Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90522.t1 | XP_013444964.1 | 91.1 | 235 | 21 | 0 | 1 | 235 | 1 | 235 | 3.00E-119 | 438 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90522.t1 | Q8H0F2 | 31.2 | 237 | 150 | 4 | 11 | 235 | 4 | 239 | 3.7e-25 | 116.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90522.t1 | A0A072TNB8 | 91.1 | 235 | 21 | 0 | 1 | 235 | 1 | 235 | 2.2e-119 | 438.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051422 | MS.gene90522 | 0.804119 | 2.52E-49 | -1.69E-46 |
| MS.gene056590 | MS.gene90522 | 0.822827 | 1.92E-53 | -1.69E-46 |
| MS.gene056591 | MS.gene90522 | 0.821797 | 3.33E-53 | -1.69E-46 |
| MS.gene056697 | MS.gene90522 | 0.817101 | 3.93E-52 | -1.69E-46 |
| MS.gene056856 | MS.gene90522 | 0.82064 | 6.16E-53 | -1.69E-46 |
| MS.gene057548 | MS.gene90522 | 0.81946 | 1.15E-52 | -1.69E-46 |
| MS.gene057549 | MS.gene90522 | 0.801959 | 7.04E-49 | -1.69E-46 |
| MS.gene058603 | MS.gene90522 | 0.806765 | 7.02E-50 | -1.69E-46 |
| MS.gene05926 | MS.gene90522 | 0.81834 | 2.06E-52 | -1.69E-46 |
| MS.gene059315 | MS.gene90522 | 0.805501 | 1.29E-49 | -1.69E-46 |
| MS.gene061044 | MS.gene90522 | 0.800771 | 1.23E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90522.t1 | MTR_8g032950 | 90.000 | 240 | 23 | 1 | 1 | 240 | 1 | 239 | 7.41e-150 | 427 |
| MS.gene90522.t1 | MTR_4g117960 | 66.531 | 245 | 80 | 2 | 4 | 247 | 3 | 246 | 5.92e-110 | 325 |
| MS.gene90522.t1 | MTR_2g034990 | 62.917 | 240 | 85 | 3 | 4 | 240 | 3 | 241 | 3.59e-97 | 293 |
| MS.gene90522.t1 | MTR_6g035265 | 62.343 | 239 | 83 | 4 | 4 | 242 | 3 | 234 | 1.18e-92 | 281 |
| MS.gene90522.t1 | MTR_2g035020 | 60.417 | 240 | 91 | 2 | 4 | 240 | 3 | 241 | 5.13e-92 | 280 |
| MS.gene90522.t1 | MTR_4g117980 | 58.678 | 242 | 96 | 2 | 4 | 242 | 3 | 243 | 3.70e-91 | 277 |
| MS.gene90522.t1 | MTR_6g035185 | 59.583 | 240 | 93 | 2 | 4 | 240 | 3 | 241 | 3.24e-90 | 275 |
| MS.gene90522.t1 | MTR_7g012120 | 59.664 | 238 | 94 | 2 | 4 | 240 | 8 | 244 | 3.45e-89 | 272 |
| MS.gene90522.t1 | MTR_5g029800 | 59.426 | 244 | 91 | 3 | 4 | 244 | 3 | 241 | 1.03e-82 | 255 |
| MS.gene90522.t1 | MTR_5g067170 | 57.317 | 246 | 97 | 4 | 3 | 244 | 2 | 243 | 1.66e-79 | 247 |
| MS.gene90522.t1 | MTR_4g117890 | 49.590 | 244 | 111 | 4 | 1 | 242 | 2 | 235 | 5.08e-70 | 223 |
| MS.gene90522.t1 | MTR_0536s0020 | 49.372 | 239 | 109 | 4 | 6 | 242 | 12 | 240 | 7.97e-70 | 222 |
| MS.gene90522.t1 | MTR_4g118000 | 50.215 | 233 | 105 | 3 | 8 | 240 | 8 | 229 | 5.25e-67 | 214 |
| MS.gene90522.t1 | MTR_0536s0010 | 48.472 | 229 | 109 | 2 | 7 | 235 | 16 | 235 | 5.60e-66 | 212 |
| MS.gene90522.t1 | MTR_4g117950 | 47.881 | 236 | 114 | 3 | 7 | 242 | 1 | 227 | 1.18e-61 | 201 |
| MS.gene90522.t1 | MTR_4g117970 | 58.025 | 162 | 66 | 2 | 79 | 240 | 53 | 212 | 1.42e-53 | 178 |
| MS.gene90522.t1 | MTR_0536s0030 | 45.355 | 183 | 89 | 3 | 39 | 219 | 7 | 180 | 2.13e-45 | 155 |
| MS.gene90522.t1 | MTR_2g035050 | 66.372 | 113 | 38 | 0 | 4 | 116 | 3 | 115 | 1.91e-42 | 141 |
| MS.gene90522.t1 | MTR_2g035040 | 56.800 | 125 | 50 | 3 | 119 | 240 | 23 | 146 | 1.36e-36 | 133 |
| MS.gene90522.t1 | MTR_4g031800 | 34.615 | 234 | 147 | 5 | 9 | 240 | 6 | 235 | 1.78e-36 | 134 |
| MS.gene90522.t1 | MTR_7g070800 | 34.914 | 232 | 137 | 3 | 7 | 229 | 1 | 227 | 5.58e-34 | 127 |
| MS.gene90522.t1 | MTR_7g070780 | 35.808 | 229 | 133 | 3 | 10 | 229 | 9 | 232 | 1.08e-33 | 127 |
| MS.gene90522.t1 | MTR_7g070740 | 36.975 | 238 | 130 | 8 | 12 | 234 | 9 | 241 | 4.45e-33 | 125 |
| MS.gene90522.t1 | MTR_7g055710 | 32.051 | 234 | 149 | 3 | 11 | 235 | 10 | 242 | 9.64e-32 | 122 |
| MS.gene90522.t1 | MTR_5g016660 | 32.479 | 234 | 148 | 3 | 11 | 235 | 9 | 241 | 1.20e-31 | 121 |
| MS.gene90522.t1 | MTR_7g070860 | 33.478 | 230 | 139 | 3 | 9 | 229 | 4 | 228 | 1.82e-31 | 120 |
| MS.gene90522.t1 | MTR_4g485630 | 31.933 | 238 | 149 | 5 | 11 | 240 | 8 | 240 | 9.83e-31 | 119 |
| MS.gene90522.t1 | MTR_7g070660 | 33.476 | 233 | 145 | 3 | 11 | 234 | 10 | 241 | 1.09e-30 | 119 |
| MS.gene90522.t1 | MTR_7g070810 | 31.356 | 236 | 152 | 3 | 9 | 235 | 6 | 240 | 1.47e-30 | 118 |
| MS.gene90522.t1 | MTR_4g108250 | 33.195 | 241 | 140 | 7 | 11 | 235 | 10 | 245 | 3.05e-30 | 117 |
| MS.gene90522.t1 | MTR_7g070930 | 33.333 | 228 | 138 | 3 | 11 | 229 | 13 | 235 | 1.91e-29 | 115 |
| MS.gene90522.t1 | MTR_7g070940 | 32.203 | 236 | 150 | 3 | 9 | 235 | 6 | 240 | 3.52e-29 | 114 |
| MS.gene90522.t1 | MTR_7g070610 | 32.127 | 221 | 139 | 4 | 11 | 221 | 12 | 231 | 6.87e-28 | 111 |
| MS.gene90522.t1 | MTR_5g039900 | 31.356 | 236 | 146 | 4 | 11 | 234 | 12 | 243 | 7.19e-28 | 111 |
| MS.gene90522.t1 | MTR_7g070870 | 31.646 | 237 | 147 | 5 | 9 | 235 | 16 | 247 | 1.36e-27 | 110 |
| MS.gene90522.t1 | MTR_7g071040 | 32.530 | 249 | 153 | 5 | 1 | 235 | 1 | 248 | 1.38e-27 | 110 |
| MS.gene90522.t1 | MTR_6g035295 | 32.917 | 240 | 141 | 7 | 11 | 235 | 11 | 245 | 5.93e-27 | 108 |
| MS.gene90522.t1 | MTR_7g070910 | 31.532 | 222 | 139 | 4 | 12 | 221 | 9 | 229 | 8.47e-26 | 105 |
| MS.gene90522.t1 | MTR_7g071050 | 36.872 | 179 | 98 | 4 | 11 | 183 | 12 | 181 | 3.58e-25 | 103 |
| MS.gene90522.t1 | MTR_7g117405 | 31.718 | 227 | 143 | 6 | 14 | 229 | 12 | 237 | 7.26e-25 | 102 |
| MS.gene90522.t1 | MTR_4g485620 | 29.907 | 214 | 129 | 3 | 24 | 220 | 1 | 210 | 1.30e-24 | 101 |
| MS.gene90522.t1 | MTR_7g102450 | 33.028 | 218 | 124 | 5 | 14 | 221 | 11 | 216 | 1.82e-24 | 101 |
| MS.gene90522.t1 | MTR_5g045970 | 30.802 | 237 | 141 | 8 | 16 | 235 | 20 | 250 | 1.23e-23 | 99.4 |
| MS.gene90522.t1 | MTR_1g040310 | 31.687 | 243 | 152 | 6 | 4 | 235 | 5 | 244 | 2.30e-23 | 98.6 |
| MS.gene90522.t1 | MTR_7g102550 | 27.273 | 231 | 153 | 5 | 14 | 230 | 9 | 238 | 6.89e-23 | 97.1 |
| MS.gene90522.t1 | MTR_5g045960 | 28.270 | 237 | 155 | 7 | 13 | 235 | 8 | 243 | 1.25e-22 | 96.3 |
| MS.gene90522.t1 | MTR_1g062380 | 29.832 | 238 | 142 | 7 | 16 | 235 | 20 | 250 | 1.48e-22 | 96.3 |
| MS.gene90522.t1 | MTR_8g066610 | 28.251 | 223 | 147 | 3 | 10 | 219 | 7 | 229 | 1.56e-22 | 95.9 |
| MS.gene90522.t1 | MTR_5g040030 | 28.452 | 239 | 154 | 5 | 9 | 234 | 11 | 245 | 1.97e-22 | 95.9 |
| MS.gene90522.t1 | MTR_7g470590 | 40.870 | 115 | 65 | 2 | 11 | 122 | 10 | 124 | 3.74e-22 | 88.6 |
| MS.gene90522.t1 | MTR_7g070570 | 40.870 | 115 | 65 | 2 | 11 | 122 | 10 | 124 | 3.74e-22 | 88.6 |
| MS.gene90522.t1 | MTR_7g102560 | 30.357 | 224 | 138 | 7 | 12 | 221 | 7 | 226 | 2.72e-21 | 92.4 |
| MS.gene90522.t1 | MTR_4g485590 | 30.172 | 232 | 133 | 7 | 15 | 240 | 12 | 220 | 5.28e-21 | 91.3 |
| MS.gene90522.t1 | MTR_7g039570 | 27.966 | 236 | 152 | 5 | 11 | 233 | 13 | 243 | 3.22e-19 | 84.3 |
| MS.gene90522.t1 | MTR_4g485640 | 28.502 | 207 | 125 | 4 | 22 | 219 | 219 | 411 | 5.84e-19 | 85.9 |
| MS.gene90522.t1 | MTR_8g044140 | 29.048 | 210 | 134 | 5 | 37 | 235 | 2 | 207 | 9.39e-19 | 85.1 |
| MS.gene90522.t1 | MTR_4g024020 | 29.911 | 224 | 141 | 6 | 12 | 219 | 7 | 230 | 3.05e-18 | 83.6 |
| MS.gene90522.t1 | MTR_7g102490 | 26.906 | 223 | 148 | 6 | 12 | 219 | 7 | 229 | 2.88e-17 | 80.9 |
| MS.gene90522.t1 | MTR_7g102460 | 27.027 | 222 | 148 | 6 | 12 | 219 | 7 | 228 | 5.02e-17 | 80.1 |
| MS.gene90522.t1 | MTR_7g102520 | 27.149 | 221 | 131 | 8 | 15 | 215 | 15 | 225 | 1.22e-13 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90522.t1 | AT2G36770 | 33.475 | 236 | 142 | 6 | 13 | 234 | 13 | 247 | 1.36e-27 | 110 |
| MS.gene90522.t1 | AT2G36750 | 33.617 | 235 | 142 | 7 | 13 | 234 | 9 | 242 | 1.66e-26 | 107 |
| MS.gene90522.t1 | AT2G36790 | 31.696 | 224 | 139 | 6 | 10 | 219 | 9 | 232 | 4.09e-26 | 106 |
| MS.gene90522.t1 | AT2G36780 | 30.380 | 237 | 150 | 6 | 13 | 235 | 13 | 248 | 5.89e-25 | 103 |
| MS.gene90522.t1 | AT4G34131 | 28.571 | 252 | 154 | 7 | 9 | 240 | 7 | 252 | 8.82e-24 | 99.8 |
| MS.gene90522.t1 | AT2G36800 | 31.532 | 222 | 137 | 6 | 13 | 219 | 11 | 232 | 1.55e-23 | 99.0 |
| MS.gene90522.t1 | AT4G34138 | 30.677 | 251 | 145 | 10 | 12 | 240 | 9 | 252 | 3.61e-23 | 97.8 |
| MS.gene90522.t1 | AT2G15480 | 25.397 | 252 | 166 | 6 | 7 | 240 | 5 | 252 | 6.55e-23 | 97.1 |
| MS.gene90522.t1 | AT2G15480 | 25.397 | 252 | 166 | 6 | 7 | 240 | 5 | 252 | 6.96e-23 | 97.1 |
| MS.gene90522.t1 | AT3G53160 | 32.489 | 237 | 147 | 5 | 10 | 234 | 6 | 241 | 2.09e-22 | 95.9 |
| MS.gene90522.t1 | AT2G36760 | 29.046 | 241 | 148 | 7 | 13 | 235 | 13 | 248 | 5.75e-22 | 94.7 |
| MS.gene90522.t1 | AT2G15490 | 25.620 | 242 | 162 | 4 | 15 | 240 | 10 | 249 | 1.21e-21 | 93.6 |
| MS.gene90522.t1 | AT2G15490 | 25.620 | 242 | 162 | 4 | 15 | 240 | 10 | 249 | 1.28e-21 | 93.6 |
| MS.gene90522.t1 | AT3G53150 | 31.933 | 238 | 137 | 10 | 1 | 219 | 10 | 241 | 3.25e-21 | 92.4 |
| MS.gene90522.t1 | AT2G15490 | 27.451 | 204 | 136 | 3 | 15 | 208 | 10 | 211 | 1.10e-20 | 88.6 |
| MS.gene90522.t1 | AT4G34135 | 26.210 | 248 | 165 | 6 | 9 | 240 | 8 | 253 | 3.75e-20 | 88.2 |
| MS.gene90522.t1 | AT4G34135 | 27.016 | 248 | 163 | 7 | 9 | 240 | 8 | 253 | 7.62e-20 | 88.6 |
Find 77 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATATAAGTGGTTTAGTCTT+AGG | 0.184960 | 8.3:-24097322 | None:intergenic |
| GTGATAGAATGAGGAAAATT+TGG | 0.221472 | 8.3:-24097380 | None:intergenic |
| CATATCTTGGCCATGGTGTC+AGG | 0.259979 | 8.3:-24097125 | None:intergenic |
| ATGAAGGCAATACGTCATTT+TGG | 0.288806 | 8.3:+24098993 | MS.gene90522:CDS |
| ACCTGGTCATATGATTCCTT+TGG | 0.293652 | 8.3:+24096911 | MS.gene90522:CDS |
| CTTCTCCACGAATTCTCTAA+TGG | 0.295516 | 8.3:-24097174 | None:intergenic |
| CATTGCACCTTTACATATCT+TGG | 0.306161 | 8.3:-24097138 | None:intergenic |
| GGTGGAGATATGAGGCTTAT+TGG | 0.342361 | 8.3:-24097252 | None:intergenic |
| AGAGAGATTTGGTAAAGAAA+TGG | 0.342838 | 8.3:-24097001 | None:intergenic |
| AACAACTTTGCTGAACTTGA+TGG | 0.353410 | 8.3:+24097488 | MS.gene90522:CDS |
| GTATTATTGGAAAGTAAAAT+AGG | 0.363359 | 8.3:-24099021 | None:intergenic |
| TCAAATGCGATGTATAGTTT+TGG | 0.374670 | 8.3:-24097419 | None:intergenic |
| TTCTCCACGAATTCTCTAAT+GGG | 0.390301 | 8.3:-24097173 | None:intergenic |
| CGAATTCTCTAATGGGTTCA+TGG | 0.405717 | 8.3:-24097166 | None:intergenic |
| ATATAAGTGGTTTAGTCTTA+GGG | 0.407729 | 8.3:-24097321 | None:intergenic |
| GAGAGATTTGGTAAAGAAAT+GGG | 0.411846 | 8.3:-24097000 | None:intergenic |
| CCTGGTCATATGATTCCTTT+GGG | 0.419398 | 8.3:+24096912 | MS.gene90522:CDS |
| GAAATGGGCGTTGGAGGGAG+TGG | 0.429775 | 8.3:-24096985 | None:intergenic |
| ATCGATGGAGGAGAGAGATT+TGG | 0.438186 | 8.3:-24097012 | None:intergenic |
| ATATGACCAGGTGATAGAAA+TGG | 0.439130 | 8.3:-24096900 | None:intergenic |
| TGAGGCAATCCGCAAAAGTA+AGG | 0.442335 | 8.3:+24097454 | MS.gene90522:CDS |
| CGTCGGGAAGATCGACTTGT+TGG | 0.444464 | 8.3:-24097073 | None:intergenic |
| TTCATTCCATTTCTATCACC+TGG | 0.465098 | 8.3:+24096894 | MS.gene90522:CDS |
| GGTAAAGAAATGGGCGTTGG+AGG | 0.467446 | 8.3:-24096991 | None:intergenic |
| AAAACTATACATCGCATTTG+AGG | 0.468748 | 8.3:+24097421 | MS.gene90522:CDS |
| AGTTCTTGTCAGAATATAAG+TGG | 0.472513 | 8.3:-24097334 | None:intergenic |
| TTGCCGACTGTGTATACCCT+TGG | 0.475253 | 8.3:+24097216 | MS.gene90522:CDS |
| TTAGTCTTAGGGATTCTATG+AGG | 0.480195 | 8.3:-24097310 | None:intergenic |
| GGTGTCAGGGTTAGCGGTGG+AGG | 0.484411 | 8.3:-24097111 | None:intergenic |
| GTCGGGAAGATCGACTTGTT+GGG | 0.496688 | 8.3:-24097072 | None:intergenic |
| GGCCATGGTGTCAGGGTTAG+CGG | 0.497248 | 8.3:-24097117 | None:intergenic |
| CAGTCGGCAATGATGTAGTC+AGG | 0.498245 | 8.3:-24097203 | None:intergenic |
| GGAATGAAATGAAGTTTCAA+TGG | 0.503407 | 8.3:-24096879 | None:intergenic |
| TGAACCCATTAGAGAATTCG+TGG | 0.503916 | 8.3:+24097169 | MS.gene90522:CDS |
| GCAGCTTTGTTTGCATCCCA+TGG | 0.505804 | 8.3:+24096942 | MS.gene90522:CDS |
| TTTGGTAAAGAAATGGGCGT+TGG | 0.514520 | 8.3:-24096994 | None:intergenic |
| TGATCGTGACTTGTTGGCCA+TGG | 0.514668 | 8.3:-24096959 | None:intergenic |
| TCAGCAATGGAAAATGGTGT+TGG | 0.516834 | 8.3:+24096846 | None:intergenic |
| ACCTTTACATATCTTGGCCA+TGG | 0.518558 | 8.3:-24097132 | None:intergenic |
| GACAATGATTCAACACCGTC+GGG | 0.529459 | 8.3:-24097089 | None:intergenic |
| AGGGGAAGTCAACGGTGTGA+AGG | 0.532277 | 8.3:-24097049 | None:intergenic |
| GTAAAGAAATGGGCGTTGGA+GGG | 0.533872 | 8.3:-24096990 | None:intergenic |
| AAGGCAATGGTGGAGATATG+AGG | 0.540237 | 8.3:-24097260 | None:intergenic |
| TTGGTCAAGTCATTAATCCA+AGG | 0.552314 | 8.3:-24097233 | None:intergenic |
| GAAGATCGACTTGTTGGGAG+GGG | 0.552799 | 8.3:-24097067 | None:intergenic |
| GGAAGTCAACGGTGTGAAGG+CGG | 0.561740 | 8.3:-24097046 | None:intergenic |
| CCCAAAGGAATCATATGACC+AGG | 0.562986 | 8.3:-24096912 | None:intergenic |
| GAGGAAAAGGTGATAGAATG+AGG | 0.565861 | 8.3:-24097389 | None:intergenic |
| CATTAGAGAATTCGTGGAGA+AGG | 0.573370 | 8.3:+24097175 | MS.gene90522:CDS |
| TAGTCTTAGGGATTCTATGA+GGG | 0.574610 | 8.3:-24097309 | None:intergenic |
| TGGTGATGATCGTGACTTGT+TGG | 0.578665 | 8.3:-24096965 | None:intergenic |
| TATACATCGCATTTGAGGAA+AGG | 0.579837 | 8.3:+24097426 | MS.gene90522:CDS |
| GATCGTGACTTGTTGGCCAT+GGG | 0.580057 | 8.3:-24096958 | None:intergenic |
| ACCATGGCCAAGATATGTAA+AGG | 0.580374 | 8.3:+24097131 | MS.gene90522:CDS |
| GGACAATGATTCAACACCGT+CGG | 0.581120 | 8.3:-24097090 | None:intergenic |
| ATATCTTGGCCATGGTGTCA+GGG | 0.583116 | 8.3:-24097124 | None:intergenic |
| TGGTCAAGTCATTAATCCAA+GGG | 0.584896 | 8.3:-24097232 | None:intergenic |
| GAAGAATGCGGTGAAGGCAA+TGG | 0.587503 | 8.3:-24097273 | None:intergenic |
| GAATGCGGTGAAGGCAATGG+TGG | 0.589149 | 8.3:-24097270 | None:intergenic |
| GGGAAGATCGACTTGTTGGG+AGG | 0.591341 | 8.3:-24097069 | None:intergenic |
| AGTCAACGGTGTGAAGGCGG+AGG | 0.591650 | 8.3:-24097043 | None:intergenic |
| CTATGAGGGATACTGTAAAG+AGG | 0.601294 | 8.3:-24097295 | None:intergenic |
| CACCGCTAACCCTGACACCA+TGG | 0.606001 | 8.3:+24097115 | MS.gene90522:CDS |
| AAAGAGGAAGAATGCGGTGA+AGG | 0.610474 | 8.3:-24097279 | None:intergenic |
| GAGGCAATCCGCAAAAGTAA+GGG | 0.610869 | 8.3:+24097455 | MS.gene90522:CDS |
| GGAAGATCGACTTGTTGGGA+GGG | 0.611966 | 8.3:-24097068 | None:intergenic |
| CATGGTGTCAGGGTTAGCGG+TGG | 0.612765 | 8.3:-24097114 | None:intergenic |
| CAAACACTATGAGAAAACCA+TGG | 0.618415 | 8.3:+24097523 | MS.gene90522:CDS |
| ATTTGAGGAAAGGATGCTTG+AGG | 0.620323 | 8.3:+24097436 | MS.gene90522:CDS |
| AATCCAAGGGTATACACAGT+CGG | 0.638606 | 8.3:-24097219 | None:intergenic |
| AAACACTATGAGAAAACCAT+GGG | 0.643342 | 8.3:+24097524 | MS.gene90522:CDS |
| AAAGCTGCTATGTCACCCAA+AGG | 0.671212 | 8.3:-24096927 | None:intergenic |
| TTGTTGGGAGGGGAAGTCAA+CGG | 0.692487 | 8.3:-24097057 | None:intergenic |
| TACTGTAAAGAGGAAGAATG+CGG | 0.695334 | 8.3:-24097285 | None:intergenic |
| CAACAAGTCGATCTTCCCGA+CGG | 0.707738 | 8.3:+24097074 | MS.gene90522:CDS |
| AAAATGGTGTTGGAGTTGAA+CGG | 0.721065 | 8.3:+24096856 | MS.gene90522:CDS |
| ATTCTCTAATGGGTTCATGG+AGG | 0.749674 | 8.3:-24097163 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTTTAATACACATAATATT+AGG | - | chr8.3:24098335-24098354 | None:intergenic | 15.0% |
| !! | TAATCTATACCTATTAATAA+AGG | + | chr8.3:24098412-24098431 | MS.gene90522:intron | 15.0% |
| !! | AGAAACATTGAAAATAAGAA+AGG | + | chr8.3:24097857-24097876 | MS.gene90522:intron | 20.0% |
| !! | ATAAGAAAGGATTTATCATT+AGG | + | chr8.3:24097870-24097889 | MS.gene90522:intron | 20.0% |
| !! | TAAGAAAGGATTTATCATTA+GGG | + | chr8.3:24097871-24097890 | MS.gene90522:intron | 20.0% |
| !!! | AAAGTATTGCCTTTATTAAT+AGG | - | chr8.3:24098424-24098443 | None:intergenic | 20.0% |
| ! | AAGAAAGGATTTATCATTAG+GGG | + | chr8.3:24097872-24097891 | MS.gene90522:intron | 25.0% |
| ! | ACAGAAAAATCAGTGAATAA+TGG | + | chr8.3:24098719-24098738 | MS.gene90522:intron | 25.0% |
| ! | CAGAAAAATCAGTGAATAAT+GGG | + | chr8.3:24098720-24098739 | MS.gene90522:intron | 25.0% |
| ! | TACCTTCATAACTAATATGT+TGG | - | chr8.3:24098800-24098819 | None:intergenic | 25.0% |
| ! | TCACATGTTCTAATATATAG+AGG | + | chr8.3:24098904-24098923 | MS.gene90522:intron | 25.0% |
| ! | TGAATTATTCAAGTGATTTG+CGG | - | chr8.3:24098309-24098328 | None:intergenic | 25.0% |
| ! | TTATAAAGGAAAAGAGAAAG+TGG | + | chr8.3:24098105-24098124 | MS.gene90522:intron | 25.0% |
| ! | TTCCAACATATTAGTTATGA+AGG | + | chr8.3:24098795-24098814 | MS.gene90522:intron | 25.0% |
| !! | AATATAAGTGGTTTAGTCTT+AGG | - | chr8.3:24097325-24097344 | None:intergenic | 25.0% |
| !! | ATAAAGGCAATACTTTTGTT+TGG | + | chr8.3:24098428-24098447 | MS.gene90522:intron | 25.0% |
| !! | CAGTGTTATACATATGTTTT+GGG | + | chr8.3:24097678-24097697 | MS.gene90522:intron | 25.0% |
| !! | TCAGTGTTATACATATGTTT+TGG | + | chr8.3:24097677-24097696 | MS.gene90522:intron | 25.0% |
| !!! | ATATAAGTGGTTTAGTCTTA+GGG | - | chr8.3:24097324-24097343 | None:intergenic | 25.0% |
| !!! | TTTTGAAGAGAAATCTATGA+GGG | + | chr8.3:24097592-24097611 | MS.gene90522:intron | 25.0% |
| AAAACTATACATCGCATTTG+AGG | + | chr8.3:24097421-24097440 | MS.gene90522:CDS | 30.0% | |
| AAACACTATGAGAAAACCAT+GGG | + | chr8.3:24097524-24097543 | MS.gene90522:CDS | 30.0% | |
| AGAAAGGATTTATCATTAGG+GGG | + | chr8.3:24097873-24097892 | MS.gene90522:intron | 30.0% | |
| AGAGGAGAAATATTGATATC+TGG | + | chr8.3:24098922-24098941 | MS.gene90522:intron | 30.0% | |
| AGTTCTTGTCAGAATATAAG+TGG | - | chr8.3:24097337-24097356 | None:intergenic | 30.0% | |
| ATAGTATAGAAAAAGCTGTG+AGG | + | chr8.3:24098137-24098156 | MS.gene90522:intron | 30.0% | |
| GAATAATGATACCGCAATTT+CGG | - | chr8.3:24098692-24098711 | None:intergenic | 30.0% | |
| GAGGAGAAATATTGATATCT+GGG | + | chr8.3:24098923-24098942 | MS.gene90522:intron | 30.0% | |
| GCTTAAAATCATTACTTGTG+GGG | - | chr8.3:24097903-24097922 | None:intergenic | 30.0% | |
| GGAATGAAATGAAGTTTCAA+TGG | - | chr8.3:24096882-24096901 | None:intergenic | 30.0% | |
| GGCTTAAAATCATTACTTGT+GGG | - | chr8.3:24097904-24097923 | None:intergenic | 30.0% | |
| GTAAACCGTAATTAAACTTG+TGG | - | chr8.3:24098521-24098540 | None:intergenic | 30.0% | |
| GTGATAGAATGAGGAAAATT+TGG | - | chr8.3:24097383-24097402 | None:intergenic | 30.0% | |
| GTGTAAAACAAAACTGCAAA+GGG | - | chr8.3:24098483-24098502 | None:intergenic | 30.0% | |
| TCTCACCACAAGTTTAATTA+CGG | + | chr8.3:24098513-24098532 | MS.gene90522:intron | 30.0% | |
| TGGCTTAAAATCATTACTTG+TGG | - | chr8.3:24097905-24097924 | None:intergenic | 30.0% | |
| TGTGTAAAACAAAACTGCAA+AGG | - | chr8.3:24098484-24098503 | None:intergenic | 30.0% | |
| TGTTAGTGAAATCAGATAGT+AGG | - | chr8.3:24098591-24098610 | None:intergenic | 30.0% | |
| TTTGAAGAGAAATCTATGAG+GGG | + | chr8.3:24097593-24097612 | MS.gene90522:intron | 30.0% | |
| TTTGAATCCTCACTTAGAAT+CGG | - | chr8.3:24098763-24098782 | None:intergenic | 30.0% | |
| ! | AGAGAGATTTGGTAAAGAAA+TGG | - | chr8.3:24097004-24097023 | None:intergenic | 30.0% |
| ! | GAGAGATTTGGTAAAGAAAT+GGG | - | chr8.3:24097003-24097022 | None:intergenic | 30.0% |
| ! | TCAAATGCGATGTATAGTTT+TGG | - | chr8.3:24097422-24097441 | None:intergenic | 30.0% |
| !! | AATCAGTGAATAATGGGTAT+TGG | + | chr8.3:24098726-24098745 | MS.gene90522:intron | 30.0% |
| !! | CTTTTGAAGAGAAATCTATG+AGG | + | chr8.3:24097591-24097610 | MS.gene90522:intron | 30.0% |
| !!! | CTTTTAATTTGCAGCAATGA+AGG | + | chr8.3:24098977-24098996 | MS.gene90522:intron | 30.0% |
| AAAGAAAAGTGGTTGCCTAA+AGG | + | chr8.3:24097824-24097843 | MS.gene90522:intron | 35.0% | |
| AACAACTTTGCTGAACTTGA+TGG | + | chr8.3:24097488-24097507 | MS.gene90522:CDS | 35.0% | |
| ATATGACCAGGTGATAGAAA+TGG | - | chr8.3:24096903-24096922 | None:intergenic | 35.0% | |
| ATTCAGGTCACGAATTTGTA+TGG | + | chr8.3:24097756-24097775 | MS.gene90522:intron | 35.0% | |
| CAAACACTATGAGAAAACCA+TGG | + | chr8.3:24097523-24097542 | MS.gene90522:CDS | 35.0% | |
| CATTGCACCTTTACATATCT+TGG | - | chr8.3:24097141-24097160 | None:intergenic | 35.0% | |
| GAAAAAAGATGAGAGTGAAG+AGG | + | chr8.3:24097799-24097818 | MS.gene90522:intron | 35.0% | |
| GTCGTCTCATAACAATTTGT+TGG | + | chr8.3:24098252-24098271 | MS.gene90522:intron | 35.0% | |
| TACTGTAAAGAGGAAGAATG+CGG | - | chr8.3:24097288-24097307 | None:intergenic | 35.0% | |
| TATACATCGCATTTGAGGAA+AGG | + | chr8.3:24097426-24097445 | MS.gene90522:CDS | 35.0% | |
| TGGTCAAGTCATTAATCCAA+GGG | - | chr8.3:24097235-24097254 | None:intergenic | 35.0% | |
| TGGTCTGTACATGGTTATAA+AGG | + | chr8.3:24098091-24098110 | MS.gene90522:intron | 35.0% | |
| TTCAGGTCACGAATTTGTAT+GGG | + | chr8.3:24097757-24097776 | MS.gene90522:intron | 35.0% | |
| TTCATTCCATTTCTATCACC+TGG | + | chr8.3:24096894-24096913 | MS.gene90522:CDS | 35.0% | |
| TTCTCCACGAATTCTCTAAT+GGG | - | chr8.3:24097176-24097195 | None:intergenic | 35.0% | |
| TTGGTCAAGTCATTAATCCA+AGG | - | chr8.3:24097236-24097255 | None:intergenic | 35.0% | |
| TTTCTCTCTTCGAATCCTTT+AGG | - | chr8.3:24097842-24097861 | None:intergenic | 35.0% | |
| ! | AAAATGGTGTTGGAGTTGAA+CGG | + | chr8.3:24096856-24096875 | MS.gene90522:CDS | 35.0% |
| ! | ACAATTTTTCCGTTCAGTGA+CGG | - | chr8.3:24098368-24098387 | None:intergenic | 35.0% |
| ! | ATGAAGGCAATACGTCATTT+TGG | + | chr8.3:24098993-24099012 | MS.gene90522:CDS | 35.0% |
| ! | GTTTTGCGAATAAGACAAGT+TGG | - | chr8.3:24097572-24097591 | None:intergenic | 35.0% |
| ! | TAGTCTTAGGGATTCTATGA+GGG | - | chr8.3:24097312-24097331 | None:intergenic | 35.0% |
| ! | TTTTAGTCTCTCCGAAATTG+CGG | + | chr8.3:24098678-24098697 | MS.gene90522:intron | 35.0% |
| !! | TTAGTCTTAGGGATTCTATG+AGG | - | chr8.3:24097313-24097332 | None:intergenic | 35.0% |
| !! | TTATGAGTCCCTTACTTTTG+CGG | - | chr8.3:24097466-24097485 | None:intergenic | 35.0% |
| !!! | GTATAGTTTTGGTGTTGTTG+AGG | - | chr8.3:24097411-24097430 | None:intergenic | 35.0% |
| !!! | TCTTTTTTCCCTTTCTTCTC+AGG | - | chr8.3:24097788-24097807 | None:intergenic | 35.0% |
| !!! | TTTTGGTGTTGTTGAGGAAA+AGG | - | chr8.3:24097405-24097424 | None:intergenic | 35.0% |
| AAAAGCTGTGAGGAGATTGA+TGG | + | chr8.3:24098147-24098166 | MS.gene90522:intron | 40.0% | |
| AACAACTTTACGAGATTGCG+AGG | + | chr8.3:24097723-24097742 | MS.gene90522:intron | 40.0% | |
| AAGGATTTATCATTAGGGGG+TGG | + | chr8.3:24097876-24097895 | MS.gene90522:intron | 40.0% | |
| ACAACTTTACGAGATTGCGA+GGG | + | chr8.3:24097724-24097743 | MS.gene90522:intron | 40.0% | |
| ACCATGGCCAAGATATGTAA+AGG | + | chr8.3:24097131-24097150 | MS.gene90522:CDS | 40.0% | |
| ACCTGGTCATATGATTCCTT+TGG | + | chr8.3:24096911-24096930 | MS.gene90522:CDS | 40.0% | |
| ACCTTTACATATCTTGGCCA+TGG | - | chr8.3:24097135-24097154 | None:intergenic | 40.0% | |
| AGGATTTATCATTAGGGGGT+GGG | + | chr8.3:24097877-24097896 | MS.gene90522:intron | 40.0% | |
| ATAACTGTTGTGCGAAGGAT+TGG | + | chr8.3:24098046-24098065 | MS.gene90522:intron | 40.0% | |
| ATTTGAGGAAAGGATGCTTG+AGG | + | chr8.3:24097436-24097455 | MS.gene90522:CDS | 40.0% | |
| CATTAGAGAATTCGTGGAGA+AGG | + | chr8.3:24097175-24097194 | MS.gene90522:CDS | 40.0% | |
| CCTGGTCATATGATTCCTTT+GGG | + | chr8.3:24096912-24096931 | MS.gene90522:CDS | 40.0% | |
| CTATGAGGGATACTGTAAAG+AGG | - | chr8.3:24097298-24097317 | None:intergenic | 40.0% | |
| CTTCTCCACGAATTCTCTAA+TGG | - | chr8.3:24097177-24097196 | None:intergenic | 40.0% | |
| GAGGAAAAGGTGATAGAATG+AGG | - | chr8.3:24097392-24097411 | None:intergenic | 40.0% | |
| GTGAAGAGGAGAAAGAAAAG+TGG | + | chr8.3:24097813-24097832 | MS.gene90522:intron | 40.0% | |
| TAACTGTTGTGCGAAGGATT+GGG | + | chr8.3:24098047-24098066 | MS.gene90522:intron | 40.0% | |
| TGAACCCATTAGAGAATTCG+TGG | + | chr8.3:24097169-24097188 | MS.gene90522:CDS | 40.0% | |
| TGAGAAAACCATGGGTAACA+AGG | + | chr8.3:24097532-24097551 | MS.gene90522:intron | 40.0% | |
| TTTGGTAAAGAAATGGGCGT+TGG | - | chr8.3:24096997-24097016 | None:intergenic | 40.0% | |
| ! | AATCCAAGGGTATACACAGT+CGG | - | chr8.3:24097222-24097241 | None:intergenic | 40.0% |
| ! | CAATTTTTCCGTTCAGTGAC+GGG | - | chr8.3:24098367-24098386 | None:intergenic | 40.0% |
| !! | ATTCTCTAATGGGTTCATGG+AGG | - | chr8.3:24097166-24097185 | None:intergenic | 40.0% |
| !! | CGAATTCTCTAATGGGTTCA+TGG | - | chr8.3:24097169-24097188 | None:intergenic | 40.0% |
| !! | GGCAATACGTCATTTTGGTA+TGG | + | chr8.3:24098998-24099017 | MS.gene90522:CDS | 40.0% |
| AAACCATGGGTAACAAGGCT+TGG | + | chr8.3:24097537-24097556 | MS.gene90522:intron | 45.0% | |
| AAAGAGGAAGAATGCGGTGA+AGG | - | chr8.3:24097282-24097301 | None:intergenic | 45.0% | |
| AAAGCTGCTATGTCACCCAA+AGG | - | chr8.3:24096930-24096949 | None:intergenic | 45.0% | |
| AACTGTTGTGCGAAGGATTG+GGG | + | chr8.3:24098048-24098067 | MS.gene90522:intron | 45.0% | |
| ACACATGCTGTTGAAGAAGG+TGG | + | chr8.3:24098229-24098248 | MS.gene90522:intron | 45.0% | |
| AGCTGATAACTGTTGTGCGA+AGG | + | chr8.3:24098041-24098060 | MS.gene90522:intron | 45.0% | |
| ATCGATGGAGGAGAGAGATT+TGG | - | chr8.3:24097015-24097034 | None:intergenic | 45.0% | |
| CAACTTTACGAGATTGCGAG+GGG | + | chr8.3:24097725-24097744 | MS.gene90522:intron | 45.0% | |
| CACATGCTGTTGAAGAAGGT+GGG | + | chr8.3:24098230-24098249 | MS.gene90522:intron | 45.0% | |
| CCCAAAGGAATCATATGACC+AGG | - | chr8.3:24096915-24096934 | None:intergenic | 45.0% | |
| GACAATGATTCAACACCGTC+GGG | - | chr8.3:24097092-24097111 | None:intergenic | 45.0% | |
| GAGGCAATCCGCAAAAGTAA+GGG | + | chr8.3:24097455-24097474 | MS.gene90522:CDS | 45.0% | |
| GCGAGGGGAATAGAAAATTC+AGG | + | chr8.3:24097740-24097759 | MS.gene90522:intron | 45.0% | |
| GCTACACATGCTGTTGAAGA+AGG | + | chr8.3:24098226-24098245 | MS.gene90522:intron | 45.0% | |
| GGAAAAGAGAAAGTGGTGAG+TGG | + | chr8.3:24098112-24098131 | MS.gene90522:intron | 45.0% | |
| GGACAATGATTCAACACCGT+CGG | - | chr8.3:24097093-24097112 | None:intergenic | 45.0% | |
| GGGTTGTTCCTGAGAAGAAA+GGG | + | chr8.3:24097777-24097796 | MS.gene90522:intron | 45.0% | |
| GGTGCATTCATGACACATTG+CGG | + | chr8.3:24097935-24097954 | MS.gene90522:intron | 45.0% | |
| GGTGGAGATATGAGGCTTAT+TGG | - | chr8.3:24097255-24097274 | None:intergenic | 45.0% | |
| GTGCATTCATGACACATTGC+GGG | + | chr8.3:24097936-24097955 | MS.gene90522:intron | 45.0% | |
| TAGAACTGTTCTCCTTGCAC+AGG | - | chr8.3:24098013-24098032 | None:intergenic | 45.0% | |
| TATGAGGGGAAATGAGAGTG+TGG | + | chr8.3:24097607-24097626 | MS.gene90522:intron | 45.0% | |
| TGAGGCAATCCGCAAAAGTA+AGG | + | chr8.3:24097454-24097473 | MS.gene90522:CDS | 45.0% | |
| TGCTCAAGAGTTTGGGAGAA+AGG | + | chr8.3:24098204-24098223 | MS.gene90522:intron | 45.0% | |
| TGGGTTGTTCCTGAGAAGAA+AGG | + | chr8.3:24097776-24097795 | MS.gene90522:intron | 45.0% | |
| ! | AAGGCAATGGTGGAGATATG+AGG | - | chr8.3:24097263-24097282 | None:intergenic | 45.0% |
| ! | ATATCTTGGCCATGGTGTCA+GGG | - | chr8.3:24097127-24097146 | None:intergenic | 45.0% |
| ! | ATTTTAAGCCACGCTGCTGT+GGG | + | chr8.3:24097914-24097933 | MS.gene90522:intron | 45.0% |
| ! | GAAGTGTCCGATTCTAAGTG+AGG | + | chr8.3:24098753-24098772 | MS.gene90522:intron | 45.0% |
| ! | GTTTGAAACCCGTCACTGAA+CGG | + | chr8.3:24098356-24098375 | MS.gene90522:intron | 45.0% |
| ! | TGGTGATGATCGTGACTTGT+TGG | - | chr8.3:24096968-24096987 | None:intergenic | 45.0% |
| !! | GTAAAGAAATGGGCGTTGGA+GGG | - | chr8.3:24096993-24097012 | None:intergenic | 45.0% |
| !! | AATTTAGTATTTAAAAAAAT+AGG | - | chr8.3:24098459-24098478 | None:intergenic | 5.0% |
| AGACGACGTGCTCAAGAGTT+TGG | + | chr8.3:24098196-24098215 | MS.gene90522:intron | 50.0% | |
| ATGGTAGAGGCTGTTAGTGC+AGG | + | chr8.3:24097968-24097987 | MS.gene90522:intron | 50.0% | |
| CAACAAGTCGATCTTCCCGA+CGG | + | chr8.3:24097074-24097093 | MS.gene90522:CDS | 50.0% | |
| CAGGGATTCCAATGATCACG+TGG | + | chr8.3:24097987-24098006 | MS.gene90522:intron | 50.0% | |
| CAGTCGGCAATGATGTAGTC+AGG | - | chr8.3:24097206-24097225 | None:intergenic | 50.0% | |
| CATATCTTGGCCATGGTGTC+AGG | - | chr8.3:24097128-24097147 | None:intergenic | 50.0% | |
| GAAGAATGCGGTGAAGGCAA+TGG | - | chr8.3:24097276-24097295 | None:intergenic | 50.0% | |
| GACGACGTGCTCAAGAGTTT+GGG | + | chr8.3:24098197-24098216 | MS.gene90522:intron | 50.0% | |
| GAGGAAAAACGGATCGATGG+AGG | - | chr8.3:24097027-24097046 | None:intergenic | 50.0% | |
| GCAACAGAGTGGTCTGTACA+TGG | + | chr8.3:24098082-24098101 | MS.gene90522:intron | 50.0% | |
| GGTAACAAGGCTTGGCATCT+TGG | + | chr8.3:24097545-24097564 | MS.gene90522:intron | 50.0% | |
| GTGTGAAGGCGGAGGAAAAA+CGG | - | chr8.3:24097038-24097057 | None:intergenic | 50.0% | |
| TGCACTAACAGCCTCTACCA+TGG | - | chr8.3:24097969-24097988 | None:intergenic | 50.0% | |
| TGGTAGAGGCTGTTAGTGCA+GGG | + | chr8.3:24097969-24097988 | MS.gene90522:intron | 50.0% | |
| TTGTTGGGAGGGGAAGTCAA+CGG | - | chr8.3:24097060-24097079 | None:intergenic | 50.0% | |
| ! | GATTTTAAGCCACGCTGCTG+TGG | + | chr8.3:24097913-24097932 | MS.gene90522:intron | 50.0% |
| ! | GTGAGGAGATTGATGGACGA+TGG | + | chr8.3:24098154-24098173 | MS.gene90522:intron | 50.0% |
| ! | TTGCCGACTGTGTATACCCT+TGG | + | chr8.3:24097216-24097235 | MS.gene90522:CDS | 50.0% |
| !! | ATGCCAAGCCTTGTTACCCA+TGG | - | chr8.3:24097543-24097562 | None:intergenic | 50.0% |
| !! | GAAGATCGACTTGTTGGGAG+GGG | - | chr8.3:24097070-24097089 | None:intergenic | 50.0% |
| !! | GATCGTGACTTGTTGGCCAT+GGG | - | chr8.3:24096961-24096980 | None:intergenic | 50.0% |
| !! | GCAGCTTTGTTTGCATCCCA+TGG | + | chr8.3:24096942-24096961 | MS.gene90522:CDS | 50.0% |
| !! | GGAAGATCGACTTGTTGGGA+GGG | - | chr8.3:24097071-24097090 | None:intergenic | 50.0% |
| !! | GGTAAAGAAATGGGCGTTGG+AGG | - | chr8.3:24096994-24097013 | None:intergenic | 50.0% |
| !! | GTCGGGAAGATCGACTTGTT+GGG | - | chr8.3:24097075-24097094 | None:intergenic | 50.0% |
| !! | TGATCGTGACTTGTTGGCCA+TGG | - | chr8.3:24096962-24096981 | None:intergenic | 50.0% |
| ACATTGCGGGTCGAACTCCA+TGG | + | chr8.3:24097949-24097968 | MS.gene90522:intron | 55.0% | |
| AGGGGAAGTCAACGGTGTGA+AGG | - | chr8.3:24097052-24097071 | None:intergenic | 55.0% | |
| ATGATCACGTGGCCTGTGCA+AGG | + | chr8.3:24097998-24098017 | MS.gene90522:intron | 55.0% | |
| GAATGCGGTGAAGGCAATGG+TGG | - | chr8.3:24097273-24097292 | None:intergenic | 55.0% | |
| GCGCGCATGAGTGTCTAAGT+TGG | + | chr8.3:24097633-24097652 | MS.gene90522:intron | 55.0% | |
| GCGGAGGAAAAACGGATCGA+TGG | - | chr8.3:24097030-24097049 | None:intergenic | 55.0% | |
| GGAAGTCAACGGTGTGAAGG+CGG | - | chr8.3:24097049-24097068 | None:intergenic | 55.0% | |
| GGACGATGGCGATGAAGCTA+AGG | + | chr8.3:24098168-24098187 | MS.gene90522:intron | 55.0% | |
| TGCACAGGCCACGTGATCAT+TGG | - | chr8.3:24097998-24098017 | None:intergenic | 55.0% | |
| TGTTGTGCGAAGGATTGGGG+TGG | + | chr8.3:24098051-24098070 | MS.gene90522:intron | 55.0% | |
| !! | CGTCGGGAAGATCGACTTGT+TGG | - | chr8.3:24097076-24097095 | None:intergenic | 55.0% |
| !! | GGGAAGATCGACTTGTTGGG+AGG | - | chr8.3:24097072-24097091 | None:intergenic | 55.0% |
| AGTCAACGGTGTGAAGGCGG+AGG | - | chr8.3:24097046-24097065 | None:intergenic | 60.0% | |
| CACCGCTAACCCTGACACCA+TGG | + | chr8.3:24097115-24097134 | MS.gene90522:CDS | 60.0% | |
| CGAAGGATTGGGGTGGAGGT+GGG | + | chr8.3:24098058-24098077 | MS.gene90522:intron | 60.0% | |
| CGGGTCGAACTCCATGGTAG+AGG | + | chr8.3:24097955-24097974 | MS.gene90522:intron | 60.0% | |
| TGAATGCACCCACAGCAGCG+TGG | - | chr8.3:24097925-24097944 | None:intergenic | 60.0% | |
| TGGAGGTGGGTGCAACAGAG+TGG | + | chr8.3:24098071-24098090 | MS.gene90522:intron | 60.0% | |
| TGTGCGAAGGATTGGGGTGG+AGG | + | chr8.3:24098054-24098073 | MS.gene90522:intron | 60.0% | |
| ! | CATGGTGTCAGGGTTAGCGG+TGG | - | chr8.3:24097117-24097136 | None:intergenic | 60.0% |
| ! | GGCCATGGTGTCAGGGTTAG+CGG | - | chr8.3:24097120-24097139 | None:intergenic | 60.0% |
| !! | GAAATGGGCGTTGGAGGGAG+TGG | - | chr8.3:24096988-24097007 | None:intergenic | 60.0% |
| GCGAAGGATTGGGGTGGAGG+TGG | + | chr8.3:24098057-24098076 | MS.gene90522:intron | 65.0% | |
| ! | GGTGTCAGGGTTAGCGGTGG+AGG | - | chr8.3:24097114-24097133 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 24096852 | 24099040 | 24096852 | ID=MS.gene90522 |
| chr8.3 | mRNA | 24096852 | 24099040 | 24096852 | ID=MS.gene90522.t1;Parent=MS.gene90522 |
| chr8.3 | exon | 24096852 | 24097545 | 24096852 | ID=MS.gene90522.t1.exon1;Parent=MS.gene90522.t1 |
| chr8.3 | CDS | 24096852 | 24097545 | 24096852 | ID=cds.MS.gene90522.t1;Parent=MS.gene90522.t1 |
| chr8.3 | exon | 24098991 | 24099040 | 24098991 | ID=MS.gene90522.t1.exon2;Parent=MS.gene90522.t1 |
| chr8.3 | CDS | 24098991 | 24099040 | 24098991 | ID=cds.MS.gene90522.t1;Parent=MS.gene90522.t1 |
| Gene Sequence |
| Protein sequence |
