Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89820.t1 | GAU12858.1 | 82.6 | 806 | 83 | 9 | 1 | 751 | 5 | 808 | 0.00E+00 | 1115.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89820.t1 | Q8RXF1 | 61.9 | 805 | 229 | 13 | 1 | 751 | 5 | 785 | 5.8e-223 | 775.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89820.t1 | A0A2Z6LKS9 | 82.6 | 806 | 83 | 9 | 1 | 751 | 5 | 808 | 0.0e+00 | 1115.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene89820 | MS.gene03206 | PPI |
| MS.gene73791 | MS.gene89820 | PPI |
| MS.gene022734 | MS.gene89820 | PPI |
| MS.gene39316 | MS.gene89820 | PPI |
| MS.gene73790 | MS.gene89820 | PPI |
| MS.gene46269 | MS.gene89820 | PPI |
| MS.gene013607 | MS.gene89820 | PPI |
| MS.gene013796 | MS.gene89820 | PPI |
| MS.gene46271 | MS.gene89820 | PPI |
| MS.gene003478 | MS.gene89820 | PPI |
| MS.gene89820 | MS.gene013791 | PPI |
| MS.gene06729 | MS.gene89820 | PPI |
| MS.gene020229 | MS.gene89820 | PPI |
| MS.gene06946 | MS.gene89820 | PPI |
| MS.gene89820 | MS.gene52116 | PPI |
| MS.gene057666 | MS.gene89820 | PPI |
| MS.gene02577 | MS.gene89820 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89820.t1 | MTR_8g106170 | 85.354 | 792 | 62 | 7 | 11 | 751 | 16 | 804 | 0.0 | 1150 |
| MS.gene89820.t1 | MTR_7g063860 | 82.080 | 452 | 50 | 3 | 306 | 751 | 1 | 427 | 0.0 | 534 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89820.t1 | AT1G14650 | 63.009 | 811 | 210 | 18 | 1 | 751 | 5 | 785 | 0.0 | 838 |
| MS.gene89820.t1 | AT1G14650 | 63.009 | 811 | 210 | 18 | 1 | 751 | 5 | 785 | 0.0 | 838 |
| MS.gene89820.t1 | AT1G14650 | 63.009 | 811 | 210 | 18 | 1 | 751 | 5 | 785 | 0.0 | 838 |
| MS.gene89820.t1 | AT1G14640 | 57.979 | 752 | 257 | 17 | 1 | 714 | 5 | 735 | 0.0 | 697 |
| MS.gene89820.t1 | AT1G14640 | 57.979 | 752 | 257 | 17 | 1 | 714 | 5 | 735 | 0.0 | 697 |
| MS.gene89820.t1 | AT4G16200 | 34.211 | 266 | 109 | 7 | 33 | 232 | 10 | 275 | 1.45e-31 | 125 |
| MS.gene89820.t1 | AT5G12280 | 48.966 | 145 | 53 | 3 | 598 | 742 | 294 | 417 | 2.01e-30 | 125 |
| MS.gene89820.t1 | AT5G12280 | 27.273 | 253 | 134 | 8 | 40 | 289 | 89 | 294 | 5.69e-12 | 68.9 |
| MS.gene89820.t1 | AT5G06520 | 32.937 | 252 | 120 | 9 | 34 | 281 | 391 | 597 | 5.02e-29 | 124 |
| MS.gene89820.t1 | AT5G06520 | 32.353 | 170 | 92 | 5 | 149 | 316 | 79 | 227 | 4.52e-13 | 73.2 |
| MS.gene89820.t1 | AT5G06890 | 54.667 | 75 | 22 | 3 | 669 | 742 | 2 | 65 | 6.48e-15 | 70.5 |
| MS.gene89820.t1 | AT2G43960 | 27.413 | 259 | 152 | 9 | 40 | 288 | 9 | 241 | 2.73e-13 | 73.2 |
| MS.gene89820.t1 | AT3G49130 | 33.333 | 183 | 94 | 8 | 136 | 308 | 39 | 203 | 3.85e-12 | 68.6 |
Find 231 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTCGGTTCGTTGCTAAAA+TGG | 0.138050 | 7.3:-41495752 | MS.gene89820:CDS |
| TGTTCTGACATTTCACTATT+AGG | 0.211420 | 7.3:+41494731 | None:intergenic |
| CAGAGTGGTTTCTCGTATTT+TGG | 0.223336 | 7.3:+41494652 | None:intergenic |
| TACTTCATCCTCTTTGGTTC+TGG | 0.241819 | 7.3:+41493990 | None:intergenic |
| GATCCCTGAGGATAAATTTC+TGG | 0.243440 | 7.3:-41493952 | MS.gene89820:CDS |
| ACTTGTCAATTCTGTCAAAA+AGG | 0.246516 | 7.3:+41495384 | None:intergenic |
| AGATTTCCTTCATCAAAATT+AGG | 0.258736 | 7.3:+41493891 | None:intergenic |
| CTCTTTGGTTCTGGTTCCTC+TGG | 0.261880 | 7.3:+41493999 | None:intergenic |
| AGCAACCTAAGCAGGTTATA+TGG | 0.279454 | 7.3:-41494505 | MS.gene89820:CDS |
| GATAGGAGAAACCACAAATT+TGG | 0.286635 | 7.3:+41494769 | None:intergenic |
| GGGAACGAGAGCTGCTAGTT+TGG | 0.298170 | 7.3:-41494912 | MS.gene89820:CDS |
| GGATCAAGTACTTTCTTTAC+TGG | 0.315349 | 7.3:+41495511 | None:intergenic |
| CTCAATTTCTGCTTGTTAGC+AGG | 0.319229 | 7.3:+41493780 | None:intergenic |
| GGCATTCCTTGGTTATTCAT+AGG | 0.329052 | 7.3:+41494167 | None:intergenic |
| ATTGGAAGGCCAATACTATT+AGG | 0.329277 | 7.3:+41494257 | None:intergenic |
| TCTTTCTGTTCTTTGTACTT+AGG | 0.329702 | 7.3:+41494686 | None:intergenic |
| GCTTCCTCAGGAGGCGGCGG+TGG | 0.330227 | 7.3:+41494035 | None:intergenic |
| GACACTCTTCTTTAGCTTCT+CGG | 0.330459 | 7.3:+41495246 | None:intergenic |
| TCGTCATACTTCATCCTCTT+TGG | 0.331389 | 7.3:+41493984 | None:intergenic |
| AAGGGAAGAAGAGTGAAGTC+AGG | 0.334414 | 7.3:-41494877 | MS.gene89820:CDS |
| TCCTCCCTTGCAATGCCTTC+AGG | 0.342483 | 7.3:+41495457 | None:intergenic |
| CAAGCAATGTCACAAAATAT+TGG | 0.348373 | 7.3:-41494446 | MS.gene89820:CDS |
| TGGTTATTCATAGGAATTGA+TGG | 0.349393 | 7.3:+41494176 | None:intergenic |
| ACATCGATACTATCAGTTTC+CGG | 0.350605 | 7.3:+41495574 | None:intergenic |
| CCTCCCACTGATGGAAATCT+TGG | 0.352504 | 7.3:-41495880 | MS.gene89820:CDS |
| CGATTAGGATTGTGAATAAC+TGG | 0.353048 | 7.3:-41494832 | MS.gene89820:CDS |
| TTAAACCGGGCAGAAATATC+AGG | 0.353449 | 7.3:+41495535 | None:intergenic |
| CACAATTTGTGGCTCGTAAT+GGG | 0.363738 | 7.3:-41495411 | MS.gene89820:CDS |
| CTTTCTTTACTGGTTTAAAC+CGG | 0.371124 | 7.3:+41495521 | None:intergenic |
| AGCTTCTCGGTCAACCCCTT+TGG | 0.375163 | 7.3:+41495259 | None:intergenic |
| ACAATCCTAATCGGTGGTTC+AGG | 0.375962 | 7.3:+41494842 | None:intergenic |
| CTTCCTCAGGAGGCGGCGGT+GGG | 0.381326 | 7.3:+41494036 | None:intergenic |
| AAATCTCAAAGGACAAGTTC+TGG | 0.387127 | 7.3:-41493874 | MS.gene89820:CDS |
| GAAGGAAGTAGAAATGGATA+TGG | 0.387273 | 7.3:-41494963 | MS.gene89820:CDS |
| GCCACACACACTAGAACTAT+TGG | 0.387802 | 7.3:-41495820 | MS.gene89820:CDS |
| GTGCTGGTAATATGCATGAT+AGG | 0.389377 | 7.3:+41495654 | None:intergenic |
| TATGCAGGAAGCCTGTCTTC+TGG | 0.393917 | 7.3:+41494803 | None:intergenic |
| CAGTTATTCACAATCCTAAT+CGG | 0.396142 | 7.3:+41494833 | None:intergenic |
| CGTTCCCTCTTCAACAAGTT+GGG | 0.404253 | 7.3:+41494928 | None:intergenic |
| ACTCCTTGAGGTGGAGGTGG+TGG | 0.405349 | 7.3:+41494062 | None:intergenic |
| TAAATTTCTGGATCAGCATC+AGG | 0.405570 | 7.3:-41493940 | MS.gene89820:CDS |
| AGAGGTTTCCAATGCTGTTA+AGG | 0.406420 | 7.3:-41494552 | MS.gene89820:CDS |
| CTCCCACTGATGGAAATCTT+GGG | 0.407306 | 7.3:-41495879 | MS.gene89820:CDS |
| TGTGCATGCCTGGTCTTGGT+GGG | 0.408145 | 7.3:+41494231 | None:intergenic |
| GGTAGGGAAGGAAGTAGAAA+TGG | 0.408708 | 7.3:-41494969 | MS.gene89820:CDS |
| ACTAGAGCAAGCTAGGAAAA+TGG | 0.413948 | 7.3:-41495170 | MS.gene89820:CDS |
| CGTCCTCTTCCGCCACCAAC+TGG | 0.418670 | 7.3:-41494332 | MS.gene89820:CDS |
| GTGGAGGAATGGGCATTCCT+TGG | 0.419123 | 7.3:+41494156 | None:intergenic |
| TAGAGATTCAACCAAATTTG+TGG | 0.421417 | 7.3:-41494780 | MS.gene89820:CDS |
| GGAGGAGGTGCAGCAGGACC+AGG | 0.431521 | 7.3:+41494377 | None:intergenic |
| CCTCACCCTCATCCACCATC+AGG | 0.435685 | 7.3:-41494104 | MS.gene89820:CDS |
| AAAGCTTACAGCACAATTTG+TGG | 0.438501 | 7.3:-41495422 | MS.gene89820:CDS |
| TAGGAATTGATGGATGCATT+GGG | 0.444523 | 7.3:+41494186 | None:intergenic |
| TACAAATGGCTATGGTTGAT+TGG | 0.445085 | 7.3:-41495120 | MS.gene89820:CDS |
| ATCACCTCCTCAAGTGTCAT+TGG | 0.449631 | 7.3:+41495034 | None:intergenic |
| AAGACCCTGAACCACCGATT+AGG | 0.451674 | 7.3:-41494847 | MS.gene89820:CDS |
| GCAACCTAAGCAGGTTATAT+GGG | 0.454626 | 7.3:-41494504 | MS.gene89820:CDS |
| AATTTCAGCCTTAACAGCAT+TGG | 0.456041 | 7.3:+41494544 | None:intergenic |
| GATACTCCTTGAGGTGGAGG+TGG | 0.456648 | 7.3:+41494059 | None:intergenic |
| TGCATGCCTGGTCTTGGTGG+GGG | 0.457278 | 7.3:+41494233 | None:intergenic |
| GAAGAAGATGATGCTGAGGT+AGG | 0.457553 | 7.3:-41494986 | MS.gene89820:CDS |
| GGATGAGGGTGAGGAACATA+AGG | 0.458423 | 7.3:+41494113 | None:intergenic |
| GCACAATTTGTGGCTCGTAA+TGG | 0.460668 | 7.3:-41495412 | MS.gene89820:CDS |
| ATGTGCATGCCTGGTCTTGG+TGG | 0.461170 | 7.3:+41494230 | None:intergenic |
| AGTCCAGTTGGTGGCGGAAG+AGG | 0.462185 | 7.3:+41494329 | None:intergenic |
| GGAATCAGTTCACCGGTGAT+AGG | 0.466222 | 7.3:+41494752 | None:intergenic |
| GATCCAGGTGGTGGAGGAAT+GGG | 0.466476 | 7.3:+41494146 | None:intergenic |
| TTCTCGGTCAACCCCTTTGG+AGG | 0.468813 | 7.3:+41495262 | None:intergenic |
| AGATCCAGGTGGTGGAGGAA+TGG | 0.470134 | 7.3:+41494145 | None:intergenic |
| GGTCTTGGAGGAGGTGCAGC+AGG | 0.470671 | 7.3:+41494371 | None:intergenic |
| TCGTTCCCTCTTCAACAAGT+TGG | 0.470849 | 7.3:+41494927 | None:intergenic |
| GTTTCATGAAATGAAATTGA+GGG | 0.470923 | 7.3:+41495347 | None:intergenic |
| TGGATTGAGGAAATTAAACT+TGG | 0.471770 | 7.3:+41495684 | None:intergenic |
| TCAATTTCTGCTTGTTAGCA+GGG | 0.474049 | 7.3:+41493781 | None:intergenic |
| TCTCGGTTCGTTGCTAAAAT+GGG | 0.475519 | 7.3:-41495751 | MS.gene89820:CDS |
| GTCATGTGCATGCCTGGTCT+TGG | 0.475861 | 7.3:+41494227 | None:intergenic |
| TCAGTTTCCGGTGCAGCCCT+AGG | 0.479497 | 7.3:+41495586 | None:intergenic |
| TTCTGGTTCCTCTGGAAACA+AGG | 0.479917 | 7.3:+41494007 | None:intergenic |
| AACTGTATACTGCTCAGCCT+CGG | 0.479959 | 7.3:+41495486 | None:intergenic |
| CCATCCCATATAACCTGCTT+AGG | 0.482921 | 7.3:+41494500 | None:intergenic |
| AGAGCAAGAAAGAATACAAA+TGG | 0.484421 | 7.3:-41495134 | MS.gene89820:CDS |
| AATGTAAACATGTTGTGAGT+TGG | 0.484691 | 7.3:+41495325 | None:intergenic |
| GGAGCTTCCTCAGGAGGCGG+CGG | 0.486510 | 7.3:+41494032 | None:intergenic |
| AGGATTATTGCTAATTATGC+GGG | 0.488493 | 7.3:-41495712 | MS.gene89820:CDS |
| TTGGTTGAATCTCTATATGC+AGG | 0.488704 | 7.3:+41494788 | None:intergenic |
| GGGGATACTCCTTGAGGTGG+AGG | 0.491423 | 7.3:+41494056 | None:intergenic |
| AGATGATGCTGAGGTAGGGA+AGG | 0.492151 | 7.3:-41494981 | MS.gene89820:CDS |
| TCAGTGGGAGGAGCGGGTAG+AGG | 0.492761 | 7.3:+41495892 | None:intergenic |
| AACTGAGATCCAGGTGGTGG+AGG | 0.493314 | 7.3:+41494140 | None:intergenic |
| TGCACATGACGCAATCTCTC+CGG | 0.493421 | 7.3:-41494214 | MS.gene89820:CDS |
| TGATCCAGAAATTTATCCTC+AGG | 0.493754 | 7.3:+41493948 | None:intergenic |
| AAATGATGAGCAACCTAAGC+AGG | 0.494557 | 7.3:-41494513 | MS.gene89820:CDS |
| CCTTGCTGATGCATATTCAA+AGG | 0.496930 | 7.3:-41495293 | MS.gene89820:CDS |
| AATGGATATGGACGAGGAAG+AGG | 0.498367 | 7.3:-41494951 | MS.gene89820:CDS |
| TTTCCATCAGTGGGAGGAGC+GGG | 0.498622 | 7.3:+41495886 | None:intergenic |
| ACTGTATACTGCTCAGCCTC+GGG | 0.500711 | 7.3:+41495487 | None:intergenic |
| ATAGGAATTGATGGATGCAT+TGG | 0.501574 | 7.3:+41494185 | None:intergenic |
| CAATCCTAATCGGTGGTTCA+GGG | 0.505409 | 7.3:+41494843 | None:intergenic |
| TGACACTTGAGGAGGTGATA+AGG | 0.505752 | 7.3:-41495030 | MS.gene89820:CDS |
| AATCTTCTACTCATAAACCT+AGG | 0.508510 | 7.3:-41495603 | MS.gene89820:CDS |
| ATATTGTCCTTGAGAAAGCC+TGG | 0.508540 | 7.3:+41493750 | None:intergenic |
| AAGAAGATGATGCTGAGGTA+GGG | 0.508977 | 7.3:-41494985 | MS.gene89820:CDS |
| GGTTTCATGAAATGAAATTG+AGG | 0.509503 | 7.3:+41495346 | None:intergenic |
| TGGGTCTTGAATTTGAAAAG+AGG | 0.510533 | 7.3:-41495732 | MS.gene89820:CDS |
| CTACCCGCTCCTCCCACTGA+TGG | 0.510889 | 7.3:-41495889 | MS.gene89820:CDS |
| AGTACAAAGAACAGAAAGAA+AGG | 0.511535 | 7.3:-41494682 | MS.gene89820:CDS |
| AACAAGGGAGGAGCTTCCTC+AGG | 0.512702 | 7.3:+41494023 | None:intergenic |
| GATTGCGTCATGTGCATGCC+TGG | 0.513367 | 7.3:+41494221 | None:intergenic |
| TTCCTCAGGAGGCGGCGGTG+GGG | 0.516253 | 7.3:+41494037 | None:intergenic |
| TATTCTAATCCTAATAGTAT+TGG | 0.516440 | 7.3:-41494266 | MS.gene89820:CDS |
| TGATGGAAATCTTGGGGAGG+AGG | 0.519562 | 7.3:-41495872 | MS.gene89820:CDS |
| CAGAAATTGAGTGGAAAGCC+AGG | 0.519574 | 7.3:-41493768 | MS.gene89820:CDS |
| GGAGGAGCTTCCTCAGGAGG+CGG | 0.521643 | 7.3:+41494029 | None:intergenic |
| TCATAAACCTAGGGCTGCAC+CGG | 0.523333 | 7.3:-41495593 | MS.gene89820:CDS |
| TAAGGAGTGAACTGAGATCC+AGG | 0.526111 | 7.3:+41494131 | None:intergenic |
| ATGCCCATTCCTCCACCACC+TGG | 0.528755 | 7.3:-41494149 | MS.gene89820:CDS |
| AGAAAGAATACAAATGGCTA+TGG | 0.530036 | 7.3:-41495128 | MS.gene89820:CDS |
| TGCTGGTAATATGCATGATA+GGG | 0.530338 | 7.3:+41495655 | None:intergenic |
| TCCTCAAGTGTCATTGGAGG+AGG | 0.532277 | 7.3:+41495040 | None:intergenic |
| GTGCATGCCTGGTCTTGGTG+GGG | 0.532518 | 7.3:+41494232 | None:intergenic |
| TTTGACAGAATTGACAAGTA+GGG | 0.533631 | 7.3:-41495380 | MS.gene89820:CDS |
| ATCATCCCTGATGGTGGATG+AGG | 0.533964 | 7.3:+41494098 | None:intergenic |
| GAAGTCATACCAGGTCTTGG+AGG | 0.534350 | 7.3:+41494359 | None:intergenic |
| ACTGAAGTCATACCAGGTCT+TGG | 0.536230 | 7.3:+41494356 | None:intergenic |
| GGCTTCCTGAAGGCATTGCA+AGG | 0.537933 | 7.3:-41495462 | MS.gene89820:CDS |
| GCGAAACAAGATAACGCCTA+TGG | 0.538384 | 7.3:-41495008 | MS.gene89820:CDS |
| TATGCATGATAGGGGTCAGA+TGG | 0.541297 | 7.3:+41495664 | None:intergenic |
| GAGGAGGTGCAGCAGGACCA+GGG | 0.541548 | 7.3:+41494378 | None:intergenic |
| TCCTGAAGGCATTGCAAGGG+AGG | 0.541569 | 7.3:-41495458 | MS.gene89820:CDS |
| TGCTTGAACGATGTGTGAAT+AGG | 0.543934 | 7.3:-41495210 | MS.gene89820:CDS |
| TTTGTGGTTTCTCCTATCAC+CGG | 0.544417 | 7.3:-41494764 | MS.gene89820:CDS |
| AGGGAAGAAGAGTGAAGTCA+GGG | 0.544952 | 7.3:-41494876 | MS.gene89820:CDS |
| AGGCTGAGCAGTATACAGTT+AGG | 0.547036 | 7.3:-41495483 | MS.gene89820:CDS |
| ACGAGAAACCACTCTGGCAC+AGG | 0.548179 | 7.3:-41494645 | MS.gene89820:CDS |
| CACCACGCTCTCTCAAGGCT+AGG | 0.548324 | 7.3:+41493685 | None:intergenic |
| TCCCCAAGATTTCCATCAGT+GGG | 0.549023 | 7.3:+41495877 | None:intergenic |
| AGTTTGGAAGACAATGATGA+AGG | 0.550080 | 7.3:-41494896 | MS.gene89820:CDS |
| GGAGCGGGTAGAGGAAGTAT+AGG | 0.550091 | 7.3:+41495901 | None:intergenic |
| CAATCTTTGTCTGAAACTGT+TGG | 0.550457 | 7.3:-41493840 | MS.gene89820:CDS |
| GTGAACTGAGATCCAGGTGG+TGG | 0.552277 | 7.3:+41494137 | None:intergenic |
| GATGTGTGAATAGGCTGGAA+TGG | 0.552383 | 7.3:-41495201 | MS.gene89820:CDS |
| ACCTCCTCAAGTGTCATTGG+AGG | 0.553642 | 7.3:+41495037 | None:intergenic |
| GATGGTCACAGCGGTAGTAT+TGG | 0.553821 | 7.3:-41494482 | MS.gene89820:CDS |
| GAATACTGCATGTTATGTAA+AGG | 0.556618 | 7.3:+41494284 | None:intergenic |
| GTCACAAAATATTGGAAGTG+AGG | 0.557834 | 7.3:-41494438 | MS.gene89820:CDS |
| TCAGCATCATCTTCTTCCAT+AGG | 0.558125 | 7.3:+41494992 | None:intergenic |
| TCCAATAGTTCTAGTGTGTG+TGG | 0.560378 | 7.3:+41495819 | None:intergenic |
| GTCATACCAGGTCTTGGAGG+AGG | 0.561127 | 7.3:+41494362 | None:intergenic |
| ACATATATACTGATGCGAGC+AGG | 0.561433 | 7.3:+41493915 | None:intergenic |
| GTGTGTGTGGCAACAGTTGT+CGG | 0.561561 | 7.3:+41495832 | None:intergenic |
| AGCTCCTCCCTTGTTTCCAG+AGG | 0.565510 | 7.3:-41494015 | MS.gene89820:CDS |
| AGCAGGGAGTTGAATCTCCC+CGG | 0.565840 | 7.3:+41493797 | None:intergenic |
| TGAACGATGTGTGAATAGGC+TGG | 0.566222 | 7.3:-41495206 | MS.gene89820:CDS |
| AGTAGAAATGGATATGGACG+AGG | 0.566282 | 7.3:-41494957 | MS.gene89820:CDS |
| ATCCCCACCGCCGCCTCCTG+AGG | 0.567346 | 7.3:-41494039 | MS.gene89820:CDS |
| TCTACCACCACGCTCTCTCA+AGG | 0.569307 | 7.3:+41493680 | None:intergenic |
| ATCTTCTACTCATAAACCTA+GGG | 0.571317 | 7.3:-41495602 | MS.gene89820:CDS |
| GATAGGGGTCAGATGGATTG+AGG | 0.573806 | 7.3:+41495671 | None:intergenic |
| GAGGATTATTGCTAATTATG+CGG | 0.574782 | 7.3:-41495713 | MS.gene89820:CDS |
| ATGTGTGAATAGGCTGGAAT+GGG | 0.578972 | 7.3:-41495200 | MS.gene89820:CDS |
| ACTATTAGGAATCAGTTCAC+CGG | 0.579775 | 7.3:+41494745 | None:intergenic |
| CTCCCCAAGATTTCCATCAG+TGG | 0.579945 | 7.3:+41495876 | None:intergenic |
| AGAGGCCCAACTTGTTGAAG+AGG | 0.583627 | 7.3:-41494933 | MS.gene89820:CDS |
| TTCAAAGCTAGTCCAGTTGG+TGG | 0.583859 | 7.3:+41494320 | None:intergenic |
| TTTGATGAAGGAAATCTCAA+AGG | 0.585080 | 7.3:-41493885 | MS.gene89820:CDS |
| AGCGTTCACTAGAGCAAGCT+AGG | 0.585114 | 7.3:-41495177 | MS.gene89820:CDS |
| GTTTGGAAGACAATGATGAA+GGG | 0.585538 | 7.3:-41494895 | MS.gene89820:CDS |
| CCTGATGGTGGATGAGGGTG+AGG | 0.585720 | 7.3:+41494104 | None:intergenic |
| TAGTATCGATGTAGCAACTA+CGG | 0.586896 | 7.3:-41495563 | MS.gene89820:CDS |
| TCCCACTGATGGAAATCTTG+GGG | 0.587594 | 7.3:-41495878 | MS.gene89820:CDS |
| AAAGCTAGTCCAGTTGGTGG+CGG | 0.588084 | 7.3:+41494323 | None:intergenic |
| GAAACTCAGAAAGCATGTGC+TGG | 0.588759 | 7.3:+41495638 | None:intergenic |
| GGACGAACTGAAGTCATACC+AGG | 0.589321 | 7.3:+41494350 | None:intergenic |
| GGATTGAGGAAATTAAACTT+GGG | 0.589490 | 7.3:+41495685 | None:intergenic |
| GCTGCACCTCCTCCAAGACC+TGG | 0.589894 | 7.3:-41494368 | MS.gene89820:CDS |
| CCTAAGCAGGTTATATGGGA+TGG | 0.590606 | 7.3:-41494500 | MS.gene89820:CDS |
| AGCATTGGAAACCTCTTCCT+CGG | 0.590624 | 7.3:+41494559 | None:intergenic |
| AGATTCAAAGCTAGTCCAGT+TGG | 0.591700 | 7.3:+41494317 | None:intergenic |
| ACCACGCTCTCTCAAGGCTA+GGG | 0.592917 | 7.3:+41493686 | None:intergenic |
| TCCCTAGCCTTGAGAGAGCG+TGG | 0.597079 | 7.3:-41493687 | MS.gene89820:CDS |
| ACTGGAAGAGACCAGAAGAC+AGG | 0.604101 | 7.3:-41494814 | MS.gene89820:CDS |
| TGAAACTGTTGGCAGCCTGA+AGG | 0.606065 | 7.3:-41493829 | MS.gene89820:CDS |
| CTCACCCTCATCCACCATCA+GGG | 0.607170 | 7.3:-41494103 | MS.gene89820:CDS |
| AAGGGAGGAGCTTCCTCAGG+AGG | 0.607480 | 7.3:+41494026 | None:intergenic |
| CCATTATTGATAAAACCTCT+CGG | 0.610866 | 7.3:-41495768 | MS.gene89820:CDS |
| TGGAAAGCCAGGCTTTCTCA+AGG | 0.611679 | 7.3:-41493757 | MS.gene89820:CDS |
| GGCGGTGGGGATACTCCTTG+AGG | 0.612815 | 7.3:+41494050 | None:intergenic |
| ATAAGCATCATCCCTGATGG+TGG | 0.613914 | 7.3:+41494092 | None:intergenic |
| TCTTGGGGAGGAGGTGATCG+AGG | 0.614190 | 7.3:-41495863 | MS.gene89820:CDS |
| ATTTCCATCAGTGGGAGGAG+CGG | 0.614809 | 7.3:+41495885 | None:intergenic |
| ATCATAAGCATCATCCCTGA+TGG | 0.614902 | 7.3:+41494089 | None:intergenic |
| GAGGCCCAACTTGTTGAAGA+GGG | 0.616284 | 7.3:-41494932 | MS.gene89820:CDS |
| CACTGATGGAAATCTTGGGG+AGG | 0.616691 | 7.3:-41495875 | MS.gene89820:CDS |
| GGAATTGATGGATGCATTGG+GGG | 0.617363 | 7.3:+41494188 | None:intergenic |
| CATCCACCACCTCCACCTCA+AGG | 0.617512 | 7.3:-41494065 | MS.gene89820:CDS |
| GCTAACAAGCAGAAATTGAG+TGG | 0.618988 | 7.3:-41493777 | MS.gene89820:CDS |
| GCTTCCTGAAGGCATTGCAA+GGG | 0.619079 | 7.3:-41495461 | MS.gene89820:CDS |
| TTCATCATCCTGTGCCAGAG+TGG | 0.619478 | 7.3:+41494637 | None:intergenic |
| TCTGGTTCCTCTGGAAACAA+GGG | 0.620399 | 7.3:+41494008 | None:intergenic |
| AGAAGCCTGATATTTCTGCC+CGG | 0.622543 | 7.3:-41495540 | MS.gene89820:CDS |
| TCAATTCCTATGAATAACCA+AGG | 0.629776 | 7.3:-41494173 | MS.gene89820:CDS |
| TTTCTTTACTGGTTTAAACC+GGG | 0.630709 | 7.3:+41495522 | None:intergenic |
| AGGAATTGATGGATGCATTG+GGG | 0.631433 | 7.3:+41494187 | None:intergenic |
| GATCCAGAAATTTATCCTCA+GGG | 0.634230 | 7.3:+41493949 | None:intergenic |
| CCTTTGAATATGCATCAGCA+AGG | 0.634998 | 7.3:+41495293 | None:intergenic |
| CTTTGAATATGCATCAGCAA+GGG | 0.636298 | 7.3:+41495294 | None:intergenic |
| ACCTCCTCCAATGACACTTG+AGG | 0.642711 | 7.3:-41495041 | MS.gene89820:CDS |
| CAGAGGAACCAGAACCAAAG+AGG | 0.642866 | 7.3:-41493998 | MS.gene89820:CDS |
| GTATACTGCTCAGCCTCGGG+AGG | 0.644159 | 7.3:+41495490 | None:intergenic |
| TTATTCACAATCCTAATCGG+TGG | 0.645627 | 7.3:+41494836 | None:intergenic |
| CTTGCACATTACAATGTCAG+TGG | 0.646215 | 7.3:-41493723 | MS.gene89820:CDS |
| AATAGACTTTGCTGATGATG+AGG | 0.647412 | 7.3:-41495074 | MS.gene89820:CDS |
| GGTTCCTCTGGAAACAAGGG+AGG | 0.650047 | 7.3:+41494011 | None:intergenic |
| TCCTCCAATGACACTTGAGG+AGG | 0.650135 | 7.3:-41495038 | MS.gene89820:CDS |
| GGTGGGGATACTCCTTGAGG+TGG | 0.652903 | 7.3:+41494053 | None:intergenic |
| AAATTTCTGGATCAGCATCA+GGG | 0.656993 | 7.3:-41493939 | MS.gene89820:CDS |
| TCATCCCTGATGGTGGATGA+GGG | 0.667117 | 7.3:+41494099 | None:intergenic |
| CGATTCTGCTCTGATCCCTG+AGG | 0.667531 | 7.3:-41493964 | MS.gene89820:CDS |
| CAAAATACGAGAAACCACTC+TGG | 0.669456 | 7.3:-41494651 | MS.gene89820:CDS |
| CCAAGATTTCCATCAGTGGG+AGG | 0.670695 | 7.3:+41495880 | None:intergenic |
| GCACATTACAATGTCAGTGG+AGG | 0.674142 | 7.3:-41493720 | MS.gene89820:CDS |
| TATACAGTTAGGCTTCCTGA+AGG | 0.674309 | 7.3:-41495472 | MS.gene89820:CDS |
| TATGGAAGAAGATGATGCTG+AGG | 0.681247 | 7.3:-41494990 | MS.gene89820:CDS |
| GAAAGTACTTGATCCTCCCG+AGG | 0.684311 | 7.3:-41495503 | MS.gene89820:CDS |
| GAGGTGCAGCAGGACCAGGG+AGG | 0.710329 | 7.3:+41494381 | None:intergenic |
| GCTGGTAATATGCATGATAG+GGG | 0.722069 | 7.3:+41495656 | None:intergenic |
| CTAGCCTTGAGAGAGCGTGG+TGG | 0.725849 | 7.3:-41493684 | MS.gene89820:CDS |
| CTAGCTTTGAATCTACCTCG+TGG | 0.727501 | 7.3:-41494308 | MS.gene89820:CDS |
| GTTATATGGGATGGTCACAG+CGG | 0.750758 | 7.3:-41494491 | MS.gene89820:CDS |
| ATGTTATGTAAAGGACCACG+AGG | 0.782735 | 7.3:+41494293 | None:intergenic |
| GGAGTGAACTGAGATCCAGG+TGG | 0.832532 | 7.3:+41494134 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTCTAATCCTAATAGTAT+TGG | - | chr7.3:41495309-41495328 | MS.gene89820:CDS | 20.0% |
| ! | AGATTTCCTTCATCAAAATT+AGG | + | chr7.3:41495687-41495706 | None:intergenic | 25.0% |
| ! | GTTTCATGAAATGAAATTGA+GGG | + | chr7.3:41494231-41494250 | None:intergenic | 25.0% |
| ! | TGAAATCTCAAAAAACATTG+TGG | - | chr7.3:41494957-41494976 | MS.gene89820:CDS | 25.0% |
| !!! | TATGTTCCTAATTTTGATGA+AGG | - | chr7.3:41495678-41495697 | MS.gene89820:CDS | 25.0% |
| !!! | TCAATAATGGTTTTAATGTC+TGG | + | chr7.3:41493797-41493816 | None:intergenic | 25.0% |
| AATCTTCTACTCATAAACCT+AGG | - | chr7.3:41493972-41493991 | MS.gene89820:CDS | 30.0% | |
| AATGTAAACATGTTGTGAGT+TGG | + | chr7.3:41494253-41494272 | None:intergenic | 30.0% | |
| ACTTGTCAATTCTGTCAAAA+AGG | + | chr7.3:41494194-41494213 | None:intergenic | 30.0% | |
| AGAAAGAATACAAATGGCTA+TGG | - | chr7.3:41494447-41494466 | MS.gene89820:CDS | 30.0% | |
| AGAGCAAGAAAGAATACAAA+TGG | - | chr7.3:41494441-41494460 | MS.gene89820:CDS | 30.0% | |
| AGGATTATTGCTAATTATGC+GGG | - | chr7.3:41493863-41493882 | MS.gene89820:CDS | 30.0% | |
| AGTACAAAGAACAGAAAGAA+AGG | - | chr7.3:41494893-41494912 | MS.gene89820:CDS | 30.0% | |
| ATCTTCTACTCATAAACCTA+GGG | - | chr7.3:41493973-41493992 | MS.gene89820:CDS | 30.0% | |
| CAAGCAATGTCACAAAATAT+TGG | - | chr7.3:41495129-41495148 | MS.gene89820:CDS | 30.0% | |
| CAGTTATTCACAATCCTAAT+CGG | + | chr7.3:41494745-41494764 | None:intergenic | 30.0% | |
| CCATTATTGATAAAACCTCT+CGG | - | chr7.3:41493807-41493826 | MS.gene89820:CDS | 30.0% | |
| GAATACTGCATGTTATGTAA+AGG | + | chr7.3:41495294-41495313 | None:intergenic | 30.0% | |
| GAGGATTATTGCTAATTATG+CGG | - | chr7.3:41493862-41493881 | MS.gene89820:CDS | 30.0% | |
| GGATTGAGGAAATTAAACTT+GGG | + | chr7.3:41493893-41493912 | None:intergenic | 30.0% | |
| GGTTTCATGAAATGAAATTG+AGG | + | chr7.3:41494232-41494251 | None:intergenic | 30.0% | |
| TAGAGATTCAACCAAATTTG+TGG | - | chr7.3:41494795-41494814 | MS.gene89820:CDS | 30.0% | |
| TCAATTCCTATGAATAACCA+AGG | - | chr7.3:41495402-41495421 | MS.gene89820:CDS | 30.0% | |
| TCTTTCTGTTCTTTGTACTT+AGG | + | chr7.3:41494892-41494911 | None:intergenic | 30.0% | |
| TGGATTGAGGAAATTAAACT+TGG | + | chr7.3:41493894-41493913 | None:intergenic | 30.0% | |
| TGGTTATTCATAGGAATTGA+TGG | + | chr7.3:41495402-41495421 | None:intergenic | 30.0% | |
| TGTTCTGACATTTCACTATT+AGG | + | chr7.3:41494847-41494866 | None:intergenic | 30.0% | |
| TTTGACAGAATTGACAAGTA+GGG | - | chr7.3:41494195-41494214 | MS.gene89820:CDS | 30.0% | |
| TTTGATGAAGGAAATCTCAA+AGG | - | chr7.3:41495690-41495709 | MS.gene89820:CDS | 30.0% | |
| ! | CAATATTTTGTGACATTGCT+TGG | + | chr7.3:41495131-41495150 | None:intergenic | 30.0% |
| ! | TTTTGACAGAATTGACAAGT+AGG | - | chr7.3:41494194-41494213 | MS.gene89820:CDS | 30.0% |
| !! | CTTTCTTTACTGGTTTAAAC+CGG | + | chr7.3:41494057-41494076 | None:intergenic | 30.0% |
| !! | TTTCTTTACTGGTTTAAACC+GGG | + | chr7.3:41494056-41494075 | None:intergenic | 30.0% |
| !!! | ATAATGGTTTTAATGTCTGG+AGG | + | chr7.3:41493794-41493813 | None:intergenic | 30.0% |
| !!! | TAATGGTTTTAATGTCTGGA+GGG | + | chr7.3:41493793-41493812 | None:intergenic | 30.0% |
| AAAGCTTACAGCACAATTTG+TGG | - | chr7.3:41494153-41494172 | MS.gene89820:CDS | 35.0% | |
| AAATCTCAAAGGACAAGTTC+TGG | - | chr7.3:41495701-41495720 | MS.gene89820:CDS | 35.0% | |
| AATGAATCTAAAAACCTCCC+TGG | - | chr7.3:41495180-41495199 | MS.gene89820:CDS | 35.0% | |
| AATTTCAGCCTTAACAGCAT+TGG | + | chr7.3:41495034-41495053 | None:intergenic | 35.0% | |
| ACATCGATACTATCAGTTTC+CGG | + | chr7.3:41494004-41494023 | None:intergenic | 35.0% | |
| ACTATTAGGAATCAGTTCAC+CGG | + | chr7.3:41494833-41494852 | None:intergenic | 35.0% | |
| AGTTTGGAAGACAATGATGA+AGG | - | chr7.3:41494679-41494698 | MS.gene89820:CDS | 35.0% | |
| ATTGGAAGGCCAATACTATT+AGG | + | chr7.3:41495321-41495340 | None:intergenic | 35.0% | |
| CGATTAGGATTGTGAATAAC+TGG | - | chr7.3:41494743-41494762 | MS.gene89820:CDS | 35.0% | |
| CTTTGAATATGCATCAGCAA+GGG | + | chr7.3:41494284-41494303 | None:intergenic | 35.0% | |
| GAAGGAAGTAGAAATGGATA+TGG | - | chr7.3:41494612-41494631 | MS.gene89820:CDS | 35.0% | |
| GATAGGAGAAACCACAAATT+TGG | + | chr7.3:41494809-41494828 | None:intergenic | 35.0% | |
| GATCCAGAAATTTATCCTCA+GGG | + | chr7.3:41495629-41495648 | None:intergenic | 35.0% | |
| GGATCAAGTACTTTCTTTAC+TGG | + | chr7.3:41494067-41494086 | None:intergenic | 35.0% | |
| GTCACAAAATATTGGAAGTG+AGG | - | chr7.3:41495137-41495156 | MS.gene89820:CDS | 35.0% | |
| GTTTGGAAGACAATGATGAA+GGG | - | chr7.3:41494680-41494699 | MS.gene89820:CDS | 35.0% | |
| TACAAATGGCTATGGTTGAT+TGG | - | chr7.3:41494455-41494474 | MS.gene89820:CDS | 35.0% | |
| TCGGTAGTACCAAAAATATC+AGG | + | chr7.3:41495000-41495019 | None:intergenic | 35.0% | |
| TGATCCAGAAATTTATCCTC+AGG | + | chr7.3:41495630-41495649 | None:intergenic | 35.0% | |
| TGCTGGTAATATGCATGATA+GGG | + | chr7.3:41493923-41493942 | None:intergenic | 35.0% | |
| TGGGTCTTGAATTTGAAAAG+AGG | - | chr7.3:41493843-41493862 | MS.gene89820:CDS | 35.0% | |
| TTATTCACAATCCTAATCGG+TGG | + | chr7.3:41494742-41494761 | None:intergenic | 35.0% | |
| TTGGTTGAATCTCTATATGC+AGG | + | chr7.3:41494790-41494809 | None:intergenic | 35.0% | |
| ! | AAATTTCTGGATCAGCATCA+GGG | - | chr7.3:41495636-41495655 | MS.gene89820:CDS | 35.0% |
| ! | AATAGACTTTGCTGATGATG+AGG | - | chr7.3:41494501-41494520 | MS.gene89820:CDS | 35.0% |
| ! | ATAGGAATTGATGGATGCAT+TGG | + | chr7.3:41495393-41495412 | None:intergenic | 35.0% |
| ! | CAATCTTTGTCTGAAACTGT+TGG | - | chr7.3:41495735-41495754 | MS.gene89820:CDS | 35.0% |
| ! | TAAATTTCTGGATCAGCATC+AGG | - | chr7.3:41495635-41495654 | MS.gene89820:CDS | 35.0% |
| ! | TAGGAATTGATGGATGCATT+GGG | + | chr7.3:41495392-41495411 | None:intergenic | 35.0% |
| ! | TCAATTTCTGCTTGTTAGCA+GGG | + | chr7.3:41495797-41495816 | None:intergenic | 35.0% |
| !! | CCGAGAGGTTTTATCAATAA+TGG | + | chr7.3:41493810-41493829 | None:intergenic | 35.0% |
| !! | TAGTATCGATGTAGCAACTA+CGG | - | chr7.3:41494012-41494031 | MS.gene89820:CDS | 35.0% |
| !!! | AATGGTTTTAATGTCTGGAG+GGG | + | chr7.3:41493792-41493811 | None:intergenic | 35.0% |
| !!! | TGATATTTTTGGTACTACCG+AGG | - | chr7.3:41494999-41495018 | MS.gene89820:CDS | 35.0% |
| AAATGATGAGCAACCTAAGC+AGG | - | chr7.3:41495062-41495081 | MS.gene89820:CDS | 40.0% | |
| AAGAAGATGATGCTGAGGTA+GGG | - | chr7.3:41494590-41494609 | MS.gene89820:CDS | 40.0% | |
| ACATATATACTGATGCGAGC+AGG | + | chr7.3:41495663-41495682 | None:intergenic | 40.0% | |
| ACTAGAGCAAGCTAGGAAAA+TGG | - | chr7.3:41494405-41494424 | MS.gene89820:CDS | 40.0% | |
| AGAGGTTTCCAATGCTGTTA+AGG | - | chr7.3:41495023-41495042 | MS.gene89820:CDS | 40.0% | |
| AGATTCAAAGCTAGTCCAGT+TGG | + | chr7.3:41495261-41495280 | None:intergenic | 40.0% | |
| AGCAACCTAAGCAGGTTATA+TGG | - | chr7.3:41495070-41495089 | MS.gene89820:CDS | 40.0% | |
| AGCCTGAAGGAAAAAATTGC+CGG | - | chr7.3:41495759-41495778 | MS.gene89820:CDS | 40.0% | |
| AGTAGAAATGGATATGGACG+AGG | - | chr7.3:41494618-41494637 | MS.gene89820:CDS | 40.0% | |
| ATATTGTCCTTGAGAAAGCC+TGG | + | chr7.3:41495828-41495847 | None:intergenic | 40.0% | |
| ATCATAAGCATCATCCCTGA+TGG | + | chr7.3:41495489-41495508 | None:intergenic | 40.0% | |
| ATGTGTGAATAGGCTGGAAT+GGG | - | chr7.3:41494375-41494394 | MS.gene89820:CDS | 40.0% | |
| ATGTTATGTAAAGGACCACG+AGG | + | chr7.3:41495285-41495304 | None:intergenic | 40.0% | |
| CAAAATACGAGAAACCACTC+TGG | - | chr7.3:41494924-41494943 | MS.gene89820:CDS | 40.0% | |
| CACAATTTGTGGCTCGTAAT+GGG | - | chr7.3:41494164-41494183 | MS.gene89820:CDS | 40.0% | |
| CCTTGCTGATGCATATTCAA+AGG | - | chr7.3:41494282-41494301 | MS.gene89820:CDS | 40.0% | |
| CCTTTGAATATGCATCAGCA+AGG | + | chr7.3:41494285-41494304 | None:intergenic | 40.0% | |
| CTTGCACATTACAATGTCAG+TGG | - | chr7.3:41495852-41495871 | MS.gene89820:CDS | 40.0% | |
| GATCCCTGAGGATAAATTTC+TGG | - | chr7.3:41495623-41495642 | MS.gene89820:CDS | 40.0% | |
| GCAACCTAAGCAGGTTATAT+GGG | - | chr7.3:41495071-41495090 | MS.gene89820:CDS | 40.0% | |
| GCTAACAAGCAGAAATTGAG+TGG | - | chr7.3:41495798-41495817 | MS.gene89820:CDS | 40.0% | |
| GCTGGTAATATGCATGATAG+GGG | + | chr7.3:41493922-41493941 | None:intergenic | 40.0% | |
| GGCATTCCTTGGTTATTCAT+AGG | + | chr7.3:41495411-41495430 | None:intergenic | 40.0% | |
| TATACAGTTAGGCTTCCTGA+AGG | - | chr7.3:41494103-41494122 | MS.gene89820:CDS | 40.0% | |
| TATGGAAGAAGATGATGCTG+AGG | - | chr7.3:41494585-41494604 | MS.gene89820:CDS | 40.0% | |
| TCAGCATCATCTTCTTCCAT+AGG | + | chr7.3:41494586-41494605 | None:intergenic | 40.0% | |
| TCGTCATACTTCATCCTCTT+TGG | + | chr7.3:41495594-41495613 | None:intergenic | 40.0% | |
| TGCTTGAACGATGTGTGAAT+AGG | - | chr7.3:41494365-41494384 | MS.gene89820:CDS | 40.0% | |
| TTAAACCGGGCAGAAATATC+AGG | + | chr7.3:41494043-41494062 | None:intergenic | 40.0% | |
| TTTGTGGTTTCTCCTATCAC+CGG | - | chr7.3:41494811-41494830 | MS.gene89820:CDS | 40.0% | |
| ! | AGGAATTGATGGATGCATTG+GGG | + | chr7.3:41495391-41495410 | None:intergenic | 40.0% |
| ! | CAGAGTGGTTTCTCGTATTT+TGG | + | chr7.3:41494926-41494945 | None:intergenic | 40.0% |
| ! | CGTACTCGTCCTGATATTTT+TGG | - | chr7.3:41494988-41495007 | MS.gene89820:CDS | 40.0% |
| ! | CTCAATTTCTGCTTGTTAGC+AGG | + | chr7.3:41495798-41495817 | None:intergenic | 40.0% |
| ! | GACACTCTTCTTTAGCTTCT+CGG | + | chr7.3:41494332-41494351 | None:intergenic | 40.0% |
| ! | GGTTGATTGGCATGATTTTG+TGG | - | chr7.3:41494468-41494487 | MS.gene89820:CDS | 40.0% |
| ! | GTGCTGGTAATATGCATGAT+AGG | + | chr7.3:41493924-41493943 | None:intergenic | 40.0% |
| ! | TACTTCATCCTCTTTGGTTC+TGG | + | chr7.3:41495588-41495607 | None:intergenic | 40.0% |
| ! | TCTCGGTTCGTTGCTAAAAT+GGG | - | chr7.3:41493824-41493843 | MS.gene89820:CDS | 40.0% |
| ! | TGATTGGCATGATTTTGTGG+TGG | - | chr7.3:41494471-41494490 | MS.gene89820:CDS | 40.0% |
| !! | AAAGGTTTTGATGCCTCCAA+AGG | - | chr7.3:41494300-41494319 | MS.gene89820:CDS | 40.0% |
| !! | AAGGTTTTGATGCCTCCAAA+GGG | - | chr7.3:41494301-41494320 | MS.gene89820:CDS | 40.0% |
| !! | TCCAATAGTTCTAGTGTGTG+TGG | + | chr7.3:41493759-41493778 | None:intergenic | 40.0% |
| !!! | ATGGTTTTAATGTCTGGAGG+GGG | + | chr7.3:41493791-41493810 | None:intergenic | 40.0% |
| AACTGTATACTGCTCAGCCT+CGG | + | chr7.3:41494092-41494111 | None:intergenic | 45.0% | |
| AAGGGAAGAAGAGTGAAGTC+AGG | - | chr7.3:41494698-41494717 | MS.gene89820:CDS | 45.0% | |
| AATGGATATGGACGAGGAAG+AGG | - | chr7.3:41494624-41494643 | MS.gene89820:CDS | 45.0% | |
| ACAATCCTAATCGGTGGTTC+AGG | + | chr7.3:41494736-41494755 | None:intergenic | 45.0% | |
| ACTGAAGTCATACCAGGTCT+TGG | + | chr7.3:41495222-41495241 | None:intergenic | 45.0% | |
| AGGCTGAGCAGTATACAGTT+AGG | - | chr7.3:41494092-41494111 | MS.gene89820:CDS | 45.0% | |
| AGGGAAGAAGAGTGAAGTCA+GGG | - | chr7.3:41494699-41494718 | MS.gene89820:CDS | 45.0% | |
| ATAAGCATCATCCCTGATGG+TGG | + | chr7.3:41495486-41495505 | None:intergenic | 45.0% | |
| ATCACCTCCTCAAGTGTCAT+TGG | + | chr7.3:41494544-41494563 | None:intergenic | 45.0% | |
| CAATCCTAATCGGTGGTTCA+GGG | + | chr7.3:41494735-41494754 | None:intergenic | 45.0% | |
| CAGAAATTGAGTGGAAAGCC+AGG | - | chr7.3:41495807-41495826 | MS.gene89820:CDS | 45.0% | |
| CCATCCCATATAACCTGCTT+AGG | + | chr7.3:41495078-41495097 | None:intergenic | 45.0% | |
| CCTAAGCAGGTTATATGGGA+TGG | - | chr7.3:41495075-41495094 | MS.gene89820:CDS | 45.0% | |
| CCTGAAGGAAAAAATTGCCG+GGG | - | chr7.3:41495761-41495780 | MS.gene89820:CDS | 45.0% | |
| CGTTCCCTCTTCAACAAGTT+GGG | + | chr7.3:41494650-41494669 | None:intergenic | 45.0% | |
| CTCCCACTGATGGAAATCTT+GGG | - | chr7.3:41493696-41493715 | MS.gene89820:CDS | 45.0% | |
| GAAGAAGATGATGCTGAGGT+AGG | - | chr7.3:41494589-41494608 | MS.gene89820:CDS | 45.0% | |
| GATGTGTGAATAGGCTGGAA+TGG | - | chr7.3:41494374-41494393 | MS.gene89820:CDS | 45.0% | |
| GCACAATTTGTGGCTCGTAA+TGG | - | chr7.3:41494163-41494182 | MS.gene89820:CDS | 45.0% | |
| GCACATTACAATGTCAGTGG+AGG | - | chr7.3:41495855-41495874 | MS.gene89820:CDS | 45.0% | |
| GCCACACACACTAGAACTAT+TGG | - | chr7.3:41493755-41493774 | MS.gene89820:CDS | 45.0% | |
| GCCTGAAGGAAAAAATTGCC+GGG | - | chr7.3:41495760-41495779 | MS.gene89820:CDS | 45.0% | |
| GCGAAACAAGATAACGCCTA+TGG | - | chr7.3:41494567-41494586 | MS.gene89820:CDS | 45.0% | |
| GGTAGGGAAGGAAGTAGAAA+TGG | - | chr7.3:41494606-41494625 | MS.gene89820:CDS | 45.0% | |
| GTTATATGGGATGGTCACAG+CGG | - | chr7.3:41495084-41495103 | MS.gene89820:CDS | 45.0% | |
| TAAGGAGTGAACTGAGATCC+AGG | + | chr7.3:41495447-41495466 | None:intergenic | 45.0% | |
| TATGCATGATAGGGGTCAGA+TGG | + | chr7.3:41493914-41493933 | None:intergenic | 45.0% | |
| TCCCACTGATGGAAATCTTG+GGG | - | chr7.3:41493697-41493716 | MS.gene89820:CDS | 45.0% | |
| TCCCCAAGATTTCCATCAGT+GGG | + | chr7.3:41493701-41493720 | None:intergenic | 45.0% | |
| TCGTTCCCTCTTCAACAAGT+TGG | + | chr7.3:41494651-41494670 | None:intergenic | 45.0% | |
| TGAACGATGTGTGAATAGGC+TGG | - | chr7.3:41494369-41494388 | MS.gene89820:CDS | 45.0% | |
| TGACACTTGAGGAGGTGATA+AGG | - | chr7.3:41494545-41494564 | MS.gene89820:CDS | 45.0% | |
| TTCAAAGCTAGTCCAGTTGG+TGG | + | chr7.3:41495258-41495277 | None:intergenic | 45.0% | |
| ! | AGAAGCCTGATATTTCTGCC+CGG | - | chr7.3:41494035-41494054 | MS.gene89820:CDS | 45.0% |
| ! | AGCATTGGAAACCTCTTCCT+CGG | + | chr7.3:41495019-41495038 | None:intergenic | 45.0% |
| ! | CTCTCGGTTCGTTGCTAAAA+TGG | - | chr7.3:41493823-41493842 | MS.gene89820:CDS | 45.0% |
| ! | GAAACTCAGAAAGCATGTGC+TGG | + | chr7.3:41493940-41493959 | None:intergenic | 45.0% |
| ! | GGAATTGATGGATGCATTGG+GGG | + | chr7.3:41495390-41495409 | None:intergenic | 45.0% |
| ! | TCTGGTTCCTCTGGAAACAA+GGG | + | chr7.3:41495570-41495589 | None:intergenic | 45.0% |
| ! | TTTTGGTACTACCGAGGAAG+AGG | - | chr7.3:41495005-41495024 | MS.gene89820:CDS | 45.0% |
| !! | AGGTTTTGATGCCTCCAAAG+GGG | - | chr7.3:41494302-41494321 | MS.gene89820:CDS | 45.0% |
| !! | CATTTTAGCAACGAACCGAG+AGG | + | chr7.3:41493825-41493844 | None:intergenic | 45.0% |
| !! | CTAGCTTTGAATCTACCTCG+TGG | - | chr7.3:41495267-41495286 | MS.gene89820:CDS | 45.0% |
| !! | TTCTGGTTCCTCTGGAAACA+AGG | + | chr7.3:41495571-41495590 | None:intergenic | 45.0% |
| !!! | TGGTTTTAATGTCTGGAGGG+GGG | + | chr7.3:41493790-41493809 | None:intergenic | 45.0% |
| ACCTCCTCCAATGACACTTG+AGG | - | chr7.3:41494534-41494553 | MS.gene89820:CDS | 50.0% | |
| ACTGGAAGAGACCAGAAGAC+AGG | - | chr7.3:41494761-41494780 | MS.gene89820:CDS | 50.0% | |
| ACTGTATACTGCTCAGCCTC+GGG | + | chr7.3:41494091-41494110 | None:intergenic | 50.0% | |
| AGATGATGCTGAGGTAGGGA+AGG | - | chr7.3:41494594-41494613 | MS.gene89820:CDS | 50.0% | |
| AGCGTTCACTAGAGCAAGCT+AGG | - | chr7.3:41494398-41494417 | MS.gene89820:CDS | 50.0% | |
| ATTTCCATCAGTGGGAGGAG+CGG | + | chr7.3:41493693-41493712 | None:intergenic | 50.0% | |
| CACTGATGGAAATCTTGGGG+AGG | - | chr7.3:41493700-41493719 | MS.gene89820:CDS | 50.0% | |
| CAGAGGAACCAGAACCAAAG+AGG | - | chr7.3:41495577-41495596 | MS.gene89820:CDS | 50.0% | |
| CCAAGATTTCCATCAGTGGG+AGG | + | chr7.3:41493698-41493717 | None:intergenic | 50.0% | |
| CCTCCCACTGATGGAAATCT+TGG | - | chr7.3:41493695-41493714 | MS.gene89820:CDS | 50.0% | |
| CTCCCCAAGATTTCCATCAG+TGG | + | chr7.3:41493702-41493721 | None:intergenic | 50.0% | |
| GAAGTCATACCAGGTCTTGG+AGG | + | chr7.3:41495219-41495238 | None:intergenic | 50.0% | |
| GATGGTCACAGCGGTAGTAT+TGG | - | chr7.3:41495093-41495112 | MS.gene89820:CDS | 50.0% | |
| GGAATCAGTTCACCGGTGAT+AGG | + | chr7.3:41494826-41494845 | None:intergenic | 50.0% | |
| GGACGAACTGAAGTCATACC+AGG | + | chr7.3:41495228-41495247 | None:intergenic | 50.0% | |
| GGATGAGGGTGAGGAACATA+AGG | + | chr7.3:41495465-41495484 | None:intergenic | 50.0% | |
| GTGTGTGTGGCAACAGTTGT+CGG | + | chr7.3:41493746-41493765 | None:intergenic | 50.0% | |
| TATGCAGGAAGCCTGTCTTC+TGG | + | chr7.3:41494775-41494794 | None:intergenic | 50.0% | |
| TCATAAACCTAGGGCTGCAC+CGG | - | chr7.3:41493982-41494001 | MS.gene89820:CDS | 50.0% | |
| TCCTCCAATGACACTTGAGG+AGG | - | chr7.3:41494537-41494556 | MS.gene89820:CDS | 50.0% | |
| TGAAACTGTTGGCAGCCTGA+AGG | - | chr7.3:41495746-41495765 | MS.gene89820:CDS | 50.0% | |
| TGATGGAAATCTTGGGGAGG+AGG | - | chr7.3:41493703-41493722 | MS.gene89820:CDS | 50.0% | |
| TGCACATGACGCAATCTCTC+CGG | - | chr7.3:41495361-41495380 | MS.gene89820:CDS | 50.0% | |
| TGGAAAGCCAGGCTTTCTCA+AGG | - | chr7.3:41495818-41495837 | MS.gene89820:CDS | 50.0% | |
| TTCATCATCCTGTGCCAGAG+TGG | + | chr7.3:41494941-41494960 | None:intergenic | 50.0% | |
| ! | AAGACCCTGAACCACCGATT+AGG | - | chr7.3:41494728-41494747 | MS.gene89820:CDS | 50.0% |
| ! | ACCTCCTCAAGTGTCATTGG+AGG | + | chr7.3:41494541-41494560 | None:intergenic | 50.0% |
| ! | ATTGATGGATGCATTGGGGG+TGG | + | chr7.3:41495387-41495406 | None:intergenic | 50.0% |
| ! | TCCTCAAGTGTCATTGGAGG+AGG | + | chr7.3:41494538-41494557 | None:intergenic | 50.0% |
| !! | AAAGCTAGTCCAGTTGGTGG+CGG | + | chr7.3:41495255-41495274 | None:intergenic | 50.0% |
| !! | AGAGGCCCAACTTGTTGAAG+AGG | - | chr7.3:41494642-41494661 | MS.gene89820:CDS | 50.0% |
| !! | ATCATCCCTGATGGTGGATG+AGG | + | chr7.3:41495480-41495499 | None:intergenic | 50.0% |
| !! | CTCTTTGGTTCTGGTTCCTC+TGG | + | chr7.3:41495579-41495598 | None:intergenic | 50.0% |
| !! | GAAAGTACTTGATCCTCCCG+AGG | - | chr7.3:41494072-41494091 | MS.gene89820:CDS | 50.0% |
| !! | GAGGCCCAACTTGTTGAAGA+GGG | - | chr7.3:41494643-41494662 | MS.gene89820:CDS | 50.0% |
| !! | GATAGGGGTCAGATGGATTG+AGG | + | chr7.3:41493907-41493926 | None:intergenic | 50.0% |
| !! | GCTTCCTGAAGGCATTGCAA+GGG | - | chr7.3:41494114-41494133 | MS.gene89820:CDS | 50.0% |
| !! | TCATCCCTGATGGTGGATGA+GGG | + | chr7.3:41495479-41495498 | None:intergenic | 50.0% |
| !!! | CCCCGGCAATTTTTTCCTTC+AGG | + | chr7.3:41495764-41495783 | None:intergenic | 50.0% |
| AACAAGGGAGGAGCTTCCTC+AGG | + | chr7.3:41495555-41495574 | None:intergenic | 55.0% | |
| ACCACGCTCTCTCAAGGCTA+GGG | + | chr7.3:41495892-41495911 | None:intergenic | 55.0% | |
| ACGAGAAACCACTCTGGCAC+AGG | - | chr7.3:41494930-41494949 | MS.gene89820:CDS | 55.0% | |
| AGCAGGGAGTTGAATCTCCC+CGG | + | chr7.3:41495781-41495800 | None:intergenic | 55.0% | |
| AGCTTCTCGGTCAACCCCTT+TGG | + | chr7.3:41494319-41494338 | None:intergenic | 55.0% | |
| CGATTCTGCTCTGATCCCTG+AGG | - | chr7.3:41495611-41495630 | MS.gene89820:CDS | 55.0% | |
| CTCACCCTCATCCACCATCA+GGG | - | chr7.3:41495472-41495491 | MS.gene89820:CDS | 55.0% | |
| GATACTCCTTGAGGTGGAGG+TGG | + | chr7.3:41495519-41495538 | None:intergenic | 55.0% | |
| GATTGCGTCATGTGCATGCC+TGG | + | chr7.3:41495357-41495376 | None:intergenic | 55.0% | |
| GGAGTGAACTGAGATCCAGG+TGG | + | chr7.3:41495444-41495463 | None:intergenic | 55.0% | |
| GGGAACGAGAGCTGCTAGTT+TGG | - | chr7.3:41494663-41494682 | MS.gene89820:CDS | 55.0% | |
| GTCATACCAGGTCTTGGAGG+AGG | + | chr7.3:41495216-41495235 | None:intergenic | 55.0% | |
| GTCATGTGCATGCCTGGTCT+TGG | + | chr7.3:41495351-41495370 | None:intergenic | 55.0% | |
| GTCTTGGTGGGGGAATTGGA+AGG | + | chr7.3:41495335-41495354 | None:intergenic | 55.0% | |
| GTGAACTGAGATCCAGGTGG+TGG | + | chr7.3:41495441-41495460 | None:intergenic | 55.0% | |
| GTGGAGGAATGGGCATTCCT+TGG | + | chr7.3:41495422-41495441 | None:intergenic | 55.0% | |
| TCCTCCCTTGCAATGCCTTC+AGG | + | chr7.3:41494121-41494140 | None:intergenic | 55.0% | |
| TCTACCACCACGCTCTCTCA+AGG | + | chr7.3:41495898-41495917 | None:intergenic | 55.0% | |
| TTCTCGGTCAACCCCTTTGG+AGG | + | chr7.3:41494316-41494335 | None:intergenic | 55.0% | |
| TTTCCATCAGTGGGAGGAGC+GGG | + | chr7.3:41493692-41493711 | None:intergenic | 55.0% | |
| ! | AACTGAGATCCAGGTGGTGG+AGG | + | chr7.3:41495438-41495457 | None:intergenic | 55.0% |
| ! | AGCTCCTCCCTTGTTTCCAG+AGG | - | chr7.3:41495560-41495579 | MS.gene89820:CDS | 55.0% |
| ! | GGAGCGGGTAGAGGAAGTAT+AGG | + | chr7.3:41493677-41493696 | None:intergenic | 55.0% |
| ! | GGTTCCTCTGGAAACAAGGG+AGG | + | chr7.3:41495567-41495586 | None:intergenic | 55.0% |
| !! | AGATCCAGGTGGTGGAGGAA+TGG | + | chr7.3:41495433-41495452 | None:intergenic | 55.0% |
| !! | ATGTGCATGCCTGGTCTTGG+TGG | + | chr7.3:41495348-41495367 | None:intergenic | 55.0% |
| !! | GATCCAGGTGGTGGAGGAAT+GGG | + | chr7.3:41495432-41495451 | None:intergenic | 55.0% |
| !! | GGCTTCCTGAAGGCATTGCA+AGG | - | chr7.3:41494113-41494132 | MS.gene89820:CDS | 55.0% |
| !! | TCCTGAAGGCATTGCAAGGG+AGG | - | chr7.3:41494117-41494136 | MS.gene89820:CDS | 55.0% |
| !! | TGTGCATGCCTGGTCTTGGT+GGG | + | chr7.3:41495347-41495366 | None:intergenic | 55.0% |
| AAGGGAGGAGCTTCCTCAGG+AGG | + | chr7.3:41495552-41495571 | None:intergenic | 60.0% | |
| ACTCCTTGAGGTGGAGGTGG+TGG | + | chr7.3:41495516-41495535 | None:intergenic | 60.0% | |
| ATGCCCATTCCTCCACCACC+TGG | - | chr7.3:41495426-41495445 | MS.gene89820:CDS | 60.0% | |
| ATGGATGCATTGGGGGTGGC+CGG | + | chr7.3:41495383-41495402 | None:intergenic | 60.0% | |
| CACCACGCTCTCTCAAGGCT+AGG | + | chr7.3:41495893-41495912 | None:intergenic | 60.0% | |
| CATCCACCACCTCCACCTCA+AGG | - | chr7.3:41495510-41495529 | MS.gene89820:CDS | 60.0% | |
| CCAATTCCCCCACCAAGACC+AGG | - | chr7.3:41495336-41495355 | MS.gene89820:CDS | 60.0% | |
| CCTCACCCTCATCCACCATC+AGG | - | chr7.3:41495471-41495490 | MS.gene89820:CDS | 60.0% | |
| GGGGATACTCCTTGAGGTGG+AGG | + | chr7.3:41495522-41495541 | None:intergenic | 60.0% | |
| GGTGGGGATACTCCTTGAGG+TGG | + | chr7.3:41495525-41495544 | None:intergenic | 60.0% | |
| GTATACTGCTCAGCCTCGGG+AGG | + | chr7.3:41494088-41494107 | None:intergenic | 60.0% | |
| TCAGTTTCCGGTGCAGCCCT+AGG | + | chr7.3:41493992-41494011 | None:intergenic | 60.0% | |
| TCTTGGGGAGGAGGTGATCG+AGG | - | chr7.3:41493712-41493731 | MS.gene89820:CDS | 60.0% | |
| !! | AGTCCAGTTGGTGGCGGAAG+AGG | + | chr7.3:41495249-41495268 | None:intergenic | 60.0% |
| !! | CCTGATGGTGGATGAGGGTG+AGG | + | chr7.3:41495474-41495493 | None:intergenic | 60.0% |
| !! | CCTGGTCTTGGTGGGGGAAT+TGG | + | chr7.3:41495339-41495358 | None:intergenic | 60.0% |
| !! | CTAGCCTTGAGAGAGCGTGG+TGG | - | chr7.3:41495891-41495910 | MS.gene89820:CDS | 60.0% |
| !! | GTGCATGCCTGGTCTTGGTG+GGG | + | chr7.3:41495346-41495365 | None:intergenic | 60.0% |
| !! | TCCCTAGCCTTGAGAGAGCG+TGG | - | chr7.3:41495888-41495907 | MS.gene89820:CDS | 60.0% |
| !! | TGCATGCCTGGTCTTGGTGG+GGG | + | chr7.3:41495345-41495364 | None:intergenic | 60.0% |
| CGTCCTCTTCCGCCACCAAC+TGG | - | chr7.3:41495243-41495262 | MS.gene89820:CDS | 65.0% | |
| CTACCCGCTCCTCCCACTGA+TGG | - | chr7.3:41493686-41493705 | MS.gene89820:CDS | 65.0% | |
| GCTGCACCTCCTCCAAGACC+TGG | - | chr7.3:41495207-41495226 | MS.gene89820:CDS | 65.0% | |
| GGAGGAGCTTCCTCAGGAGG+CGG | + | chr7.3:41495549-41495568 | None:intergenic | 65.0% | |
| GGCGGTGGGGATACTCCTTG+AGG | + | chr7.3:41495528-41495547 | None:intergenic | 65.0% | |
| TCAGTGGGAGGAGCGGGTAG+AGG | + | chr7.3:41493686-41493705 | None:intergenic | 65.0% | |
| ! | GAGGAGGTGCAGCAGGACCA+GGG | + | chr7.3:41495200-41495219 | None:intergenic | 65.0% |
| ! | GGTCTTGGAGGAGGTGCAGC+AGG | + | chr7.3:41495207-41495226 | None:intergenic | 65.0% |
| CTTCCTCAGGAGGCGGCGGT+GGG | + | chr7.3:41495542-41495561 | None:intergenic | 70.0% | |
| GAGGTGCAGCAGGACCAGGG+AGG | + | chr7.3:41495197-41495216 | None:intergenic | 70.0% | |
| GGAGCTTCCTCAGGAGGCGG+CGG | + | chr7.3:41495546-41495565 | None:intergenic | 70.0% | |
| TTCCTCAGGAGGCGGCGGTG+GGG | + | chr7.3:41495541-41495560 | None:intergenic | 70.0% | |
| ! | GGAGGAGGTGCAGCAGGACC+AGG | + | chr7.3:41495201-41495220 | None:intergenic | 70.0% |
| ATCCCCACCGCCGCCTCCTG+AGG | - | chr7.3:41495536-41495555 | MS.gene89820:CDS | 75.0% | |
| GCTTCCTCAGGAGGCGGCGG+TGG | + | chr7.3:41495543-41495562 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 41493671 | 41495926 | 41493671 | ID=MS.gene89820 |
| chr7.3 | mRNA | 41493671 | 41495926 | 41493671 | ID=MS.gene89820.t1;Parent=MS.gene89820 |
| chr7.3 | exon | 41493671 | 41495926 | 41493671 | ID=MS.gene89820.t1.exon1;Parent=MS.gene89820.t1 |
| chr7.3 | CDS | 41493671 | 41495926 | 41493671 | ID=cds.MS.gene89820.t1;Parent=MS.gene89820.t1 |
| Gene Sequence |
| Protein sequence |
