Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91893.t1 | XP_003613712.1 | 95.2 | 732 | 35 | 0 | 1 | 732 | 1 | 732 | 0.00E+00 | 1377.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91893.t1 | Q9ZVH4 | 74.3 | 732 | 188 | 0 | 1 | 732 | 1 | 732 | 0.0e+00 | 1114.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91893.t1 | G7KDU2 | 95.2 | 732 | 35 | 0 | 1 | 732 | 1 | 732 | 0.0e+00 | 1377.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene91893 | 0.809569 | 1.77E-50 | -1.69E-46 |
MS.gene049350 | MS.gene91893 | 0.805695 | 1.18E-49 | -1.69E-46 |
MS.gene049368 | MS.gene91893 | 0.832316 | 1.01E-55 | -1.69E-46 |
MS.gene050838 | MS.gene91893 | 0.818567 | 1.83E-52 | -1.69E-46 |
MS.gene051234 | MS.gene91893 | 0.803011 | 4.27E-49 | -1.69E-46 |
MS.gene052307 | MS.gene91893 | 0.800822 | 1.20E-48 | -1.69E-46 |
MS.gene052609 | MS.gene91893 | 0.80487 | 1.75E-49 | -1.69E-46 |
MS.gene053143 | MS.gene91893 | 0.80406 | 2.59E-49 | -1.69E-46 |
MS.gene055513 | MS.gene91893 | 0.828319 | 9.60E-55 | -1.69E-46 |
MS.gene056181 | MS.gene91893 | 0.815155 | 1.07E-51 | -1.69E-46 |
MS.gene056308 | MS.gene91893 | 0.810862 | 9.34E-51 | -1.69E-46 |
MS.gene056831 | MS.gene91893 | 0.807822 | 4.19E-50 | -1.69E-46 |
MS.gene058639 | MS.gene91893 | 0.800499 | 1.40E-48 | -1.69E-46 |
MS.gene059170 | MS.gene91893 | 0.810408 | 1.17E-50 | -1.69E-46 |
MS.gene059778 | MS.gene91893 | 0.802615 | 5.16E-49 | -1.69E-46 |
MS.gene060763 | MS.gene91893 | 0.800252 | 1.57E-48 | -1.69E-46 |
MS.gene061006 | MS.gene91893 | 0.801983 | 6.96E-49 | -1.69E-46 |
MS.gene061100 | MS.gene91893 | 0.814289 | 1.66E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91893.t1 | MTR_5g039880 | 95.219 | 732 | 35 | 0 | 1 | 732 | 1 | 732 | 0.0 | 1447 |
MS.gene91893.t1 | MTR_7g039690 | 91.940 | 732 | 35 | 1 | 1 | 732 | 1 | 708 | 0.0 | 1384 |
MS.gene91893.t1 | MTR_8g056030 | 80.738 | 732 | 140 | 1 | 1 | 732 | 1 | 731 | 0.0 | 1241 |
MS.gene91893.t1 | MTR_7g039660 | 75.137 | 732 | 170 | 3 | 1 | 732 | 1 | 720 | 0.0 | 1114 |
MS.gene91893.t1 | MTR_6g011700 | 68.544 | 728 | 205 | 1 | 5 | 732 | 2 | 705 | 0.0 | 1045 |
MS.gene91893.t1 | MTR_6g011770 | 66.071 | 728 | 223 | 1 | 5 | 732 | 2 | 705 | 0.0 | 997 |
MS.gene91893.t1 | MTR_1g040925 | 76.421 | 598 | 123 | 2 | 137 | 732 | 360 | 941 | 0.0 | 931 |
MS.gene91893.t1 | MTR_1g040925 | 72.093 | 344 | 92 | 2 | 11 | 353 | 19 | 359 | 2.29e-165 | 501 |
MS.gene91893.t1 | MTR_1g040995 | 78.544 | 522 | 110 | 1 | 137 | 656 | 360 | 881 | 0.0 | 843 |
MS.gene91893.t1 | MTR_1g040995 | 72.093 | 344 | 92 | 2 | 11 | 353 | 19 | 359 | 6.88e-166 | 500 |
MS.gene91893.t1 | MTR_7g039790 | 52.676 | 710 | 306 | 7 | 28 | 732 | 33 | 717 | 0.0 | 726 |
MS.gene91893.t1 | MTR_5g039770 | 53.687 | 678 | 286 | 6 | 59 | 732 | 1 | 654 | 0.0 | 712 |
MS.gene91893.t1 | MTR_7g445240 | 51.271 | 708 | 303 | 7 | 28 | 732 | 33 | 701 | 0.0 | 694 |
MS.gene91893.t1 | MTR_5g040040 | 62.075 | 530 | 94 | 6 | 203 | 732 | 164 | 586 | 0.0 | 615 |
MS.gene91893.t1 | MTR_5g039890 | 65.510 | 461 | 114 | 2 | 6 | 421 | 3 | 463 | 0.0 | 592 |
MS.gene91893.t1 | MTR_2g019260 | 41.201 | 716 | 400 | 12 | 24 | 732 | 91 | 792 | 3.26e-172 | 514 |
MS.gene91893.t1 | MTR_7g039680 | 66.223 | 376 | 103 | 3 | 6 | 380 | 3 | 355 | 7.35e-169 | 489 |
MS.gene91893.t1 | MTR_2g019260 | 40.497 | 684 | 387 | 12 | 24 | 700 | 91 | 761 | 1.14e-158 | 478 |
MS.gene91893.t1 | MTR_5g040180 | 65.730 | 356 | 119 | 2 | 18 | 371 | 5 | 359 | 4.92e-158 | 462 |
MS.gene91893.t1 | MTR_7g039430 | 64.723 | 343 | 115 | 3 | 18 | 358 | 5 | 343 | 3.07e-144 | 426 |
MS.gene91893.t1 | MTR_5g040190 | 62.391 | 343 | 123 | 3 | 18 | 358 | 5 | 343 | 3.12e-138 | 410 |
MS.gene91893.t1 | MTR_7g039440 | 65.878 | 296 | 100 | 1 | 76 | 371 | 1 | 295 | 4.53e-130 | 388 |
MS.gene91893.t1 | MTR_2g437390 | 34.426 | 732 | 437 | 15 | 32 | 732 | 23 | 742 | 1.50e-125 | 391 |
MS.gene91893.t1 | MTR_7g108340 | 33.873 | 741 | 442 | 14 | 26 | 732 | 9 | 735 | 6.01e-125 | 390 |
MS.gene91893.t1 | MTR_4g119413 | 33.926 | 731 | 442 | 14 | 32 | 732 | 25 | 744 | 1.14e-121 | 381 |
MS.gene91893.t1 | MTR_1g040965 | 79.358 | 218 | 45 | 0 | 515 | 732 | 1 | 218 | 3.24e-120 | 359 |
MS.gene91893.t1 | MTR_7g039380 | 64.623 | 212 | 66 | 2 | 8 | 217 | 2 | 206 | 1.65e-85 | 269 |
MS.gene91893.t1 | MTR_4g119413 | 32.099 | 567 | 350 | 12 | 32 | 568 | 25 | 586 | 1.15e-82 | 275 |
MS.gene91893.t1 | MTR_5g040230 | 71.341 | 164 | 47 | 0 | 54 | 217 | 104 | 267 | 1.43e-73 | 239 |
MS.gene91893.t1 | MTR_5g039820 | 42.683 | 164 | 54 | 2 | 569 | 732 | 1 | 124 | 6.10e-32 | 120 |
MS.gene91893.t1 | MTR_7g039770 | 61.957 | 92 | 35 | 0 | 641 | 732 | 105 | 196 | 7.11e-32 | 123 |
MS.gene91893.t1 | MTR_7g039770 | 54.717 | 106 | 46 | 1 | 464 | 567 | 1 | 106 | 1.35e-31 | 122 |
MS.gene91893.t1 | MTR_7g445230 | 61.957 | 92 | 35 | 0 | 641 | 732 | 105 | 196 | 7.11e-32 | 123 |
MS.gene91893.t1 | MTR_7g445230 | 54.717 | 106 | 46 | 1 | 464 | 567 | 1 | 106 | 1.35e-31 | 122 |
MS.gene91893.t1 | MTR_1g099430 | 40.000 | 115 | 31 | 2 | 618 | 732 | 19 | 95 | 1.47e-16 | 79.3 |
MS.gene91893.t1 | MTR_5g036450 | 54.717 | 53 | 22 | 1 | 1 | 53 | 1 | 51 | 4.54e-11 | 60.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91893.t1 | AT1G26830 | 74.317 | 732 | 188 | 0 | 1 | 732 | 1 | 732 | 0.0 | 1165 |
MS.gene91893.t1 | AT1G69670 | 72.404 | 732 | 202 | 0 | 1 | 732 | 1 | 732 | 0.0 | 1136 |
MS.gene91893.t1 | AT1G69670 | 72.404 | 732 | 202 | 0 | 1 | 732 | 1 | 732 | 0.0 | 1136 |
MS.gene91893.t1 | AT5G46210 | 40.460 | 739 | 418 | 13 | 1 | 732 | 69 | 792 | 3.32e-165 | 496 |
MS.gene91893.t1 | AT4G02570 | 34.318 | 711 | 423 | 13 | 52 | 732 | 42 | 738 | 4.14e-125 | 390 |
MS.gene91893.t1 | AT4G02570 | 34.318 | 711 | 423 | 13 | 52 | 732 | 42 | 738 | 4.14e-125 | 390 |
MS.gene91893.t1 | AT4G02570 | 34.318 | 711 | 423 | 13 | 52 | 732 | 42 | 738 | 4.14e-125 | 390 |
MS.gene91893.t1 | AT4G02570 | 34.318 | 711 | 423 | 13 | 52 | 732 | 42 | 738 | 4.14e-125 | 390 |
MS.gene91893.t1 | AT1G02980 | 32.263 | 716 | 436 | 15 | 51 | 732 | 42 | 742 | 1.76e-108 | 347 |
MS.gene91893.t1 | AT1G02980 | 32.263 | 716 | 436 | 15 | 51 | 732 | 42 | 742 | 1.76e-108 | 347 |
MS.gene91893.t1 | AT1G43140 | 32.670 | 704 | 418 | 15 | 52 | 732 | 51 | 721 | 3.00e-101 | 327 |
MS.gene91893.t1 | AT1G59790 | 27.134 | 328 | 215 | 9 | 52 | 366 | 48 | 364 | 2.47e-26 | 112 |
MS.gene91893.t1 | AT1G59790 | 26.708 | 322 | 212 | 9 | 51 | 359 | 47 | 357 | 2.07e-24 | 106 |
MS.gene91893.t1 | AT1G59800 | 25.980 | 204 | 145 | 3 | 52 | 251 | 43 | 244 | 1.29e-17 | 84.0 |
MS.gene91893.t1 | AT4G12100 | 22.253 | 364 | 237 | 11 | 24 | 368 | 76 | 412 | 1.52e-16 | 83.2 |
Find 163 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GATTTAGGTCCTTCTGTTTA+TGG | 0.117167 | 5.3:+27940568 | MS.gene91893:CDS |
ACAGGATCCTTCAACCTTTC+AGG | 0.147657 | 5.3:-27940979 | None:intergenic |
AATATGGTTCTTCACAAATT+TGG | 0.179774 | 5.3:+27940184 | MS.gene91893:CDS |
CACTCAAGGAAGTTCCTTTC+TGG | 0.187285 | 5.3:+27940279 | MS.gene91893:CDS |
TTTATTGAGTGCTGTGGTTC+TGG | 0.191669 | 5.3:+27940655 | MS.gene91893:CDS |
TCGACTGTTGAATATGCTTT+TGG | 0.245448 | 5.3:+27940471 | MS.gene91893:CDS |
ATTGACGTGGCAAACTAATA+TGG | 0.248034 | 5.3:+27941614 | MS.gene91893:CDS |
ACGTCAATTTCCTGCCATTA+TGG | 0.248558 | 5.3:-27941599 | None:intergenic |
ATTCAACAAGATTATAGATT+TGG | 0.266006 | 5.3:+27941038 | MS.gene91893:CDS |
TTAATCTATAAGGAGTCTTC+TGG | 0.270183 | 5.3:+27940811 | MS.gene91893:CDS |
ACAAAGATGCTAATGGATTT+AGG | 0.270929 | 5.3:+27940553 | MS.gene91893:CDS |
TTAGCTTTGAAGAGCTTTAC+AGG | 0.270979 | 5.3:+27937478 | MS.gene91893:CDS |
TGATGATAAATATGAAGATT+TGG | 0.279943 | 5.3:+27940852 | MS.gene91893:CDS |
TCACTATTGCTGCTTCAATC+TGG | 0.281451 | 5.3:-27942007 | None:intergenic |
GTTGTGCTCAAGTTGCTTCC+TGG | 0.283417 | 5.3:-27942042 | None:intergenic |
CACTATTGCTGCTTCAATCT+GGG | 0.291769 | 5.3:-27942006 | None:intergenic |
CAGCACTTTGCGAGAAATTT+CGG | 0.292111 | 5.3:+27941559 | MS.gene91893:CDS |
ATAAACAGTTGTCTTCTTGA+TGG | 0.293373 | 5.3:-27940392 | None:intergenic |
GCAGACTTAAAAGCTACTTT+TGG | 0.295841 | 5.3:+27941642 | MS.gene91893:CDS |
TTCTTTACATCCGTTGGATT+TGG | 0.302500 | 5.3:-27942110 | None:intergenic |
GCAATCATTGGCTTTGGTTA+AGG | 0.303138 | 5.3:+27941803 | MS.gene91893:CDS |
TCAACAGTCGAGTCCTTATC+TGG | 0.305371 | 5.3:-27940459 | None:intergenic |
TCTCCTTGAGCGGGAATTCT+TGG | 0.308975 | 5.3:+27942145 | MS.gene91893:CDS |
CGTCAATTTCCTGCCATTAT+GGG | 0.309194 | 5.3:-27941598 | None:intergenic |
GGAATCGGAACTGGAGAAAC+TGG | 0.315369 | 5.3:+27941950 | MS.gene91893:CDS |
CCAATTTACCGCAAAATTAG+AGG | 0.325857 | 5.3:+27941377 | MS.gene91893:CDS |
ATGAGGAATTCAGATCTTTC+AGG | 0.328092 | 5.3:-27941083 | None:intergenic |
ACAAGGTTATGGTTCTATTT+CGG | 0.330710 | 5.3:+27941223 | MS.gene91893:CDS |
GTAATCTTCGTTTCAGTTCC+AGG | 0.340515 | 5.3:-27940745 | None:intergenic |
TGATAAAACTTGGATCATTC+TGG | 0.345686 | 5.3:+27937413 | MS.gene91893:CDS |
ATTTAGGTCCTTCTGTTTAT+GGG | 0.347103 | 5.3:+27940569 | MS.gene91893:CDS |
CAATCATTGGCTTTGGTTAA+GGG | 0.347835 | 5.3:+27941804 | MS.gene91893:CDS |
CAGTTGTCTTCTTGATGGTT+TGG | 0.350870 | 5.3:-27940387 | None:intergenic |
AAGCTTCAACTGAGTTCTAT+AGG | 0.353571 | 5.3:+27940617 | MS.gene91893:CDS |
CATGCTTAGATTAATCTATA+AGG | 0.358765 | 5.3:+27940801 | MS.gene91893:CDS |
CGCGAAAATTCCTCTTCCTT+GGG | 0.361595 | 5.3:-27937347 | None:intergenic |
ACGCGAAAATTCCTCTTCCT+TGG | 0.366742 | 5.3:-27937348 | None:intergenic |
GATTACCCTTGACAAGGTTA+TGG | 0.368294 | 5.3:+27941212 | MS.gene91893:CDS |
TGGAAGAATTAAACAGAAAG+TGG | 0.370300 | 5.3:+27940299 | MS.gene91893:CDS |
GATGATAAATATGAAGATTT+GGG | 0.381206 | 5.3:+27940853 | MS.gene91893:CDS |
AATGCCAACCACCCTGAGTT+AGG | 0.388456 | 5.3:+27941447 | MS.gene91893:CDS |
TCAGTTGAAGCTTGCAGAAA+AGG | 0.388471 | 5.3:-27940607 | None:intergenic |
GGTTCTATTTCGGTATTTGC+AGG | 0.389752 | 5.3:+27941233 | MS.gene91893:CDS |
TTATTGAGTGCTGTGGTTCT+GGG | 0.394402 | 5.3:+27940656 | MS.gene91893:CDS |
GTGCCTGCAATCATTGGCTT+TGG | 0.396338 | 5.3:+27941797 | MS.gene91893:CDS |
ACTGTGCAGGTTCTGACAAC+AGG | 0.396783 | 5.3:+27941486 | MS.gene91893:CDS |
ATCCGTTTCTTTACATCCGT+TGG | 0.402613 | 5.3:-27942116 | None:intergenic |
CGAGGTATGGTGATAAAACT+TGG | 0.413055 | 5.3:+27937403 | MS.gene91893:CDS |
ACTTGAGCACAACAATCTTA+TGG | 0.413342 | 5.3:+27942052 | MS.gene91893:CDS |
GAAGAGGTGCCTGCAATCAT+TGG | 0.418942 | 5.3:+27941791 | MS.gene91893:CDS |
AGGAACTGTTGTTGCACAAA+AGG | 0.420428 | 5.3:+27941929 | MS.gene91893:CDS |
TAACCAAAGCCAATGATTGC+AGG | 0.428278 | 5.3:-27941800 | None:intergenic |
AAGACAACTGTTTATGAACT+TGG | 0.439174 | 5.3:+27940400 | MS.gene91893:CDS |
AGCTTCAACTGAGTTCTATA+GGG | 0.452068 | 5.3:+27940618 | MS.gene91893:CDS |
ACGTGTAACAAAGATGCTAA+TGG | 0.453638 | 5.3:+27940546 | MS.gene91893:CDS |
TCTGTTTAATTCTTCCAGAA+AGG | 0.455958 | 5.3:-27940293 | None:intergenic |
AGCCTCTGCACAAATTCAAC+AGG | 0.456083 | 5.3:-27940997 | None:intergenic |
GTGAAATGTACTCTGGAATA+CGG | 0.457810 | 5.3:-27941131 | None:intergenic |
TGCACAAAAGGAATCGGAAC+TGG | 0.458457 | 5.3:+27941941 | MS.gene91893:CDS |
CATGAGTACACACATTTGAT+AGG | 0.461173 | 5.3:-27941697 | None:intergenic |
ATATAGGAATGCTTACAATA+TGG | 0.464480 | 5.3:+27940168 | MS.gene91893:intron |
TTCTTCATTCAAACCAGATA+AGG | 0.468077 | 5.3:+27940446 | MS.gene91893:CDS |
AAGCTTCGAAAAGGTCTAAA+GGG | 0.471351 | 5.3:+27941168 | MS.gene91893:CDS |
TACTGATCCTGAAAGGTTGA+AGG | 0.474245 | 5.3:+27940972 | MS.gene91893:CDS |
TAATCTATAAGGAGTCTTCT+GGG | 0.474589 | 5.3:+27940812 | MS.gene91893:CDS |
TGATAGAGTGAGCCACTACT+TGG | 0.476648 | 5.3:+27940720 | MS.gene91893:CDS |
CAACAGATCTAGCCATCTCT+TGG | 0.478016 | 5.3:-27940252 | None:intergenic |
TGAAATGTACTCTGGAATAC+GGG | 0.483088 | 5.3:-27941130 | None:intergenic |
AAAGTGGGATGACCACAATA+AGG | 0.483530 | 5.3:+27940315 | MS.gene91893:CDS |
CACCTCTTCAAATCTGATGC+TGG | 0.488180 | 5.3:-27941777 | None:intergenic |
TTGACGTGGCAAACTAATAT+GGG | 0.489497 | 5.3:+27941615 | MS.gene91893:CDS |
TACCCACAGGCTCCTTCCTA+AGG | 0.495503 | 5.3:-27941836 | None:intergenic |
GTAGGACCATCGCCTAACTC+AGG | 0.500013 | 5.3:-27941459 | None:intergenic |
CAGAAAGGAACTTCCTTGAG+TGG | 0.500983 | 5.3:-27940278 | None:intergenic |
TTAAGGGAAGAAATGTCCTT+AGG | 0.501041 | 5.3:+27941820 | MS.gene91893:CDS |
ACACATTCTATGTTAATGAC+AGG | 0.505783 | 5.3:+27941877 | MS.gene91893:CDS |
TAAGCTTCGAAAAGGTCTAA+AGG | 0.508584 | 5.3:+27941167 | MS.gene91893:CDS |
CAGTTCCAGGGTCCAAGTAG+TGG | 0.509512 | 5.3:-27940732 | None:intergenic |
TAGTGAGGATTATGAAATCC+AGG | 0.510423 | 5.3:+27942024 | MS.gene91893:CDS |
TATTACCTCAGCACCCATAA+TGG | 0.510591 | 5.3:+27941585 | MS.gene91893:CDS |
AGGTTCTGACAACAGGGTCT+TGG | 0.511218 | 5.3:+27941493 | MS.gene91893:CDS |
GGCTGAGATGCGTCTGAATG+AGG | 0.515956 | 5.3:+27940693 | MS.gene91893:CDS |
GATTACTACTCTGGTGGAGA+AGG | 0.517289 | 5.3:+27940762 | MS.gene91893:CDS |
TAATCTTCGTTTCAGTTCCA+GGG | 0.519743 | 5.3:-27940744 | None:intergenic |
TGTTGTTGCACAAAAGGAAT+CGG | 0.522411 | 5.3:+27941935 | MS.gene91893:CDS |
AGATGAGTAACCCAAGGAAG+AGG | 0.525328 | 5.3:+27937337 | None:intergenic |
CAGACAAAAGCCGCTTTGCA+AGG | 0.528971 | 5.3:-27941290 | None:intergenic |
ATCCAACGGATGTAAAGAAA+CGG | 0.530115 | 5.3:+27942114 | MS.gene91893:CDS |
ACTATTGCTGCTTCAATCTG+GGG | 0.530507 | 5.3:-27942005 | None:intergenic |
TTTCCAAGAATTCCCGCTCA+AGG | 0.532596 | 5.3:-27942148 | None:intergenic |
ACCGGCGAAGTTGTTAATAG+AGG | 0.533572 | 5.3:+27940514 | MS.gene91893:CDS |
AGGTCTAAAGGGAGTTAGTG+AGG | 0.534609 | 5.3:+27941179 | MS.gene91893:CDS |
CAGATATTTATTGAGTGCTG+TGG | 0.538710 | 5.3:+27940649 | MS.gene91893:CDS |
TTACATCCGTTGGATTTGGA+AGG | 0.539177 | 5.3:-27942106 | None:intergenic |
TTTAGGTCCTTCTGTTTATG+GGG | 0.542075 | 5.3:+27940570 | MS.gene91893:CDS |
ACAAAGAGTGAAATGTACTC+TGG | 0.543670 | 5.3:-27941138 | None:intergenic |
ACCTCAGCACCCATAATGGC+AGG | 0.544192 | 5.3:+27941589 | MS.gene91893:CDS |
AACTTGTTCAGTCGTGTCAC+CGG | 0.544635 | 5.3:+27940886 | MS.gene91893:CDS |
GTGAGCCACTACTTGGACCC+TGG | 0.545452 | 5.3:+27940727 | MS.gene91893:CDS |
CGAGAGGCTATACTCTGGGC+TGG | 0.546564 | 5.3:+27940207 | MS.gene91893:CDS |
GTAGACGATAAGCTTCGAAA+AGG | 0.549522 | 5.3:+27941159 | MS.gene91893:CDS |
GATTGAGTCTCTCCTTGAGC+GGG | 0.549775 | 5.3:+27942136 | MS.gene91893:CDS |
ACATTCTGATGTACATGGAC+AGG | 0.551895 | 5.3:+27940356 | MS.gene91893:CDS |
TGAAACGAAGATTACTACTC+TGG | 0.553950 | 5.3:+27940753 | MS.gene91893:CDS |
ATTTATGATCATAATGCTAG+TGG | 0.555562 | 5.3:+27937453 | MS.gene91893:CDS |
TTCCAGCATCAGATTTGAAG+AGG | 0.558511 | 5.3:+27941775 | MS.gene91893:CDS |
TCCTGCCATTATGGGTGCTG+AGG | 0.559850 | 5.3:-27941590 | None:intergenic |
GTGCTGACATTTCTGTCGGA+AGG | 0.563439 | 5.3:-27941542 | None:intergenic |
CAATTTACCGCAAAATTAGA+GGG | 0.563610 | 5.3:+27941378 | MS.gene91893:CDS |
TGGTCCTACACTAACTGTGC+AGG | 0.566945 | 5.3:+27941473 | MS.gene91893:CDS |
TCATTTGTAATGCCTTATTG+TGG | 0.567815 | 5.3:-27940327 | None:intergenic |
ATCGCCTAACTCAGGGTGGT+TGG | 0.569183 | 5.3:-27941451 | None:intergenic |
CTCTTGGAGATGAGAAGTCA+TGG | 0.572652 | 5.3:-27940236 | None:intergenic |
TGCTGATAGACTAAGCTACA+AGG | 0.574564 | 5.3:+27941731 | MS.gene91893:CDS |
TCCTCTATTAACAACTTCGC+CGG | 0.574652 | 5.3:-27940515 | None:intergenic |
TGTCCTTAGGAAGGAGCCTG+TGG | 0.575541 | 5.3:+27941833 | MS.gene91893:CDS |
GACTTCTCATCTCCAAGAGA+TGG | 0.576415 | 5.3:+27940240 | MS.gene91893:CDS |
CAAAGTGCTGACATTTCTGT+CGG | 0.576497 | 5.3:-27941546 | None:intergenic |
TATTGAGTGCTGTGGTTCTG+GGG | 0.577754 | 5.3:+27940657 | MS.gene91893:CDS |
GGGAAGAAATGTCCTTAGGA+AGG | 0.582948 | 5.3:+27941824 | MS.gene91893:CDS |
TTCTTCACAAATTTGGCGAG+AGG | 0.583661 | 5.3:+27940191 | MS.gene91893:CDS |
TTGGCGAGAGGCTATACTCT+GGG | 0.583670 | 5.3:+27940203 | MS.gene91893:CDS |
GGAAGAATTAAACAGAAAGT+GGG | 0.584845 | 5.3:+27940300 | MS.gene91893:CDS |
TTTGGCGAGAGGCTATACTC+TGG | 0.586097 | 5.3:+27940202 | MS.gene91893:CDS |
ATAAATATGAAGATTTGGGT+AGG | 0.586773 | 5.3:+27940857 | MS.gene91893:CDS |
TAGAGACATTCTGATGTACA+TGG | 0.588793 | 5.3:+27940351 | MS.gene91893:CDS |
AGATCTGTTGAAGCCACTCA+AGG | 0.592937 | 5.3:+27940265 | MS.gene91893:CDS |
AGAAGAAGATGAGTAACCCA+AGG | 0.593480 | 5.3:+27937331 | None:intergenic |
ACTTCATACGTCAAAGACTA+CGG | 0.595144 | 5.3:+27940937 | MS.gene91893:CDS |
GCACAACAATCTTATGGCTG+AGG | 0.595338 | 5.3:+27942058 | MS.gene91893:CDS |
ATGAACTTGGTCAGAACCTG+TGG | 0.595675 | 5.3:+27940413 | MS.gene91893:CDS |
TTCTGGGGATTATCTCAAGA+AGG | 0.597654 | 5.3:+27940672 | MS.gene91893:CDS |
ATAGAACCATAACCTTGTCA+AGG | 0.597746 | 5.3:-27941218 | None:intergenic |
GTTGTAATGGATCCGAGGTA+TGG | 0.601802 | 5.3:+27937390 | MS.gene91893:CDS |
AGCTTGTTACTGATCCTGAA+AGG | 0.602699 | 5.3:+27940965 | MS.gene91893:CDS |
AACCACCCTGAGTTAGGCGA+TGG | 0.606334 | 5.3:+27941453 | MS.gene91893:CDS |
AATTCTTCCCCATAAACAGA+AGG | 0.608454 | 5.3:-27940577 | None:intergenic |
AACGAAGATTACTACTCTGG+TGG | 0.609690 | 5.3:+27940756 | MS.gene91893:CDS |
TGCAGAGATTACCCTTGACA+AGG | 0.610325 | 5.3:+27941206 | MS.gene91893:CDS |
TCGCAAACATCTTTACCCAC+AGG | 0.610963 | 5.3:-27941849 | None:intergenic |
TTAGTACACAGTGAGCGTAC+CGG | 0.613443 | 5.3:+27940496 | MS.gene91893:CDS |
TACTCTGGTGGAGAAGGAGA+TGG | 0.615285 | 5.3:+27940768 | MS.gene91893:CDS |
TAGAACCATAACCTTGTCAA+GGG | 0.616816 | 5.3:-27941217 | None:intergenic |
CATGTCACACTAGATTGAGC+TGG | 0.619728 | 5.3:-27941516 | None:intergenic |
GTTAAGCTGAAGACAGAATG+TGG | 0.624729 | 5.3:+27941351 | MS.gene91893:CDS |
GAGTACACACATTTGATAGG+TGG | 0.629808 | 5.3:-27941694 | None:intergenic |
ACAAGCAGCACCTTGCAAAG+CGG | 0.644467 | 5.3:+27941280 | MS.gene91893:CDS |
TTGTTCAGTCGTGTCACCGG+TGG | 0.648925 | 5.3:+27940889 | MS.gene91893:CDS |
TAGGACCATCGCCTAACTCA+GGG | 0.650482 | 5.3:-27941458 | None:intergenic |
GGATTGAGTCTCTCCTTGAG+CGG | 0.650864 | 5.3:+27942135 | MS.gene91893:CDS |
ATCCTGTTGAATTTGTGCAG+AGG | 0.652724 | 5.3:+27940995 | MS.gene91893:CDS |
GCGATTCCTTCCAAATCCAA+CGG | 0.655030 | 5.3:+27942100 | MS.gene91893:CDS |
CTGTGCAGGTTCTGACAACA+GGG | 0.655678 | 5.3:+27941487 | MS.gene91893:CDS |
GTCCTTAGGAAGGAGCCTGT+GGG | 0.656948 | 5.3:+27941834 | MS.gene91893:CDS |
AGAACCTGCACAGTTAGTGT+AGG | 0.658313 | 5.3:-27941477 | None:intergenic |
CAGTTTCTGATGATGCTGAG+AGG | 0.661049 | 5.3:+27941319 | MS.gene91893:CDS |
AGATTGAAGCAGCAATAGTG+AGG | 0.663820 | 5.3:+27942009 | MS.gene91893:CDS |
ATGTGGTTGTAATGGATCCG+AGG | 0.669826 | 5.3:+27937385 | MS.gene91893:CDS |
GAAATGTACTCTGGAATACG+GGG | 0.691252 | 5.3:-27941129 | None:intergenic |
GACCATCGCCTAACTCAGGG+TGG | 0.727453 | 5.3:-27941455 | None:intergenic |
TGTGGGTAAAGATGTTTGCG+AGG | 0.737739 | 5.3:+27941851 | MS.gene91893:CDS |
ATAATGGCAGGAAATTGACG+TGG | 0.739143 | 5.3:+27941601 | MS.gene91893:CDS |
TTGGAGATGAGAAGTCATGG+TGG | 0.753515 | 5.3:-27940233 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAGATGTAAATTATATTA+TGG | + | chr5.3:27939456-27939475 | MS.gene91893:intron | 10.0% |
!! | AAAATAATTAAGATGTTATA+TGG | - | chr5.3:27939112-27939131 | None:intergenic | 10.0% |
!! | ATTCAAATAAAATTCTAATT+TGG | - | chr5.3:27939521-27939540 | None:intergenic | 10.0% |
!! | TTCTATAAACTATTAAATAA+AGG | - | chr5.3:27940003-27940022 | None:intergenic | 10.0% |
!!! | AAAACTTTTTTTTTAAAACT+CGG | - | chr5.3:27937711-27937730 | None:intergenic | 10.0% |
!!! | ACTATTTTATTTTCATTATT+AGG | - | chr5.3:27939839-27939858 | None:intergenic | 10.0% |
!! | AAACTGTATAAGATAAAAAT+AGG | + | chr5.3:27941909-27941928 | MS.gene91893:CDS | 15.0% |
!! | TACTTTATTGTCTTTATTAT+GGG | + | chr5.3:27940107-27940126 | MS.gene91893:intron | 15.0% |
!! | TTAAAAACAAGCTAAATAAT+TGG | - | chr5.3:27937605-27937624 | None:intergenic | 15.0% |
!! | TTTAGTCAAATAGAAAATTA+GGG | - | chr5.3:27938494-27938513 | None:intergenic | 15.0% |
!!! | AGTTAAATTGTTTTCATATA+TGG | - | chr5.3:27938019-27938038 | None:intergenic | 15.0% |
!!! | CTTGTTTTATAAGATATATA+GGG | + | chr5.3:27937872-27937891 | MS.gene91893:intron | 15.0% |
!!! | CTTGTTTTTAATGATATATA+GGG | + | chr5.3:27937614-27937633 | MS.gene91893:intron | 15.0% |
!!! | TGATTTCTATTATTTGTTAT+TGG | + | chr5.3:27937513-27937532 | MS.gene91893:intron | 15.0% |
!!! | TTGTATTAATATCTGAAATA+TGG | - | chr5.3:27939142-27939161 | None:intergenic | 15.0% |
!! | AAATAAGTCACATAAGTTAA+CGG | - | chr5.3:27938718-27938737 | None:intergenic | 20.0% |
!! | AAGCAAAAAATTTCAATCTT+AGG | + | chr5.3:27938159-27938178 | MS.gene91893:intron | 20.0% |
!! | ACATAAAAAAGTTAATTGCT+AGG | - | chr5.3:27939193-27939212 | None:intergenic | 20.0% |
!! | AGCAAAAAATTTCAATCTTA+GGG | + | chr5.3:27938160-27938179 | MS.gene91893:intron | 20.0% |
!! | ATTCAACAAGATTATAGATT+TGG | + | chr5.3:27941038-27941057 | MS.gene91893:CDS | 20.0% |
!! | CCTATATATCTTATAAAACA+AGG | - | chr5.3:27937874-27937893 | None:intergenic | 20.0% |
!! | CTTTAGTCAAATAGAAAATT+AGG | - | chr5.3:27938495-27938514 | None:intergenic | 20.0% |
!! | GATGATAAATATGAAGATTT+GGG | + | chr5.3:27940853-27940872 | MS.gene91893:CDS | 20.0% |
!! | GTACTTTATTGTCTTTATTA+TGG | + | chr5.3:27940106-27940125 | MS.gene91893:intron | 20.0% |
!! | TAAACTATTAAATAAAGGAG+AGG | - | chr5.3:27939998-27940017 | None:intergenic | 20.0% |
!! | TGATGATAAATATGAAGATT+TGG | + | chr5.3:27940852-27940871 | MS.gene91893:CDS | 20.0% |
!! | TGATTTCAAAAAGGAAAATA+GGG | + | chr5.3:27939059-27939078 | MS.gene91893:intron | 20.0% |
!! | TTGATTTCAAAAAGGAAAAT+AGG | + | chr5.3:27939058-27939077 | MS.gene91893:intron | 20.0% |
!!! | AGGAAGTATTAAATGTTTTT+AGG | - | chr5.3:27939298-27939317 | None:intergenic | 20.0% |
!!! | CCTTGTTTTATAAGATATAT+AGG | + | chr5.3:27937871-27937890 | MS.gene91893:intron | 20.0% |
!!! | CTTTTAAACCAATAATTAGA+TGG | + | chr5.3:27939913-27939932 | MS.gene91893:intron | 20.0% |
!!! | GCTTGTTTTTAATGATATAT+AGG | + | chr5.3:27937613-27937632 | MS.gene91893:intron | 20.0% |
!!! | GGTTTTTATAATGATCAAAT+TGG | + | chr5.3:27938127-27938146 | MS.gene91893:intron | 20.0% |
!!! | GTTTTCAAAACATTTTCATA+AGG | + | chr5.3:27938417-27938436 | MS.gene91893:intron | 20.0% |
!!! | TAAGTTGTTTTATTTGTTGT+TGG | + | chr5.3:27937779-27937798 | MS.gene91893:intron | 20.0% |
!!! | TATTTTTCATCTTTATCTTG+TGG | + | chr5.3:27940145-27940164 | MS.gene91893:intron | 20.0% |
!!! | TGAAAATGTTTTGAAAACTA+TGG | - | chr5.3:27938415-27938434 | None:intergenic | 20.0% |
! | AATATGGTTCTTCACAAATT+TGG | + | chr5.3:27940184-27940203 | MS.gene91893:CDS | 25.0% |
! | AATCTTAGGGTTTATTACTT+TGG | + | chr5.3:27938173-27938192 | MS.gene91893:intron | 25.0% |
! | AATGATATATAGGGTTTGAT+TGG | + | chr5.3:27937623-27937642 | MS.gene91893:intron | 25.0% |
! | ATAAATATGAAGATTTGGGT+AGG | + | chr5.3:27940857-27940876 | MS.gene91893:CDS | 25.0% |
! | ATAATGTCTATGTGCAAATA+GGG | + | chr5.3:27939620-27939639 | MS.gene91893:intron | 25.0% |
! | ATATAGGAATGCTTACAATA+TGG | + | chr5.3:27940168-27940187 | MS.gene91893:intron | 25.0% |
! | ATATGTATAGTTAACACAGA+TGG | - | chr5.3:27938952-27938971 | None:intergenic | 25.0% |
! | ATTTATGATCATAATGCTAG+TGG | + | chr5.3:27937453-27937472 | MS.gene91893:CDS | 25.0% |
! | CATGCTTAGATTAATCTATA+AGG | + | chr5.3:27940801-27940820 | MS.gene91893:CDS | 25.0% |
! | GTTAATGAAAAATTCGAATG+AGG | - | chr5.3:27941103-27941122 | None:intergenic | 25.0% |
! | TATAATGTCTATGTGCAAAT+AGG | + | chr5.3:27939619-27939638 | MS.gene91893:intron | 25.0% |
! | TATGACAATAAGTGATTTGA+AGG | - | chr5.3:27938444-27938463 | None:intergenic | 25.0% |
! | TTATGATAAGATGTCATGTT+TGG | + | chr5.3:27938903-27938922 | MS.gene91893:intron | 25.0% |
!! | ATGAATCTATTTTACCCAAA+CGG | + | chr5.3:27938572-27938591 | MS.gene91893:intron | 25.0% |
!! | ATGTATTTGAGCTTGTTTAT+TGG | + | chr5.3:27937650-27937669 | MS.gene91893:intron | 25.0% |
!! | GCAATTGAAATGTTTTCTTT+GGG | - | chr5.3:27939594-27939613 | None:intergenic | 25.0% |
!! | TGCAATTGAAATGTTTTCTT+TGG | - | chr5.3:27939595-27939614 | None:intergenic | 25.0% |
!!! | TGGAAGAAGGATTTTTTTTA+GGG | + | chr5.3:27938242-27938261 | MS.gene91893:intron | 25.0% |
!!! | TTGAAATTTTTTGCTTTCCT+AGG | - | chr5.3:27938155-27938174 | None:intergenic | 25.0% |
!!! | TTGTCATTGGATTTTTTTCA+GGG | + | chr5.3:27938105-27938124 | MS.gene91893:intron | 25.0% |
!!! | TTTTATTTGTTGTTGGTTCT+TGG | + | chr5.3:27937786-27937805 | MS.gene91893:intron | 25.0% |
AAAAACTCCAACCAAGAAAA+CGG | - | chr5.3:27939004-27939023 | None:intergenic | 30.0% | |
AAAAAGTTAATTGCTAGGTC+TGG | - | chr5.3:27939188-27939207 | None:intergenic | 30.0% | |
AAGACAACTGTTTATGAACT+TGG | + | chr5.3:27940400-27940419 | MS.gene91893:CDS | 30.0% | |
AAGCAAATTCTATCGTTCTT+TGG | + | chr5.3:27938761-27938780 | MS.gene91893:intron | 30.0% | |
ACACATTCTATGTTAATGAC+AGG | + | chr5.3:27941877-27941896 | MS.gene91893:CDS | 30.0% | |
AGCAAATTCTATCGTTCTTT+GGG | + | chr5.3:27938762-27938781 | MS.gene91893:intron | 30.0% | |
ATAAACAGTTGTCTTCTTGA+TGG | - | chr5.3:27940395-27940414 | None:intergenic | 30.0% | |
ATGACAACTAACTACAACTA+TGG | - | chr5.3:27938092-27938111 | None:intergenic | 30.0% | |
ATTAGAGAAAAGTCGATGTA+AGG | + | chr5.3:27939493-27939512 | MS.gene91893:intron | 30.0% | |
ATTTAACTGATAAGCACTTG+TGG | + | chr5.3:27938031-27938050 | MS.gene91893:intron | 30.0% | |
ATTTAGGTCCTTCTGTTTAT+GGG | + | chr5.3:27940569-27940588 | MS.gene91893:CDS | 30.0% | |
CAATTTACCGCAAAATTAGA+GGG | + | chr5.3:27941378-27941397 | MS.gene91893:CDS | 30.0% | |
CATCTTTATCTTGTGGATAT+AGG | + | chr5.3:27940152-27940171 | MS.gene91893:intron | 30.0% | |
GACACACATGTCATAATATA+AGG | - | chr5.3:27938822-27938841 | None:intergenic | 30.0% | |
GAGCTTATTTGCTTATGTTA+TGG | + | chr5.3:27938208-27938227 | MS.gene91893:intron | 30.0% | |
GCATATTTGAGCTTATTTAC+TGG | + | chr5.3:27937908-27937927 | MS.gene91893:intron | 30.0% | |
GGAAGAATTAAACAGAAAGT+GGG | + | chr5.3:27940300-27940319 | MS.gene91893:CDS | 30.0% | |
TAAGATATATAGGGTCTGAT+TGG | + | chr5.3:27937881-27937900 | MS.gene91893:intron | 30.0% | |
TAATCTATAAGGAGTCTTCT+GGG | + | chr5.3:27940812-27940831 | MS.gene91893:CDS | 30.0% | |
TAGTTGTAGTTAGTTGTCAT+TGG | + | chr5.3:27938092-27938111 | MS.gene91893:intron | 30.0% | |
TATTATGCTGATCAAGTAGA+AGG | + | chr5.3:27939339-27939358 | MS.gene91893:intron | 30.0% | |
TCTGTTTAATTCTTCCAGAA+AGG | - | chr5.3:27940296-27940315 | None:intergenic | 30.0% | |
TGATAAAACTTGGATCATTC+TGG | + | chr5.3:27937413-27937432 | MS.gene91893:CDS | 30.0% | |
TGCATCTACCATCTAATTAT+TGG | - | chr5.3:27939924-27939943 | None:intergenic | 30.0% | |
TGCTTTCATATGCACAAATT+TGG | - | chr5.3:27938746-27938765 | None:intergenic | 30.0% | |
TGGAAGAATTAAACAGAAAG+TGG | + | chr5.3:27940299-27940318 | MS.gene91893:CDS | 30.0% | |
TTAAATATTGAATGCCAGCT+TGG | - | chr5.3:27939240-27939259 | None:intergenic | 30.0% | |
TTAATCTATAAGGAGTCTTC+TGG | + | chr5.3:27940811-27940830 | MS.gene91893:CDS | 30.0% | |
TTCTTCACTCTTATGAACTA+TGG | + | chr5.3:27938857-27938876 | MS.gene91893:intron | 30.0% | |
TTCTTCATTCAAACCAGATA+AGG | + | chr5.3:27940446-27940465 | MS.gene91893:CDS | 30.0% | |
! | ACAAGGTTATGGTTCTATTT+CGG | + | chr5.3:27941223-27941242 | MS.gene91893:CDS | 30.0% |
! | TCATTTGTAATGCCTTATTG+TGG | - | chr5.3:27940330-27940349 | None:intergenic | 30.0% |
! | TGAATCTATTTTACCCAAAC+GGG | + | chr5.3:27938573-27938592 | MS.gene91893:intron | 30.0% |
! | TTTTAAGCATGTGGTTGTAA+TGG | + | chr5.3:27937377-27937396 | MS.gene91893:CDS | 30.0% |
!! | AAAAGTTTTGTGACACTGTT+TGG | + | chr5.3:27937722-27937741 | MS.gene91893:intron | 30.0% |
!! | ACAAAGATGCTAATGGATTT+AGG | + | chr5.3:27940553-27940572 | MS.gene91893:CDS | 30.0% |
!! | TTTATTACTTTGGAGGTGTT+TGG | + | chr5.3:27938183-27938202 | MS.gene91893:intron | 30.0% |
!!! | CAGACTTAAAAGCTACTTTT+GGG | + | chr5.3:27941643-27941662 | MS.gene91893:CDS | 30.0% |
!!! | CTGGAAGAAGGATTTTTTTT+AGG | + | chr5.3:27938241-27938260 | MS.gene91893:intron | 30.0% |
!!! | GGAAGAAGGATTTTTTTTAG+GGG | + | chr5.3:27938243-27938262 | MS.gene91893:intron | 30.0% |
!!! | GTTGTCATTGGATTTTTTTC+AGG | + | chr5.3:27938104-27938123 | MS.gene91893:intron | 30.0% |
!!! | TGTCATTGGATTTTTTTCAG+GGG | + | chr5.3:27938106-27938125 | MS.gene91893:intron | 30.0% |
AAAACTCCAACCAAGAAAAC+GGG | - | chr5.3:27939003-27939022 | None:intergenic | 35.0% | |
AAGCTTCAACTGAGTTCTAT+AGG | + | chr5.3:27940617-27940636 | MS.gene91893:CDS | 35.0% | |
AAGCTTCGAAAAGGTCTAAA+GGG | + | chr5.3:27941168-27941187 | MS.gene91893:CDS | 35.0% | |
AAGTGACATGATTATGAGTC+AGG | + | chr5.3:27939160-27939179 | MS.gene91893:intron | 35.0% | |
AATTCTTCCCCATAAACAGA+AGG | - | chr5.3:27940580-27940599 | None:intergenic | 35.0% | |
ACAAAGAGTGAAATGTACTC+TGG | - | chr5.3:27941141-27941160 | None:intergenic | 35.0% | |
ACGTGTAACAAAGATGCTAA+TGG | + | chr5.3:27940546-27940565 | MS.gene91893:CDS | 35.0% | |
ACTGGATACTCAACAAAAAG+TGG | + | chr5.3:27941968-27941987 | MS.gene91893:CDS | 35.0% | |
ACTTCATACGTCAAAGACTA+CGG | + | chr5.3:27940937-27940956 | MS.gene91893:CDS | 35.0% | |
ACTTGAGCACAACAATCTTA+TGG | + | chr5.3:27942052-27942071 | MS.gene91893:CDS | 35.0% | |
AGCTTCAACTGAGTTCTATA+GGG | + | chr5.3:27940618-27940637 | MS.gene91893:CDS | 35.0% | |
ATAACTGTTGTGACACTGTT+TGG | + | chr5.3:27937932-27937951 | MS.gene91893:intron | 35.0% | |
ATAGAACCATAACCTTGTCA+AGG | - | chr5.3:27941221-27941240 | None:intergenic | 35.0% | |
ATCCAACGGATGTAAAGAAA+CGG | + | chr5.3:27942114-27942133 | MS.gene91893:CDS | 35.0% | |
ATGAGGAATTCAGATCTTTC+AGG | - | chr5.3:27941086-27941105 | None:intergenic | 35.0% | |
ATTGACGTGGCAAACTAATA+TGG | + | chr5.3:27941614-27941633 | MS.gene91893:CDS | 35.0% | |
ATTGATACGTGCACATCAAA+TGG | + | chr5.3:27940078-27940097 | MS.gene91893:intron | 35.0% | |
ATTTGCTTATGTTATGGCGT+AGG | + | chr5.3:27938214-27938233 | MS.gene91893:intron | 35.0% | |
CATGAGTACACACATTTGAT+AGG | - | chr5.3:27941700-27941719 | None:intergenic | 35.0% | |
CCAATTTACCGCAAAATTAG+AGG | + | chr5.3:27941377-27941396 | MS.gene91893:CDS | 35.0% | |
CTTAGGGTTTATTACTTTGG+AGG | + | chr5.3:27938176-27938195 | MS.gene91893:intron | 35.0% | |
GAGAGGACAATAATGAAAGT+AGG | - | chr5.3:27939981-27940000 | None:intergenic | 35.0% | |
GATTTAGGTCCTTCTGTTTA+TGG | + | chr5.3:27940568-27940587 | MS.gene91893:CDS | 35.0% | |
TAAGCTTCGAAAAGGTCTAA+AGG | + | chr5.3:27941167-27941186 | MS.gene91893:CDS | 35.0% | |
TAATCTTCGTTTCAGTTCCA+GGG | - | chr5.3:27940747-27940766 | None:intergenic | 35.0% | |
TAGAACCATAACCTTGTCAA+GGG | - | chr5.3:27941220-27941239 | None:intergenic | 35.0% | |
TAGAGACATTCTGATGTACA+TGG | + | chr5.3:27940351-27940370 | MS.gene91893:CDS | 35.0% | |
TAGTGAGGATTATGAAATCC+AGG | + | chr5.3:27942024-27942043 | MS.gene91893:CDS | 35.0% | |
TATATAGGGTCTGATTGGAT+TGG | + | chr5.3:27937886-27937905 | MS.gene91893:intron | 35.0% | |
TGAAACGAAGATTACTACTC+TGG | + | chr5.3:27940753-27940772 | MS.gene91893:CDS | 35.0% | |
TGTTGTTGCACAAAAGGAAT+CGG | + | chr5.3:27941935-27941954 | MS.gene91893:CDS | 35.0% | |
TTAAGGGAAGAAATGTCCTT+AGG | + | chr5.3:27941820-27941839 | MS.gene91893:CDS | 35.0% | |
TTAGGAATGTTGTGTGAATG+AGG | - | chr5.3:27939280-27939299 | None:intergenic | 35.0% | |
TTCTTTACATCCGTTGGATT+TGG | - | chr5.3:27942113-27942132 | None:intergenic | 35.0% | |
TTGACGTGGCAAACTAATAT+GGG | + | chr5.3:27941615-27941634 | MS.gene91893:CDS | 35.0% | |
TTTAGGTCCTTCTGTTTATG+GGG | + | chr5.3:27940570-27940589 | MS.gene91893:CDS | 35.0% | |
TTTGATGTGCACGTATCAAT+AGG | - | chr5.3:27940078-27940097 | None:intergenic | 35.0% | |
! | AAACATGCCCTCTAATTTTG+CGG | - | chr5.3:27941388-27941407 | None:intergenic | 35.0% |
! | ATGTTATTGATAACACCGGT+AGG | + | chr5.3:27939812-27939831 | MS.gene91893:intron | 35.0% |
! | CAGATATTTATTGAGTGCTG+TGG | + | chr5.3:27940649-27940668 | MS.gene91893:CDS | 35.0% |
! | CCTCTAATTTTGCGGTAAAT+TGG | - | chr5.3:27941380-27941399 | None:intergenic | 35.0% |
! | CTGCATGTTATTGATAACAC+CGG | + | chr5.3:27939808-27939827 | MS.gene91893:intron | 35.0% |
! | TAATGATCAAATTGGTGCCT+AGG | + | chr5.3:27938135-27938154 | MS.gene91893:intron | 35.0% |
! | TCGACTGTTGAATATGCTTT+TGG | + | chr5.3:27940471-27940490 | MS.gene91893:CDS | 35.0% |
! | TGTTATTGATAACACCGGTA+GGG | + | chr5.3:27939813-27939832 | MS.gene91893:intron | 35.0% |
! | TTTTCATTATTAGGCCCTAC+CGG | - | chr5.3:27939830-27939849 | None:intergenic | 35.0% |
!! | CAAGTTTTATCACCATACCT+CGG | - | chr5.3:27937405-27937424 | None:intergenic | 35.0% |
!! | CAATCATTGGCTTTGGTTAA+GGG | + | chr5.3:27941804-27941823 | MS.gene91893:CDS | 35.0% |
!! | CAGCACTTTTTAACAACACT+GGG | - | chr5.3:27939652-27939671 | None:intergenic | 35.0% |
!! | GAAGGCTGTTGATTTCAAAA+AGG | + | chr5.3:27939050-27939069 | MS.gene91893:intron | 35.0% |
!! | GCAGACTTAAAAGCTACTTT+TGG | + | chr5.3:27941642-27941661 | MS.gene91893:CDS | 35.0% |
!! | GTGAAATGTACTCTGGAATA+CGG | - | chr5.3:27941134-27941153 | None:intergenic | 35.0% |
!! | TCAGCACTTTTTAACAACAC+TGG | - | chr5.3:27939653-27939672 | None:intergenic | 35.0% |
!! | TGAAATGTACTCTGGAATAC+GGG | - | chr5.3:27941133-27941152 | None:intergenic | 35.0% |
!! | TTAGCTTTGAAGAGCTTTAC+AGG | + | chr5.3:27937478-27937497 | MS.gene91893:CDS | 35.0% |
!!! | TTAAAAGCTACTTTTGGGAG+TGG | + | chr5.3:27941648-27941667 | MS.gene91893:CDS | 35.0% |
AAAACTCGGTATCAAACCCA+AGG | - | chr5.3:27937697-27937716 | None:intergenic | 40.0% | |
AAACTCCAACCAAGAAAACG+GGG | - | chr5.3:27939002-27939021 | None:intergenic | 40.0% | |
AAAGTGGGATGACCACAATA+AGG | + | chr5.3:27940315-27940334 | MS.gene91893:CDS | 40.0% | |
AACAAAAAGTGGAGGAGGAT+CGG | + | chr5.3:27941979-27941998 | MS.gene91893:CDS | 40.0% | |
AACGAAGATTACTACTCTGG+TGG | + | chr5.3:27940756-27940775 | MS.gene91893:CDS | 40.0% | |
ACATTCTGATGTACATGGAC+AGG | + | chr5.3:27940356-27940375 | MS.gene91893:CDS | 40.0% | |
ACGTCAATTTCCTGCCATTA+TGG | - | chr5.3:27941602-27941621 | None:intergenic | 40.0% | |
ACTACAACTATGGCGATGTT+TGG | - | chr5.3:27938082-27938101 | None:intergenic | 40.0% | |
ACTTCCTACCTTAAGCAACT+GGG | + | chr5.3:27939311-27939330 | MS.gene91893:intron | 40.0% | |
AGATTGAAGCAGCAATAGTG+AGG | + | chr5.3:27942009-27942028 | MS.gene91893:CDS | 40.0% | |
AGGAACTGTTGTTGCACAAA+AGG | + | chr5.3:27941929-27941948 | MS.gene91893:CDS | 40.0% | |
ATAACTCTCCCAGTTGCTTA+AGG | - | chr5.3:27939322-27939341 | None:intergenic | 40.0% | |
ATAATGGCAGGAAATTGACG+TGG | + | chr5.3:27941601-27941620 | MS.gene91893:CDS | 40.0% | |
ATCCGTTTCTTTACATCCGT+TGG | - | chr5.3:27942119-27942138 | None:intergenic | 40.0% | |
ATCCTGTTGAATTTGTGCAG+AGG | + | chr5.3:27940995-27941014 | MS.gene91893:CDS | 40.0% | |
ATGTTATGGCGTAAGCTATC+TGG | + | chr5.3:27938359-27938378 | MS.gene91893:intron | 40.0% | |
CAGCACTTTGCGAGAAATTT+CGG | + | chr5.3:27941559-27941578 | MS.gene91893:CDS | 40.0% | |
CGAGGTATGGTGATAAAACT+TGG | + | chr5.3:27937403-27937422 | MS.gene91893:CDS | 40.0% | |
CGTATATTTGATTGCCAAGC+TGG | + | chr5.3:27939223-27939242 | MS.gene91893:intron | 40.0% | |
CGTCAATTTCCTGCCATTAT+GGG | - | chr5.3:27941601-27941620 | None:intergenic | 40.0% | |
CTTAACTATGAGACTCCTCT+AGG | - | chr5.3:27941337-27941356 | None:intergenic | 40.0% | |
GAGTACACACATTTGATAGG+TGG | - | chr5.3:27941697-27941716 | None:intergenic | 40.0% | |
GATTACCCTTGACAAGGTTA+TGG | + | chr5.3:27941212-27941231 | MS.gene91893:CDS | 40.0% | |
GCGAAACTAAGATAGCATCA+CGG | - | chr5.3:27939722-27939741 | None:intergenic | 40.0% | |
GGATACTCAACAAAAAGTGG+AGG | + | chr5.3:27941971-27941990 | MS.gene91893:CDS | 40.0% | |
GGTTCTATTTCGGTATTTGC+AGG | + | chr5.3:27941233-27941252 | MS.gene91893:CDS | 40.0% | |
GTAATCTTCGTTTCAGTTCC+AGG | - | chr5.3:27940748-27940767 | None:intergenic | 40.0% | |
GTAGACGATAAGCTTCGAAA+AGG | + | chr5.3:27941159-27941178 | MS.gene91893:CDS | 40.0% | |
GTCTATGTGCAAATAGGGTT+AGG | + | chr5.3:27939625-27939644 | MS.gene91893:intron | 40.0% | |
GTTAAGCTGAAGACAGAATG+TGG | + | chr5.3:27941351-27941370 | MS.gene91893:CDS | 40.0% | |
TAACCAAAGCCAATGATTGC+AGG | - | chr5.3:27941803-27941822 | None:intergenic | 40.0% | |
TACTCAACAAAAAGTGGAGG+AGG | + | chr5.3:27941974-27941993 | MS.gene91893:CDS | 40.0% | |
TACTGATCCTGAAAGGTTGA+AGG | + | chr5.3:27940972-27940991 | MS.gene91893:CDS | 40.0% | |
TACTTCCTACCTTAAGCAAC+TGG | + | chr5.3:27939310-27939329 | MS.gene91893:intron | 40.0% | |
TAGTTAACACAGATGGTGAC+TGG | - | chr5.3:27938945-27938964 | None:intergenic | 40.0% | |
TATTACCTCAGCACCCATAA+TGG | + | chr5.3:27941585-27941604 | MS.gene91893:CDS | 40.0% | |
TCAGTTGAAGCTTGCAGAAA+AGG | - | chr5.3:27940610-27940629 | None:intergenic | 40.0% | |
TCCTCTATTAACAACTTCGC+CGG | - | chr5.3:27940518-27940537 | None:intergenic | 40.0% | |
TGCTGATAGACTAAGCTACA+AGG | + | chr5.3:27941731-27941750 | MS.gene91893:CDS | 40.0% | |
TGGCATTGTGATACTGTTGT+CGG | + | chr5.3:27937670-27937689 | MS.gene91893:intron | 40.0% | |
TTACATCCGTTGGATTTGGA+AGG | - | chr5.3:27942109-27942128 | None:intergenic | 40.0% | |
TTCCAGCATCAGATTTGAAG+AGG | + | chr5.3:27941775-27941794 | MS.gene91893:CDS | 40.0% | |
TTCTTCACAAATTTGGCGAG+AGG | + | chr5.3:27940191-27940210 | MS.gene91893:CDS | 40.0% | |
! | AAGAGGAATTTTCGCGTTGA+GGG | + | chr5.3:27937354-27937373 | MS.gene91893:CDS | 40.0% |
! | ACTATGGTTAGCTGTGTTAG+TGG | + | chr5.3:27938873-27938892 | MS.gene91893:intron | 40.0% |
! | ACTATTGCTGCTTCAATCTG+GGG | - | chr5.3:27942008-27942027 | None:intergenic | 40.0% |
! | CACTATTGCTGCTTCAATCT+GGG | - | chr5.3:27942009-27942028 | None:intergenic | 40.0% |
! | CAGTTGTCTTCTTGATGGTT+TGG | - | chr5.3:27940390-27940409 | None:intergenic | 40.0% |
! | GAAGAACATTTTCTCTCCAC+AGG | - | chr5.3:27940432-27940451 | None:intergenic | 40.0% |
! | GTTCTTTGGGTTTACACGTA+GGG | + | chr5.3:27938775-27938794 | MS.gene91893:intron | 40.0% |
! | TCACTATTGCTGCTTCAATC+TGG | - | chr5.3:27942010-27942029 | None:intergenic | 40.0% |
! | TGTATCGATATCTTGCCTAG+AGG | + | chr5.3:27942192-27942211 | MS.gene91893:CDS | 40.0% |
! | TTATTGAGTGCTGTGGTTCT+GGG | + | chr5.3:27940656-27940675 | MS.gene91893:CDS | 40.0% |
! | TTCTGGGGATTATCTCAAGA+AGG | + | chr5.3:27940672-27940691 | MS.gene91893:CDS | 40.0% |
! | TTCTTTGGGTTTACACGTAG+GGG | + | chr5.3:27938776-27938795 | MS.gene91893:intron | 40.0% |
! | TTGTTAAGTCCCCGTTTTCT+TGG | + | chr5.3:27938990-27939009 | MS.gene91893:intron | 40.0% |
! | TTTATTGAGTGCTGTGGTTC+TGG | + | chr5.3:27940655-27940674 | MS.gene91893:CDS | 40.0% |
!! | AGCTTGTTACTGATCCTGAA+AGG | + | chr5.3:27940965-27940984 | MS.gene91893:CDS | 40.0% |
!! | CAAAGTGCTGACATTTCTGT+CGG | - | chr5.3:27941549-27941568 | None:intergenic | 40.0% |
!! | GAAATGTACTCTGGAATACG+GGG | - | chr5.3:27941132-27941151 | None:intergenic | 40.0% |
!! | GCAATCATTGGCTTTGGTTA+AGG | + | chr5.3:27941803-27941822 | MS.gene91893:CDS | 40.0% |
ACAGGATCCTTCAACCTTTC+AGG | - | chr5.3:27940982-27941001 | None:intergenic | 45.0% | |
ACCGGCGAAGTTGTTAATAG+AGG | + | chr5.3:27940514-27940533 | MS.gene91893:CDS | 45.0% | |
ACGCGAAAATTCCTCTTCCT+TGG | - | chr5.3:27937351-27937370 | None:intergenic | 45.0% | |
AGAACCTGCACAGTTAGTGT+AGG | - | chr5.3:27941480-27941499 | None:intergenic | 45.0% | |
AGATCTGTTGAAGCCACTCA+AGG | + | chr5.3:27940265-27940284 | MS.gene91893:CDS | 45.0% | |
AGCCTCTGCACAAATTCAAC+AGG | - | chr5.3:27941000-27941019 | None:intergenic | 45.0% | |
AGGTCTAAAGGGAGTTAGTG+AGG | + | chr5.3:27941179-27941198 | MS.gene91893:CDS | 45.0% | |
ATGAACTTGGTCAGAACCTG+TGG | + | chr5.3:27940413-27940432 | MS.gene91893:CDS | 45.0% | |
ATGTTATGGCGTAGGCTATC+TGG | + | chr5.3:27938222-27938241 | MS.gene91893:intron | 45.0% | |
CAACAGATCTAGCCATCTCT+TGG | - | chr5.3:27940255-27940274 | None:intergenic | 45.0% | |
CACCTCTTCAAATCTGATGC+TGG | - | chr5.3:27941780-27941799 | None:intergenic | 45.0% | |
CACTCAAGGAAGTTCCTTTC+TGG | + | chr5.3:27940279-27940298 | MS.gene91893:CDS | 45.0% | |
CAGAAAGGAACTTCCTTGAG+TGG | - | chr5.3:27940281-27940300 | None:intergenic | 45.0% | |
CATGTCACACTAGATTGAGC+TGG | - | chr5.3:27941519-27941538 | None:intergenic | 45.0% | |
CGCGAAAATTCCTCTTCCTT+GGG | - | chr5.3:27937350-27937369 | None:intergenic | 45.0% | |
CTCTTGGAGATGAGAAGTCA+TGG | - | chr5.3:27940239-27940258 | None:intergenic | 45.0% | |
GACTTCTCATCTCCAAGAGA+TGG | + | chr5.3:27940240-27940259 | MS.gene91893:CDS | 45.0% | |
GATTACTACTCTGGTGGAGA+AGG | + | chr5.3:27940762-27940781 | MS.gene91893:CDS | 45.0% | |
GCACAACAATCTTATGGCTG+AGG | + | chr5.3:27942058-27942077 | MS.gene91893:CDS | 45.0% | |
GCGATTCCTTCCAAATCCAA+CGG | + | chr5.3:27942100-27942119 | MS.gene91893:CDS | 45.0% | |
GGGAAGAAATGTCCTTAGGA+AGG | + | chr5.3:27941824-27941843 | MS.gene91893:CDS | 45.0% | |
TCAACAGTCGAGTCCTTATC+TGG | - | chr5.3:27940462-27940481 | None:intergenic | 45.0% | |
TCGCAAACATCTTTACCCAC+AGG | - | chr5.3:27941852-27941871 | None:intergenic | 45.0% | |
TGATACTGTTGTCGGTCCTT+GGG | + | chr5.3:27937678-27937697 | MS.gene91893:intron | 45.0% | |
TGATAGAGTGAGCCACTACT+TGG | + | chr5.3:27940720-27940739 | MS.gene91893:CDS | 45.0% | |
TGCACAAAAGGAATCGGAAC+TGG | + | chr5.3:27941941-27941960 | MS.gene91893:CDS | 45.0% | |
TGCAGAGATTACCCTTGACA+AGG | + | chr5.3:27941206-27941225 | MS.gene91893:CDS | 45.0% | |
TGTGGGTAAAGATGTTTGCG+AGG | + | chr5.3:27941851-27941870 | MS.gene91893:CDS | 45.0% | |
TTAGTACACAGTGAGCGTAC+CGG | + | chr5.3:27940496-27940515 | MS.gene91893:CDS | 45.0% | |
TTGGAGATGAGAAGTCATGG+TGG | - | chr5.3:27940236-27940255 | None:intergenic | 45.0% | |
TTTCCAAGAATTCCCGCTCA+AGG | - | chr5.3:27942151-27942170 | None:intergenic | 45.0% | |
! | AACTTGTTCAGTCGTGTCAC+CGG | + | chr5.3:27940886-27940905 | MS.gene91893:CDS | 45.0% |
! | CGTTCTTTGGGTTTACACGT+AGG | + | chr5.3:27938774-27938793 | MS.gene91893:intron | 45.0% |
! | GAAGAGGAATTTTCGCGTTG+AGG | + | chr5.3:27937353-27937372 | MS.gene91893:CDS | 45.0% |
! | TAAGTCCCCGTTTTCTTGGT+TGG | + | chr5.3:27938994-27939013 | MS.gene91893:intron | 45.0% |
! | TATTGAGTGCTGTGGTTCTG+GGG | + | chr5.3:27940657-27940676 | MS.gene91893:CDS | 45.0% |
!! | ACGTATTTTCGAGAGACCAC+CGG | - | chr5.3:27940908-27940927 | None:intergenic | 45.0% |
!! | ATGTGGTTGTAATGGATCCG+AGG | + | chr5.3:27937385-27937404 | MS.gene91893:CDS | 45.0% |
!! | CAATGATGGCTTGCTACTGA+AGG | - | chr5.3:27939027-27939046 | None:intergenic | 45.0% |
!! | GTTGTAATGGATCCGAGGTA+TGG | + | chr5.3:27937390-27937409 | MS.gene91893:CDS | 45.0% |
!!! | CGTTGAGGGTTTTAAGCATG+TGG | + | chr5.3:27937368-27937387 | MS.gene91893:CDS | 45.0% |
AATGCCAACCACCCTGAGTT+AGG | + | chr5.3:27941447-27941466 | MS.gene91893:CDS | 50.0% | |
ACAAGCAGCACCTTGCAAAG+CGG | + | chr5.3:27941280-27941299 | MS.gene91893:CDS | 50.0% | |
CACAGTAGCTGATCCCGTTT+GGG | - | chr5.3:27938589-27938608 | None:intergenic | 50.0% | |
CTCTCCCAGTTGCTTAAGGT+AGG | - | chr5.3:27939318-27939337 | None:intergenic | 50.0% | |
GATGGTAGATGCACAAGCTG+TGG | + | chr5.3:27939931-27939950 | MS.gene91893:intron | 50.0% | |
GATTGAGTCTCTCCTTGAGC+GGG | + | chr5.3:27942136-27942155 | MS.gene91893:CDS | 50.0% | |
GGAATCGGAACTGGAGAAAC+TGG | + | chr5.3:27941950-27941969 | MS.gene91893:CDS | 50.0% | |
GGATTGAGTCTCTCCTTGAG+CGG | + | chr5.3:27942135-27942154 | MS.gene91893:CDS | 50.0% | |
GTAGATGCACAAGCTGTGGT+TGG | + | chr5.3:27939935-27939954 | MS.gene91893:intron | 50.0% | |
GTGATACTGTTGTCGGTCCT+TGG | + | chr5.3:27937677-27937696 | MS.gene91893:intron | 50.0% | |
TACTCTGGTGGAGAAGGAGA+TGG | + | chr5.3:27940768-27940787 | MS.gene91893:CDS | 50.0% | |
TAGGACCATCGCCTAACTCA+GGG | - | chr5.3:27941461-27941480 | None:intergenic | 50.0% | |
TCACAGTAGCTGATCCCGTT+TGG | - | chr5.3:27938590-27938609 | None:intergenic | 50.0% | |
TCTCCTTGAGCGGGAATTCT+TGG | + | chr5.3:27942145-27942164 | MS.gene91893:CDS | 50.0% | |
TGGTCCTACACTAACTGTGC+AGG | + | chr5.3:27941473-27941492 | MS.gene91893:CDS | 50.0% | |
TTGGCGAGAGGCTATACTCT+GGG | + | chr5.3:27940203-27940222 | MS.gene91893:CDS | 50.0% | |
TTTGGCGAGAGGCTATACTC+TGG | + | chr5.3:27940202-27940221 | MS.gene91893:CDS | 50.0% | |
! | ACTGTGCAGGTTCTGACAAC+AGG | + | chr5.3:27941486-27941505 | MS.gene91893:CDS | 50.0% |
! | AGGTTCTGACAACAGGGTCT+TGG | + | chr5.3:27941493-27941512 | MS.gene91893:CDS | 50.0% |
! | CAGACAAAAGCCGCTTTGCA+AGG | - | chr5.3:27941293-27941312 | None:intergenic | 50.0% |
! | CTGTGCAGGTTCTGACAACA+GGG | + | chr5.3:27941487-27941506 | MS.gene91893:CDS | 50.0% |
! | CTTGCAAAGCGGCTTTTGTC+TGG | + | chr5.3:27941291-27941310 | MS.gene91893:CDS | 50.0% |
! | GTGCTGACATTTCTGTCGGA+AGG | - | chr5.3:27941545-27941564 | None:intergenic | 50.0% |
! | GTTGTGCTCAAGTTGCTTCC+TGG | - | chr5.3:27942045-27942064 | None:intergenic | 50.0% |
!! | AAGTGCTGATAGCAGCGCTA+TGG | + | chr5.3:27939664-27939683 | MS.gene91893:intron | 50.0% |
!! | GAAGAGGTGCCTGCAATCAT+TGG | + | chr5.3:27941791-27941810 | MS.gene91893:CDS | 50.0% |
!! | GTGCCTGCAATCATTGGCTT+TGG | + | chr5.3:27941797-27941816 | MS.gene91893:CDS | 50.0% |
AACCACCCTGAGTTAGGCGA+TGG | + | chr5.3:27941453-27941472 | MS.gene91893:CDS | 55.0% | |
ACCTCAGCACCCATAATGGC+AGG | + | chr5.3:27941589-27941608 | MS.gene91893:CDS | 55.0% | |
AGCAAGCCATCATTGCGCGA+AGG | + | chr5.3:27939032-27939051 | MS.gene91893:intron | 55.0% | |
ATCGCCTAACTCAGGGTGGT+TGG | - | chr5.3:27941454-27941473 | None:intergenic | 55.0% | |
CAACAGCCTTCGCGCAATGA+TGG | - | chr5.3:27939041-27939060 | None:intergenic | 55.0% | |
CAGTTCCAGGGTCCAAGTAG+TGG | - | chr5.3:27940735-27940754 | None:intergenic | 55.0% | |
GGCGTAGGCTATCTGGAAGA+AGG | + | chr5.3:27938229-27938248 | MS.gene91893:intron | 55.0% | |
GGCTGAGATGCGTCTGAATG+AGG | + | chr5.3:27940693-27940712 | MS.gene91893:CDS | 55.0% | |
GTAGGACCATCGCCTAACTC+AGG | - | chr5.3:27941462-27941481 | None:intergenic | 55.0% | |
GTCCTTAGGAAGGAGCCTGT+GGG | + | chr5.3:27941834-27941853 | MS.gene91893:CDS | 55.0% | |
TACCCACAGGCTCCTTCCTA+AGG | - | chr5.3:27941839-27941858 | None:intergenic | 55.0% | |
TGTCCTTAGGAAGGAGCCTG+TGG | + | chr5.3:27941833-27941852 | MS.gene91893:CDS | 55.0% | |
TTGTTCAGTCGTGTCACCGG+TGG | + | chr5.3:27940889-27940908 | MS.gene91893:CDS | 55.0% | |
! | TCCTGCCATTATGGGTGCTG+AGG | - | chr5.3:27941593-27941612 | None:intergenic | 55.0% |
CGAGAGGCTATACTCTGGGC+TGG | + | chr5.3:27940207-27940226 | MS.gene91893:CDS | 60.0% | |
GACCATCGCCTAACTCAGGG+TGG | - | chr5.3:27941458-27941477 | None:intergenic | 60.0% | |
GTGAGCCACTACTTGGACCC+TGG | + | chr5.3:27940727-27940746 | MS.gene91893:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 27937339 | 27942211 | 27937339 | ID=MS.gene91893 |
chr5.3 | mRNA | 27937339 | 27942211 | 27937339 | ID=MS.gene91893.t1;Parent=MS.gene91893 |
chr5.3 | exon | 27937339 | 27937499 | 27937339 | ID=MS.gene91893.t1.exon1;Parent=MS.gene91893.t1 |
chr5.3 | CDS | 27937339 | 27937499 | 27937339 | ID=cds.MS.gene91893.t1;Parent=MS.gene91893.t1 |
chr5.3 | exon | 27940174 | 27942211 | 27940174 | ID=MS.gene91893.t1.exon2;Parent=MS.gene91893.t1 |
chr5.3 | CDS | 27940174 | 27942211 | 27940174 | ID=cds.MS.gene91893.t1;Parent=MS.gene91893.t1 |
Gene Sequence |
Protein sequence |