Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90859.t1 | XP_013470437.1 | 97.7 | 1023 | 24 | 0 | 1 | 1023 | 1 | 1023 | 0.00E+00 | 2056.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90859.t1 | Q54JE4 | 50.5 | 1001 | 455 | 7 | 43 | 1017 | 23 | 1009 | 2.2e-297 | 1023.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90859.t1 | A0A072W2L0 | 97.7 | 1023 | 24 | 0 | 1 | 1023 | 1 | 1023 | 0.0e+00 | 2056.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene012996 | MS.gene90859 | PPI |
| MS.gene90859 | MS.gene064489 | PPI |
| MS.gene90859 | MS.gene054629 | PPI |
| MS.gene48488 | MS.gene90859 | PPI |
| MS.gene38729 | MS.gene90859 | PPI |
| MS.gene029815 | MS.gene90859 | PPI |
| MS.gene055904 | MS.gene90859 | PPI |
| MS.gene24619 | MS.gene90859 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90859.t1 | MTR_1g115340 | 97.654 | 1023 | 24 | 0 | 1 | 1023 | 1 | 1023 | 0.0 | 2091 |
| MS.gene90859.t1 | MTR_7g023770 | 87.610 | 1025 | 123 | 3 | 1 | 1023 | 1 | 1023 | 0.0 | 1901 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90859.t1 | AT5G65750 | 81.489 | 1021 | 188 | 1 | 1 | 1020 | 1 | 1021 | 0.0 | 1795 |
| MS.gene90859.t1 | AT3G55410 | 81.275 | 1020 | 188 | 2 | 1 | 1020 | 1 | 1017 | 0.0 | 1788 |
| MS.gene90859.t1 | AT3G55410 | 81.275 | 1020 | 188 | 2 | 1 | 1020 | 1 | 1017 | 0.0 | 1788 |
Find 277 sgRNAs with CRISPR-Local
Find 385 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCTGAGTTTGGTGTTCT+TGG | 0.092183 | 1.4:+87507301 | MS.gene90859:CDS |
| GAGTTAAACCTGGCCCTTTA+TGG | 0.130938 | 1.4:+87505066 | MS.gene90859:CDS |
| ATGAAATATGGGAGCGTTTA+AGG | 0.158377 | 1.4:-87505982 | None:intergenic |
| TCCACCTCTCCGAGAATTTC+AGG | 0.189628 | 1.4:+87504928 | MS.gene90859:CDS |
| ATCACCATTGACATGAAATA+TGG | 0.223030 | 1.4:-87505994 | None:intergenic |
| TTACTGCGAAGCAGGTTCTT+AGG | 0.225546 | 1.4:-87508113 | None:intergenic |
| CTAGCTCAGTTTGCTCCTTC+TGG | 0.246269 | 1.4:-87509339 | None:intergenic |
| CTTACCGACAATTTCTTAGA+TGG | 0.255162 | 1.4:+87504799 | MS.gene90859:CDS |
| CTTCCCCTGTCTCGATCATT+TGG | 0.259241 | 1.4:-87506672 | None:intergenic |
| CAACATTTGAGTGATTATTT+TGG | 0.260255 | 1.4:-87508229 | None:intergenic |
| GTCCCACCTGTAGTATAATT+TGG | 0.264600 | 1.4:-87505870 | None:intergenic |
| TAGAGGAAGATTGAATGTTT+TGG | 0.269599 | 1.4:+87505503 | MS.gene90859:CDS |
| TGCAGCTCACTTTCTGAGTT+TGG | 0.287479 | 1.4:+87507292 | MS.gene90859:intron |
| TGGGACGAGCAGTGTCTATT+TGG | 0.292842 | 1.4:+87504819 | MS.gene90859:CDS |
| AACAAATTCAGGAATGTAAT+TGG | 0.293090 | 1.4:+87507903 | MS.gene90859:CDS |
| CACACAGCCTAAAATGTATA+AGG | 0.293960 | 1.4:+87506145 | MS.gene90859:CDS |
| ATAACTTCCATGAAGTCTTT+AGG | 0.296416 | 1.4:+87509238 | MS.gene90859:CDS |
| AATTTCAGGTCAAACGATTC+AGG | 0.296807 | 1.4:+87504942 | MS.gene90859:CDS |
| GAGATTGGCTTTCAGCATAT+TGG | 0.308233 | 1.4:+87506419 | MS.gene90859:CDS |
| GATTTATCAGAAGAAACTTT+TGG | 0.310187 | 1.4:+87506291 | MS.gene90859:CDS |
| CTGACCGTGACAAATGTAAT+TGG | 0.312341 | 1.4:+87505247 | MS.gene90859:CDS |
| GAGAAGAATACATTTGTCTT+TGG | 0.315837 | 1.4:+87505671 | MS.gene90859:CDS |
| CTTCAGGAACTTTGTGGGTC+AGG | 0.319826 | 1.4:+87504903 | MS.gene90859:CDS |
| CCCTCTGCAGCCACGGCTAC+TGG | 0.320205 | 1.4:+87509301 | MS.gene90859:CDS |
| AATCTCCCACTTGAATGCTC+TGG | 0.328544 | 1.4:-87507505 | None:intergenic |
| ATCCGAATTCATTGGTGATC+TGG | 0.328825 | 1.4:+87507350 | MS.gene90859:CDS |
| TACAGGTGCAGCTTGTGCTT+TGG | 0.337749 | 1.4:-87504752 | None:intergenic |
| CACTTGAATGCTCTGGGCCC+TGG | 0.340908 | 1.4:-87507498 | None:intergenic |
| GGACATCAGCAAAGAGGTTT+GGG | 0.341859 | 1.4:+87505385 | MS.gene90859:CDS |
| AGTTAAACCTGGCCCTTTAT+GGG | 0.344083 | 1.4:+87505067 | MS.gene90859:CDS |
| TGGTGTTCTTGGATTTGAAT+TGG | 0.345720 | 1.4:+87507312 | MS.gene90859:CDS |
| TCCCCTACCTAAAGACTTCA+TGG | 0.348179 | 1.4:-87509245 | None:intergenic |
| TCCATCTCAGGAATAATATA+AGG | 0.352966 | 1.4:-87507866 | None:intergenic |
| TACTCTTCGGAAACAAATTC+AGG | 0.356657 | 1.4:+87507892 | MS.gene90859:CDS |
| GTGAGAGCATACCAGGTTAA+TGG | 0.357984 | 1.4:+87504988 | MS.gene90859:CDS |
| CCTATCAATTTCCCTTACTA+AGG | 0.361544 | 1.4:+87509385 | MS.gene90859:CDS |
| TATGGGAGCGTTTAAGGCTT+TGG | 0.362307 | 1.4:-87505976 | None:intergenic |
| CAAATGTTGAGGAGGGTATC+AGG | 0.366351 | 1.4:+87508243 | MS.gene90859:CDS |
| GGTGTTCTTGGATTTGAATT+GGG | 0.368751 | 1.4:+87507313 | MS.gene90859:CDS |
| CAGCCTCGGTGAACCCATAA+AGG | 0.369387 | 1.4:-87505080 | None:intergenic |
| GGATGGTATAGAGCTGTTTC+CGG | 0.371801 | 1.4:+87504613 | MS.gene90859:CDS |
| GTGATCTGGGAGGCACAATT+TGG | 0.372428 | 1.4:+87507364 | MS.gene90859:CDS |
| TGAAAGTTTCTACTTGTTGA+TGG | 0.374060 | 1.4:-87504712 | None:intergenic |
| TACTGCGAAGCAGGTTCTTA+GGG | 0.375309 | 1.4:-87508112 | None:intergenic |
| CAGTAAACATCTCTTCGTTC+TGG | 0.382072 | 1.4:-87506870 | None:intergenic |
| TTAGTATGTTACCGTCGATT+TGG | 0.382663 | 1.4:+87506095 | MS.gene90859:CDS |
| CCTTAGTAAGGGAAATTGAT+AGG | 0.383594 | 1.4:-87509385 | None:intergenic |
| ATCGTTTGACCTGAAATTCT+CGG | 0.383652 | 1.4:-87504937 | None:intergenic |
| TGGGTTCACCGAGGCTGATC+TGG | 0.383879 | 1.4:+87505086 | MS.gene90859:CDS |
| CTATAGTTGCAGAGGTTGTT+TGG | 0.384165 | 1.4:+87509161 | MS.gene90859:intron |
| CTCGCCCTGTGCCGCTTACT+AGG | 0.384213 | 1.4:+87504776 | MS.gene90859:CDS |
| TCAAACATTTCTTTCATTCC+AGG | 0.384857 | 1.4:-87505432 | None:intergenic |
| CAATTTCTTCAGGAACTTTG+TGG | 0.394080 | 1.4:+87504897 | MS.gene90859:CDS |
| GAGATTGGAACGCTTTCTTC+AGG | 0.395357 | 1.4:+87507522 | MS.gene90859:CDS |
| GTCTGGAAGATAATCTTTGC+TGG | 0.396814 | 1.4:-87506392 | None:intergenic |
| AATTGATAGGTTCACTTTGA+AGG | 0.399133 | 1.4:-87509372 | None:intergenic |
| AAAGCCAAGCTAGATCCTTT+AGG | 0.399215 | 1.4:+87505018 | MS.gene90859:CDS |
| AGGGCCAGGTTTAACTCATC+AGG | 0.400300 | 1.4:-87505060 | None:intergenic |
| TCCCAGATCACCAATGAATT+CGG | 0.400788 | 1.4:-87507352 | None:intergenic |
| ATCTCCCACTTGAATGCTCT+GGG | 0.407758 | 1.4:-87507504 | None:intergenic |
| TGGACATCAGCAAAGAGGTT+TGG | 0.409276 | 1.4:+87505384 | MS.gene90859:CDS |
| TTTGACCGAGCATCTGATCT+TGG | 0.409515 | 1.4:+87505450 | MS.gene90859:CDS |
| ATTTGAATTGGGTTACTCAA+TGG | 0.410105 | 1.4:+87507324 | MS.gene90859:CDS |
| AGTCTTGGGACAATTTCTTC+AGG | 0.414759 | 1.4:+87504887 | MS.gene90859:CDS |
| TTCATAAACTACGCCTTGTC+CGG | 0.417972 | 1.4:-87505826 | None:intergenic |
| TTAGGGGTATGGAATATGTC+TGG | 0.419990 | 1.4:+87505123 | MS.gene90859:CDS |
| AGATGTTTACTGTTAGCAAT+AGG | 0.422784 | 1.4:+87506881 | MS.gene90859:CDS |
| ACATTACAATGAGAGGTTTA+CGG | 0.423106 | 1.4:-87508088 | None:intergenic |
| CTTTCATGTGGCCATTAACC+TGG | 0.425935 | 1.4:-87504999 | None:intergenic |
| CGAGAGCTGATGGATGGTTT+CGG | 0.426582 | 1.4:-87506267 | None:intergenic |
| AGAGCATTCAAGTGGGAGAT+TGG | 0.427008 | 1.4:+87507507 | MS.gene90859:CDS |
| GGTAACCATGTTCGTTTAAG+TGG | 0.428951 | 1.4:+87506748 | MS.gene90859:CDS |
| TGGCTTTCAGCATATTGGTC+TGG | 0.429736 | 1.4:+87506424 | MS.gene90859:CDS |
| TTCCCCTGTCTCGATCATTT+GGG | 0.430139 | 1.4:-87506671 | None:intergenic |
| AATGGAAAATCCGAATTCAT+TGG | 0.433074 | 1.4:+87507342 | MS.gene90859:CDS |
| CAAAGAGGTTTGGGCTTGAA+GGG | 0.434029 | 1.4:+87505394 | MS.gene90859:CDS |
| GATGAAGTCGGGCTCTATAC+AGG | 0.434570 | 1.4:+87505591 | MS.gene90859:CDS |
| GCAAAGAGGTTTGGGCTTGA+AGG | 0.434740 | 1.4:+87505393 | MS.gene90859:CDS |
| CAAGACTCGTCTACACTGTT+TGG | 0.435583 | 1.4:-87504871 | None:intergenic |
| TTCGCCACATTGATAGTTGA+AGG | 0.435918 | 1.4:+87506727 | MS.gene90859:CDS |
| AGCGGCACAGGGCGAGGTAC+AGG | 0.437109 | 1.4:-87504769 | None:intergenic |
| CGACTGAATTGTGTGGCCGC+AGG | 0.439536 | 1.4:-87505291 | None:intergenic |
| TCCACATGGTTATGATGGCC+AGG | 0.440622 | 1.4:+87507480 | MS.gene90859:CDS |
| TTGCGAAGATCTGCCTGACT+TGG | 0.442621 | 1.4:-87505937 | None:intergenic |
| GTAGTTCATGATCAGACAAA+TGG | 0.444012 | 1.4:+87506811 | MS.gene90859:CDS |
| AAGCTTATTGTGGAAGCATT+GGG | 0.444596 | 1.4:+87505205 | MS.gene90859:CDS |
| ATGAAGATCCACTTCGATAG+AGG | 0.444811 | 1.4:-87504663 | None:intergenic |
| CTAAGTGGCTGCGTCAGGCC+GGG | 0.445956 | 1.4:+87507443 | MS.gene90859:CDS |
| GAAAGCCAATCTCTTCTGTC+TGG | 0.448363 | 1.4:-87506409 | None:intergenic |
| TTCCATGAAGTCTTTAGGTA+GGG | 0.450277 | 1.4:+87509243 | MS.gene90859:CDS |
| GCAGTAAACCCACTTGTTGT+TGG | 0.450461 | 1.4:+87505717 | MS.gene90859:CDS |
| CAAGCTTATTGTGGAAGCAT+TGG | 0.450565 | 1.4:+87505204 | MS.gene90859:CDS |
| TCTCGTTGGACAAGGTCATA+AGG | 0.451096 | 1.4:-87508499 | None:intergenic |
| CAATTACATTTGTCACGGTC+AGG | 0.451252 | 1.4:-87505246 | None:intergenic |
| TGTCAAAACCAGGGTGTCCT+TGG | 0.453576 | 1.4:-87508172 | None:intergenic |
| TCTAAGTGGCTGCGTCAGGC+CGG | 0.453645 | 1.4:+87507442 | MS.gene90859:CDS |
| AAGAATACATTTGTCTTTGG+TGG | 0.456321 | 1.4:+87505674 | MS.gene90859:CDS |
| TCGCAAAATATCTGACGAAT+CGG | 0.457235 | 1.4:-87505543 | None:intergenic |
| AATTGAATGCTTCGCTATGC+CGG | 0.457970 | 1.4:-87504632 | None:intergenic |
| TCCGAATTCATTGGTGATCT+GGG | 0.460218 | 1.4:+87507351 | MS.gene90859:CDS |
| ATCTTCCAGACAGAAGAGAT+TGG | 0.462055 | 1.4:+87506404 | MS.gene90859:CDS |
| TAGTTCATGATCAGACAAAT+GGG | 0.462248 | 1.4:+87506812 | MS.gene90859:CDS |
| TGCAAGCCTTACTGCGAAGC+AGG | 0.462792 | 1.4:-87508121 | None:intergenic |
| TGAGTCTAAGTGGCTGCGTC+AGG | 0.463047 | 1.4:+87507438 | MS.gene90859:CDS |
| TCACTGCTTTGTGAGGAGTA+AGG | 0.464401 | 1.4:-87506627 | None:intergenic |
| GTTACTTGTGAGAGCATACC+AGG | 0.464914 | 1.4:+87504981 | MS.gene90859:CDS |
| CAAACAGTGTAGACGAGTCT+TGG | 0.465400 | 1.4:+87504872 | MS.gene90859:CDS |
| CGGATACGTGAAAGCTGCTC+AGG | 0.469572 | 1.4:-87506457 | None:intergenic |
| TATATGCAGAACCCTTAGTA+AGG | 0.469759 | 1.4:-87509397 | None:intergenic |
| GTCGGGCTCTATACAGGAAC+TGG | 0.469840 | 1.4:+87505597 | MS.gene90859:CDS |
| GACTGAATTGTGTGGCCGCA+GGG | 0.471613 | 1.4:-87505290 | None:intergenic |
| AATTTCTTCAGGAACTTTGT+GGG | 0.472186 | 1.4:+87504898 | MS.gene90859:CDS |
| TAAGAACCTGCTTCGCAGTA+AGG | 0.475573 | 1.4:+87508115 | MS.gene90859:CDS |
| GTTCCTTGTTTGTCAAAACC+AGG | 0.475592 | 1.4:-87508182 | None:intergenic |
| GCCGTGTCAAAATAGACCTA+AGG | 0.476839 | 1.4:-87505176 | None:intergenic |
| CCTCTTTGCTGATGTCCACT+TGG | 0.477260 | 1.4:-87505379 | None:intergenic |
| TTACGTTCTTCAAGACCTAA+AGG | 0.477287 | 1.4:-87505033 | None:intergenic |
| TCCTTATATTATTCCTGAGA+TGG | 0.477593 | 1.4:+87507865 | MS.gene90859:CDS |
| GCTCTTCCAAATTATACTAC+AGG | 0.479583 | 1.4:+87505864 | MS.gene90859:CDS |
| CCATGTTCGTTTAAGTGGCC+AGG | 0.480301 | 1.4:+87506753 | MS.gene90859:CDS |
| GGAGTCGAGAACATAGTAAT+GGG | 0.480568 | 1.4:+87505471 | MS.gene90859:CDS |
| ATTCTTCTCCCGCCCCTGGT+TGG | 0.486667 | 1.4:-87505657 | None:intergenic |
| GTAAGCCTAGTAAGCGGCAC+AGG | 0.488540 | 1.4:-87504781 | None:intergenic |
| AAGGTTCATCAATCTCATTA+TGG | 0.488600 | 1.4:-87506118 | None:intergenic |
| TCACCATTGACATGAAATAT+GGG | 0.491053 | 1.4:-87505993 | None:intergenic |
| ACGTTCCTCTTTCAACGTCC+TGG | 0.491811 | 1.4:-87506771 | None:intergenic |
| GGTCTACCAGTGGATGAAGT+CGG | 0.492099 | 1.4:+87505579 | MS.gene90859:CDS |
| GAACCTGTCGCCGTAAAACA+TGG | 0.494360 | 1.4:-87507961 | None:intergenic |
| GTGTATCCACCCATGTTCAT+TGG | 0.494570 | 1.4:-87509196 | None:intergenic |
| GTCTACCAGTGGATGAAGTC+GGG | 0.494655 | 1.4:+87505580 | MS.gene90859:CDS |
| ACCAGTAGCCGTGGCTGCAG+AGG | 0.494701 | 1.4:-87509302 | None:intergenic |
| ATGTATTCTTCTCCCGCCCC+TGG | 0.495384 | 1.4:-87505661 | None:intergenic |
| CGTGCCCAAATGATCGAGAC+AGG | 0.496128 | 1.4:+87506667 | MS.gene90859:CDS |
| AATCTTGTGCAGGGTGAAGC+CGG | 0.496982 | 1.4:+87506558 | MS.gene90859:intron |
| CTTTGCTGATGTCCACTTGG+TGG | 0.499560 | 1.4:-87505376 | None:intergenic |
| ATCGTCCGGTGCAGACCCTT+AGG | 0.501099 | 1.4:+87505160 | MS.gene90859:CDS |
| GTGACAAATGTAATTGGCTA+AGG | 0.501832 | 1.4:+87505253 | MS.gene90859:CDS |
| ATTGATAGGTTCACTTTGAA+GGG | 0.501911 | 1.4:-87509371 | None:intergenic |
| CTCGTTGTGTTACTTCCACA+TGG | 0.503101 | 1.4:+87507466 | MS.gene90859:CDS |
| CAGCAGCAAGTTCACATACA+TGG | 0.503369 | 1.4:-87506034 | None:intergenic |
| TTTACAACTGATCCCAAGTC+AGG | 0.506242 | 1.4:+87505924 | MS.gene90859:CDS |
| TGATAAATCTCGAGAGCTGA+TGG | 0.509940 | 1.4:-87506277 | None:intergenic |
| CTGAGATGGATCCTACTCTT+CGG | 0.512265 | 1.4:+87507879 | MS.gene90859:CDS |
| AAACAGTGTAGACGAGTCTT+GGG | 0.514129 | 1.4:+87504873 | MS.gene90859:CDS |
| TGGAGGAGCTTCAAAGAGCA+TGG | 0.514351 | 1.4:+87504839 | MS.gene90859:CDS |
| GCTCCCATATTTCATGTCAA+TGG | 0.514905 | 1.4:+87505990 | MS.gene90859:CDS |
| CTAGTAAGCGGCACAGGGCG+AGG | 0.515278 | 1.4:-87504775 | None:intergenic |
| CGTTCTGGTTCATTATCACA+TGG | 0.516335 | 1.4:-87506855 | None:intergenic |
| AGTCGACAACCACATCTGAA+TGG | 0.516398 | 1.4:-87506073 | None:intergenic |
| CGGTGAACCCATAAAGGGCC+AGG | 0.516840 | 1.4:-87505074 | None:intergenic |
| TTACCGACAATTTCTTAGAT+GGG | 0.520335 | 1.4:+87504800 | MS.gene90859:CDS |
| TCAAGAAGAGCCAATGAACA+TGG | 0.521309 | 1.4:+87509186 | MS.gene90859:CDS |
| TGAATTTGTTTCCGAAGAGT+AGG | 0.521380 | 1.4:-87507890 | None:intergenic |
| ATGTACTATACCCAGTGTTA+CGG | 0.521689 | 1.4:-87506477 | None:intergenic |
| AGACAGGGGAAGATATTGAC+TGG | 0.523628 | 1.4:+87506683 | MS.gene90859:CDS |
| CGTCCCATCTAAGAAATTGT+CGG | 0.525592 | 1.4:-87504803 | None:intergenic |
| CTATCAATTTCCCTTACTAA+GGG | 0.525720 | 1.4:+87509386 | MS.gene90859:CDS |
| AAGACCTAAAGGATCTAGCT+TGG | 0.527988 | 1.4:-87505022 | None:intergenic |
| CTCGTTGGACAAGGTCATAA+GGG | 0.530435 | 1.4:-87508498 | None:intergenic |
| ACCTGAAATTCTCGGAGAGG+TGG | 0.531196 | 1.4:-87504929 | None:intergenic |
| AGGCGTCTAATACTATGTTC+TGG | 0.532093 | 1.4:+87508263 | MS.gene90859:CDS |
| ACTTAGACTCACCACAGCTC+AGG | 0.533201 | 1.4:-87507426 | None:intergenic |
| TTACTTCCACATGGTTATGA+TGG | 0.537672 | 1.4:+87507475 | MS.gene90859:CDS |
| TGCGGCCACACAATTCAGTC+GGG | 0.537804 | 1.4:+87505293 | MS.gene90859:CDS |
| CTTCCATGAAGTCTTTAGGT+AGG | 0.539887 | 1.4:+87509242 | MS.gene90859:CDS |
| GGTTCATTATCACATGGTCA+AGG | 0.542099 | 1.4:-87506849 | None:intergenic |
| CAAAGGATGTTGCAATATGT+AGG | 0.542821 | 1.4:+87508455 | MS.gene90859:CDS |
| CGAAGAGTAGGATCCATCTC+AGG | 0.543027 | 1.4:-87507878 | None:intergenic |
| AGCCTCGGTGAACCCATAAA+GGG | 0.543896 | 1.4:-87505079 | None:intergenic |
| AGTGGCCAGGACGTTGAAAG+AGG | 0.544146 | 1.4:+87506766 | MS.gene90859:CDS |
| CCAGTAGCCGTGGCTGCAGA+GGG | 0.544674 | 1.4:-87509301 | None:intergenic |
| GTTCATTATCACATGGTCAA+GGG | 0.545495 | 1.4:-87506848 | None:intergenic |
| CTTTCACGTATCCGTAACAC+TGG | 0.547399 | 1.4:+87506466 | MS.gene90859:CDS |
| CTTCCAAATTATACTACAGG+TGG | 0.549074 | 1.4:+87505867 | MS.gene90859:CDS |
| TATGATGATGTTAAATATGT+CGG | 0.549449 | 1.4:+87509271 | MS.gene90859:CDS |
| GACGAGCAGTGTCTATTTGG+AGG | 0.549512 | 1.4:+87504822 | MS.gene90859:CDS |
| TGCGAAGATCTGCCTGACTT+GGG | 0.550686 | 1.4:-87505936 | None:intergenic |
| TTCTCTATCCAGATCAGCCT+CGG | 0.551862 | 1.4:-87505094 | None:intergenic |
| TCCATGAAGTCTTTAGGTAG+GGG | 0.553162 | 1.4:+87509244 | MS.gene90859:CDS |
| TGGAGTCGAGAACATAGTAA+TGG | 0.553334 | 1.4:+87505470 | MS.gene90859:CDS |
| TTTACTGCTTCCAAGTGACT+AGG | 0.553341 | 1.4:-87505702 | None:intergenic |
| ATGATCGACCAACCAGGGGC+GGG | 0.554266 | 1.4:+87505649 | MS.gene90859:CDS |
| TGGAAGTAACACAACGAGCC+CGG | 0.555576 | 1.4:-87507461 | None:intergenic |
| TCTGAGTTTGATGATGTCCA+AGG | 0.556376 | 1.4:+87508155 | MS.gene90859:CDS |
| TGAGCTGTGGTGAGTCTAAG+TGG | 0.558183 | 1.4:+87507428 | MS.gene90859:CDS |
| GATATCGTTTAAGCTCTCGT+TGG | 0.559043 | 1.4:-87508513 | None:intergenic |
| CACGGCTACTGGTTTCCTCA+AGG | 0.559781 | 1.4:+87509312 | MS.gene90859:CDS |
| CTTCTTATGATCGACCAACC+AGG | 0.560562 | 1.4:+87505643 | MS.gene90859:CDS |
| CTGCGGCCACACAATTCAGT+CGG | 0.560882 | 1.4:+87505292 | MS.gene90859:CDS |
| TTCCTTGTTTGTCAAAACCA+GGG | 0.561780 | 1.4:-87508181 | None:intergenic |
| TGGTGATGTTAAATATCACT+TGG | 0.562403 | 1.4:+87505617 | MS.gene90859:CDS |
| CGGCTCGAGCAAGCTTATTG+TGG | 0.563758 | 1.4:+87505195 | MS.gene90859:CDS |
| GCTCCTTCTGGTGAACCTTG+AGG | 0.567266 | 1.4:-87509327 | None:intergenic |
| CGACTCCAAGATCAGATGCT+CGG | 0.568828 | 1.4:-87505455 | None:intergenic |
| AAAGAGGTTTGGGCTTGAAG+GGG | 0.568860 | 1.4:+87505395 | MS.gene90859:CDS |
| TCGTGCTCCCTCTGCAGCCA+CGG | 0.569724 | 1.4:+87509294 | MS.gene90859:CDS |
| TAAGGCTTTGGCAACATCAG+TGG | 0.570847 | 1.4:-87505964 | None:intergenic |
| TTTCCTCAAGGTTCACCAGA+AGG | 0.574016 | 1.4:+87509324 | MS.gene90859:CDS |
| TCTAATACTATGTTCTGGAA+AGG | 0.576328 | 1.4:+87508268 | MS.gene90859:CDS |
| TCAGACTTTCCATTCAGATG+TGG | 0.576714 | 1.4:+87506064 | MS.gene90859:CDS |
| GGTGGCAAATCCTAGTCACT+TGG | 0.578223 | 1.4:+87505692 | MS.gene90859:CDS |
| TTAGGGGACATTACAATGAG+AGG | 0.578673 | 1.4:-87508095 | None:intergenic |
| TAATCACTCAAATGTTGAGG+AGG | 0.580006 | 1.4:+87508235 | MS.gene90859:CDS |
| AAAAGAAACCTCTATCGAAG+TGG | 0.580490 | 1.4:+87504655 | MS.gene90859:CDS |
| ATCCTCTTCACTGCTTTGTG+AGG | 0.580703 | 1.4:-87506634 | None:intergenic |
| GGAGGAGCTTCAAAGAGCAT+GGG | 0.581135 | 1.4:+87504840 | MS.gene90859:CDS |
| CTCCTCACAAAGCAGTGAAG+AGG | 0.584295 | 1.4:+87506632 | MS.gene90859:CDS |
| CGAGAACATAGTAATGGGAA+TGG | 0.585965 | 1.4:+87505476 | MS.gene90859:CDS |
| ATGAAGTCTTTAGGTAGGGG+AGG | 0.586969 | 1.4:+87509247 | MS.gene90859:CDS |
| AAGAGGTTTGGGCTTGAAGG+GGG | 0.587159 | 1.4:+87505396 | MS.gene90859:CDS |
| TTCTTATGATCGACCAACCA+GGG | 0.587940 | 1.4:+87505644 | MS.gene90859:CDS |
| TTCATTATCACATGGTCAAG+GGG | 0.588669 | 1.4:-87506847 | None:intergenic |
| GTTTAAGCTCTCGTTGGACA+AGG | 0.589416 | 1.4:-87508507 | None:intergenic |
| CCTGGCCACTTAAACGAACA+TGG | 0.591297 | 1.4:-87506753 | None:intergenic |
| ACGAACAAAGGTAGATGCAA+AGG | 0.591340 | 1.4:+87508438 | MS.gene90859:CDS |
| ACTTGTTGATGGAACAATTG+TGG | 0.593939 | 1.4:-87504701 | None:intergenic |
| GACAGGGGAAGATATTGACT+GGG | 0.595416 | 1.4:+87506684 | MS.gene90859:CDS |
| GATGATGTCCAAGGACACCC+TGG | 0.598289 | 1.4:+87508164 | MS.gene90859:CDS |
| CCGTGTCAAAATAGACCTAA+GGG | 0.600394 | 1.4:-87505175 | None:intergenic |
| CAGGGCCCAGAGCATTCAAG+TGG | 0.600899 | 1.4:+87507499 | MS.gene90859:CDS |
| GGTGATGTTAAATATCACTT+GGG | 0.602674 | 1.4:+87505618 | MS.gene90859:CDS |
| GGGCCAGGTTTAACTCATCA+GGG | 0.605243 | 1.4:-87505059 | None:intergenic |
| ACTGCGAAGCAGGTTCTTAG+GGG | 0.605529 | 1.4:-87508111 | None:intergenic |
| TTAGCCAATTACATTTGTCA+CGG | 0.606795 | 1.4:-87505251 | None:intergenic |
| ACTGAATTGTGTGGCCGCAG+GGG | 0.607583 | 1.4:-87505289 | None:intergenic |
| TCTCAGGAATAATATAAGGA+TGG | 0.609022 | 1.4:-87507862 | None:intergenic |
| AAATAATCACTCAAATGTTG+AGG | 0.609338 | 1.4:+87508232 | MS.gene90859:CDS |
| AATCACTCAAATGTTGAGGA+GGG | 0.611110 | 1.4:+87508236 | MS.gene90859:CDS |
| AAATCTCGAGAGCTGATGGA+TGG | 0.615462 | 1.4:-87506273 | None:intergenic |
| TAGCGGTGGCGGTCTACCAG+TGG | 0.616437 | 1.4:+87505569 | MS.gene90859:CDS |
| ATTCAGTCGGGAGCGTTGTG+AGG | 0.619301 | 1.4:+87505305 | MS.gene90859:CDS |
| TGGACAAGGTCATAAGGGAA+AGG | 0.619691 | 1.4:-87508493 | None:intergenic |
| TCTCATTATGGCCAAATCGA+CGG | 0.619734 | 1.4:-87506106 | None:intergenic |
| TAGAGCCCGACTTCATCCAC+TGG | 0.619771 | 1.4:-87505585 | None:intergenic |
| TATGATCGACCAACCAGGGG+CGG | 0.621592 | 1.4:+87505648 | MS.gene90859:CDS |
| AAAACTTCTTGGCCACCAAG+TGG | 0.621984 | 1.4:+87505364 | MS.gene90859:CDS |
| CCACATGGTTATGATGGCCA+GGG | 0.622395 | 1.4:+87507481 | MS.gene90859:CDS |
| GGATGTTGCAATATGTAGGG+TGG | 0.625280 | 1.4:+87508459 | MS.gene90859:CDS |
| TGACAAATGTAATTGGCTAA+GGG | 0.626052 | 1.4:+87505254 | MS.gene90859:CDS |
| TTTGACAATTTCCTGAGCTG+TGG | 0.626398 | 1.4:+87507415 | MS.gene90859:CDS |
| CCTGAGTGAGAGCCATGGGA+TGG | 0.626777 | 1.4:+87504596 | None:intergenic |
| AATCCCTGATGAGTTAAACC+TGG | 0.629777 | 1.4:+87505056 | MS.gene90859:CDS |
| GAAGAGCCAATGAACATGGG+TGG | 0.634696 | 1.4:+87509190 | MS.gene90859:CDS |
| ATATGCAGAACCCTTAGTAA+GGG | 0.635165 | 1.4:-87509396 | None:intergenic |
| AACAGCTCTATACCATCCCA+TGG | 0.635938 | 1.4:-87504608 | None:intergenic |
| TTCATGGAAGTTATAAGCCG+TGG | 0.637101 | 1.4:-87509229 | None:intergenic |
| ACTTGATGATCAACGAACAA+AGG | 0.638637 | 1.4:+87508426 | MS.gene90859:CDS |
| GTAATGGGAATGGCACATAG+AGG | 0.639268 | 1.4:+87505486 | MS.gene90859:CDS |
| CTTGAGGAAACCAGTAGCCG+TGG | 0.640041 | 1.4:-87509311 | None:intergenic |
| GATCTAGCTTGGCTTTCATG+TGG | 0.640805 | 1.4:-87505011 | None:intergenic |
| CATTGAGAAGATACACAAGA+AGG | 0.641702 | 1.4:+87506339 | MS.gene90859:CDS |
| AAAGGATGTTGCAATATGTA+GGG | 0.646866 | 1.4:+87508456 | MS.gene90859:CDS |
| CCAAGTGGACATCAGCAAAG+AGG | 0.651528 | 1.4:+87505379 | MS.gene90859:CDS |
| ATAGACCTAAGGGTCTGCAC+CGG | 0.653700 | 1.4:-87505165 | None:intergenic |
| TTGACCTGAAATTCTCGGAG+AGG | 0.656537 | 1.4:-87504932 | None:intergenic |
| CAAGAAGAGCCAATGAACAT+GGG | 0.658371 | 1.4:+87509187 | MS.gene90859:CDS |
| ACGCTCCCGACTGAATTGTG+TGG | 0.658409 | 1.4:-87505298 | None:intergenic |
| GTGCCCAAATGATCGAGACA+GGG | 0.662164 | 1.4:+87506668 | MS.gene90859:CDS |
| TATGTGAACTTGCTGCTGAG+TGG | 0.663207 | 1.4:+87506039 | MS.gene90859:CDS |
| TAAGCCTAGTAAGCGGCACA+GGG | 0.663448 | 1.4:-87504780 | None:intergenic |
| TTCCAAATTATACTACAGGT+GGG | 0.670371 | 1.4:+87505868 | MS.gene90859:CDS |
| TGCCCAAATGATCGAGACAG+GGG | 0.670418 | 1.4:+87506669 | MS.gene90859:CDS |
| TCTGATCATGAACTACAGCA+TGG | 0.677879 | 1.4:-87506804 | None:intergenic |
| AGGGCCCAGAGCATTCAAGT+GGG | 0.679507 | 1.4:+87507500 | MS.gene90859:CDS |
| CCCTGGCCATCATAACCATG+TGG | 0.690159 | 1.4:-87507481 | None:intergenic |
| GTTACCTTCAACTATCAATG+TGG | 0.690861 | 1.4:-87506731 | None:intergenic |
| AGTTCATGATCAGACAAATG+GGG | 0.692273 | 1.4:+87506813 | MS.gene90859:CDS |
| TCATTATCACATGGTCAAGG+GGG | 0.695392 | 1.4:-87506846 | None:intergenic |
| TCTTATGATCGACCAACCAG+GGG | 0.702480 | 1.4:+87505645 | MS.gene90859:CDS |
| TTGTCGGTAAGCCTAGTAAG+CGG | 0.704477 | 1.4:-87504787 | None:intergenic |
| GAATTCATTGGTGATCTGGG+AGG | 0.711762 | 1.4:+87507354 | MS.gene90859:CDS |
| TCATGTCAATGGTGATGACG+TGG | 0.719204 | 1.4:+87506001 | MS.gene90859:CDS |
| TTTCACGTATCCGTAACACT+GGG | 0.723315 | 1.4:+87506467 | MS.gene90859:CDS |
| ACAGGGGAAGATATTGACTG+GGG | 0.723426 | 1.4:+87506685 | MS.gene90859:CDS |
| GGCCCTTTATGGGTTCACCG+AGG | 0.734375 | 1.4:+87505077 | MS.gene90859:CDS |
| GATCATGAACTACAGCATGG+CGG | 0.764320 | 1.4:-87506801 | None:intergenic |
| GGAGAAGATTGAAACCCCTG+CGG | 0.773751 | 1.4:+87505275 | MS.gene90859:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATATTTATAACACTTGA+TGG | + | chr1.4:87507205-87507224 | MS.gene90859:intron | 15.0% |
| !! | ATAAGAGAATAATAAACAAA+AGG | - | chr1.4:87506176-87506195 | None:intergenic | 15.0% |
| !! | ATTCTCTTATTCTTTAAATA+TGG | + | chr1.4:87506186-87506205 | MS.gene90859:intron | 15.0% |
| !! | TAAGAGAATAATAAACAAAA+GGG | - | chr1.4:87506175-87506194 | None:intergenic | 15.0% |
| !!! | AAAAAAATTCTTTTAGTTCA+AGG | - | chr1.4:87507659-87507678 | None:intergenic | 15.0% |
| !!! | AATTCTAAATGATGAATTTT+TGG | + | chr1.4:87506369-87506388 | MS.gene90859:CDS | 15.0% |
| !!! | AATTTCAATAACATTTTTTC+TGG | - | chr1.4:87508893-87508912 | None:intergenic | 15.0% |
| !!! | ACTTAATCATCATTAAATTT+TGG | + | chr1.4:87509060-87509079 | MS.gene90859:intron | 15.0% |
| !!! | CTTAATCATCATTAAATTTT+GGG | + | chr1.4:87509061-87509080 | MS.gene90859:intron | 15.0% |
| !!! | TAATGATAGATTTTTCATTT+TGG | + | chr1.4:87507239-87507258 | MS.gene90859:intron | 15.0% |
| !!! | TTGAACTAAAAGAATTTTTT+TGG | + | chr1.4:87507658-87507677 | MS.gene90859:intron | 15.0% |
| !! | AATGATACTTAGTAAGTAAA+TGG | - | chr1.4:87507129-87507148 | None:intergenic | 20.0% |
| !! | GAAATTACTTTGAATTCTTA+CGG | + | chr1.4:87508907-87508926 | MS.gene90859:intron | 20.0% |
| !! | TTTCTAAATGTCAAAAAATG+TGG | + | chr1.4:87508937-87508956 | MS.gene90859:intron | 20.0% |
| !!! | AACTAAAAGAATTTTTTTGG+AGG | + | chr1.4:87507661-87507680 | MS.gene90859:intron | 20.0% |
| !!! | AATCAGATTTTAAACTTTCT+TGG | + | chr1.4:87506229-87506248 | MS.gene90859:intron | 20.0% |
| !!! | CAAATTTTTTCCATGTTTTA+CGG | + | chr1.4:87507951-87507970 | MS.gene90859:CDS | 20.0% |
| !!! | TATGATGATGTTAAATATGT+CGG | + | chr1.4:87509271-87509290 | MS.gene90859:CDS | 20.0% |
| !!! | TGATTTGTAGTGAAATTTAA+TGG | + | chr1.4:87507075-87507094 | MS.gene90859:intron | 20.0% |
| ! | AAAACATGGAAAAAATTTGC+TGG | - | chr1.4:87507950-87507969 | None:intergenic | 25.0% |
| ! | AAAGATGCAACAATATCATA+GGG | - | chr1.4:87508698-87508717 | None:intergenic | 25.0% |
| ! | AAATAATCACTCAAATGTTG+AGG | + | chr1.4:87508232-87508251 | MS.gene90859:CDS | 25.0% |
| ! | AACAAATTCAGGAATGTAAT+TGG | + | chr1.4:87507903-87507922 | MS.gene90859:CDS | 25.0% |
| ! | ATAGCGTATCAATTATTACT+TGG | - | chr1.4:87507273-87507292 | None:intergenic | 25.0% |
| ! | CATTAGAGATTTCTAAATGT+AGG | + | chr1.4:87508979-87508998 | MS.gene90859:intron | 25.0% |
| ! | CCTGCAATTCAATATTTATA+AGG | - | chr1.4:87509092-87509111 | None:intergenic | 25.0% |
| ! | CCTTATAAATATTGAATTGC+AGG | + | chr1.4:87509089-87509108 | MS.gene90859:intron | 25.0% |
| ! | CGACAAATTAAAATTTAGCT+AGG | - | chr1.4:87507053-87507072 | None:intergenic | 25.0% |
| ! | TAAAGATGCAACAATATCAT+AGG | - | chr1.4:87508699-87508718 | None:intergenic | 25.0% |
| ! | TATGATTGTCAATGTCTTAT+AGG | + | chr1.4:87508393-87508412 | MS.gene90859:intron | 25.0% |
| ! | TCAAAGCAAGAGTAATAAAT+TGG | + | chr1.4:87508774-87508793 | MS.gene90859:intron | 25.0% |
| ! | TCTACTGAATTATTTACAGA+TGG | + | chr1.4:87507832-87507851 | MS.gene90859:intron | 25.0% |
| ! | TGAAACTTAGAATTCATAAC+TGG | + | chr1.4:87507001-87507020 | MS.gene90859:intron | 25.0% |
| ! | TGAATATCATTGAAAGATGA+AGG | - | chr1.4:87507791-87507810 | None:intergenic | 25.0% |
| ! | TGGTATTAAGAAAATAAACC+AGG | + | chr1.4:87506930-87506949 | MS.gene90859:intron | 25.0% |
| !! | AATCTCTAATGAATTGACTT+TGG | - | chr1.4:87508970-87508989 | None:intergenic | 25.0% |
| !! | CAACATTTGAGTGATTATTT+TGG | - | chr1.4:87508232-87508251 | None:intergenic | 25.0% |
| !! | GATCTTCATTTTATGCAATA+CGG | + | chr1.4:87504677-87504696 | MS.gene90859:CDS | 25.0% |
| !! | GATTTATCAGAAGAAACTTT+TGG | + | chr1.4:87506291-87506310 | MS.gene90859:CDS | 25.0% |
| !! | TGGATAGAGAATTCTTTTTA+GGG | + | chr1.4:87505106-87505125 | MS.gene90859:CDS | 25.0% |
| !!! | AATAACATTTTTTCTGGTAG+TGG | - | chr1.4:87508887-87508906 | None:intergenic | 25.0% |
| !!! | AGAAGAAACTTTTGGAATTA+GGG | + | chr1.4:87506299-87506318 | MS.gene90859:CDS | 25.0% |
| !!! | ATGGATCATATATTTTGAAC+AGG | - | chr1.4:87507110-87507129 | None:intergenic | 25.0% |
| !!! | GATTATTTTGGTCTTTTATG+AGG | - | chr1.4:87508220-87508239 | None:intergenic | 25.0% |
| !!! | GATTTTTTTATTGCATGTTG+AGG | + | chr1.4:87508576-87508595 | MS.gene90859:intron | 25.0% |
| !!! | TACACTTTTTGAAAACTTCT+TGG | + | chr1.4:87505353-87505372 | MS.gene90859:CDS | 25.0% |
| !!! | TGGATCATATATTTTGAACA+GGG | - | chr1.4:87507109-87507128 | None:intergenic | 25.0% |
| !!! | TTCAAAACTCTCTTTAGAAT+GGG | + | chr1.4:87508548-87508567 | MS.gene90859:intron | 25.0% |
| AAAAGAAACTATCGTCGATA+TGG | - | chr1.4:87508748-87508767 | None:intergenic | 30.0% | |
| AAACTTTCTTGGCTATGTAT+AGG | + | chr1.4:87506240-87506259 | MS.gene90859:intron | 30.0% | |
| AAAGACAAAACATCTTCCAA+AGG | - | chr1.4:87507756-87507775 | None:intergenic | 30.0% | |
| AAAGGATGTTGCAATATGTA+GGG | + | chr1.4:87508456-87508475 | MS.gene90859:CDS | 30.0% | |
| AAGAATACATTTGTCTTTGG+TGG | + | chr1.4:87505674-87505693 | MS.gene90859:CDS | 30.0% | |
| AAGGTTCATCAATCTCATTA+TGG | - | chr1.4:87506121-87506140 | None:intergenic | 30.0% | |
| AATACCATTACATACACATG+TGG | - | chr1.4:87506917-87506936 | None:intergenic | 30.0% | |
| AATGGAAAATCCGAATTCAT+TGG | + | chr1.4:87507342-87507361 | MS.gene90859:CDS | 30.0% | |
| AATTGATAGGTTCACTTTGA+AGG | - | chr1.4:87509375-87509394 | None:intergenic | 30.0% | |
| AATTTCTTCAGGAACTTTGT+GGG | + | chr1.4:87504898-87504917 | MS.gene90859:CDS | 30.0% | |
| ACATTACAATGAGAGGTTTA+CGG | - | chr1.4:87508091-87508110 | None:intergenic | 30.0% | |
| AGATGTTTACTGTTAGCAAT+AGG | + | chr1.4:87506881-87506900 | MS.gene90859:CDS | 30.0% | |
| ATAACTTCCATGAAGTCTTT+AGG | + | chr1.4:87509238-87509257 | MS.gene90859:CDS | 30.0% | |
| ATCACAAAGTAGACCATAAT+TGG | - | chr1.4:87507626-87507645 | None:intergenic | 30.0% | |
| ATCACCATTGACATGAAATA+TGG | - | chr1.4:87505997-87506016 | None:intergenic | 30.0% | |
| ATGAGTAATGTTCGGAAATA+TGG | - | chr1.4:87508344-87508363 | None:intergenic | 30.0% | |
| ATTGATAGGTTCACTTTGAA+GGG | - | chr1.4:87509374-87509393 | None:intergenic | 30.0% | |
| ATTTGAATTGGGTTACTCAA+TGG | + | chr1.4:87507324-87507343 | MS.gene90859:CDS | 30.0% | |
| GAAAAGTAACATTGTAAACC+TGG | - | chr1.4:87506951-87506970 | None:intergenic | 30.0% | |
| GAGAAGAATACATTTGTCTT+TGG | + | chr1.4:87505671-87505690 | MS.gene90859:CDS | 30.0% | |
| GCTGAAAGAATGAAAAACAT+GGG | + | chr1.4:87505774-87505793 | MS.gene90859:CDS | 30.0% | |
| GGTGATGTTAAATATCACTT+GGG | + | chr1.4:87505618-87505637 | MS.gene90859:CDS | 30.0% | |
| TAGTTCATGATCAGACAAAT+GGG | + | chr1.4:87506812-87506831 | MS.gene90859:CDS | 30.0% | |
| TCAAACATTTCTTTCATTCC+AGG | - | chr1.4:87505435-87505454 | None:intergenic | 30.0% | |
| TCAAAGCAATGAGTAATGTT+CGG | - | chr1.4:87508352-87508371 | None:intergenic | 30.0% | |
| TCACCATTGACATGAAATAT+GGG | - | chr1.4:87505996-87506015 | None:intergenic | 30.0% | |
| TCCAACAGTAATCAACATAA+AGG | - | chr1.4:87507172-87507191 | None:intergenic | 30.0% | |
| TCCATCTCAGGAATAATATA+AGG | - | chr1.4:87507869-87507888 | None:intergenic | 30.0% | |
| TCCTTATATTATTCCTGAGA+TGG | + | chr1.4:87507865-87507884 | MS.gene90859:CDS | 30.0% | |
| TCTCAGGAATAATATAAGGA+TGG | - | chr1.4:87507865-87507884 | None:intergenic | 30.0% | |
| TGACAAATGTAATTGGCTAA+GGG | + | chr1.4:87505254-87505273 | MS.gene90859:CDS | 30.0% | |
| TGCTGAAAGAATGAAAAACA+TGG | + | chr1.4:87505773-87505792 | MS.gene90859:CDS | 30.0% | |
| TTACCGACAATTTCTTAGAT+GGG | + | chr1.4:87504800-87504819 | MS.gene90859:CDS | 30.0% | |
| TTAGCCAATTACATTTGTCA+CGG | - | chr1.4:87505254-87505273 | None:intergenic | 30.0% | |
| TTATTCTTTCTGCATGAATC+TGG | + | chr1.4:87507597-87507616 | MS.gene90859:intron | 30.0% | |
| TTCCAAATTATACTACAGGT+GGG | + | chr1.4:87505868-87505887 | MS.gene90859:CDS | 30.0% | |
| TTCTAAATGTAGGAAAGCTT+TGG | + | chr1.4:87508989-87509008 | MS.gene90859:intron | 30.0% | |
| ! | ACTAGTTTCCACACTATTAA+CGG | - | chr1.4:87508631-87508650 | None:intergenic | 30.0% |
| ! | AGAGGAAGATTGAATGTTTT+GGG | + | chr1.4:87505504-87505523 | MS.gene90859:CDS | 30.0% |
| ! | CTGGATAGAGAATTCTTTTT+AGG | + | chr1.4:87505105-87505124 | MS.gene90859:CDS | 30.0% |
| ! | GGATAGAGAATTCTTTTTAG+GGG | + | chr1.4:87505107-87505126 | MS.gene90859:CDS | 30.0% |
| ! | GTTCAAAACTCTCTTTAGAA+TGG | + | chr1.4:87508547-87508566 | MS.gene90859:intron | 30.0% |
| ! | TAGAGGAAGATTGAATGTTT+TGG | + | chr1.4:87505503-87505522 | MS.gene90859:CDS | 30.0% |
| ! | TGAAAGTTTCTACTTGTTGA+TGG | - | chr1.4:87504715-87504734 | None:intergenic | 30.0% |
| ! | TGGTGATGTTAAATATCACT+TGG | + | chr1.4:87505617-87505636 | MS.gene90859:CDS | 30.0% |
| !! | ATGTTTTGGGTAATGTAGTT+CGG | + | chr1.4:87505517-87505536 | MS.gene90859:CDS | 30.0% |
| !! | CAATTTGGTGATTTTGTGAA+TGG | + | chr1.4:87507379-87507398 | MS.gene90859:CDS | 30.0% |
| !! | CCAACATTTTTCAAAATCTC+CGG | - | chr1.4:87506580-87506599 | None:intergenic | 30.0% |
| !! | CGGAGATTTTGAAAAATGTT+GGG | + | chr1.4:87506578-87506597 | MS.gene90859:CDS | 30.0% |
| !! | GATTTTGAAAAATGTTGGGA+AGG | + | chr1.4:87506582-87506601 | MS.gene90859:CDS | 30.0% |
| !! | TCTAATACTATGTTCTGGAA+AGG | + | chr1.4:87508268-87508287 | MS.gene90859:CDS | 30.0% |
| !!! | CAGAAGAAACTTTTGGAATT+AGG | + | chr1.4:87506298-87506317 | MS.gene90859:CDS | 30.0% |
| !!! | GAAGAAACTTTTGGAATTAG+GGG | + | chr1.4:87506300-87506319 | MS.gene90859:CDS | 30.0% |
| !!! | GTTGTGAGGTTATTTTTGAT+AGG | + | chr1.4:87505319-87505338 | MS.gene90859:CDS | 30.0% |
| !!! | TTATTTTTGATAGGCTTGCT+TGG | + | chr1.4:87505328-87505347 | MS.gene90859:CDS | 30.0% |
| !!! | TTTTTTTGGAGGTCAGATTT+AGG | + | chr1.4:87507672-87507691 | MS.gene90859:intron | 30.0% |
| AAAAGAAACCTCTATCGAAG+TGG | + | chr1.4:87504655-87504674 | MS.gene90859:CDS | 35.0% | |
| AATCACTCAAATGTTGAGGA+GGG | + | chr1.4:87508236-87508255 | MS.gene90859:CDS | 35.0% | |
| AATGCTTCAGAGAAGTTTCA+AGG | - | chr1.4:87507578-87507597 | None:intergenic | 35.0% | |
| AGTTCATGATCAGACAAATG+GGG | + | chr1.4:87506813-87506832 | MS.gene90859:CDS | 35.0% | |
| ATCGTTTGACCTGAAATTCT+CGG | - | chr1.4:87504940-87504959 | None:intergenic | 35.0% | |
| ATCTATGATCAATCTTGTGC+AGG | + | chr1.4:87506548-87506567 | MS.gene90859:intron | 35.0% | |
| ATGAACAGTCAGTTTGAATG+AGG | - | chr1.4:87508302-87508321 | None:intergenic | 35.0% | |
| ATGAATCTGGTTGCCAATTA+TGG | + | chr1.4:87507610-87507629 | MS.gene90859:intron | 35.0% | |
| ATGTACTATACCCAGTGTTA+CGG | - | chr1.4:87506480-87506499 | None:intergenic | 35.0% | |
| CAAAGGATGTTGCAATATGT+AGG | + | chr1.4:87508455-87508474 | MS.gene90859:CDS | 35.0% | |
| CAATTTCTTCAGGAACTTTG+TGG | + | chr1.4:87504897-87504916 | MS.gene90859:CDS | 35.0% | |
| CACACAGCCTAAAATGTATA+AGG | + | chr1.4:87506145-87506164 | MS.gene90859:CDS | 35.0% | |
| CAGCCTAAAATGTATAAGGT+TGG | + | chr1.4:87506149-87506168 | MS.gene90859:intron | 35.0% | |
| CATTGAGAAGATACACAAGA+AGG | + | chr1.4:87506339-87506358 | MS.gene90859:CDS | 35.0% | |
| CTTACCGACAATTTCTTAGA+TGG | + | chr1.4:87504799-87504818 | MS.gene90859:CDS | 35.0% | |
| CTTCCAAATTATACTACAGG+TGG | + | chr1.4:87505867-87505886 | MS.gene90859:CDS | 35.0% | |
| GCTCTTCCAAATTATACTAC+AGG | + | chr1.4:87505864-87505883 | MS.gene90859:CDS | 35.0% | |
| GGTGTTCTTGGATTTGAATT+GGG | + | chr1.4:87507313-87507332 | MS.gene90859:CDS | 35.0% | |
| GTAGTTCATGATCAGACAAA+TGG | + | chr1.4:87506811-87506830 | MS.gene90859:CDS | 35.0% | |
| GTGACAAATGTAATTGGCTA+AGG | + | chr1.4:87505253-87505272 | MS.gene90859:CDS | 35.0% | |
| GTTACCTTCAACTATCAATG+TGG | - | chr1.4:87506734-87506753 | None:intergenic | 35.0% | |
| GTTCATTATCACATGGTCAA+GGG | - | chr1.4:87506851-87506870 | None:intergenic | 35.0% | |
| TAATCACTCAAATGTTGAGG+AGG | + | chr1.4:87508235-87508254 | MS.gene90859:CDS | 35.0% | |
| TACTCTTCGGAAACAAATTC+AGG | + | chr1.4:87507892-87507911 | MS.gene90859:CDS | 35.0% | |
| TCGCAAAATATCTGACGAAT+CGG | - | chr1.4:87505546-87505565 | None:intergenic | 35.0% | |
| TCTATGATCAATCTTGTGCA+GGG | + | chr1.4:87506549-87506568 | MS.gene90859:intron | 35.0% | |
| TCTTCCACATGTGTATGTAA+TGG | + | chr1.4:87506910-87506929 | MS.gene90859:intron | 35.0% | |
| TGAACAGTCAGTTTGAATGA+GGG | - | chr1.4:87508301-87508320 | None:intergenic | 35.0% | |
| TGGTGTTCTTGGATTTGAAT+TGG | + | chr1.4:87507312-87507331 | MS.gene90859:CDS | 35.0% | |
| TTACGTTCTTCAAGACCTAA+AGG | - | chr1.4:87505036-87505055 | None:intergenic | 35.0% | |
| TTACTTCCACATGGTTATGA+TGG | + | chr1.4:87507475-87507494 | MS.gene90859:CDS | 35.0% | |
| TTCATTATCACATGGTCAAG+GGG | - | chr1.4:87506850-87506869 | None:intergenic | 35.0% | |
| TTCCATGAAGTCTTTAGGTA+GGG | + | chr1.4:87509243-87509262 | MS.gene90859:CDS | 35.0% | |
| ! | AATTTCAGGTCAAACGATTC+AGG | + | chr1.4:87504942-87504961 | MS.gene90859:CDS | 35.0% |
| ! | ACTTGATGATCAACGAACAA+AGG | + | chr1.4:87508426-87508445 | MS.gene90859:CDS | 35.0% |
| ! | ACTTGTTGATGGAACAATTG+TGG | - | chr1.4:87504704-87504723 | None:intergenic | 35.0% |
| ! | ATTTTAGGCTGTGTGAAAGA+AGG | - | chr1.4:87506140-87506159 | None:intergenic | 35.0% |
| ! | ATTTTTGTCAGAGAATCGTC+CGG | + | chr1.4:87505146-87505165 | MS.gene90859:CDS | 35.0% |
| ! | CAGATATTTTGCGAGTTTAG+CGG | + | chr1.4:87505552-87505571 | MS.gene90859:CDS | 35.0% |
| ! | CTAATCTCTGCTTGTTAGTT+GGG | + | chr1.4:87508801-87508820 | MS.gene90859:intron | 35.0% |
| ! | GAGTTTTTCCAACAACAAGT+GGG | - | chr1.4:87505728-87505747 | None:intergenic | 35.0% |
| ! | GATACACATACGTTTTACCA+CGG | + | chr1.4:87509212-87509231 | MS.gene90859:CDS | 35.0% |
| ! | GCCTTTATGTTGATTACTGT+TGG | + | chr1.4:87507168-87507187 | MS.gene90859:intron | 35.0% |
| ! | TCTAATCTCTGCTTGTTAGT+TGG | + | chr1.4:87508800-87508819 | MS.gene90859:intron | 35.0% |
| ! | TGAATTTGTTTCCGAAGAGT+AGG | - | chr1.4:87507893-87507912 | None:intergenic | 35.0% |
| ! | TTAGTATGTTACCGTCGATT+TGG | + | chr1.4:87506095-87506114 | MS.gene90859:CDS | 35.0% |
| ! | TTCCTTGTTTGTCAAAACCA+GGG | - | chr1.4:87508184-87508203 | None:intergenic | 35.0% |
| ! | TTTTTGTGCTATAGTTGCAG+AGG | + | chr1.4:87509153-87509172 | MS.gene90859:intron | 35.0% |
| !! | AAGCTTATTGTGGAAGCATT+GGG | + | chr1.4:87505205-87505224 | MS.gene90859:CDS | 35.0% |
| !! | ATGAAATATGGGAGCGTTTA+AGG | - | chr1.4:87505985-87506004 | None:intergenic | 35.0% |
| !! | CCGGAGATTTTGAAAAATGT+TGG | + | chr1.4:87506577-87506596 | MS.gene90859:CDS | 35.0% |
| !! | GAGAATTCTTTTTAGGGGTA+TGG | + | chr1.4:87505112-87505131 | MS.gene90859:CDS | 35.0% |
| !! | TTTTATGAGGCGCTTAAATC+TGG | - | chr1.4:87508207-87508226 | None:intergenic | 35.0% |
| !!! | ACATTTTTTCTGGTAGTGGT+AGG | - | chr1.4:87508883-87508902 | None:intergenic | 35.0% |
| !!! | GAGTTTTGAACAGACATACT+TGG | - | chr1.4:87508538-87508557 | None:intergenic | 35.0% |
| AAACAGTGTAGACGAGTCTT+GGG | + | chr1.4:87504873-87504892 | MS.gene90859:CDS | 40.0% | |
| AAAGCCAAGCTAGATCCTTT+AGG | + | chr1.4:87505018-87505037 | MS.gene90859:CDS | 40.0% | |
| AAGACCTAAAGGATCTAGCT+TGG | - | chr1.4:87505025-87505044 | None:intergenic | 40.0% | |
| AATCCCTGATGAGTTAAACC+TGG | + | chr1.4:87505056-87505075 | MS.gene90859:CDS | 40.0% | |
| AATTGAATGCTTCGCTATGC+CGG | - | chr1.4:87504635-87504654 | None:intergenic | 40.0% | |
| ACGAACAAAGGTAGATGCAA+AGG | + | chr1.4:87508438-87508457 | MS.gene90859:CDS | 40.0% | |
| AGGCGTCTAATACTATGTTC+TGG | + | chr1.4:87508263-87508282 | MS.gene90859:CDS | 40.0% | |
| AGTCTTGGGACAATTTCTTC+AGG | + | chr1.4:87504887-87504906 | MS.gene90859:CDS | 40.0% | |
| AGTTAAACCTGGCCCTTTAT+GGG | + | chr1.4:87505067-87505086 | MS.gene90859:CDS | 40.0% | |
| ATCTTCCAGACAGAAGAGAT+TGG | + | chr1.4:87506404-87506423 | MS.gene90859:CDS | 40.0% | |
| ATGAAGATCCACTTCGATAG+AGG | - | chr1.4:87504666-87504685 | None:intergenic | 40.0% | |
| CAAACTGACTGTTCATCTAG+TGG | + | chr1.4:87508306-87508325 | MS.gene90859:intron | 40.0% | |
| CAAGAAGAGCCAATGAACAT+GGG | + | chr1.4:87509187-87509206 | MS.gene90859:CDS | 40.0% | |
| CAATTACATTTGTCACGGTC+AGG | - | chr1.4:87505249-87505268 | None:intergenic | 40.0% | |
| CAGTAAACATCTCTTCGTTC+TGG | - | chr1.4:87506873-87506892 | None:intergenic | 40.0% | |
| CCGTGTCAAAATAGACCTAA+GGG | - | chr1.4:87505178-87505197 | None:intergenic | 40.0% | |
| CGTCCCATCTAAGAAATTGT+CGG | - | chr1.4:87504806-87504825 | None:intergenic | 40.0% | |
| CTATAGTTGCAGAGGTTGTT+TGG | + | chr1.4:87509161-87509180 | MS.gene90859:intron | 40.0% | |
| CTGACCGTGACAAATGTAAT+TGG | + | chr1.4:87505247-87505266 | MS.gene90859:CDS | 40.0% | |
| CTTCCATGAAGTCTTTAGGT+AGG | + | chr1.4:87509242-87509261 | MS.gene90859:CDS | 40.0% | |
| GATATCGTTTAAGCTCTCGT+TGG | - | chr1.4:87508516-87508535 | None:intergenic | 40.0% | |
| GCTCCCATATTTCATGTCAA+TGG | + | chr1.4:87505990-87506009 | MS.gene90859:CDS | 40.0% | |
| GGAGTCGAGAACATAGTAAT+GGG | + | chr1.4:87505471-87505490 | MS.gene90859:CDS | 40.0% | |
| GGTAACCATGTTCGTTTAAG+TGG | + | chr1.4:87506748-87506767 | MS.gene90859:CDS | 40.0% | |
| GGTTCATTATCACATGGTCA+AGG | - | chr1.4:87506852-87506871 | None:intergenic | 40.0% | |
| GTCCCACCTGTAGTATAATT+TGG | - | chr1.4:87505873-87505892 | None:intergenic | 40.0% | |
| GTCTGGAAGATAATCTTTGC+TGG | - | chr1.4:87506395-87506414 | None:intergenic | 40.0% | |
| TCAAGAAGAGCCAATGAACA+TGG | + | chr1.4:87509186-87509205 | MS.gene90859:CDS | 40.0% | |
| TCAGACTTTCCATTCAGATG+TGG | + | chr1.4:87506064-87506083 | MS.gene90859:CDS | 40.0% | |
| TCATTATCACATGGTCAAGG+GGG | - | chr1.4:87506849-87506868 | None:intergenic | 40.0% | |
| TCCATGAAGTCTTTAGGTAG+GGG | + | chr1.4:87509244-87509263 | MS.gene90859:CDS | 40.0% | |
| TCCCAGATCACCAATGAATT+CGG | - | chr1.4:87507355-87507374 | None:intergenic | 40.0% | |
| TCTCATTATGGCCAAATCGA+CGG | - | chr1.4:87506109-87506128 | None:intergenic | 40.0% | |
| TCTGATCATGAACTACAGCA+TGG | - | chr1.4:87506807-87506826 | None:intergenic | 40.0% | |
| TGATAAATCTCGAGAGCTGA+TGG | - | chr1.4:87506280-87506299 | None:intergenic | 40.0% | |
| TGGAGTCGAGAACATAGTAA+TGG | + | chr1.4:87505470-87505489 | MS.gene90859:CDS | 40.0% | |
| TTAGGGGACATTACAATGAG+AGG | - | chr1.4:87508098-87508117 | None:intergenic | 40.0% | |
| TTCATAAACTACGCCTTGTC+CGG | - | chr1.4:87505829-87505848 | None:intergenic | 40.0% | |
| TTCATGGAAGTTATAAGCCG+TGG | - | chr1.4:87509232-87509251 | None:intergenic | 40.0% | |
| TTCTTATGATCGACCAACCA+GGG | + | chr1.4:87505644-87505663 | MS.gene90859:CDS | 40.0% | |
| TTTACAACTGATCCCAAGTC+AGG | + | chr1.4:87505924-87505943 | MS.gene90859:CDS | 40.0% | |
| TTTACTGCTTCCAAGTGACT+AGG | - | chr1.4:87505705-87505724 | None:intergenic | 40.0% | |
| TTTCACGTATCCGTAACACT+GGG | + | chr1.4:87506467-87506486 | MS.gene90859:CDS | 40.0% | |
| TTTGACAATTTCCTGAGCTG+TGG | + | chr1.4:87507415-87507434 | MS.gene90859:CDS | 40.0% | |
| TTTGGAGGTCAGATTTAGGA+TGG | + | chr1.4:87507676-87507695 | MS.gene90859:intron | 40.0% | |
| ! | ATATTTTGCGAGTTTAGCGG+TGG | + | chr1.4:87505555-87505574 | MS.gene90859:CDS | 40.0% |
| ! | ATCCGAATTCATTGGTGATC+TGG | + | chr1.4:87507350-87507369 | MS.gene90859:CDS | 40.0% |
| ! | CAAGCTTATTGTGGAAGCAT+TGG | + | chr1.4:87505204-87505223 | MS.gene90859:CDS | 40.0% |
| ! | CGAGAACATAGTAATGGGAA+TGG | + | chr1.4:87505476-87505495 | MS.gene90859:CDS | 40.0% |
| ! | CGAGTTTTTCCAACAACAAG+TGG | - | chr1.4:87505729-87505748 | None:intergenic | 40.0% |
| ! | GGGCCAACCTTATACATTTT+AGG | - | chr1.4:87506155-87506174 | None:intergenic | 40.0% |
| ! | GTTCCTTGTTTGTCAAAACC+AGG | - | chr1.4:87508185-87508204 | None:intergenic | 40.0% |
| ! | TCCGAATTCATTGGTGATCT+GGG | + | chr1.4:87507351-87507370 | MS.gene90859:CDS | 40.0% |
| ! | TTAGGGGTATGGAATATGTC+TGG | + | chr1.4:87505123-87505142 | MS.gene90859:CDS | 40.0% |
| ! | TTCGCCACATTGATAGTTGA+AGG | + | chr1.4:87506727-87506746 | MS.gene90859:CDS | 40.0% |
| ! | TTGTCTCTTGTTGCTTCCTT+TGG | + | chr1.4:87507737-87507756 | MS.gene90859:intron | 40.0% |
| ! | TTGTGAGGAGTAAGGTTTTC+AGG | - | chr1.4:87506622-87506641 | None:intergenic | 40.0% |
| !! | CGTTCTGGTTCATTATCACA+TGG | - | chr1.4:87506858-87506877 | None:intergenic | 40.0% |
| !! | CTTTCTGAGTTTGGTGTTCT+TGG | + | chr1.4:87507301-87507320 | MS.gene90859:CDS | 40.0% |
| !! | GAGATTGGCTTTCAGCATAT+TGG | + | chr1.4:87506419-87506438 | MS.gene90859:CDS | 40.0% |
| !! | TCTGAGTTTGATGATGTCCA+AGG | + | chr1.4:87508155-87508174 | MS.gene90859:CDS | 40.0% |
| !!! | AACATGGGCGTTTTGATTCA+CGG | + | chr1.4:87505789-87505808 | MS.gene90859:CDS | 40.0% |
| !!! | CCCTTAGGTCTATTTTGACA+CGG | + | chr1.4:87505175-87505194 | MS.gene90859:CDS | 40.0% |
| AAAACTTCTTGGCCACCAAG+TGG | + | chr1.4:87505364-87505383 | MS.gene90859:CDS | 45.0% | |
| AAAGAGGTTTGGGCTTGAAG+GGG | + | chr1.4:87505395-87505414 | MS.gene90859:CDS | 45.0% | |
| AAATCTCGAGAGCTGATGGA+TGG | - | chr1.4:87506276-87506295 | None:intergenic | 45.0% | |
| AATCTCCCACTTGAATGCTC+TGG | - | chr1.4:87507508-87507527 | None:intergenic | 45.0% | |
| AGACAGGGGAAGATATTGAC+TGG | + | chr1.4:87506683-87506702 | MS.gene90859:CDS | 45.0% | |
| AGTCGACAACCACATCTGAA+TGG | - | chr1.4:87506076-87506095 | None:intergenic | 45.0% | |
| ATCCTCTTCACTGCTTTGTG+AGG | - | chr1.4:87506637-87506656 | None:intergenic | 45.0% | |
| ATCTCCCACTTGAATGCTCT+GGG | - | chr1.4:87507507-87507526 | None:intergenic | 45.0% | |
| ATGAAGTCTTTAGGTAGGGG+AGG | + | chr1.4:87509247-87509266 | MS.gene90859:CDS | 45.0% | |
| CAAACAGTGTAGACGAGTCT+TGG | + | chr1.4:87504872-87504891 | MS.gene90859:CDS | 45.0% | |
| CAAAGAGGTTTGGGCTTGAA+GGG | + | chr1.4:87505394-87505413 | MS.gene90859:CDS | 45.0% | |
| CAAGACTCGTCTACACTGTT+TGG | - | chr1.4:87504874-87504893 | None:intergenic | 45.0% | |
| CAGCAGCAAGTTCACATACA+TGG | - | chr1.4:87506037-87506056 | None:intergenic | 45.0% | |
| CTCGTTGGACAAGGTCATAA+GGG | - | chr1.4:87508501-87508520 | None:intergenic | 45.0% | |
| CTGAGATGGATCCTACTCTT+CGG | + | chr1.4:87507879-87507898 | MS.gene90859:CDS | 45.0% | |
| CTTCTTATGATCGACCAACC+AGG | + | chr1.4:87505643-87505662 | MS.gene90859:CDS | 45.0% | |
| CTTTCACGTATCCGTAACAC+TGG | + | chr1.4:87506466-87506485 | MS.gene90859:CDS | 45.0% | |
| CTTTCATGTGGCCATTAACC+TGG | - | chr1.4:87505002-87505021 | None:intergenic | 45.0% | |
| GAAAGCCAATCTCTTCTGTC+TGG | - | chr1.4:87506412-87506431 | None:intergenic | 45.0% | |
| GAGATTGGAACGCTTTCTTC+AGG | + | chr1.4:87507522-87507541 | MS.gene90859:CDS | 45.0% | |
| GAGTTAAACCTGGCCCTTTA+TGG | + | chr1.4:87505066-87505085 | MS.gene90859:CDS | 45.0% | |
| GATCATGAACTACAGCATGG+CGG | - | chr1.4:87506804-87506823 | None:intergenic | 45.0% | |
| GCCGTGTCAAAATAGACCTA+AGG | - | chr1.4:87505179-87505198 | None:intergenic | 45.0% | |
| GGACATCAGCAAAGAGGTTT+GGG | + | chr1.4:87505385-87505404 | MS.gene90859:CDS | 45.0% | |
| GGATGTTGCAATATGTAGGG+TGG | + | chr1.4:87508459-87508478 | MS.gene90859:CDS | 45.0% | |
| GTGTATCCACCCATGTTCAT+TGG | - | chr1.4:87509199-87509218 | None:intergenic | 45.0% | |
| GTTTAAGCTCTCGTTGGACA+AGG | - | chr1.4:87508510-87508529 | None:intergenic | 45.0% | |
| TAAGAACCTGCTTCGCAGTA+AGG | + | chr1.4:87508115-87508134 | MS.gene90859:CDS | 45.0% | |
| TACTGCGAAGCAGGTTCTTA+GGG | - | chr1.4:87508115-87508134 | None:intergenic | 45.0% | |
| TCACTGCTTTGTGAGGAGTA+AGG | - | chr1.4:87506630-87506649 | None:intergenic | 45.0% | |
| TCCACACTATTAACGGCAAC+AGG | - | chr1.4:87508624-87508643 | None:intergenic | 45.0% | |
| TCCCCTACCTAAAGACTTCA+TGG | - | chr1.4:87509248-87509267 | None:intergenic | 45.0% | |
| TCTCGTTGGACAAGGTCATA+AGG | - | chr1.4:87508502-87508521 | None:intergenic | 45.0% | |
| TCTTATGATCGACCAACCAG+GGG | + | chr1.4:87505645-87505664 | MS.gene90859:CDS | 45.0% | |
| TGCAGCTCACTTTCTGAGTT+TGG | + | chr1.4:87507292-87507311 | MS.gene90859:intron | 45.0% | |
| TGGACAAGGTCATAAGGGAA+AGG | - | chr1.4:87508496-87508515 | None:intergenic | 45.0% | |
| TGGACATCAGCAAAGAGGTT+TGG | + | chr1.4:87505384-87505403 | MS.gene90859:CDS | 45.0% | |
| TGGCTTTCAGCATATTGGTC+TGG | + | chr1.4:87506424-87506443 | MS.gene90859:CDS | 45.0% | |
| TTACTGCGAAGCAGGTTCTT+AGG | - | chr1.4:87508116-87508135 | None:intergenic | 45.0% | |
| TTCCCCTGTCTCGATCATTT+GGG | - | chr1.4:87506674-87506693 | None:intergenic | 45.0% | |
| TTCTCTATCCAGATCAGCCT+CGG | - | chr1.4:87505097-87505116 | None:intergenic | 45.0% | |
| TTGACCTGAAATTCTCGGAG+AGG | - | chr1.4:87504935-87504954 | None:intergenic | 45.0% | |
| TTGTCGGTAAGCCTAGTAAG+CGG | - | chr1.4:87504790-87504809 | None:intergenic | 45.0% | |
| TTTCCTCAAGGTTCACCAGA+AGG | + | chr1.4:87509324-87509343 | MS.gene90859:CDS | 45.0% | |
| TTTGACCGAGCATCTGATCT+TGG | + | chr1.4:87505450-87505469 | MS.gene90859:CDS | 45.0% | |
| ! | ACAGGGGAAGATATTGACTG+GGG | + | chr1.4:87506685-87506704 | MS.gene90859:CDS | 45.0% |
| ! | AGAGCATTCAAGTGGGAGAT+TGG | + | chr1.4:87507507-87507526 | MS.gene90859:CDS | 45.0% |
| ! | ATCTCTGCTTGTTAGTTGGG+AGG | + | chr1.4:87508804-87508823 | MS.gene90859:intron | 45.0% |
| ! | GAATTCATTGGTGATCTGGG+AGG | + | chr1.4:87507354-87507373 | MS.gene90859:CDS | 45.0% |
| ! | GACAGGGGAAGATATTGACT+GGG | + | chr1.4:87506684-87506703 | MS.gene90859:CDS | 45.0% |
| ! | GATCTAGCTTGGCTTTCATG+TGG | - | chr1.4:87505014-87505033 | None:intergenic | 45.0% |
| ! | GGATGGTATAGAGCTGTTTC+CGG | + | chr1.4:87504613-87504632 | MS.gene90859:CDS | 45.0% |
| ! | GTAATGGGAATGGCACATAG+AGG | + | chr1.4:87505486-87505505 | MS.gene90859:CDS | 45.0% |
| ! | GTGAGAGCATACCAGGTTAA+TGG | + | chr1.4:87504988-87505007 | MS.gene90859:CDS | 45.0% |
| ! | GTTACTTGTGAGAGCATACC+AGG | + | chr1.4:87504981-87505000 | MS.gene90859:CDS | 45.0% |
| ! | TAAGGCTTTGGCAACATCAG+TGG | - | chr1.4:87505967-87505986 | None:intergenic | 45.0% |
| ! | TCATGTCAATGGTGATGACG+TGG | + | chr1.4:87506001-87506020 | MS.gene90859:CDS | 45.0% |
| ! | TTTCCATGTTTTACGGCGAC+AGG | + | chr1.4:87507958-87507977 | MS.gene90859:CDS | 45.0% |
| !! | CAAATGTTGAGGAGGGTATC+AGG | + | chr1.4:87508243-87508262 | MS.gene90859:CDS | 45.0% |
| !! | CTCGTTGTGTTACTTCCACA+TGG | + | chr1.4:87507466-87507485 | MS.gene90859:CDS | 45.0% |
| !! | GCAGTAAACCCACTTGTTGT+TGG | + | chr1.4:87505717-87505736 | MS.gene90859:CDS | 45.0% |
| !! | TATGGGAGCGTTTAAGGCTT+TGG | - | chr1.4:87505979-87505998 | None:intergenic | 45.0% |
| !! | TATGTGAACTTGCTGCTGAG+TGG | + | chr1.4:87506039-87506058 | MS.gene90859:CDS | 45.0% |
| !! | TATTGACTGGGGTTTTGCAG+AGG | + | chr1.4:87506696-87506715 | MS.gene90859:CDS | 45.0% |
| !!! | CACCCTGGTTTTGACAAACA+AGG | + | chr1.4:87508179-87508198 | MS.gene90859:CDS | 45.0% |
| AAGAGGTTTGGGCTTGAAGG+GGG | + | chr1.4:87505396-87505415 | MS.gene90859:CDS | 50.0% | |
| AATCTTGTGCAGGGTGAAGC+CGG | + | chr1.4:87506558-87506577 | MS.gene90859:intron | 50.0% | |
| ACCTGAAATTCTCGGAGAGG+TGG | - | chr1.4:87504932-87504951 | None:intergenic | 50.0% | |
| ACGTTCCTCTTTCAACGTCC+TGG | - | chr1.4:87506774-87506793 | None:intergenic | 50.0% | |
| ACTGCGAAGCAGGTTCTTAG+GGG | - | chr1.4:87508114-87508133 | None:intergenic | 50.0% | |
| ACTTAGACTCACCACAGCTC+AGG | - | chr1.4:87507429-87507448 | None:intergenic | 50.0% | |
| AGCCTCGGTGAACCCATAAA+GGG | - | chr1.4:87505082-87505101 | None:intergenic | 50.0% | |
| AGGGCCAGGTTTAACTCATC+AGG | - | chr1.4:87505063-87505082 | None:intergenic | 50.0% | |
| ATAGACCTAAGGGTCTGCAC+CGG | - | chr1.4:87505168-87505187 | None:intergenic | 50.0% | |
| CCAAGTGGACATCAGCAAAG+AGG | + | chr1.4:87505379-87505398 | MS.gene90859:CDS | 50.0% | |
| CCACATGGTTATGATGGCCA+GGG | + | chr1.4:87507481-87507500 | MS.gene90859:CDS | 50.0% | |
| CCATGTTCGTTTAAGTGGCC+AGG | + | chr1.4:87506753-87506772 | MS.gene90859:CDS | 50.0% | |
| CCTCTTTGCTGATGTCCACT+TGG | - | chr1.4:87505382-87505401 | None:intergenic | 50.0% | |
| CCTGGCCACTTAAACGAACA+TGG | - | chr1.4:87506756-87506775 | None:intergenic | 50.0% | |
| CGAAGAGTAGGATCCATCTC+AGG | - | chr1.4:87507881-87507900 | None:intergenic | 50.0% | |
| CGACTCCAAGATCAGATGCT+CGG | - | chr1.4:87505458-87505477 | None:intergenic | 50.0% | |
| CTCCTCACAAAGCAGTGAAG+AGG | + | chr1.4:87506632-87506651 | MS.gene90859:CDS | 50.0% | |
| CTTCAGGAACTTTGTGGGTC+AGG | + | chr1.4:87504903-87504922 | MS.gene90859:CDS | 50.0% | |
| CTTCCCCTGTCTCGATCATT+TGG | - | chr1.4:87506675-87506694 | None:intergenic | 50.0% | |
| CTTTGCTGATGTCCACTTGG+TGG | - | chr1.4:87505379-87505398 | None:intergenic | 50.0% | |
| GAACCTGTCGCCGTAAAACA+TGG | - | chr1.4:87507964-87507983 | None:intergenic | 50.0% | |
| GAAGAGCCAATGAACATGGG+TGG | + | chr1.4:87509190-87509209 | MS.gene90859:CDS | 50.0% | |
| GACGAGCAGTGTCTATTTGG+AGG | + | chr1.4:87504822-87504841 | MS.gene90859:CDS | 50.0% | |
| GATGAAGTCGGGCTCTATAC+AGG | + | chr1.4:87505591-87505610 | MS.gene90859:CDS | 50.0% | |
| GCAAAGAGGTTTGGGCTTGA+AGG | + | chr1.4:87505393-87505412 | MS.gene90859:CDS | 50.0% | |
| GCCTGTTGCCGTTAATAGTG+TGG | + | chr1.4:87508620-87508639 | MS.gene90859:intron | 50.0% | |
| GGAGAAGATTGAAACCCCTG+CGG | + | chr1.4:87505275-87505294 | MS.gene90859:CDS | 50.0% | |
| GGGCCAGGTTTAACTCATCA+GGG | - | chr1.4:87505062-87505081 | None:intergenic | 50.0% | |
| GGTCTACCAGTGGATGAAGT+CGG | + | chr1.4:87505579-87505598 | MS.gene90859:CDS | 50.0% | |
| GGTGGCAAATCCTAGTCACT+TGG | + | chr1.4:87505692-87505711 | MS.gene90859:CDS | 50.0% | |
| GTCTACCAGTGGATGAAGTC+GGG | + | chr1.4:87505580-87505599 | MS.gene90859:CDS | 50.0% | |
| GTGCCCAAATGATCGAGACA+GGG | + | chr1.4:87506668-87506687 | MS.gene90859:CDS | 50.0% | |
| TAAGCCTAGTAAGCGGCACA+GGG | - | chr1.4:87504783-87504802 | None:intergenic | 50.0% | |
| TACAGGTGCAGCTTGTGCTT+TGG | - | chr1.4:87504755-87504774 | None:intergenic | 50.0% | |
| TCCACATGGTTATGATGGCC+AGG | + | chr1.4:87507480-87507499 | MS.gene90859:CDS | 50.0% | |
| TCCACCTCTCCGAGAATTTC+AGG | + | chr1.4:87504928-87504947 | MS.gene90859:CDS | 50.0% | |
| TGAGCTGTGGTGAGTCTAAG+TGG | + | chr1.4:87507428-87507447 | MS.gene90859:CDS | 50.0% | |
| TGCCCAAATGATCGAGACAG+GGG | + | chr1.4:87506669-87506688 | MS.gene90859:CDS | 50.0% | |
| TGCGAAGATCTGCCTGACTT+GGG | - | chr1.4:87505939-87505958 | None:intergenic | 50.0% | |
| TGGAAGTAACACAACGAGCC+CGG | - | chr1.4:87507464-87507483 | None:intergenic | 50.0% | |
| TGGAGGAGCTTCAAAGAGCA+TGG | + | chr1.4:87504839-87504858 | MS.gene90859:CDS | 50.0% | |
| TGGGACGAGCAGTGTCTATT+TGG | + | chr1.4:87504819-87504838 | MS.gene90859:CDS | 50.0% | |
| TTGCGAAGATCTGCCTGACT+TGG | - | chr1.4:87505940-87505959 | None:intergenic | 50.0% | |
| ! | CGAGAGCTGATGGATGGTTT+CGG | - | chr1.4:87506270-87506289 | None:intergenic | 50.0% |
| ! | CTAGCTCAGTTTGCTCCTTC+TGG | - | chr1.4:87509342-87509361 | None:intergenic | 50.0% |
| ! | GGAGGAGCTTCAAAGAGCAT+GGG | + | chr1.4:87504840-87504859 | MS.gene90859:CDS | 50.0% |
| ! | GGAGGTCAGATTTAGGATGG+TGG | + | chr1.4:87507679-87507698 | MS.gene90859:intron | 50.0% |
| ! | GTGATCTGGGAGGCACAATT+TGG | + | chr1.4:87507364-87507383 | MS.gene90859:CDS | 50.0% |
| ! | TGTCAAAACCAGGGTGTCCT+TGG | - | chr1.4:87508175-87508194 | None:intergenic | 50.0% |
| ! | TTTTGCGAGTTTAGCGGTGG+CGG | + | chr1.4:87505558-87505577 | MS.gene90859:CDS | 50.0% |
| !!! | GGCGTTTTGATTCACGGAGA+TGG | + | chr1.4:87505795-87505814 | MS.gene90859:CDS | 50.0% |
| ACGCTCCCGACTGAATTGTG+TGG | - | chr1.4:87505301-87505320 | None:intergenic | 55.0% | |
| ACTGAATTGTGTGGCCGCAG+GGG | - | chr1.4:87505292-87505311 | None:intergenic | 55.0% | |
| AGTGGCCAGGACGTTGAAAG+AGG | + | chr1.4:87506766-87506785 | MS.gene90859:CDS | 55.0% | |
| ATGTATTCTTCTCCCGCCCC+TGG | - | chr1.4:87505664-87505683 | None:intergenic | 55.0% | |
| CAGCCTCGGTGAACCCATAA+AGG | - | chr1.4:87505083-87505102 | None:intergenic | 55.0% | |
| CCCTGGCCATCATAACCATG+TGG | - | chr1.4:87507484-87507503 | None:intergenic | 55.0% | |
| CGGATACGTGAAAGCTGCTC+AGG | - | chr1.4:87506460-87506479 | None:intergenic | 55.0% | |
| CGGCTCGAGCAAGCTTATTG+TGG | + | chr1.4:87505195-87505214 | MS.gene90859:CDS | 55.0% | |
| CGTGCCCAAATGATCGAGAC+AGG | + | chr1.4:87506667-87506686 | MS.gene90859:CDS | 55.0% | |
| CTGCGGCCACACAATTCAGT+CGG | + | chr1.4:87505292-87505311 | MS.gene90859:CDS | 55.0% | |
| CTTGAGGAAACCAGTAGCCG+TGG | - | chr1.4:87509314-87509333 | None:intergenic | 55.0% | |
| GACTGAATTGTGTGGCCGCA+GGG | - | chr1.4:87505293-87505312 | None:intergenic | 55.0% | |
| GATGATGTCCAAGGACACCC+TGG | + | chr1.4:87508164-87508183 | MS.gene90859:CDS | 55.0% | |
| GCTCCTTCTGGTGAACCTTG+AGG | - | chr1.4:87509330-87509349 | None:intergenic | 55.0% | |
| GGGGGAGAGACTCTTATTCC+TGG | + | chr1.4:87505414-87505433 | MS.gene90859:CDS | 55.0% | |
| GTAAGCCTAGTAAGCGGCAC+AGG | - | chr1.4:87504784-87504803 | None:intergenic | 55.0% | |
| GTCGGGCTCTATACAGGAAC+TGG | + | chr1.4:87505597-87505616 | MS.gene90859:CDS | 55.0% | |
| TACGGCGACAGGTTCGTAGT+TGG | + | chr1.4:87507969-87507988 | MS.gene90859:intron | 55.0% | |
| TAGAGCCCGACTTCATCCAC+TGG | - | chr1.4:87505588-87505607 | None:intergenic | 55.0% | |
| TATGATCGACCAACCAGGGG+CGG | + | chr1.4:87505648-87505667 | MS.gene90859:CDS | 55.0% | |
| TGAGTCTAAGTGGCTGCGTC+AGG | + | chr1.4:87507438-87507457 | MS.gene90859:CDS | 55.0% | |
| TGCAAGCCTTACTGCGAAGC+AGG | - | chr1.4:87508124-87508143 | None:intergenic | 55.0% | |
| TGCGGCCACACAATTCAGTC+GGG | + | chr1.4:87505293-87505312 | MS.gene90859:CDS | 55.0% | |
| ! | AGGGCCCAGAGCATTCAAGT+GGG | + | chr1.4:87507500-87507519 | MS.gene90859:CDS | 55.0% |
| ! | CACGGAGATGGCAGTTTTGC+CGG | + | chr1.4:87505807-87505826 | MS.gene90859:CDS | 55.0% |
| ! | GATGGCAGTTTTGCCGGACA+AGG | + | chr1.4:87505813-87505832 | MS.gene90859:CDS | 55.0% |
| !! | ATTCAGTCGGGAGCGTTGTG+AGG | + | chr1.4:87505305-87505324 | MS.gene90859:CDS | 55.0% |
| !! | CACGGCTACTGGTTTCCTCA+AGG | + | chr1.4:87509312-87509331 | MS.gene90859:CDS | 55.0% |
| ATCGTCCGGTGCAGACCCTT+AGG | + | chr1.4:87505160-87505179 | MS.gene90859:CDS | 60.0% | |
| ATGATCGACCAACCAGGGGC+GGG | + | chr1.4:87505649-87505668 | MS.gene90859:CDS | 60.0% | |
| ATTCTTCTCCCGCCCCTGGT+TGG | - | chr1.4:87505660-87505679 | None:intergenic | 60.0% | |
| CGACTGAATTGTGTGGCCGC+AGG | - | chr1.4:87505294-87505313 | None:intergenic | 60.0% | |
| CGGTGAACCCATAAAGGGCC+AGG | - | chr1.4:87505077-87505096 | None:intergenic | 60.0% | |
| GGCCCTTTATGGGTTCACCG+AGG | + | chr1.4:87505077-87505096 | MS.gene90859:CDS | 60.0% | |
| TCTAAGTGGCTGCGTCAGGC+CGG | + | chr1.4:87507442-87507461 | MS.gene90859:CDS | 60.0% | |
| TGGGTTCACCGAGGCTGATC+TGG | + | chr1.4:87505086-87505105 | MS.gene90859:CDS | 60.0% | |
| ! | CACTTGAATGCTCTGGGCCC+TGG | - | chr1.4:87507501-87507520 | None:intergenic | 60.0% |
| ! | CAGGGCCCAGAGCATTCAAG+TGG | + | chr1.4:87507499-87507518 | MS.gene90859:CDS | 60.0% |
| ACCAGTAGCCGTGGCTGCAG+AGG | - | chr1.4:87509305-87509324 | None:intergenic | 65.0% | |
| CCAGTAGCCGTGGCTGCAGA+GGG | - | chr1.4:87509304-87509323 | None:intergenic | 65.0% | |
| CTAAGTGGCTGCGTCAGGCC+GGG | + | chr1.4:87507443-87507462 | MS.gene90859:CDS | 65.0% | |
| CTAGTAAGCGGCACAGGGCG+AGG | - | chr1.4:87504778-87504797 | None:intergenic | 65.0% | |
| TCGTGCTCCCTCTGCAGCCA+CGG | + | chr1.4:87509294-87509313 | MS.gene90859:CDS | 65.0% | |
| ! | TAGCGGTGGCGGTCTACCAG+TGG | + | chr1.4:87505569-87505588 | MS.gene90859:CDS | 65.0% |
| !! | CTCGCCCTGTGCCGCTTACT+AGG | + | chr1.4:87504776-87504795 | MS.gene90859:CDS | 65.0% |
| AGCGGCACAGGGCGAGGTAC+AGG | - | chr1.4:87504772-87504791 | None:intergenic | 70.0% | |
| CCCTCTGCAGCCACGGCTAC+TGG | + | chr1.4:87509301-87509320 | MS.gene90859:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 87504610 | 87509405 | 87504610 | ID=MS.gene90859 |
| chr1.4 | mRNA | 87504610 | 87509405 | 87504610 | ID=MS.gene90859.t1;Parent=MS.gene90859 |
| chr1.4 | exon | 87504610 | 87506166 | 87504610 | ID=MS.gene90859.t1.exon1;Parent=MS.gene90859.t1 |
| chr1.4 | CDS | 87504610 | 87506166 | 87504610 | ID=cds.MS.gene90859.t1;Parent=MS.gene90859.t1 |
| chr1.4 | exon | 87506262 | 87506488 | 87506262 | ID=MS.gene90859.t1.exon2;Parent=MS.gene90859.t1 |
| chr1.4 | CDS | 87506262 | 87506488 | 87506262 | ID=cds.MS.gene90859.t1;Parent=MS.gene90859.t1 |
| chr1.4 | exon | 87506570 | 87506902 | 87506570 | ID=MS.gene90859.t1.exon3;Parent=MS.gene90859.t1 |
| chr1.4 | CDS | 87506570 | 87506902 | 87506570 | ID=cds.MS.gene90859.t1;Parent=MS.gene90859.t1 |
| chr1.4 | exon | 87507297 | 87507543 | 87507297 | ID=MS.gene90859.t1.exon4;Parent=MS.gene90859.t1 |
| chr1.4 | CDS | 87507297 | 87507543 | 87507297 | ID=cds.MS.gene90859.t1;Parent=MS.gene90859.t1 |
| chr1.4 | exon | 87507851 | 87507979 | 87507851 | ID=MS.gene90859.t1.exon5;Parent=MS.gene90859.t1 |
| chr1.4 | CDS | 87507851 | 87507979 | 87507851 | ID=cds.MS.gene90859.t1;Parent=MS.gene90859.t1 |
| chr1.4 | exon | 87508074 | 87508289 | 87508074 | ID=MS.gene90859.t1.exon6;Parent=MS.gene90859.t1 |
| chr1.4 | CDS | 87508074 | 87508289 | 87508074 | ID=cds.MS.gene90859.t1;Parent=MS.gene90859.t1 |
| chr1.4 | exon | 87508415 | 87508538 | 87508415 | ID=MS.gene90859.t1.exon7;Parent=MS.gene90859.t1 |
| chr1.4 | CDS | 87508415 | 87508538 | 87508415 | ID=cds.MS.gene90859.t1;Parent=MS.gene90859.t1 |
| chr1.4 | exon | 87509167 | 87509405 | 87509167 | ID=MS.gene90859.t1.exon8;Parent=MS.gene90859.t1 |
| chr1.4 | CDS | 87509167 | 87509405 | 87509167 | ID=cds.MS.gene90859.t1;Parent=MS.gene90859.t1 |
| Gene Sequence |
| Protein sequence |
