AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene92023

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92023.t1 MTR_7g018380 99.161 715 6 0 1 715 1 715 0.0 1443
MS.gene92023.t1 MTR_8g075040 98.601 715 8 1 1 715 54 766 0.0 1434
MS.gene92023.t1 MTR_1g066620 91.622 561 45 2 156 715 2 561 0.0 1059
MS.gene92023.t1 MTR_3g080970 39.970 673 354 14 41 702 74 707 1.22e-155 468
MS.gene92023.t1 MTR_2g095440 41.561 551 289 7 152 702 62 579 2.10e-150 450
MS.gene92023.t1 MTR_2g095440 41.499 547 287 7 156 702 12 525 2.64e-149 445
MS.gene92023.t1 MTR_2g095440 41.348 549 289 7 154 702 4 519 3.10e-149 445
MS.gene92023.t1 MTR_4g057795 41.155 554 293 6 152 705 62 582 1.43e-146 440
MS.gene92023.t1 MTR_4g057795 41.270 504 263 7 202 705 2 472 1.27e-129 393
MS.gene92023.t1 MTR_3g095010 29.392 592 367 14 144 715 96 656 2.57e-62 221
MS.gene92023.t1 MTR_7g102070 28.814 236 127 8 482 691 420 640 1.46e-13 75.1
MS.gene92023.t1 MTR_1g063170 30.332 211 112 7 482 666 393 594 1.46e-13 75.1
MS.gene92023.t1 MTR_4g124050 29.237 236 105 9 493 691 1055 1265 2.00e-13 74.7
MS.gene92023.t1 MTR_3g107800 29.046 241 109 9 488 691 1026 1241 6.93e-13 72.8
MS.gene92023.t1 MTR_8g022270 27.232 224 134 7 488 691 598 812 1.54e-12 72.0
MS.gene92023.t1 MTR_5g029750 27.632 228 128 9 488 691 989 1203 1.58e-12 71.6
MS.gene92023.t1 MTR_6g011680 31.441 229 118 10 488 691 1008 1222 2.26e-12 71.2
MS.gene92023.t1 MTR_3g093430 30.213 235 113 9 488 691 364 578 2.34e-11 67.8
MS.gene92023.t1 MTR_7g079540 36.646 161 78 6 505 643 101 259 2.68e-11 65.9
MS.gene92023.t1 MTR_7g079540 36.646 161 78 6 505 643 101 259 4.54e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92023.t1 AT3G54540 78.542 727 140 6 1 715 1 723 0.0 1140
MS.gene92023.t1 AT3G54540 78.542 727 140 6 1 715 1 723 0.0 1140
MS.gene92023.t1 AT1G64550 39.462 669 344 14 52 702 83 708 9.20e-155 466
MS.gene92023.t1 AT5G60790 41.622 555 289 7 152 705 67 587 1.38e-147 443
MS.gene92023.t1 AT5G64840 29.474 570 359 11 145 701 89 628 1.47e-65 230
MS.gene92023.t1 AT5G09930 30.473 571 354 14 144 701 74 614 1.19e-62 222
MS.gene92023.t1 AT3G28390 31.718 227 112 10 493 691 985 1196 1.13e-13 75.5
MS.gene92023.t1 AT3G28345 30.734 218 125 8 481 676 988 1201 3.42e-13 73.9
MS.gene92023.t1 AT2G36910 30.097 206 109 7 487 666 367 563 4.28e-13 73.6
MS.gene92023.t1 AT2G47000 29.344 259 117 10 488 710 1042 1270 5.60e-12 70.1
MS.gene92023.t1 AT2G47000 29.344 259 117 10 488 710 1042 1270 5.60e-12 70.1
MS.gene92023.t1 AT2G47000 29.344 259 117 10 488 710 1042 1270 5.60e-12 70.1
MS.gene92023.t1 AT1G67940 32.093 215 104 9 161 366 37 218 5.82e-12 67.0
MS.gene92023.t1 AT3G62150 27.917 240 113 9 488 691 1052 1267 2.11e-11 68.2
MS.gene92023.t1 AT3G62150 27.917 240 113 9 488 691 1052 1267 2.11e-11 68.2
MS.gene92023.t1 AT3G62150 27.917 240 113 9 488 691 1052 1267 2.11e-11 68.2
MS.gene92023.t1 AT1G70610 31.792 173 104 4 488 646 455 627 2.15e-11 67.8
MS.gene92023.t1 AT1G70610 30.337 178 100 5 488 646 274 446 2.33e-11 67.4
MS.gene92023.t1 AT3G28860 31.222 221 121 9 492 691 1014 1224 2.58e-11 67.8
MS.gene92023.t1 AT3G28860 28.390 236 108 9 492 691 369 579 4.31e-11 67.0
MS.gene92023.t1 AT4G01830 28.444 225 132 8 488 691 751 967 2.73e-11 67.8
MS.gene92023.t1 AT1G10680 26.754 228 130 9 488 691 982 1196 2.90e-11 67.8
MS.gene92023.t1 AT4G25960 28.431 204 113 8 488 666 1030 1225 3.78e-11 67.4
MS.gene92023.t1 AT1G65410 27.723 202 104 5 166 354 97 269 4.24e-11 65.5
MS.gene92023.t1 AT4G01830 28.444 225 132 8 488 691 985 1201 4.37e-11 67.0
MS.gene92023.t1 AT3G28380 28.571 217 117 8 488 676 995 1201 4.49e-11 67.0
MS.gene92023.t1 AT4G18050 28.070 228 118 8 493 691 998 1208 6.31e-11 66.6
MS.gene92023.t1 AT4G18050 28.070 228 118 8 493 691 1008 1218 7.25e-11 66.2

Find 167 sgRNAs with CRISPR-Local

Find 193 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTGCAAAACTTGGTAAATA+TGG 0.195660 7.3:+79984326 MS.gene92023:CDS
CAGTGTATGCAGAAGCTTTC+GGG 0.222983 7.3:-79982723 None:intergenic
AGGCAAAGAAAGAAGCTCTT+AGG 0.283965 7.3:+79982902 MS.gene92023:CDS
ATGAAGAACGGAGTCAAATA+TGG 0.285206 7.3:+79984582 MS.gene92023:CDS
TGTTGATGTTGGCATTGATA+TGG 0.307008 7.3:+79984073 MS.gene92023:CDS
CTCTGCCATGTTGGCAGGTA+TGG 0.307869 7.3:+79982642 MS.gene92023:CDS
AAAAGCTGATAAGCCTAAAA+AGG 0.327285 7.3:+79982669 MS.gene92023:CDS
ACTTGTGTGGTACCTCTACT+TGG 0.330518 7.3:-79983932 None:intergenic
AGCTGCCCATGTGGCTGAAC+AGG 0.335346 7.3:+79982882 MS.gene92023:CDS
GGAAAACGATATGGTTTGAT+TGG 0.336999 7.3:+79983087 MS.gene92023:CDS
TAAGAATATTGATGTCCTTC+TGG 0.338734 7.3:+79983173 MS.gene92023:CDS
ACCTCAAGTGGCTTCAAATC+TGG 0.342071 7.3:-79982811 None:intergenic
CACTGTTGTCATTGGAAGTC+GGG 0.343332 7.3:+79982942 MS.gene92023:CDS
GTCTAAAATCCTCTCGGTTT+GGG 0.344431 7.3:-79984043 None:intergenic
GAGGGCTGTTCTGTGGTTAG+AGG 0.348635 7.3:+79983584 MS.gene92023:CDS
CCTGGTTTAGCCTTTGTAGA+TGG 0.353411 7.3:-79982583 None:intergenic
ATCTTGTTGAGCCTTGTTCC+CGG 0.359673 7.3:-79983823 None:intergenic
GTTGCCATTGTTGGGCCTAA+TGG 0.366354 7.3:+79984104 MS.gene92023:CDS
ATATCTCATGGAAAACGATA+TGG 0.378283 7.3:+79983078 MS.gene92023:CDS
GAATCTTCTAGCTGGTGATT+TGG 0.379502 7.3:+79984148 MS.gene92023:CDS
TTGTAATCCTCAAATGTTCC+AGG 0.380069 7.3:-79984635 None:intergenic
TTGAAAGCAGCTAGAAGAAC+CGG 0.393435 7.3:+79983804 MS.gene92023:CDS
GGGACTCGTGTTGCCATTGT+TGG 0.395294 7.3:+79984095 MS.gene92023:CDS
TCAGTGTATGCAGAAGCTTT+CGG 0.398636 7.3:-79982724 None:intergenic
CACTATTGAAGCTTCTTGCT+TGG 0.403215 7.3:+79983133 MS.gene92023:CDS
TCTGTCTCTGCCATGTTGGC+AGG 0.407416 7.3:+79982637 MS.gene92023:CDS
TGCATATCCAGATGATTTGT+GGG 0.411181 7.3:-79984464 None:intergenic
GATCTACAAAATGCAGCTTC+TGG 0.417738 7.3:+79983288 MS.gene92023:CDS
CTTCGAACTTCACCTTCACT+TGG 0.420634 7.3:-79984173 None:intergenic
TTACTAAGCCCCTCCTGGTC+TGG 0.421538 7.3:-79984290 None:intergenic
TCTTTGCCTGTTCAGCCACA+TGG 0.423166 7.3:-79982888 None:intergenic
AGTCTAAAATCCTCTCGGTT+TGG 0.427353 7.3:-79984044 None:intergenic
GTTGATGTTGGCATTGATAT+GGG 0.429990 7.3:+79984074 MS.gene92023:CDS
GAGATATTCCCAACACTTTG+TGG 0.436079 7.3:+79984217 MS.gene92023:CDS
GAAGTCAGAAGTTGAGGATA+GGG 0.442070 7.3:+79984195 MS.gene92023:CDS
AGCTAAGTTTGCAGCAGCTA+AGG 0.445509 7.3:+79983860 MS.gene92023:CDS
CCTCCTGATAGTTTGACAAT+GGG 0.445696 7.3:-79984374 None:intergenic
CACTAATCATCTTGACTTGA+GGG 0.447004 7.3:+79983566 MS.gene92023:CDS
TTGCATATCCAGATGATTTG+TGG 0.447875 7.3:-79984465 None:intergenic
TCACTGTTGTCATTGGAAGT+CGG 0.452022 7.3:+79982941 MS.gene92023:CDS
GTGTTTCATCCATTGTTAGT+AGG 0.453766 7.3:-79984241 None:intergenic
GAAAACGATATGGTTTGATT+GGG 0.457686 7.3:+79983088 MS.gene92023:CDS
AGAAGGACATCAATATTCTT+AGG 0.458676 7.3:-79983171 None:intergenic
CTTGCTTACTAAGCCCCTCC+TGG 0.460120 7.3:-79984295 None:intergenic
AGATGAACCCACAAATCATC+TGG 0.463680 7.3:+79984457 MS.gene92023:CDS
TGATGTCCTTCTGGTTGAGC+AGG 0.464580 7.3:+79983182 MS.gene92023:CDS
TGATGCACTGGCTGATGCGC+TGG 0.465610 7.3:+79984493 MS.gene92023:CDS
AAATTTCCCTGGAACATTTG+AGG 0.467370 7.3:+79984628 MS.gene92023:CDS
TTGATTGGGCCGAATGGAAT+GGG 0.471197 7.3:+79983102 MS.gene92023:CDS
GTGCAAAACTTGGTAAATAT+GGG 0.472556 7.3:+79984327 MS.gene92023:CDS
CAAAATCCTTTAGTGGCGGC+TGG 0.473137 7.3:+79983478 MS.gene92023:CDS
GTTGACTTGCCCATTCCATT+CGG 0.473986 7.3:-79983111 None:intergenic
GATGCTTTCACTGTTGTCAT+TGG 0.476220 7.3:+79982934 MS.gene92023:CDS
CATCCTCCAGCCGCCACTAA+AGG 0.476753 7.3:-79983484 None:intergenic
TAGTAGGTCCACAAAGTGTT+GGG 0.476791 7.3:-79984225 None:intergenic
TATCAGGAGGGCAGAAAGCT+CGG 0.480167 7.3:+79984387 MS.gene92023:CDS
GGTGTGAGTTCAGTAGGTTC+AGG 0.480238 7.3:-79983984 None:intergenic
CAAATATGGGTTGTTGAAGA+TGG 0.482826 7.3:+79984596 MS.gene92023:CDS
AGACTCTCGGATGTTGATGT+TGG 0.487929 7.3:+79984062 MS.gene92023:CDS
CCCTCCTGATAGTTTGACAA+TGG 0.490991 7.3:-79984375 None:intergenic
ATCAGGAGGGCAGAAAGCTC+GGG 0.492201 7.3:+79984388 MS.gene92023:CDS
AGTCGGGCTTCAGTGCTTGA+TGG 0.496702 7.3:+79982958 MS.gene92023:CDS
CCTCAAGTCAAGATGATTAG+TGG 0.497140 7.3:-79983565 None:intergenic
AAAAGCAAAAGCAAGGGAAA+GGG 0.497237 7.3:+79983888 MS.gene92023:CDS
GGCAAAGAAAGAAGCTCTTA+GGG 0.499292 7.3:+79982903 MS.gene92023:CDS
GGACTCGTGTTGCCATTGTT+GGG 0.501610 7.3:+79984096 MS.gene92023:CDS
CTGGTTGAGCAGGAGGTAGT+TGG 0.501745 7.3:+79983192 MS.gene92023:CDS
CGTCCTACAAAATCCTTTAG+TGG 0.502520 7.3:+79983471 MS.gene92023:CDS
TTGAAACTTCATTTCTATCG+TGG 0.502609 7.3:+79983702 MS.gene92023:CDS
TATTGAAGCTTCTTGCTTGG+AGG 0.502846 7.3:+79983136 MS.gene92023:CDS
TTCGAAGAAGTCAGAAGTTG+AGG 0.502896 7.3:+79984189 MS.gene92023:CDS
TAGCAAAGATGTTTCTAAGA+AGG 0.504069 7.3:+79982606 MS.gene92023:CDS
AATGCAGCTTCTGGTGAAGA+AGG 0.504187 7.3:+79983297 MS.gene92023:CDS
GAGGCTGTTCGTGCAAAACT+TGG 0.509140 7.3:+79984317 MS.gene92023:CDS
AGAAGTCAGAAGTTGAGGAT+AGG 0.509662 7.3:+79984194 MS.gene92023:CDS
CTTTGCCTGTTCAGCCACAT+GGG 0.510208 7.3:-79982887 None:intergenic
TTAGTAGGTCCACAAAGTGT+TGG 0.510313 7.3:-79984226 None:intergenic
TCTTGCTTGGAGGAAGATAC+CGG 0.512342 7.3:+79983146 MS.gene92023:CDS
AGTGGAGGTGTGAGTTCAGT+AGG 0.513028 7.3:-79983990 None:intergenic
GTTCAGTAGGTTCAGGAAAG+TGG 0.514524 7.3:-79983977 None:intergenic
TTTGATTGGGCCGAATGGAA+TGG 0.517459 7.3:+79983101 MS.gene92023:CDS
GAAAAGCAAAAGCAAGGGAA+AGG 0.518492 7.3:+79983887 MS.gene92023:CDS
TATGAACAATTACAACTGAT+GGG 0.518809 7.3:+79983378 MS.gene92023:CDS
TACTAACGAGGAAGAGGATG+CGG 0.519319 7.3:+79983335 MS.gene92023:CDS
GTATGAACAATTACAACTGA+TGG 0.520659 7.3:+79983377 MS.gene92023:CDS
TAGAGGAGTACTTGTGTCGT+TGG 0.521460 7.3:+79983601 MS.gene92023:CDS
AAATGATACTAACGAGGAAG+AGG 0.525034 7.3:+79983329 MS.gene92023:CDS
GATGCGCTGGATGAATTCAC+TGG 0.525230 7.3:+79984506 MS.gene92023:CDS
TGTCCTTCTGGTTGAGCAGG+AGG 0.526914 7.3:+79983185 MS.gene92023:CDS
TAAGCCCCTCCTGGTCTGGA+TGG 0.527473 7.3:-79984286 None:intergenic
ATTGTTGGGCCTAATGGTGC+TGG 0.529640 7.3:+79984110 MS.gene92023:CDS
AGACGAAGAAGGTACTGAAC+AGG 0.533085 7.3:-79984263 None:intergenic
TTAGAAACATCTTTGCTACC+TGG 0.537424 7.3:-79982601 None:intergenic
TGGAACATTTGAGGATTACA+AGG 0.538781 7.3:+79984637 MS.gene92023:CDS
ACTTCAGTAAAGATATCTCA+TGG 0.548568 7.3:+79983066 MS.gene92023:CDS
GAACAAGGCTCAACAAGATA+AGG 0.549422 7.3:+79983827 MS.gene92023:CDS
AGCTAGAAGAACCGGGAACA+AGG 0.549535 7.3:+79983812 MS.gene92023:CDS
TGAAGAACGGAGTCAAATAT+GGG 0.551908 7.3:+79984583 MS.gene92023:CDS
GGCACTGTCAGAAATTTCCC+TGG 0.559821 7.3:+79984617 MS.gene92023:CDS
CGTCTCCATCCAGACCAGGA+GGG 0.561023 7.3:+79984281 MS.gene92023:CDS
TGAGTCTGAAGAGGAGCAAG+AGG 0.562122 7.3:+79982777 MS.gene92023:CDS
GTCTCCATCCAGACCAGGAG+GGG 0.564083 7.3:+79984282 MS.gene92023:CDS
TTCATCCATACCTGCCAACA+TGG 0.566109 7.3:-79982647 None:intergenic
CTTTGTGGACCTACTAACAA+TGG 0.566897 7.3:+79984232 MS.gene92023:CDS
ACTAACGAGGAAGAGGATGC+GGG 0.567038 7.3:+79983336 MS.gene92023:CDS
TTGACTTGAGGGCTGTTCTG+TGG 0.568451 7.3:+79983577 MS.gene92023:CDS
TCTTCGTCTCCATCCAGACC+AGG 0.570272 7.3:+79984277 MS.gene92023:CDS
TATGCAAAGTATTGATGCAC+TGG 0.570295 7.3:+79984481 MS.gene92023:CDS
ACTTCAATAAGCTGCAGAAG+TGG 0.570862 7.3:-79984008 None:intergenic
GGAATCGAAAAGCAAAAGCA+AGG 0.571756 7.3:+79983881 MS.gene92023:CDS
TATGGTTTGATTGGGCCGAA+TGG 0.572136 7.3:+79983096 MS.gene92023:CDS
CCACTAATCATCTTGACTTG+AGG 0.575501 7.3:+79983565 MS.gene92023:CDS
ACATCAATATTCTTAGGCAC+CGG 0.584768 7.3:-79983165 None:intergenic
TTCATCAAGCAATAATAGAG+TGG 0.585100 7.3:-79983541 None:intergenic
ACACTGCTGAATCTTCTAGC+TGG 0.589769 7.3:+79984140 MS.gene92023:CDS
TTCAGACTCATCATCATCAG+AGG 0.591473 7.3:-79982764 None:intergenic
TGATGATGATGAGTCTGAAG+AGG 0.592511 7.3:+79982768 MS.gene92023:CDS
TAGAGGTACCACACAAGTGG+AGG 0.593380 7.3:+79983937 MS.gene92023:CDS
GCCAGATTTGAAGCCACTTG+AGG 0.595553 7.3:+79982810 MS.gene92023:CDS
GAATCGAAAAGCAAAAGCAA+GGG 0.597247 7.3:+79983882 MS.gene92023:CDS
CTTGTGTGGTACCTCTACTT+GGG 0.597963 7.3:-79983931 None:intergenic
CTCAAGTCAAGATGATTAGT+GGG 0.599587 7.3:-79983564 None:intergenic
GGGAAAGGGAAAGGTTGATG+AGG 0.600456 7.3:+79983902 MS.gene92023:CDS
CCGAGAGTCTAAAATCCTCT+CGG 0.603865 7.3:-79984049 None:intergenic
TTGATGTTGGCATTGATATG+GGG 0.604870 7.3:+79984075 MS.gene92023:CDS
GTGTCGTTGGAAGAAAACTT+TGG 0.605012 7.3:+79983614 MS.gene92023:CDS
CTGTAGTCCCTCCACTTGTG+TGG 0.605482 7.3:-79983945 None:intergenic
AAGTAGAGGTACCACACAAG+TGG 0.606298 7.3:+79983934 MS.gene92023:CDS
CAAAAGCAAGGGAAAGGGAA+AGG 0.608390 7.3:+79983893 MS.gene92023:CDS
TCATCAAGCAATAATAGAGT+GGG 0.608704 7.3:-79983540 None:intergenic
TCGTTGGAAGAAAACTTTGG+TGG 0.608839 7.3:+79983617 MS.gene92023:CDS
TCAATAAGCTGCAGAAGTGG+AGG 0.610264 7.3:-79984005 None:intergenic
GGTGATTTGGTTCCAAGTGA+AGG 0.610276 7.3:+79984161 MS.gene92023:CDS
TCAGACTCATCATCATCAGA+GGG 0.613503 7.3:-79982763 None:intergenic
TGTAATCCTCAAATGTTCCA+GGG 0.613886 7.3:-79984634 None:intergenic
GGGGTGAGATGATTATGACT+AGG 0.615486 7.3:-79984353 None:intergenic
GGAGGGGCTTAGTAAGCAAG+AGG 0.616783 7.3:+79984298 MS.gene92023:CDS
CCCATTGTCAAACTATCAGG+AGG 0.619312 7.3:+79984374 MS.gene92023:CDS
TCAGCAATAGACACCTCAAG+TGG 0.621486 7.3:-79982823 None:intergenic
CTCCTGATAGTTTGACAATG+GGG 0.623124 7.3:-79984373 None:intergenic
TCATCTAACAATAAAATGTG+AGG 0.624906 7.3:-79984440 None:intergenic
CCATCTACAAAGGCTAAACC+AGG 0.627415 7.3:+79982583 MS.gene92023:CDS
CTACCTCCTGCTCAACCAGA+AGG 0.630434 7.3:-79983188 None:intergenic
AATCCTTTAGTGGCGGCTGG+AGG 0.632477 7.3:+79983481 MS.gene92023:CDS
AGTGTATGCAGAAGCTTTCG+GGG 0.635811 7.3:-79982722 None:intergenic
TGAAAGCAGCTAGAAGAACC+GGG 0.637063 7.3:+79983805 MS.gene92023:CDS
AGCACCATTAGGCCCAACAA+TGG 0.640352 7.3:-79984108 None:intergenic
TCCTGATAGTTTGACAATGG+GGG 0.642790 7.3:-79984372 None:intergenic
GGTCTGGATGGAGACGAAGA+AGG 0.643717 7.3:-79984274 None:intergenic
GGCTCAACAAGATAAGGTGA+AGG 0.644665 7.3:+79983833 MS.gene92023:CDS
TCGTCTCCATCCAGACCAGG+AGG 0.645629 7.3:+79984280 MS.gene92023:CDS
TAAAATGTGAGGTCTTGACA+TGG 0.645742 7.3:-79984429 None:intergenic
TGAGGATGAGACCCAAGTAG+AGG 0.652669 7.3:+79983920 MS.gene92023:CDS
AGAGGTACCACACAAGTGGA+GGG 0.653345 7.3:+79983938 MS.gene92023:CDS
GACTCATCATCATCAGAGGG+AGG 0.655723 7.3:-79982760 None:intergenic
AGGAGGGCAGAAAGCTCGGG+TGG 0.658600 7.3:+79984391 MS.gene92023:CDS
CCTACAAAATCCTTTAGTGG+CGG 0.660892 7.3:+79983474 MS.gene92023:CDS
ATGAACAATTACAACTGATG+GGG 0.661536 7.3:+79983379 MS.gene92023:CDS
AGCTTCTGGTGAAGAAGGTG+TGG 0.667605 7.3:+79983302 MS.gene92023:CDS
GCGCTGGATGAATTCACTGG+TGG 0.669802 7.3:+79984509 MS.gene92023:CDS
GGATGCAGGACCATCTACAA+AGG 0.679069 7.3:+79982573 MS.gene92023:CDS
CCATTGTCAAACTATCAGGA+GGG 0.684004 7.3:+79984375 MS.gene92023:CDS
CAAGTGGAGGGACTACAGCG+TGG 0.701926 7.3:+79983950 MS.gene92023:CDS
TCAGTGCTTGATGGAGACGA+TGG 0.702484 7.3:+79982967 MS.gene92023:CDS
CTTCAGTTACCCAAACCGAG+AGG 0.710739 7.3:+79984034 MS.gene92023:CDS
GTGTATGCAGAAGCTTTCGG+GGG 0.711834 7.3:-79982721 None:intergenic
GTGTCTGTGATGATGAAGAA+CGG 0.713477 7.3:+79984570 MS.gene92023:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AACAATAGAAAATTTTTCTG+TGG + chr7.3:79983014-79983033 MS.gene92023:CDS 20.0%
! TATGAACAATTACAACTGAT+GGG + chr7.3:79983378-79983397 MS.gene92023:CDS 25.0%
! TCATCTAACAATAAAATGTG+AGG - chr7.3:79984443-79984462 None:intergenic 25.0%
AAAAGCTGATAAGCCTAAAA+AGG + chr7.3:79982669-79982688 MS.gene92023:CDS 30.0%
ACTTCAGTAAAGATATCTCA+TGG + chr7.3:79983066-79983085 MS.gene92023:CDS 30.0%
AGAAGGACATCAATATTCTT+AGG - chr7.3:79983174-79983193 None:intergenic 30.0%
ATATCTCATGGAAAACGATA+TGG + chr7.3:79983078-79983097 MS.gene92023:CDS 30.0%
ATGAACAATTACAACTGATG+GGG + chr7.3:79983379-79983398 MS.gene92023:CDS 30.0%
GAAAACGATATGGTTTGATT+GGG + chr7.3:79983088-79983107 MS.gene92023:CDS 30.0%
GGATAAAAATGATACTAACG+AGG + chr7.3:79983323-79983342 MS.gene92023:CDS 30.0%
GTATGAACAATTACAACTGA+TGG + chr7.3:79983377-79983396 MS.gene92023:CDS 30.0%
GTGCAAAACTTGGTAAATAT+GGG + chr7.3:79984327-79984346 MS.gene92023:CDS 30.0%
TAAGAATATTGATGTCCTTC+TGG + chr7.3:79983173-79983192 MS.gene92023:CDS 30.0%
TCATCAAGCAATAATAGAGT+GGG - chr7.3:79983543-79983562 None:intergenic 30.0%
TTCATCAAGCAATAATAGAG+TGG - chr7.3:79983544-79983563 None:intergenic 30.0%
TTGAAACTTCATTTCTATCG+TGG + chr7.3:79983702-79983721 MS.gene92023:CDS 30.0%
! TAGCAAAGATGTTTCTAAGA+AGG + chr7.3:79982606-79982625 MS.gene92023:CDS 30.0%
! TTATTCGAAGATGCCTTTTT+AGG - chr7.3:79982685-79982704 None:intergenic 30.0%
!! AATTTTGATGCTTTTGAGAG+TGG + chr7.3:79983726-79983745 MS.gene92023:CDS 30.0%
!! ATTTTGATGCTTTTGAGAGT+GGG + chr7.3:79983727-79983746 MS.gene92023:CDS 30.0%
!! TAAAAAGGCATCTTCGAATA+AGG + chr7.3:79982684-79982703 MS.gene92023:CDS 30.0%
AAAAGCAAAAGCAAGGGAAA+GGG + chr7.3:79983888-79983907 MS.gene92023:CDS 35.0%
AAATGATACTAACGAGGAAG+AGG + chr7.3:79983329-79983348 MS.gene92023:CDS 35.0%
AAATTTCCCTGGAACATTTG+AGG + chr7.3:79984628-79984647 MS.gene92023:CDS 35.0%
ACATCAATATTCTTAGGCAC+CGG - chr7.3:79983168-79983187 None:intergenic 35.0%
ATGAAGAACGGAGTCAAATA+TGG + chr7.3:79984582-79984601 MS.gene92023:CDS 35.0%
CGTGCAAAACTTGGTAAATA+TGG + chr7.3:79984326-79984345 MS.gene92023:CDS 35.0%
CTCAAGTCAAGATGATTAGT+GGG - chr7.3:79983567-79983586 None:intergenic 35.0%
GAATCGAAAAGCAAAAGCAA+GGG + chr7.3:79983882-79983901 MS.gene92023:CDS 35.0%
GGAAAACGATATGGTTTGAT+TGG + chr7.3:79983087-79983106 MS.gene92023:CDS 35.0%
GTGTTTCATCCATTGTTAGT+AGG - chr7.3:79984244-79984263 None:intergenic 35.0%
TAAAATGTGAGGTCTTGACA+TGG - chr7.3:79984432-79984451 None:intergenic 35.0%
TGAAGAACGGAGTCAAATAT+GGG + chr7.3:79984583-79984602 MS.gene92023:CDS 35.0%
TGGAACATTTGAGGATTACA+AGG + chr7.3:79984637-79984656 MS.gene92023:CDS 35.0%
TGTAATCCTCAAATGTTCCA+GGG - chr7.3:79984637-79984656 None:intergenic 35.0%
TTAGAAACATCTTTGCTACC+TGG - chr7.3:79982604-79982623 None:intergenic 35.0%
TTGCATATCCAGATGATTTG+TGG - chr7.3:79984468-79984487 None:intergenic 35.0%
TTGTAATCCTCAAATGTTCC+AGG - chr7.3:79984638-79984657 None:intergenic 35.0%
! AAAATTTTTCTGTGGCTGCT+CGG + chr7.3:79983022-79983041 MS.gene92023:CDS 35.0%
! CAAATATGGGTTGTTGAAGA+TGG + chr7.3:79984596-79984615 MS.gene92023:CDS 35.0%
! CACTAAAGGATTTTGTAGGA+CGG - chr7.3:79983473-79983492 None:intergenic 35.0%
! CACTAATCATCTTGACTTGA+GGG + chr7.3:79983566-79983585 MS.gene92023:CDS 35.0%
! TGCATATCCAGATGATTTGT+GGG - chr7.3:79984467-79984486 None:intergenic 35.0%
!! GTTGATGTTGGCATTGATAT+GGG + chr7.3:79984074-79984093 MS.gene92023:CDS 35.0%
!! TATGCAAAGTATTGATGCAC+TGG + chr7.3:79984481-79984500 MS.gene92023:CDS 35.0%
!! TGTTGATGTTGGCATTGATA+TGG + chr7.3:79984073-79984092 MS.gene92023:CDS 35.0%
!! TTGATGTTGGCATTGATATG+GGG + chr7.3:79984075-79984094 MS.gene92023:CDS 35.0%
!!! TCAAAGATTTTAGCTGGTCT+GGG + chr7.3:79983426-79983445 MS.gene92023:CDS 35.0%
AAGAAAAAGTCAGAGGATGC+AGG + chr7.3:79982559-79982578 MS.gene92023:CDS 40.0%
ACTTCAATAAGCTGCAGAAG+TGG - chr7.3:79984011-79984030 None:intergenic 40.0%
AGAAGTCAGAAGTTGAGGAT+AGG + chr7.3:79984194-79984213 MS.gene92023:CDS 40.0%
AGATGAACCCACAAATCATC+TGG + chr7.3:79984457-79984476 MS.gene92023:CDS 40.0%
AGGAGCAAGAGGAAAAACAT+AGG + chr7.3:79982788-79982807 MS.gene92023:CDS 40.0%
AGGCAAAGAAAGAAGCTCTT+AGG + chr7.3:79982902-79982921 MS.gene92023:CDS 40.0%
CACTATTGAAGCTTCTTGCT+TGG + chr7.3:79983133-79983152 MS.gene92023:CDS 40.0%
CCATTGTCAAACTATCAGGA+GGG + chr7.3:79984375-79984394 MS.gene92023:CDS 40.0%
CCTACAAAATCCTTTAGTGG+CGG + chr7.3:79983474-79983493 MS.gene92023:CDS 40.0%
CCTCAAGTCAAGATGATTAG+TGG - chr7.3:79983568-79983587 None:intergenic 40.0%
CCTCCTGATAGTTTGACAAT+GGG - chr7.3:79984377-79984396 None:intergenic 40.0%
CGTCCTACAAAATCCTTTAG+TGG + chr7.3:79983471-79983490 MS.gene92023:CDS 40.0%
CTCCTGATAGTTTGACAATG+GGG - chr7.3:79984376-79984395 None:intergenic 40.0%
CTTTGTGGACCTACTAACAA+TGG + chr7.3:79984232-79984251 MS.gene92023:CDS 40.0%
GAAAAGCAAAAGCAAGGGAA+AGG + chr7.3:79983887-79983906 MS.gene92023:CDS 40.0%
GAACAAGGCTCAACAAGATA+AGG + chr7.3:79983827-79983846 MS.gene92023:CDS 40.0%
GAAGTCAGAAGTTGAGGATA+GGG + chr7.3:79984195-79984214 MS.gene92023:CDS 40.0%
GAGATATTCCCAACACTTTG+TGG + chr7.3:79984217-79984236 MS.gene92023:CDS 40.0%
GATCTACAAAATGCAGCTTC+TGG + chr7.3:79983288-79983307 MS.gene92023:CDS 40.0%
GATGCTTTCACTGTTGTCAT+TGG + chr7.3:79982934-79982953 MS.gene92023:CDS 40.0%
GGAATCGAAAAGCAAAAGCA+AGG + chr7.3:79983881-79983900 MS.gene92023:CDS 40.0%
GGCAAAGAAAGAAGCTCTTA+GGG + chr7.3:79982903-79982922 MS.gene92023:CDS 40.0%
TATTGAAGCTTCTTGCTTGG+AGG + chr7.3:79983136-79983155 MS.gene92023:CDS 40.0%
TCACTGTTGTCATTGGAAGT+CGG + chr7.3:79982941-79982960 MS.gene92023:CDS 40.0%
TCAGACTCATCATCATCAGA+GGG - chr7.3:79982766-79982785 None:intergenic 40.0%
TCAGTGTATGCAGAAGCTTT+CGG - chr7.3:79982727-79982746 None:intergenic 40.0%
TCCTGATAGTTTGACAATGG+GGG - chr7.3:79984375-79984394 None:intergenic 40.0%
TCGTTGGAAGAAAACTTTGG+TGG + chr7.3:79983617-79983636 MS.gene92023:CDS 40.0%
TTAGTAGGTCCACAAAGTGT+TGG - chr7.3:79984229-79984248 None:intergenic 40.0%
TTCAGACTCATCATCATCAG+AGG - chr7.3:79982767-79982786 None:intergenic 40.0%
TTCGAAGAAGTCAGAAGTTG+AGG + chr7.3:79984189-79984208 MS.gene92023:CDS 40.0%
TTGAAAGCAGCTAGAAGAAC+CGG + chr7.3:79983804-79983823 MS.gene92023:CDS 40.0%
! AAATTTTTCTGTGGCTGCTC+GGG + chr7.3:79983023-79983042 MS.gene92023:CDS 40.0%
! AGTCTAAAATCCTCTCGGTT+TGG - chr7.3:79984047-79984066 None:intergenic 40.0%
! ATTTTCTGTCTCTGCCATGT+TGG + chr7.3:79982633-79982652 MS.gene92023:CDS 40.0%
! CCACTAATCATCTTGACTTG+AGG + chr7.3:79983565-79983584 MS.gene92023:CDS 40.0%
! GAATCTTCTAGCTGGTGATT+TGG + chr7.3:79984148-79984167 MS.gene92023:CDS 40.0%
! GGTTTTACAAAGGACATGCA+GGG + chr7.3:79983447-79983466 MS.gene92023:CDS 40.0%
! GTAGATTTTCCAGCACCATT+AGG - chr7.3:79984122-79984141 None:intergenic 40.0%
! GTCTAAAATCCTCTCGGTTT+GGG - chr7.3:79984046-79984065 None:intergenic 40.0%
! GTGTCGTTGGAAGAAAACTT+TGG + chr7.3:79983614-79983633 MS.gene92023:CDS 40.0%
! GTGTCTGTGATGATGAAGAA+CGG + chr7.3:79984570-79984589 MS.gene92023:CDS 40.0%
! TAGTAGGTCCACAAAGTGTT+GGG - chr7.3:79984228-79984247 None:intergenic 40.0%
! TGATGATGATGAGTCTGAAG+AGG + chr7.3:79982768-79982787 MS.gene92023:CDS 40.0%
!! CAAGCGTCAAAGATTTTAGC+TGG + chr7.3:79983420-79983439 MS.gene92023:CDS 40.0%
!!! AGATATTTTAGCTGCCCATG+TGG + chr7.3:79982873-79982892 MS.gene92023:CDS 40.0%
!!! GTCAAAGATTTTAGCTGGTC+TGG + chr7.3:79983425-79983444 MS.gene92023:CDS 40.0%
AATGCAGCTTCTGGTGAAGA+AGG + chr7.3:79983297-79983316 MS.gene92023:CDS 45.0%
ACACTGCTGAATCTTCTAGC+TGG + chr7.3:79984140-79984159 MS.gene92023:CDS 45.0%
ACCCCCATTGTCAAACTATC+AGG + chr7.3:79984371-79984390 MS.gene92023:CDS 45.0%
ACCTCAAGTGGCTTCAAATC+TGG - chr7.3:79982814-79982833 None:intergenic 45.0%
ACTTGTGTGGTACCTCTACT+TGG - chr7.3:79983935-79983954 None:intergenic 45.0%
AGACTCTCGGATGTTGATGT+TGG + chr7.3:79984062-79984081 MS.gene92023:CDS 45.0%
AGCTAAGTTTGCAGCAGCTA+AGG + chr7.3:79983860-79983879 MS.gene92023:CDS 45.0%
AGTGTATGCAGAAGCTTTCG+GGG - chr7.3:79982725-79982744 None:intergenic 45.0%
CAAAAGCAAGGGAAAGGGAA+AGG + chr7.3:79983893-79983912 MS.gene92023:CDS 45.0%
CACTGTTGTCATTGGAAGTC+GGG + chr7.3:79982942-79982961 MS.gene92023:CDS 45.0%
CAGTGTATGCAGAAGCTTTC+GGG - chr7.3:79982726-79982745 None:intergenic 45.0%
CCATCTACAAAGGCTAAACC+AGG + chr7.3:79982583-79982602 MS.gene92023:CDS 45.0%
CCCATTGTCAAACTATCAGG+AGG + chr7.3:79984374-79984393 MS.gene92023:CDS 45.0%
CCCTCCTGATAGTTTGACAA+TGG - chr7.3:79984378-79984397 None:intergenic 45.0%
CTTCGAACTTCACCTTCACT+TGG - chr7.3:79984176-79984195 None:intergenic 45.0%
CTTGTGTGGTACCTCTACTT+GGG - chr7.3:79983934-79983953 None:intergenic 45.0%
GGCTCAACAAGATAAGGTGA+AGG + chr7.3:79983833-79983852 MS.gene92023:CDS 45.0%
GGGGTGAGATGATTATGACT+AGG - chr7.3:79984356-79984375 None:intergenic 45.0%
GTTCAGTAGGTTCAGGAAAG+TGG - chr7.3:79983980-79983999 None:intergenic 45.0%
TACTAACGAGGAAGAGGATG+CGG + chr7.3:79983335-79983354 MS.gene92023:CDS 45.0%
TATGGTTTGATTGGGCCGAA+TGG + chr7.3:79983096-79983115 MS.gene92023:CDS 45.0%
TCAATAAGCTGCAGAAGTGG+AGG - chr7.3:79984008-79984027 None:intergenic 45.0%
TCAGCAATAGACACCTCAAG+TGG - chr7.3:79982826-79982845 None:intergenic 45.0%
TCTTGCTTGGAGGAAGATAC+CGG + chr7.3:79983146-79983165 MS.gene92023:CDS 45.0%
TGAAAGCAGCTAGAAGAACC+GGG + chr7.3:79983805-79983824 MS.gene92023:CDS 45.0%
TTCATCCATACCTGCCAACA+TGG - chr7.3:79982650-79982669 None:intergenic 45.0%
TTGATTGGGCCGAATGGAAT+GGG + chr7.3:79983102-79983121 MS.gene92023:CDS 45.0%
TTTGATTGGGCCGAATGGAA+TGG + chr7.3:79983101-79983120 MS.gene92023:CDS 45.0%
! AATTTTTCTGTGGCTGCTCG+GGG + chr7.3:79983024-79983043 MS.gene92023:CDS 45.0%
! CCGAGAGGATTTTAGACTCT+CGG + chr7.3:79984049-79984068 MS.gene92023:CDS 45.0%
! CCGAGAGTCTAAAATCCTCT+CGG - chr7.3:79984052-79984071 None:intergenic 45.0%
! CCGCCACTAAAGGATTTTGT+AGG - chr7.3:79983477-79983496 None:intergenic 45.0%
! CCTGGTTTAGCCTTTGTAGA+TGG - chr7.3:79982586-79982605 None:intergenic 45.0%
! GGGTTTTACAAAGGACATGC+AGG + chr7.3:79983446-79983465 MS.gene92023:CDS 45.0%
!! AAGTAGAGGTACCACACAAG+TGG + chr7.3:79983934-79983953 MS.gene92023:CDS 45.0%
!! AGACGAAGAAGGTACTGAAC+AGG - chr7.3:79984266-79984285 None:intergenic 45.0%
!! AGCTGGTCTGGGTTTTACAA+AGG + chr7.3:79983437-79983456 MS.gene92023:CDS 45.0%
!! ATCTTGTTGAGCCTTGTTCC+CGG - chr7.3:79983826-79983845 None:intergenic 45.0%
!! GGTGATTTGGTTCCAAGTGA+AGG + chr7.3:79984161-79984180 MS.gene92023:CDS 45.0%
!! GTTGACTTGCCCATTCCATT+CGG - chr7.3:79983114-79983133 None:intergenic 45.0%
!! TAGAGGAGTACTTGTGTCGT+TGG + chr7.3:79983601-79983620 MS.gene92023:CDS 45.0%
ACTAACGAGGAAGAGGATGC+GGG + chr7.3:79983336-79983355 MS.gene92023:CDS 50.0%
AGCACCATTAGGCCCAACAA+TGG - chr7.3:79984111-79984130 None:intergenic 50.0%
AGCTAGAAGAACCGGGAACA+AGG + chr7.3:79983812-79983831 MS.gene92023:CDS 50.0%
AGCTTCTGGTGAAGAAGGTG+TGG + chr7.3:79983302-79983321 MS.gene92023:CDS 50.0%
ATTGTTGGGCCTAATGGTGC+TGG + chr7.3:79984110-79984129 MS.gene92023:CDS 50.0%
CAAAATCCTTTAGTGGCGGC+TGG + chr7.3:79983478-79983497 MS.gene92023:CDS 50.0%
CTTCAGTTACCCAAACCGAG+AGG + chr7.3:79984034-79984053 MS.gene92023:CDS 50.0%
CTTTGCCTGTTCAGCCACAT+GGG - chr7.3:79982890-79982909 None:intergenic 50.0%
GACTCATCATCATCAGAGGG+AGG - chr7.3:79982763-79982782 None:intergenic 50.0%
GAGGCTGTTCGTGCAAAACT+TGG + chr7.3:79984317-79984336 MS.gene92023:CDS 50.0%
GATGCGCTGGATGAATTCAC+TGG + chr7.3:79984506-79984525 MS.gene92023:CDS 50.0%
GGACTCGTGTTGCCATTGTT+GGG + chr7.3:79984096-79984115 MS.gene92023:CDS 50.0%
GGATGCAGGACCATCTACAA+AGG + chr7.3:79982573-79982592 MS.gene92023:CDS 50.0%
GGCACTGTCAGAAATTTCCC+TGG + chr7.3:79984617-79984636 MS.gene92023:CDS 50.0%
GGTGTGAGTTCAGTAGGTTC+AGG - chr7.3:79983987-79984006 None:intergenic 50.0%
GTGTATGCAGAAGCTTTCGG+GGG - chr7.3:79982724-79982743 None:intergenic 50.0%
GTTGCCATTGTTGGGCCTAA+TGG + chr7.3:79984104-79984123 MS.gene92023:CDS 50.0%
TATCAGGAGGGCAGAAAGCT+CGG + chr7.3:79984387-79984406 MS.gene92023:CDS 50.0%
TCAGTGCTTGATGGAGACGA+TGG + chr7.3:79982967-79982986 MS.gene92023:CDS 50.0%
TCTTTGCCTGTTCAGCCACA+TGG - chr7.3:79982891-79982910 None:intergenic 50.0%
TGAGGATGAGACCCAAGTAG+AGG + chr7.3:79983920-79983939 MS.gene92023:CDS 50.0%
TGAGTCTGAAGAGGAGCAAG+AGG + chr7.3:79982777-79982796 MS.gene92023:CDS 50.0%
! AGTGGAGGTGTGAGTTCAGT+AGG - chr7.3:79983993-79984012 None:intergenic 50.0%
! GCCAGATTTGAAGCCACTTG+AGG + chr7.3:79982810-79982829 MS.gene92023:CDS 50.0%
! TGATGTCCTTCTGGTTGAGC+AGG + chr7.3:79983182-79983201 MS.gene92023:CDS 50.0%
! TTGACTTGAGGGCTGTTCTG+TGG + chr7.3:79983577-79983596 MS.gene92023:CDS 50.0%
!! AGAGGTACCACACAAGTGGA+GGG + chr7.3:79983938-79983957 MS.gene92023:CDS 50.0%
!! GGGAAAGGGAAAGGTTGATG+AGG + chr7.3:79983902-79983921 MS.gene92023:CDS 50.0%
!! TAGAGGTACCACACAAGTGG+AGG + chr7.3:79983937-79983956 MS.gene92023:CDS 50.0%
AATCCTTTAGTGGCGGCTGG+AGG + chr7.3:79983481-79983500 MS.gene92023:CDS 55.0%
AGTCGGGCTTCAGTGCTTGA+TGG + chr7.3:79982958-79982977 MS.gene92023:CDS 55.0%
ATCAGGAGGGCAGAAAGCTC+GGG + chr7.3:79984388-79984407 MS.gene92023:CDS 55.0%
CTACCTCCTGCTCAACCAGA+AGG - chr7.3:79983191-79983210 None:intergenic 55.0%
CTCTGCCATGTTGGCAGGTA+TGG + chr7.3:79982642-79982661 MS.gene92023:CDS 55.0%
CTGGTTGAGCAGGAGGTAGT+TGG + chr7.3:79983192-79983211 MS.gene92023:CDS 55.0%
CTGTAGTCCCTCCACTTGTG+TGG - chr7.3:79983948-79983967 None:intergenic 55.0%
CTTGCTTACTAAGCCCCTCC+TGG - chr7.3:79984298-79984317 None:intergenic 55.0%
GAGGGCTGTTCTGTGGTTAG+AGG + chr7.3:79983584-79983603 MS.gene92023:CDS 55.0%
GCGCTGGATGAATTCACTGG+TGG + chr7.3:79984509-79984528 MS.gene92023:CDS 55.0%
GGAGGGGCTTAGTAAGCAAG+AGG + chr7.3:79984298-79984317 MS.gene92023:CDS 55.0%
GGGACTCGTGTTGCCATTGT+TGG + chr7.3:79984095-79984114 MS.gene92023:CDS 55.0%
GGTCTGGATGGAGACGAAGA+AGG - chr7.3:79984277-79984296 None:intergenic 55.0%
TATGCAGAAGCTTTCGGGGG+AGG - chr7.3:79982721-79982740 None:intergenic 55.0%
TCTGTCTCTGCCATGTTGGC+AGG + chr7.3:79982637-79982656 MS.gene92023:CDS 55.0%
TCTTCGTCTCCATCCAGACC+AGG + chr7.3:79984277-79984296 MS.gene92023:CDS 55.0%
TTACTAAGCCCCTCCTGGTC+TGG - chr7.3:79984293-79984312 None:intergenic 55.0%
! GAAGCTTTCGGGGGAGGTTT+TGG - chr7.3:79982715-79982734 None:intergenic 55.0%
! TGTCCTTCTGGTTGAGCAGG+AGG + chr7.3:79983185-79983204 MS.gene92023:CDS 55.0%
AGCTGCCCATGTGGCTGAAC+AGG + chr7.3:79982882-79982901 MS.gene92023:CDS 60.0%
CAAGTGGAGGGACTACAGCG+TGG + chr7.3:79983950-79983969 MS.gene92023:CDS 60.0%
CATCCTCCAGCCGCCACTAA+AGG - chr7.3:79983487-79983506 None:intergenic 60.0%
CGTCTCCATCCAGACCAGGA+GGG + chr7.3:79984281-79984300 MS.gene92023:CDS 60.0%
GTCTCCATCCAGACCAGGAG+GGG + chr7.3:79984282-79984301 MS.gene92023:CDS 60.0%
TAAGCCCCTCCTGGTCTGGA+TGG - chr7.3:79984289-79984308 None:intergenic 60.0%
TCGTCTCCATCCAGACCAGG+AGG + chr7.3:79984280-79984299 MS.gene92023:CDS 60.0%
!! TGATGCACTGGCTGATGCGC+TGG + chr7.3:79984493-79984512 MS.gene92023:CDS 60.0%
AGGAGGGCAGAAAGCTCGGG+TGG + chr7.3:79984391-79984410 MS.gene92023:CDS 65.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 79982553 79984700 79982553 ID=MS.gene92023
chr7.3 mRNA 79982553 79984700 79982553 ID=MS.gene92023.t1;Parent=MS.gene92023
chr7.3 exon 79982553 79984700 79982553 ID=MS.gene92023.t1.exon1;Parent=MS.gene92023.t1
chr7.3 CDS 79982553 79984700 79982553 ID=cds.MS.gene92023.t1;Parent=MS.gene92023.t1
Gene Sequence

>MS.gene92023

ATGGGTAAGAAAAAGTCAGAGGATGCAGGACCATCTACAAAGGCTAAACCAGGTAGCAAAGATGTTTCTAAGAAGGAAAAATTTTCTGTCTCTGCCATGTTGGCAGGTATGGATGAAAAAGCTGATAAGCCTAAAAAGGCATCTTCGAATAAGGCGAAGCCAAAACCTCCCCCGAAAGCTTCTGCATACACTGATGATATTGATCTTCCTCCCTCTGATGATGATGAGTCTGAAGAGGAGCAAGAGGAAAAACATAGGCCAGATTTGAAGCCACTTGAGGTGTCTATTGCTGAAAAAGAGTTGAAAAAGCGTGAAAAGAAAGATATTTTAGCTGCCCATGTGGCTGAACAGGCAAAGAAAGAAGCTCTTAGGGATGATCGTGATGCTTTCACTGTTGTCATTGGAAGTCGGGCTTCAGTGCTTGATGGAGACGATGGTGCTGATGCTAATGTCAAAGATATAACAATAGAAAATTTTTCTGTGGCTGCTCGGGGTAAAGAACTTCTGAAGAATACTTCAGTAAAGATATCTCATGGAAAACGATATGGTTTGATTGGGCCGAATGGAATGGGCAAGTCAACACTATTGAAGCTTCTTGCTTGGAGGAAGATACCGGTGCCTAAGAATATTGATGTCCTTCTGGTTGAGCAGGAGGTAGTTGGCGATGATAAAACAGCGCTTGAAGCTGTTGTTTCAGCTAATGTTGAACTTATTAAAATTCGACAAGAAGTTGCTGATCTACAAAATGCAGCTTCTGGTGAAGAAGGTGTGGATAAAAATGATACTAACGAGGAAGAGGATGCGGGAGAAAAGCTAGCAGAGCTGTATGAACAATTACAACTGATGGGGTCTGATGCTGCTGAATCTCAAGCGTCAAAGATTTTAGCTGGTCTGGGTTTTACAAAGGACATGCAGGGCCGTCCTACAAAATCCTTTAGTGGCGGCTGGAGGATGAGAATTTCTTTAGCTCGAGCACTTTTTGTGCAGCCCACTCTATTATTGCTTGATGAACCCACTAATCATCTTGACTTGAGGGCTGTTCTGTGGTTAGAGGAGTACTTGTGTCGTTGGAAGAAAACTTTGGTGGTTGTATCACACGATAGAGATTTTCTCAATACAGTATGCTCTGAGATTATTCATCTGCATGATTTGAAACTTCATTTCTATCGTGGAAATTTTGATGCTTTTGAGAGTGGGTATGAACAGCGTCGTAGAGAAGCGAATAAGAAGTATGAGACTTTTGACAAGCAATTGAAAGCAGCTAGAAGAACCGGGAACAAGGCTCAACAAGATAAGGTGAAGGACAGAGCTAAGTTTGCAGCAGCTAAGGAATCGAAAAGCAAAAGCAAGGGAAAGGGAAAGGTTGATGAGGATGAGACCCAAGTAGAGGTACCACACAAGTGGAGGGACTACAGCGTGGAGTTCCACTTTCCTGAACCTACTGAACTCACACCTCCACTTCTGCAGCTTATTGAAGTGAGCTTCAGTTACCCAAACCGAGAGGATTTTAGACTCTCGGATGTTGATGTTGGCATTGATATGGGGACTCGTGTTGCCATTGTTGGGCCTAATGGTGCTGGAAAATCTACACTGCTGAATCTTCTAGCTGGTGATTTGGTTCCAAGTGAAGGTGAAGTTCGAAGAAGTCAGAAGTTGAGGATAGGGAGATATTCCCAACACTTTGTGGACCTACTAACAATGGATGAAACACCTGTTCAGTACCTTCTTCGTCTCCATCCAGACCAGGAGGGGCTTAGTAAGCAAGAGGCTGTTCGTGCAAAACTTGGTAAATATGGGCTACCTAGTCATAATCATCTCACCCCCATTGTCAAACTATCAGGAGGGCAGAAAGCTCGGGTGGTGTTCACATCGATATCCATGTCAAGACCTCACATTTTATTGTTAGATGAACCCACAAATCATCTGGATATGCAAAGTATTGATGCACTGGCTGATGCGCTGGATGAATTCACTGGTGGAGTTGTTCTTGTTAGTCACGATTCTAGATTGATATCACGTGTCTGTGATGATGAAGAACGGAGTCAAATATGGGTTGTTGAAGATGGCACTGTCAGAAATTTCCCTGGAACATTTGAGGATTACAAGGATGATCTGCTGAAAGAGATTAAAGCTGAAGTTGATGATTGA
Protein sequence

>MS.gene92023.t1

MGKKKSEDAGPSTKAKPGSKDVSKKEKFSVSAMLAGMDEKADKPKKASSNKAKPKPPPKASAYTDDIDLPPSDDDESEEEQEEKHRPDLKPLEVSIAEKELKKREKKDILAAHVAEQAKKEALRDDRDAFTVVIGSRASVLDGDDGADANVKDITIENFSVAARGKELLKNTSVKISHGKRYGLIGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDKTALEAVVSANVELIKIRQEVADLQNAASGEEGVDKNDTNEEEDAGEKLAELYEQLQLMGSDAAESQASKILAGLGFTKDMQGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCSEIIHLHDLKLHFYRGNFDAFESGYEQRRREANKKYETFDKQLKAARRTGNKAQQDKVKDRAKFAAAKESKSKSKGKGKVDEDETQVEVPHKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFRLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPSEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKYGLPSHNHLTPIVKLSGGQKARVVFTSISMSRPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCDDEERSQIWVVEDGTVRNFPGTFEDYKDDLLKEIKAEVDD