCTTATGTTCCTCACCCTCATCCACCATCAGGGATGATGCTTATGATGCATCCACCACCTCTGCCTCACGGAGTATCCCCACCGCCACCTCCTGAGGAAGCTCCTCCCTCGCTTCCAAAGGAACCAGAACCAAAGAGGATGAAGTATGATGATTCTGCTCTGATCCATGAGGATAAATTTCTGGCTCAGCATCAGGGACCTGCTCGCATCAGTATATCTGTTCCTAATGTTGATGAAGGAAATCTCAAAGGACAAGTTCTGGAAATAACTGTGCAATCTCTGTCTGAAACTGTTGGCAGCCTGAAGGAAAAAATTGCTGGGGAGATTCAACTCCCTGCTAACAAGCAGAAATTGAGTGGAAAGCCAGGCTTTCTCAAGGACAATATGTCACTTGCACATTACAATGTTAGTGGAGGAGAAACTCTCTCCCTAGCCTTGAGAGAGCGTGGTGGTAGAAAGAGATGA
Protein sequence

>MS.gene89818.t1

MLGSLPILPLPAPPTDRNLGPLSIEEAAPITVTSHTRTIGIIHPPPDIRTIIDKASQFVAKNGLEFEKRIIANYAGNPKFNFLNPSDPYHAYYQHMLSEFRSQNQSSTHKPRAAPETDSIDVATTEKPDISARFKPVKKVLDPPEAEQYTVRLPEGITREELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFMKPAHNMFTFFTSLADAYSKVLMPPKGLTEKLKKSVDMTTVLERCVNRLEWECSQEHSRKKAEDEIEQERIQIAMIDWHDFVVVESIDFADDEDEELPPPMTLEEVIRRNKITPMEEDDAEVWKEVEMEMDEEEAQLVEEGTRAASLEDNDEGKKSEVRVTEDPEPPIRIVNNWKRPEDRLPAYRDSTKFVVSPITGELIPIREMSEHMRISLIDPKYKEQKERMFAKIRETAQDDEISKNIVVLARTRPDIFGTTEEEVSNAVKAEIEKKNDEQPKQIIWDGHNGSIGRTANQAMSQNIGSEDQNDAYNNESKNLPGPAAPPPRPGMPSVRPLQPPPGLALNLPRGPMHNMQNSNPNSIGLPMPPPRPGMHMMQSLRPPPMHPSIPMNNQGIPVPPPPGSQFTPYVPHPHPPSGMMLMMHPPPLPHGVSPPPPPEEAPPSLPKEPEPKRMKYDDSALIHEDKFLAQHQGPARISISVPNVDEGNLKGQVLEITVQSLSETVGSLKEKIAGEIQLPANKQKLSGKPGFLKDNMSLAHYNVSGGETLSLALRERGGRKR