Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92236.t1 | QDC33493.1 | 93.3 | 297 | 19 | 1 | 1 | 297 | 1 | 296 | 1.70E-132 | 482.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92236.t1 | Q9MA17 | 67.7 | 316 | 58 | 5 | 4 | 294 | 11 | 307 | 1.5e-81 | 304.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92236.t1 | A0A4Y5UMP1 | 93.3 | 297 | 19 | 1 | 1 | 297 | 1 | 296 | 1.2e-132 | 482.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene92236.t1 | TF | NAC |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051973 | MS.gene92236 | 0.817637 | 2.97E-52 | -1.69E-46 |
| MS.gene051996 | MS.gene92236 | 0.836485 | 9.11E-57 | -1.69E-46 |
| MS.gene052015 | MS.gene92236 | 0.803575 | 3.27E-49 | -1.69E-46 |
| MS.gene054742 | MS.gene92236 | 0.849282 | 3.57E-60 | -1.69E-46 |
| MS.gene056590 | MS.gene92236 | 0.805995 | 1.02E-49 | -1.69E-46 |
| MS.gene056591 | MS.gene92236 | 0.807124 | 5.89E-50 | -1.69E-46 |
| MS.gene056680 | MS.gene92236 | 0.826618 | 2.46E-54 | -1.69E-46 |
| MS.gene056920 | MS.gene92236 | 0.84278 | 2.10E-58 | -1.69E-46 |
| MS.gene056988 | MS.gene92236 | 0.804421 | 2.18E-49 | -1.69E-46 |
| MS.gene058418 | MS.gene92236 | 0.802004 | 6.89E-49 | -1.69E-46 |
| MS.gene058603 | MS.gene92236 | 0.809476 | 1.86E-50 | -1.69E-46 |
| MS.gene060087 | MS.gene92236 | 0.852948 | 3.30E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92236.t1 | MTR_2g062730 | 98.658 | 298 | 3 | 1 | 1 | 297 | 1 | 298 | 0.0 | 620 |
| MS.gene92236.t1 | MTR_8g024480 | 74.556 | 169 | 31 | 2 | 5 | 162 | 10 | 177 | 2.29e-90 | 275 |
| MS.gene92236.t1 | MTR_5g021710 | 56.148 | 244 | 97 | 4 | 5 | 239 | 3 | 245 | 6.65e-90 | 271 |
| MS.gene92236.t1 | MTR_4g035590 | 72.067 | 179 | 45 | 4 | 10 | 186 | 8 | 183 | 4.24e-89 | 270 |
| MS.gene92236.t1 | MTR_8g076110 | 47.751 | 289 | 120 | 5 | 7 | 293 | 3 | 262 | 5.43e-84 | 255 |
| MS.gene92236.t1 | MTR_4g036030 | 47.573 | 309 | 125 | 9 | 10 | 293 | 7 | 303 | 5.79e-84 | 256 |
| MS.gene92236.t1 | MTR_4g101680 | 48.701 | 308 | 116 | 8 | 10 | 292 | 7 | 297 | 1.19e-83 | 256 |
| MS.gene92236.t1 | MTR_5g012080 | 44.444 | 315 | 115 | 8 | 10 | 292 | 7 | 293 | 9.81e-80 | 246 |
| MS.gene92236.t1 | MTR_1g096430 | 69.481 | 154 | 46 | 1 | 7 | 160 | 4 | 156 | 1.86e-75 | 234 |
| MS.gene92236.t1 | MTR_3g109340 | 50.588 | 170 | 78 | 3 | 1 | 167 | 11 | 177 | 7.35e-59 | 192 |
| MS.gene92236.t1 | MTR_6g477900 | 57.051 | 156 | 61 | 4 | 8 | 160 | 4 | 156 | 1.34e-58 | 188 |
| MS.gene92236.t1 | MTR_6g084430 | 53.374 | 163 | 72 | 2 | 7 | 169 | 2 | 160 | 1.43e-58 | 191 |
| MS.gene92236.t1 | MTR_2g064090 | 53.846 | 156 | 67 | 3 | 8 | 160 | 4 | 157 | 4.22e-58 | 190 |
| MS.gene92236.t1 | MTR_3g435150 | 43.933 | 239 | 109 | 7 | 7 | 224 | 13 | 247 | 6.90e-58 | 188 |
| MS.gene92236.t1 | MTR_3g109340 | 50.292 | 171 | 78 | 4 | 1 | 167 | 11 | 178 | 1.98e-57 | 188 |
| MS.gene92236.t1 | MTR_2g080010 | 41.441 | 222 | 112 | 4 | 4 | 210 | 9 | 227 | 2.96e-57 | 188 |
| MS.gene92236.t1 | MTR_4g081870 | 46.970 | 198 | 94 | 4 | 2 | 193 | 1 | 193 | 3.09e-57 | 185 |
| MS.gene92236.t1 | MTR_2g078700 | 55.346 | 159 | 63 | 3 | 10 | 163 | 23 | 178 | 3.37e-57 | 189 |
| MS.gene92236.t1 | MTR_1g008740 | 47.343 | 207 | 96 | 7 | 7 | 205 | 10 | 211 | 4.27e-57 | 187 |
| MS.gene92236.t1 | MTR_1g008740 | 47.343 | 207 | 96 | 7 | 7 | 205 | 24 | 225 | 6.01e-57 | 187 |
| MS.gene92236.t1 | MTR_5g041940 | 48.148 | 189 | 86 | 5 | 8 | 190 | 1 | 183 | 1.86e-56 | 183 |
| MS.gene92236.t1 | MTR_4g108760 | 52.761 | 163 | 69 | 3 | 7 | 165 | 14 | 172 | 2.29e-56 | 186 |
| MS.gene92236.t1 | MTR_3g064580 | 53.846 | 156 | 67 | 3 | 8 | 160 | 4 | 157 | 3.08e-56 | 192 |
| MS.gene92236.t1 | MTR_7g085260 | 53.750 | 160 | 64 | 3 | 8 | 160 | 15 | 171 | 6.15e-55 | 183 |
| MS.gene92236.t1 | MTR_3g088110 | 51.220 | 164 | 70 | 3 | 5 | 163 | 2 | 160 | 7.42e-55 | 180 |
| MS.gene92236.t1 | MTR_5g076850 | 52.903 | 155 | 69 | 3 | 8 | 160 | 4 | 156 | 1.77e-54 | 187 |
| MS.gene92236.t1 | MTR_7g085220 | 47.368 | 171 | 73 | 3 | 4 | 160 | 2 | 169 | 2.31e-54 | 180 |
| MS.gene92236.t1 | MTR_6g032770 | 53.125 | 160 | 67 | 3 | 8 | 162 | 16 | 172 | 4.32e-54 | 181 |
| MS.gene92236.t1 | MTR_6g012670 | 50.595 | 168 | 75 | 3 | 2 | 165 | 12 | 175 | 6.28e-54 | 178 |
| MS.gene92236.t1 | MTR_3g070030 | 53.416 | 161 | 66 | 4 | 7 | 162 | 16 | 172 | 1.93e-53 | 178 |
| MS.gene92236.t1 | MTR_2g079990 | 50.595 | 168 | 74 | 4 | 6 | 171 | 12 | 172 | 2.36e-53 | 178 |
| MS.gene92236.t1 | MTR_3g096920 | 50.932 | 161 | 69 | 3 | 6 | 161 | 3 | 158 | 9.47e-53 | 174 |
| MS.gene92236.t1 | MTR_7g005280 | 45.263 | 190 | 91 | 4 | 1 | 189 | 6 | 183 | 1.12e-52 | 173 |
| MS.gene92236.t1 | MTR_8g059170 | 50.296 | 169 | 73 | 4 | 7 | 171 | 11 | 172 | 2.38e-52 | 174 |
| MS.gene92236.t1 | MTR_5g014300 | 50.920 | 163 | 68 | 4 | 6 | 160 | 2 | 160 | 4.60e-52 | 174 |
| MS.gene92236.t1 | MTR_8g094580 | 48.837 | 172 | 75 | 4 | 2 | 167 | 1 | 165 | 2.85e-51 | 170 |
| MS.gene92236.t1 | MTR_6g011860 | 45.029 | 171 | 80 | 3 | 12 | 171 | 17 | 184 | 3.22e-51 | 173 |
| MS.gene92236.t1 | MTR_2g064470 | 50.955 | 157 | 68 | 4 | 7 | 160 | 8 | 158 | 5.02e-51 | 170 |
| MS.gene92236.t1 | MTR_4g089135 | 43.889 | 180 | 72 | 3 | 10 | 163 | 15 | 191 | 8.24e-51 | 171 |
| MS.gene92236.t1 | MTR_7g100990 | 46.857 | 175 | 83 | 3 | 6 | 173 | 7 | 178 | 9.48e-51 | 170 |
| MS.gene92236.t1 | MTR_7g011130 | 51.176 | 170 | 62 | 4 | 13 | 165 | 22 | 187 | 1.03e-50 | 171 |
| MS.gene92236.t1 | MTR_3g116070 | 59.259 | 135 | 50 | 3 | 7 | 139 | 20 | 151 | 2.17e-50 | 170 |
| MS.gene92236.t1 | MTR_2157s0010 | 47.561 | 164 | 70 | 3 | 10 | 160 | 8 | 168 | 2.33e-50 | 167 |
| MS.gene92236.t1 | MTR_1g069805 | 48.795 | 166 | 79 | 4 | 9 | 173 | 9 | 169 | 2.42e-50 | 167 |
| MS.gene92236.t1 | MTR_2g093810 | 45.550 | 191 | 92 | 4 | 9 | 190 | 13 | 200 | 8.56e-50 | 167 |
| MS.gene92236.t1 | MTR_3g096140 | 50.658 | 152 | 71 | 3 | 12 | 161 | 9 | 158 | 9.31e-50 | 166 |
| MS.gene92236.t1 | MTR_2g079990 | 43.878 | 196 | 73 | 4 | 6 | 171 | 12 | 200 | 1.11e-49 | 169 |
| MS.gene92236.t1 | MTR_7g011120 | 53.416 | 161 | 60 | 4 | 13 | 162 | 11 | 167 | 1.49e-49 | 167 |
| MS.gene92236.t1 | MTR_8g063550 | 47.647 | 170 | 81 | 4 | 12 | 175 | 8 | 175 | 2.38e-49 | 167 |
| MS.gene92236.t1 | MTR_3g096920 | 51.316 | 152 | 69 | 2 | 6 | 157 | 3 | 149 | 3.12e-49 | 166 |
| MS.gene92236.t1 | MTR_4g098630 | 48.824 | 170 | 75 | 5 | 2 | 165 | 1 | 164 | 4.73e-49 | 166 |
| MS.gene92236.t1 | MTR_7g097090 | 51.656 | 151 | 67 | 4 | 9 | 158 | 9 | 154 | 7.42e-49 | 164 |
| MS.gene92236.t1 | MTR_3g096140 | 50.658 | 152 | 71 | 3 | 12 | 161 | 9 | 158 | 7.91e-49 | 166 |
| MS.gene92236.t1 | MTR_8g063550 | 47.647 | 170 | 81 | 4 | 12 | 175 | 8 | 175 | 8.50e-49 | 168 |
| MS.gene92236.t1 | MTR_8g063550 | 47.647 | 170 | 81 | 4 | 12 | 175 | 8 | 175 | 1.69e-48 | 167 |
| MS.gene92236.t1 | MTR_5g069030 | 52.258 | 155 | 70 | 3 | 10 | 162 | 25 | 177 | 3.89e-48 | 170 |
| MS.gene92236.t1 | MTR_8g467490 | 46.012 | 163 | 73 | 3 | 12 | 162 | 16 | 175 | 4.74e-48 | 165 |
| MS.gene92236.t1 | MTR_1g090720 | 48.315 | 178 | 78 | 4 | 9 | 174 | 41 | 216 | 5.77e-48 | 167 |
| MS.gene92236.t1 | MTR_3g093040 | 47.134 | 157 | 79 | 3 | 8 | 162 | 106 | 260 | 4.12e-47 | 160 |
| MS.gene92236.t1 | MTR_5g040420 | 41.799 | 189 | 94 | 4 | 9 | 186 | 13 | 196 | 4.54e-47 | 162 |
| MS.gene92236.t1 | MTR_1g097300 | 47.682 | 151 | 75 | 3 | 12 | 160 | 21 | 169 | 2.46e-46 | 164 |
| MS.gene92236.t1 | MTR_4g134460 | 48.026 | 152 | 76 | 1 | 9 | 160 | 53 | 201 | 3.97e-46 | 161 |
| MS.gene92236.t1 | MTR_3g093050 | 49.359 | 156 | 75 | 3 | 9 | 162 | 21 | 174 | 6.59e-46 | 163 |
| MS.gene92236.t1 | MTR_3g093050 | 49.359 | 156 | 75 | 3 | 9 | 162 | 21 | 174 | 1.01e-45 | 163 |
| MS.gene92236.t1 | MTR_8g093580 | 45.882 | 170 | 84 | 4 | 12 | 175 | 8 | 175 | 5.26e-45 | 159 |
| MS.gene92236.t1 | MTR_1g090723 | 46.199 | 171 | 82 | 5 | 12 | 174 | 10 | 178 | 1.08e-44 | 160 |
| MS.gene92236.t1 | MTR_0036s0150 | 46.753 | 154 | 78 | 4 | 12 | 163 | 7 | 158 | 2.15e-44 | 158 |
| MS.gene92236.t1 | MTR_3g070040 | 48.750 | 160 | 65 | 4 | 14 | 165 | 12 | 162 | 1.42e-43 | 152 |
| MS.gene92236.t1 | MTR_1g090723 | 45.294 | 170 | 84 | 5 | 12 | 174 | 10 | 177 | 1.74e-43 | 157 |
| MS.gene92236.t1 | MTR_2g068880 | 43.605 | 172 | 78 | 5 | 6 | 160 | 17 | 186 | 1.75e-43 | 151 |
| MS.gene92236.t1 | MTR_2g086880 | 50.658 | 152 | 65 | 4 | 12 | 163 | 20 | 161 | 2.36e-43 | 156 |
| MS.gene92236.t1 | MTR_1g090723 | 45.294 | 170 | 84 | 5 | 12 | 174 | 10 | 177 | 2.44e-43 | 157 |
| MS.gene92236.t1 | MTR_2g086880 | 50.658 | 152 | 65 | 4 | 12 | 163 | 20 | 161 | 2.49e-43 | 155 |
| MS.gene92236.t1 | MTR_2g068920 | 41.989 | 181 | 86 | 5 | 10 | 173 | 20 | 198 | 6.01e-43 | 149 |
| MS.gene92236.t1 | MTR_4g075980 | 46.707 | 167 | 81 | 5 | 12 | 176 | 17 | 177 | 1.89e-42 | 148 |
| MS.gene92236.t1 | MTR_5g090970 | 40.782 | 179 | 90 | 4 | 9 | 174 | 17 | 192 | 1.07e-41 | 146 |
| MS.gene92236.t1 | MTR_8g099750 | 40.000 | 190 | 101 | 4 | 5 | 186 | 9 | 193 | 4.10e-41 | 142 |
| MS.gene92236.t1 | MTR_5g090970 | 40.223 | 179 | 90 | 4 | 9 | 174 | 17 | 191 | 3.58e-40 | 142 |
| MS.gene92236.t1 | MTR_3g096140 | 47.826 | 138 | 68 | 3 | 26 | 161 | 2 | 137 | 1.74e-39 | 141 |
| MS.gene92236.t1 | MTR_3g098810 | 42.105 | 171 | 83 | 4 | 5 | 164 | 9 | 174 | 1.45e-38 | 136 |
| MS.gene92236.t1 | MTR_2g086690 | 37.766 | 188 | 101 | 5 | 11 | 186 | 5 | 188 | 4.12e-36 | 130 |
| MS.gene92236.t1 | MTR_3g098810 | 45.652 | 138 | 67 | 3 | 5 | 139 | 9 | 141 | 1.29e-34 | 124 |
| MS.gene92236.t1 | MTR_4g052620 | 36.508 | 189 | 104 | 6 | 7 | 182 | 2 | 187 | 5.20e-34 | 125 |
| MS.gene92236.t1 | MTR_8g023840 | 48.462 | 130 | 63 | 4 | 10 | 137 | 11 | 138 | 1.62e-32 | 124 |
| MS.gene92236.t1 | MTR_8g023860 | 45.333 | 150 | 75 | 5 | 10 | 157 | 12 | 156 | 1.39e-31 | 122 |
| MS.gene92236.t1 | MTR_8g094580 | 50.926 | 108 | 45 | 2 | 66 | 167 | 6 | 111 | 2.50e-31 | 117 |
| MS.gene92236.t1 | MTR_4g094302 | 36.364 | 165 | 85 | 5 | 10 | 165 | 11 | 164 | 2.96e-31 | 115 |
| MS.gene92236.t1 | MTR_4g094302 | 41.221 | 131 | 65 | 4 | 10 | 139 | 11 | 130 | 5.87e-29 | 108 |
| MS.gene92236.t1 | MTR_8g023900 | 41.011 | 178 | 87 | 7 | 9 | 179 | 187 | 353 | 7.36e-29 | 115 |
| MS.gene92236.t1 | MTR_8g023900 | 42.675 | 157 | 79 | 7 | 9 | 160 | 11 | 161 | 5.00e-28 | 112 |
| MS.gene92236.t1 | MTR_8g023930 | 40.223 | 179 | 95 | 7 | 10 | 181 | 24 | 197 | 8.86e-29 | 115 |
| MS.gene92236.t1 | MTR_7g105170 | 36.310 | 168 | 97 | 3 | 10 | 167 | 4 | 171 | 2.30e-28 | 110 |
| MS.gene92236.t1 | MTR_7g070140 | 53.947 | 76 | 34 | 1 | 66 | 140 | 17 | 92 | 1.21e-23 | 94.4 |
| MS.gene92236.t1 | MTR_8g023880 | 37.500 | 168 | 80 | 7 | 9 | 160 | 6 | 164 | 9.55e-23 | 95.1 |
| MS.gene92236.t1 | MTR_8g093790 | 34.161 | 161 | 84 | 6 | 1 | 161 | 1 | 139 | 8.94e-22 | 90.5 |
| MS.gene92236.t1 | MTR_3g096400 | 31.928 | 166 | 89 | 6 | 8 | 159 | 5 | 160 | 2.96e-21 | 89.7 |
| MS.gene92236.t1 | MTR_7g083360 | 29.927 | 137 | 92 | 3 | 1 | 137 | 1 | 133 | 1.08e-15 | 73.6 |
| MS.gene92236.t1 | MTR_7g070150 | 58.000 | 50 | 20 | 1 | 111 | 160 | 9 | 57 | 2.51e-15 | 70.5 |
| MS.gene92236.t1 | MTR_7g083330 | 30.769 | 130 | 86 | 3 | 8 | 137 | 16 | 141 | 4.14e-13 | 67.0 |
| MS.gene92236.t1 | MTR_4g078875 | 31.737 | 167 | 88 | 7 | 10 | 158 | 48 | 206 | 4.86e-11 | 62.8 |
| MS.gene92236.t1 | MTR_7g083370 | 26.761 | 142 | 100 | 3 | 1 | 142 | 1 | 138 | 5.96e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92236.t1 | AT1G79580 | 60.312 | 320 | 75 | 9 | 2 | 292 | 9 | 305 | 1.11e-112 | 330 |
| MS.gene92236.t1 | AT1G79580 | 60.312 | 320 | 75 | 9 | 2 | 292 | 9 | 305 | 1.11e-112 | 330 |
| MS.gene92236.t1 | AT1G79580 | 60.312 | 320 | 75 | 9 | 2 | 292 | 9 | 305 | 1.11e-112 | 330 |
| MS.gene92236.t1 | AT1G79580 | 60.312 | 320 | 75 | 9 | 2 | 292 | 9 | 305 | 1.11e-112 | 330 |
| MS.gene92236.t1 | AT1G79580 | 60.312 | 320 | 75 | 9 | 2 | 292 | 9 | 305 | 1.11e-112 | 330 |
| MS.gene92236.t1 | AT4G10350 | 50.637 | 314 | 119 | 10 | 2 | 295 | 1 | 298 | 1.62e-93 | 280 |
| MS.gene92236.t1 | AT2G18060 | 48.052 | 308 | 137 | 6 | 2 | 293 | 1 | 301 | 2.80e-93 | 281 |
| MS.gene92236.t1 | AT2G18060 | 48.052 | 308 | 137 | 6 | 2 | 293 | 1 | 301 | 2.80e-93 | 281 |
| MS.gene92236.t1 | AT4G36160 | 48.276 | 319 | 124 | 9 | 9 | 298 | 13 | 319 | 5.20e-91 | 275 |
| MS.gene92236.t1 | AT4G36160 | 48.276 | 319 | 124 | 9 | 9 | 298 | 9 | 315 | 6.24e-91 | 275 |
| MS.gene92236.t1 | AT4G36160 | 48.276 | 319 | 124 | 9 | 9 | 298 | 9 | 315 | 6.24e-91 | 275 |
| MS.gene92236.t1 | AT1G32770 | 48.232 | 311 | 113 | 7 | 5 | 291 | 11 | 297 | 4.64e-87 | 265 |
| MS.gene92236.t1 | AT1G33280 | 75.817 | 153 | 35 | 2 | 10 | 162 | 8 | 158 | 3.62e-86 | 260 |
| MS.gene92236.t1 | AT2G46770 | 66.851 | 181 | 44 | 3 | 6 | 171 | 12 | 191 | 9.33e-86 | 261 |
| MS.gene92236.t1 | AT3G61910 | 68.786 | 173 | 38 | 3 | 5 | 162 | 6 | 177 | 1.43e-82 | 252 |
| MS.gene92236.t1 | AT5G66300 | 45.752 | 306 | 124 | 10 | 9 | 298 | 11 | 290 | 7.24e-81 | 246 |
| MS.gene92236.t1 | AT1G12260 | 72.368 | 152 | 41 | 1 | 10 | 161 | 7 | 157 | 3.14e-80 | 246 |
| MS.gene92236.t1 | AT1G12260 | 72.368 | 152 | 41 | 1 | 10 | 161 | 7 | 157 | 4.44e-80 | 248 |
| MS.gene92236.t1 | AT1G62700 | 73.026 | 152 | 40 | 1 | 10 | 161 | 7 | 157 | 1.34e-79 | 247 |
| MS.gene92236.t1 | AT1G62700 | 73.026 | 152 | 40 | 1 | 10 | 161 | 7 | 157 | 1.34e-79 | 247 |
| MS.gene92236.t1 | AT1G71930 | 52.586 | 232 | 97 | 6 | 9 | 228 | 8 | 238 | 9.79e-78 | 239 |
| MS.gene92236.t1 | AT1G71930 | 52.586 | 232 | 97 | 6 | 9 | 228 | 8 | 238 | 9.79e-78 | 239 |
| MS.gene92236.t1 | AT5G62380 | 65.823 | 158 | 53 | 1 | 10 | 167 | 7 | 163 | 6.00e-77 | 238 |
| MS.gene92236.t1 | AT5G62380 | 65.823 | 158 | 53 | 1 | 10 | 167 | 7 | 163 | 6.00e-77 | 238 |
| MS.gene92236.t1 | AT4G10350 | 46.743 | 261 | 103 | 10 | 55 | 295 | 7 | 251 | 1.75e-61 | 197 |
| MS.gene92236.t1 | AT2G24430 | 55.215 | 163 | 68 | 3 | 7 | 167 | 13 | 172 | 4.35e-60 | 194 |
| MS.gene92236.t1 | AT2G24430 | 55.215 | 163 | 68 | 3 | 7 | 167 | 13 | 172 | 4.35e-60 | 194 |
| MS.gene92236.t1 | AT3G17730 | 54.217 | 166 | 70 | 4 | 8 | 170 | 4 | 166 | 4.48e-59 | 189 |
| MS.gene92236.t1 | AT1G69490 | 50.000 | 170 | 75 | 3 | 2 | 165 | 1 | 166 | 1.98e-58 | 188 |
| MS.gene92236.t1 | AT5G07680 | 57.325 | 157 | 59 | 3 | 8 | 160 | 1 | 153 | 4.32e-58 | 189 |
| MS.gene92236.t1 | AT5G07680 | 56.962 | 158 | 60 | 3 | 7 | 160 | 14 | 167 | 4.54e-58 | 189 |
| MS.gene92236.t1 | AT3G18400 | 42.424 | 264 | 114 | 8 | 7 | 242 | 2 | 255 | 6.39e-58 | 188 |
| MS.gene92236.t1 | AT5G39610 | 53.333 | 165 | 69 | 3 | 1 | 161 | 11 | 171 | 3.62e-57 | 186 |
| MS.gene92236.t1 | AT5G61430 | 55.696 | 158 | 62 | 3 | 7 | 160 | 13 | 166 | 5.22e-57 | 187 |
| MS.gene92236.t1 | AT1G76420 | 55.128 | 156 | 65 | 3 | 7 | 160 | 19 | 171 | 6.27e-57 | 186 |
| MS.gene92236.t1 | AT1G65910 | 49.724 | 181 | 83 | 4 | 8 | 186 | 4 | 178 | 7.84e-57 | 193 |
| MS.gene92236.t1 | AT1G61110 | 46.154 | 182 | 81 | 2 | 4 | 171 | 10 | 188 | 1.14e-56 | 186 |
| MS.gene92236.t1 | AT1G77450 | 48.315 | 178 | 82 | 3 | 1 | 173 | 1 | 173 | 2.71e-56 | 182 |
| MS.gene92236.t1 | AT5G17260 | 55.128 | 156 | 65 | 3 | 8 | 160 | 4 | 157 | 2.94e-56 | 189 |
| MS.gene92236.t1 | AT5G18270 | 48.223 | 197 | 89 | 5 | 4 | 193 | 14 | 204 | 3.05e-56 | 185 |
| MS.gene92236.t1 | AT5G18270 | 47.716 | 197 | 90 | 5 | 4 | 193 | 14 | 204 | 1.19e-55 | 183 |
| MS.gene92236.t1 | AT3G03200 | 55.769 | 156 | 64 | 3 | 8 | 160 | 4 | 157 | 1.20e-55 | 187 |
| MS.gene92236.t1 | AT3G04060 | 53.503 | 157 | 66 | 2 | 8 | 160 | 18 | 171 | 4.23e-55 | 182 |
| MS.gene92236.t1 | AT1G54330 | 55.484 | 155 | 66 | 3 | 6 | 160 | 2 | 153 | 4.78e-55 | 181 |
| MS.gene92236.t1 | AT3G15170 | 53.086 | 162 | 68 | 3 | 7 | 163 | 17 | 175 | 8.80e-55 | 180 |
| MS.gene92236.t1 | AT3G29035 | 54.037 | 161 | 66 | 3 | 2 | 158 | 16 | 172 | 1.10e-54 | 180 |
| MS.gene92236.t1 | AT5G46590 | 54.430 | 158 | 68 | 2 | 6 | 160 | 2 | 158 | 1.59e-54 | 179 |
| MS.gene92236.t1 | AT5G63790 | 47.727 | 176 | 80 | 3 | 6 | 174 | 56 | 226 | 8.83e-54 | 178 |
| MS.gene92236.t1 | AT5G63790 | 47.727 | 176 | 80 | 3 | 6 | 174 | 46 | 216 | 9.95e-54 | 177 |
| MS.gene92236.t1 | AT3G04070 | 45.685 | 197 | 83 | 4 | 1 | 176 | 1 | 194 | 1.29e-53 | 178 |
| MS.gene92236.t1 | AT5G53950 | 53.205 | 156 | 65 | 3 | 10 | 160 | 17 | 169 | 1.71e-53 | 179 |
| MS.gene92236.t1 | AT4G27410 | 47.826 | 184 | 86 | 5 | 6 | 187 | 10 | 185 | 7.02e-53 | 175 |
| MS.gene92236.t1 | AT3G15500 | 49.375 | 160 | 75 | 3 | 6 | 163 | 10 | 165 | 1.06e-52 | 175 |
| MS.gene92236.t1 | AT5G08790 | 50.595 | 168 | 71 | 4 | 7 | 167 | 4 | 166 | 1.31e-52 | 174 |
| MS.gene92236.t1 | AT5G46590 | 57.447 | 141 | 59 | 1 | 6 | 146 | 2 | 141 | 1.82e-52 | 173 |
| MS.gene92236.t1 | AT1G52890 | 49.686 | 159 | 74 | 3 | 7 | 163 | 11 | 165 | 2.89e-52 | 174 |
| MS.gene92236.t1 | AT3G12977 | 52.229 | 157 | 68 | 3 | 7 | 160 | 15 | 167 | 6.06e-52 | 172 |
| MS.gene92236.t1 | AT3G04070 | 43.192 | 213 | 81 | 5 | 1 | 176 | 1 | 210 | 1.06e-51 | 174 |
| MS.gene92236.t1 | AT1G01720 | 46.409 | 181 | 78 | 4 | 8 | 174 | 5 | 180 | 1.44e-51 | 171 |
| MS.gene92236.t1 | AT5G04410 | 51.534 | 163 | 74 | 4 | 4 | 163 | 2 | 162 | 1.59e-51 | 178 |
| MS.gene92236.t1 | AT3G15510 | 39.713 | 209 | 100 | 5 | 14 | 202 | 21 | 223 | 8.00e-51 | 172 |
| MS.gene92236.t1 | AT3G10500 | 51.534 | 163 | 74 | 4 | 4 | 163 | 2 | 162 | 9.12e-51 | 176 |
| MS.gene92236.t1 | AT3G10490 | 49.133 | 173 | 79 | 4 | 9 | 174 | 26 | 196 | 1.32e-50 | 167 |
| MS.gene92236.t1 | AT5G24590 | 51.923 | 156 | 72 | 2 | 9 | 162 | 12 | 166 | 1.49e-50 | 173 |
| MS.gene92236.t1 | AT2G33480 | 48.466 | 163 | 77 | 2 | 2 | 164 | 7 | 162 | 1.66e-50 | 168 |
| MS.gene92236.t1 | AT4G27410 | 45.455 | 198 | 87 | 6 | 6 | 187 | 10 | 202 | 6.67e-50 | 168 |
| MS.gene92236.t1 | AT2G33480 | 49.091 | 165 | 75 | 3 | 2 | 164 | 7 | 164 | 6.86e-50 | 166 |
| MS.gene92236.t1 | AT3G10480 | 51.592 | 157 | 71 | 3 | 9 | 162 | 26 | 180 | 6.89e-50 | 171 |
| MS.gene92236.t1 | AT3G10490 | 50.617 | 162 | 75 | 3 | 4 | 162 | 21 | 180 | 3.43e-49 | 169 |
| MS.gene92236.t1 | AT5G39820 | 37.023 | 262 | 113 | 8 | 9 | 243 | 19 | 255 | 5.80e-49 | 166 |
| MS.gene92236.t1 | AT4G17980 | 51.875 | 160 | 71 | 4 | 6 | 160 | 2 | 160 | 1.08e-48 | 163 |
| MS.gene92236.t1 | AT5G13180 | 49.057 | 159 | 73 | 3 | 5 | 161 | 9 | 161 | 2.70e-48 | 162 |
| MS.gene92236.t1 | AT4G17980 | 51.875 | 160 | 71 | 4 | 6 | 160 | 2 | 160 | 3.72e-48 | 162 |
| MS.gene92236.t1 | AT2G43000 | 48.101 | 158 | 75 | 3 | 12 | 166 | 20 | 173 | 4.16e-48 | 162 |
| MS.gene92236.t1 | AT3G10480 | 51.592 | 157 | 70 | 4 | 9 | 162 | 26 | 179 | 5.48e-48 | 166 |
| MS.gene92236.t1 | AT1G26870 | 46.951 | 164 | 72 | 3 | 12 | 163 | 18 | 178 | 7.61e-48 | 165 |
| MS.gene92236.t1 | AT1G56010 | 48.750 | 160 | 72 | 4 | 7 | 160 | 16 | 171 | 1.75e-47 | 162 |
| MS.gene92236.t1 | AT5G09330 | 40.179 | 224 | 120 | 6 | 6 | 220 | 2 | 220 | 2.30e-47 | 166 |
| MS.gene92236.t1 | AT5G09330 | 40.179 | 224 | 120 | 6 | 6 | 220 | 2 | 220 | 2.30e-47 | 166 |
| MS.gene92236.t1 | AT5G09330 | 40.179 | 224 | 120 | 6 | 6 | 220 | 2 | 220 | 2.30e-47 | 166 |
| MS.gene92236.t1 | AT5G09330 | 40.179 | 224 | 120 | 6 | 6 | 220 | 2 | 220 | 2.30e-47 | 166 |
| MS.gene92236.t1 | AT5G09330 | 40.179 | 224 | 120 | 6 | 6 | 220 | 2 | 220 | 2.30e-47 | 166 |
| MS.gene92236.t1 | AT3G49530 | 47.742 | 155 | 78 | 2 | 9 | 161 | 12 | 165 | 2.31e-47 | 164 |
| MS.gene92236.t1 | AT3G49530 | 47.742 | 155 | 78 | 2 | 9 | 161 | 12 | 165 | 5.87e-47 | 164 |
| MS.gene92236.t1 | AT2G02450 | 44.199 | 181 | 88 | 2 | 10 | 190 | 51 | 218 | 8.33e-47 | 161 |
| MS.gene92236.t1 | AT2G02450 | 44.199 | 181 | 88 | 2 | 10 | 190 | 51 | 218 | 1.27e-46 | 162 |
| MS.gene92236.t1 | AT4G28530 | 48.521 | 169 | 63 | 7 | 10 | 160 | 10 | 172 | 1.82e-45 | 157 |
| MS.gene92236.t1 | AT1G52880 | 40.090 | 222 | 107 | 6 | 14 | 217 | 21 | 234 | 2.57e-45 | 156 |
| MS.gene92236.t1 | AT3G10480 | 43.386 | 189 | 71 | 3 | 9 | 162 | 26 | 213 | 3.46e-45 | 160 |
| MS.gene92236.t1 | AT5G64060 | 43.750 | 176 | 91 | 4 | 6 | 175 | 2 | 175 | 4.65e-45 | 156 |
| MS.gene92236.t1 | AT1G33060 | 47.337 | 169 | 83 | 4 | 9 | 173 | 23 | 189 | 9.08e-45 | 161 |
| MS.gene92236.t1 | AT1G33060 | 47.337 | 169 | 83 | 4 | 9 | 173 | 23 | 189 | 9.81e-45 | 161 |
| MS.gene92236.t1 | AT4G35580 | 49.359 | 156 | 75 | 3 | 9 | 162 | 8 | 161 | 1.76e-44 | 158 |
| MS.gene92236.t1 | AT4G35580 | 49.359 | 156 | 75 | 3 | 9 | 162 | 8 | 161 | 2.37e-44 | 158 |
| MS.gene92236.t1 | AT4G35580 | 49.359 | 156 | 75 | 3 | 9 | 162 | 8 | 161 | 2.53e-44 | 158 |
| MS.gene92236.t1 | AT1G32510 | 46.250 | 160 | 76 | 3 | 10 | 160 | 6 | 164 | 3.36e-44 | 152 |
| MS.gene92236.t1 | AT5G22290 | 41.899 | 179 | 97 | 3 | 9 | 187 | 20 | 191 | 4.20e-43 | 151 |
| MS.gene92236.t1 | AT1G34190 | 43.709 | 151 | 81 | 3 | 12 | 160 | 18 | 166 | 5.92e-43 | 155 |
| MS.gene92236.t1 | AT2G27300 | 40.113 | 177 | 93 | 4 | 2 | 173 | 1 | 169 | 2.31e-42 | 149 |
| MS.gene92236.t1 | AT1G34180 | 41.722 | 151 | 84 | 3 | 12 | 160 | 18 | 166 | 1.13e-41 | 149 |
| MS.gene92236.t1 | AT2G17040 | 43.636 | 165 | 85 | 4 | 12 | 174 | 8 | 166 | 1.90e-41 | 145 |
| MS.gene92236.t1 | AT1G34180 | 41.722 | 151 | 84 | 3 | 12 | 160 | 18 | 166 | 2.37e-41 | 150 |
| MS.gene92236.t1 | AT3G44290 | 44.079 | 152 | 75 | 4 | 12 | 163 | 16 | 157 | 8.67e-40 | 139 |
| MS.gene92236.t1 | AT1G34180 | 39.877 | 163 | 82 | 5 | 12 | 160 | 18 | 178 | 1.40e-39 | 144 |
| MS.gene92236.t1 | AT1G34180 | 39.877 | 163 | 82 | 5 | 12 | 160 | 18 | 178 | 2.42e-39 | 145 |
| MS.gene92236.t1 | AT5G04395 | 45.860 | 157 | 73 | 2 | 1 | 145 | 19 | 175 | 4.38e-39 | 136 |
| MS.gene92236.t1 | AT2G18060 | 38.356 | 219 | 112 | 6 | 91 | 293 | 2 | 213 | 4.68e-39 | 139 |
| MS.gene92236.t1 | AT3G44290 | 44.079 | 152 | 75 | 4 | 12 | 163 | 16 | 157 | 5.38e-39 | 140 |
| MS.gene92236.t1 | AT3G12910 | 40.331 | 181 | 84 | 5 | 12 | 173 | 23 | 198 | 1.97e-38 | 137 |
| MS.gene92236.t1 | AT5G61430 | 59.596 | 99 | 35 | 2 | 66 | 160 | 6 | 103 | 2.35e-36 | 131 |
| MS.gene92236.t1 | AT1G32870 | 41.772 | 158 | 84 | 4 | 10 | 163 | 10 | 163 | 9.05e-35 | 132 |
| MS.gene92236.t1 | AT1G32870 | 41.772 | 158 | 84 | 4 | 10 | 163 | 10 | 163 | 9.93e-35 | 132 |
| MS.gene92236.t1 | AT1G32870 | 41.772 | 158 | 84 | 4 | 10 | 163 | 46 | 199 | 1.44e-34 | 132 |
| MS.gene92236.t1 | AT3G12977 | 54.128 | 109 | 43 | 3 | 55 | 160 | 10 | 114 | 1.08e-33 | 123 |
| MS.gene92236.t1 | AT1G56010 | 55.102 | 98 | 38 | 2 | 68 | 160 | 8 | 104 | 4.34e-32 | 120 |
| MS.gene92236.t1 | AT5G22380 | 36.364 | 176 | 97 | 6 | 7 | 172 | 4 | 174 | 2.48e-29 | 112 |
| MS.gene92236.t1 | AT3G44350 | 33.333 | 189 | 111 | 6 | 7 | 187 | 4 | 185 | 3.33e-29 | 112 |
| MS.gene92236.t1 | AT2G33480 | 50.000 | 106 | 50 | 2 | 61 | 164 | 3 | 107 | 4.59e-29 | 110 |
| MS.gene92236.t1 | AT5G64530 | 35.882 | 170 | 77 | 6 | 8 | 160 | 1 | 155 | 3.76e-27 | 105 |
| MS.gene92236.t1 | AT3G44350 | 40.146 | 137 | 72 | 4 | 7 | 138 | 4 | 135 | 6.61e-27 | 103 |
| MS.gene92236.t1 | AT5G64530 | 41.481 | 135 | 63 | 5 | 8 | 141 | 1 | 120 | 1.28e-26 | 102 |
| MS.gene92236.t1 | AT1G02230 | 44.275 | 131 | 65 | 5 | 11 | 137 | 4 | 130 | 2.66e-25 | 103 |
| MS.gene92236.t1 | AT4G28530 | 42.017 | 119 | 48 | 4 | 10 | 111 | 10 | 124 | 4.69e-25 | 102 |
| MS.gene92236.t1 | AT3G04420 | 41.860 | 129 | 71 | 4 | 11 | 137 | 4 | 130 | 7.69e-24 | 99.0 |
| MS.gene92236.t1 | AT4G01520 | 37.423 | 163 | 93 | 6 | 11 | 168 | 5 | 163 | 1.01e-23 | 98.6 |
| MS.gene92236.t1 | AT3G04420 | 41.860 | 129 | 71 | 4 | 11 | 137 | 4 | 130 | 1.45e-23 | 99.0 |
| MS.gene92236.t1 | AT4G01540 | 37.654 | 162 | 90 | 7 | 13 | 168 | 7 | 163 | 5.96e-23 | 97.8 |
| MS.gene92236.t1 | AT4G01550 | 37.086 | 151 | 88 | 4 | 13 | 160 | 7 | 153 | 6.49e-23 | 98.6 |
| MS.gene92236.t1 | AT4G01540 | 37.654 | 162 | 90 | 7 | 13 | 168 | 7 | 163 | 7.69e-23 | 97.8 |
| MS.gene92236.t1 | AT4G01540 | 37.654 | 162 | 90 | 7 | 13 | 168 | 7 | 163 | 7.81e-23 | 97.8 |
| MS.gene92236.t1 | AT4G01540 | 37.654 | 162 | 90 | 7 | 13 | 168 | 7 | 163 | 9.49e-23 | 98.2 |
| MS.gene92236.t1 | AT1G02250 | 42.424 | 132 | 66 | 5 | 11 | 137 | 4 | 130 | 1.12e-21 | 94.0 |
| MS.gene92236.t1 | AT1G02220 | 41.667 | 132 | 70 | 5 | 8 | 137 | 1 | 127 | 4.04e-21 | 92.8 |
| MS.gene92236.t1 | AT2G43000 | 44.681 | 94 | 48 | 2 | 75 | 165 | 2 | 94 | 4.43e-21 | 89.4 |
| MS.gene92236.t1 | AT3G10490 | 51.250 | 80 | 35 | 2 | 86 | 162 | 2 | 80 | 1.01e-20 | 91.3 |
| MS.gene92236.t1 | AT3G10490 | 51.250 | 80 | 35 | 2 | 86 | 162 | 2 | 80 | 1.01e-20 | 91.3 |
| MS.gene92236.t1 | AT5G50820 | 35.461 | 141 | 65 | 6 | 8 | 139 | 15 | 138 | 8.98e-19 | 82.8 |
| MS.gene92236.t1 | AT1G01010 | 35.065 | 154 | 85 | 7 | 13 | 157 | 6 | 153 | 3.48e-18 | 84.7 |
| MS.gene92236.t1 | AT5G14000 | 30.000 | 190 | 119 | 6 | 6 | 190 | 11 | 191 | 1.82e-17 | 79.7 |
| MS.gene92236.t1 | AT5G22290 | 37.864 | 103 | 59 | 2 | 92 | 194 | 2 | 99 | 2.35e-16 | 77.4 |
| MS.gene92236.t1 | AT3G56530 | 26.623 | 154 | 108 | 3 | 7 | 158 | 49 | 199 | 6.18e-15 | 74.3 |
| MS.gene92236.t1 | AT5G14000 | 29.932 | 147 | 95 | 3 | 6 | 150 | 11 | 151 | 1.83e-14 | 70.1 |
| MS.gene92236.t1 | AT3G04430 | 35.075 | 134 | 71 | 5 | 16 | 137 | 6 | 135 | 4.73e-12 | 64.3 |
Find 73 sgRNAs with CRISPR-Local
Find 99 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATCTCACAATGGAATTAA+TGG | 0.238444 | 2.1:-33231635 | MS.gene92236:CDS |
| TTTCCTCATTCCAATCCTTT+TGG | 0.284680 | 2.1:+33232330 | None:intergenic |
| TAACAGTTCCTCCAGGGTTT+AGG | 0.294791 | 2.1:-33233180 | MS.gene92236:CDS |
| GAGCAACTACAGCTGGGTTT+TGG | 0.302263 | 2.1:-33232393 | MS.gene92236:CDS |
| GGTGCAGCTATGGCTGATTC+TGG | 0.322628 | 2.1:+33231824 | None:intergenic |
| GGATGTCCATGGATGAATTA+TGG | 0.328272 | 2.1:+33231789 | None:intergenic |
| TTTGGAATTGGTGTGATATA+TGG | 0.337061 | 2.1:+33232348 | None:intergenic |
| CTTCTTCTTCAATTTCTTGT+TGG | 0.338565 | 2.1:+33232005 | None:intergenic |
| TGCATGTGATGATGATGTTT+TGG | 0.354863 | 2.1:+33231926 | None:intergenic |
| AACACCACCACCACCTTTGA+TGG | 0.356402 | 2.1:-33231875 | MS.gene92236:CDS |
| CTATTTGTTCTTGTTCCTGT+TGG | 0.367370 | 2.1:+33232415 | None:intergenic |
| TGGTGGTGATTGGTCATTCT+TGG | 0.375350 | 2.1:-33231669 | MS.gene92236:CDS |
| TATTTGTTCTTGTTCCTGTT+GGG | 0.389319 | 2.1:+33232416 | None:intergenic |
| TGATGATAATGCAGAAGTTC+AGG | 0.405616 | 2.1:-33232230 | MS.gene92236:intron |
| TTTGGTTCTAGAAAATGGTT+TGG | 0.426326 | 2.1:+33231944 | None:intergenic |
| ATCTCAACAGACTTGAGCCT+TGG | 0.426871 | 2.1:-33233066 | MS.gene92236:CDS |
| GATAAGTGTAGGATTGGATC+AGG | 0.432547 | 2.1:-33232484 | MS.gene92236:CDS |
| CTCATGGTCACAAAACTGAT+TGG | 0.440810 | 2.1:-33232279 | MS.gene92236:CDS |
| CACACCAATTCCAAAAGGAT+TGG | 0.463232 | 2.1:-33232340 | MS.gene92236:CDS |
| ACAAATAGAGCAACTACAGC+TGG | 0.470753 | 2.1:-33232400 | MS.gene92236:CDS |
| GTTGCAGATAAGTGTAGGAT+TGG | 0.472884 | 2.1:-33232490 | MS.gene92236:intron |
| TCTCAACAGACTTGAGCCTT+GGG | 0.476536 | 2.1:-33233065 | MS.gene92236:CDS |
| AAGATGGATGGGTAGTATGC+AGG | 0.497034 | 2.1:-33232060 | MS.gene92236:CDS |
| GGAAGTTGGTGGTGCAGCTA+TGG | 0.512854 | 2.1:+33231814 | None:intergenic |
| GATGAATTATGGAAGGAAGT+TGG | 0.514483 | 2.1:+33231800 | None:intergenic |
| TCTGATAACATCAAGATCAA+TGG | 0.515700 | 2.1:+33233096 | None:intergenic |
| TACAGAATGATGCAAGGAAG+TGG | 0.516848 | 2.1:-33233208 | None:intergenic |
| TAAAGAAGCTCCTCATCAGT+TGG | 0.517483 | 2.1:+33233151 | None:intergenic |
| CATCATCACATGCAACAACT+AGG | 0.517757 | 2.1:-33231917 | MS.gene92236:CDS |
| GGTTGATCAGTGGTGGTGAT+TGG | 0.522276 | 2.1:-33231679 | MS.gene92236:CDS |
| GGAGAATTAACAGTTCCTCC+AGG | 0.530256 | 2.1:-33233187 | MS.gene92236:CDS |
| TATATCACACCAATTCCAAA+AGG | 0.530691 | 2.1:-33232345 | MS.gene92236:CDS |
| ACAACAACAAATACTAGCTC+AGG | 0.532614 | 2.1:-33231737 | MS.gene92236:CDS |
| AATGCTCTCAAAATTTGTTG+AGG | 0.538669 | 2.1:-33231763 | MS.gene92236:CDS |
| AAAGAAGCTCCTCATCAGTT+GGG | 0.540956 | 2.1:+33233152 | None:intergenic |
| AAAACCTTAGTCTTCTACAC+TGG | 0.541616 | 2.1:-33232310 | MS.gene92236:CDS |
| TACACTGGACGTGCTCCTCA+TGG | 0.542939 | 2.1:-33232295 | MS.gene92236:CDS |
| TTCCTTCCATAATTCATCCA+TGG | 0.544732 | 2.1:-33231795 | MS.gene92236:CDS |
| GACCATTTGTTGATCTCATG+TGG | 0.545405 | 2.1:+33231966 | None:intergenic |
| AAGGACAAGAAATACCCAAC+AGG | 0.548438 | 2.1:-33232430 | MS.gene92236:CDS |
| AGCAACAACAACAAGGAGAA+AGG | 0.551906 | 2.1:-33231700 | MS.gene92236:CDS |
| AGATGGATGGGTAGTATGCA+GGG | 0.553010 | 2.1:-33232059 | MS.gene92236:CDS |
| AGAGCATTCAAGGATGTCCA+TGG | 0.554757 | 2.1:+33231778 | None:intergenic |
| GAGAATTAACAGTTCCTCCA+GGG | 0.560980 | 2.1:-33233186 | MS.gene92236:CDS |
| AGCTTCTTTACTATTACTTG+AGG | 0.562735 | 2.1:-33233138 | MS.gene92236:CDS |
| AACCACATGAGATCAACAAA+TGG | 0.569176 | 2.1:-33231968 | MS.gene92236:CDS |
| TGTACCATCAAAGGTGGTGG+TGG | 0.569923 | 2.1:+33231871 | None:intergenic |
| ATTCCAAAAGGATTGGAATG+AGG | 0.575697 | 2.1:-33232333 | MS.gene92236:CDS |
| TAGATGAATTGTACCATCAA+AGG | 0.576851 | 2.1:+33231862 | None:intergenic |
| ACGTCCAGTGTAGAAGACTA+AGG | 0.581693 | 2.1:+33232306 | None:intergenic |
| TGTGTACCTTTGAGATCCCA+AGG | 0.590405 | 2.1:+33233049 | None:intergenic |
| TAGGTTCCACCCAACTGATG+AGG | 0.590857 | 2.1:-33233161 | MS.gene92236:CDS |
| CAAATAGAGCAACTACAGCT+GGG | 0.601722 | 2.1:-33232399 | MS.gene92236:CDS |
| GTCCATGGATGAATTATGGA+AGG | 0.603236 | 2.1:+33231793 | None:intergenic |
| GATCAGGGCCACAGAATGAG+TGG | 0.613670 | 2.1:-33232468 | MS.gene92236:CDS |
| AAACTACTTGCATCTCACAA+TGG | 0.619623 | 2.1:-33231644 | MS.gene92236:CDS |
| AAGAAATACCACTCATTCTG+TGG | 0.620194 | 2.1:+33232460 | None:intergenic |
| CTCATGCAGCAACAACAACA+AGG | 0.622496 | 2.1:-33231707 | MS.gene92236:CDS |
| CTTGAGCCTTGGGATCTCAA+AGG | 0.623707 | 2.1:-33233055 | MS.gene92236:intron |
| GGAGAAAGGTTGATCAGTGG+TGG | 0.631877 | 2.1:-33231686 | MS.gene92236:CDS |
| GAAGCTCCTCATCAGTTGGG+TGG | 0.635468 | 2.1:+33233155 | None:intergenic |
| AATTGTACCATCAAAGGTGG+TGG | 0.642998 | 2.1:+33231868 | None:intergenic |
| CATTATCATCATCATCAAGA+CGG | 0.647901 | 2.1:+33232242 | None:intergenic |
| TCTGTATACAGAATGATGCA+AGG | 0.648961 | 2.1:-33233214 | None:intergenic |
| GTGGTATTTCTTCAGTCACA+AGG | 0.650969 | 2.1:-33232449 | MS.gene92236:CDS |
| ATGAATTGTACCATCAAAGG+TGG | 0.652155 | 2.1:+33231865 | None:intergenic |
| GTTGGGTGGAACCTAAACCC+TGG | 0.653580 | 2.1:+33233169 | None:intergenic |
| GAATTATGGAAGGAAGTTGG+TGG | 0.671918 | 2.1:+33231803 | None:intergenic |
| CACTTGTTGCAGATAAGTGT+AGG | 0.683334 | 2.1:-33232495 | MS.gene92236:intron |
| CAAGGAGAAAGGTTGATCAG+TGG | 0.686081 | 2.1:-33231689 | MS.gene92236:CDS |
| GATTCTGGACTGAACAATTG+TGG | 0.689594 | 2.1:+33231839 | None:intergenic |
| ATAAGTGTAGGATTGGATCA+GGG | 0.691336 | 2.1:-33232483 | MS.gene92236:CDS |
| GGGTGGAACCTAAACCCTGG+AGG | 0.757480 | 2.1:+33233172 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGCAATATATTTAATAAGGT+TGG | + | chr2.1:33232056-33232075 | None:intergenic | 20.0% |
| !! | GAGAAGCAATATATTTAATA+AGG | + | chr2.1:33232060-33232079 | None:intergenic | 20.0% |
| !! | TAATGTATGAACTAATACTA+TGG | - | chr2.1:33232005-33232024 | MS.gene92236:CDS | 20.0% |
| !!! | CAATTACATATCTTTTTCAA+TGG | + | chr2.1:33232159-33232178 | None:intergenic | 20.0% |
| !!! | CTTTGTTTCATACTATATAT+AGG | - | chr2.1:33231941-33231960 | MS.gene92236:CDS | 20.0% |
| ! | TATACATGCTGAAATATGAT+TGG | - | chr2.1:33232098-33232117 | MS.gene92236:intron | 25.0% |
| ! | TGAGGTTCTTATTAATTACT+TGG | + | chr2.1:33232733-33232752 | None:intergenic | 25.0% |
| !!! | CTTTTTCAATGGTTTTATCT+CGG | + | chr2.1:33232148-33232167 | None:intergenic | 25.0% |
| AGAAAACTCAATATGTAGCA+GGG | + | chr2.1:33232248-33232267 | None:intergenic | 30.0% | |
| AGCTTCTTTACTATTACTTG+AGG | - | chr2.1:33231692-33231711 | MS.gene92236:CDS | 30.0% | |
| CATTATCATCATCATCAAGA+CGG | + | chr2.1:33232591-33232610 | None:intergenic | 30.0% | |
| CTTCTTCTTCAATTTCTTGT+TGG | + | chr2.1:33232828-33232847 | None:intergenic | 30.0% | |
| TAGAAAACTCAATATGTAGC+AGG | + | chr2.1:33232249-33232268 | None:intergenic | 30.0% | |
| TAGATGAATTGTACCATCAA+AGG | + | chr2.1:33232971-33232990 | None:intergenic | 30.0% | |
| TATATCACACCAATTCCAAA+AGG | - | chr2.1:33232485-33232504 | MS.gene92236:CDS | 30.0% | |
| TATTTGTTCTTGTTCCTGTT+GGG | + | chr2.1:33232417-33232436 | None:intergenic | 30.0% | |
| TCCTGAAAAACAAATTCATG+AGG | + | chr2.1:33232751-33232770 | None:intergenic | 30.0% | |
| TCTGATAACATCAAGATCAA+TGG | + | chr2.1:33231737-33231756 | None:intergenic | 30.0% | |
| TTGAATGTAATCACATGTGT+TGG | - | chr2.1:33232176-33232195 | MS.gene92236:intron | 30.0% | |
| ! | TTTGGAATTGGTGTGATATA+TGG | + | chr2.1:33232485-33232504 | None:intergenic | 30.0% |
| !! | AATGCTCTCAAAATTTGTTG+AGG | - | chr2.1:33233067-33233086 | MS.gene92236:CDS | 30.0% |
| !! | ACCTCATGAATTTGTTTTTC+AGG | - | chr2.1:33232747-33232766 | MS.gene92236:intron | 30.0% |
| !! | TTTGGTTCTAGAAAATGGTT+TGG | + | chr2.1:33232889-33232908 | None:intergenic | 30.0% |
| !!! | ACAAATTTTGAGAGCATTCA+AGG | + | chr2.1:33233065-33233084 | None:intergenic | 30.0% |
| !!! | GAATTTGTTTTTCAGGAAGA+TGG | - | chr2.1:33232754-33232773 | MS.gene92236:intron | 30.0% |
| !!! | GATGTTTTGGTTCTAGAAAA+TGG | + | chr2.1:33232894-33232913 | None:intergenic | 30.0% |
| AAACTACTTGCATCTCACAA+TGG | - | chr2.1:33233186-33233205 | MS.gene92236:CDS | 35.0% | |
| AACCACATGAGATCAACAAA+TGG | - | chr2.1:33232862-33232881 | MS.gene92236:intron | 35.0% | |
| AAGAAATACCACTCATTCTG+TGG | + | chr2.1:33232373-33232392 | None:intergenic | 35.0% | |
| ACAACAACAAATACTAGCTC+AGG | - | chr2.1:33233093-33233112 | MS.gene92236:CDS | 35.0% | |
| ATAAGTGTAGGATTGGATCA+GGG | - | chr2.1:33232347-33232366 | MS.gene92236:CDS | 35.0% | |
| ATGAATTGTACCATCAAAGG+TGG | + | chr2.1:33232968-33232987 | None:intergenic | 35.0% | |
| ATTCCAAAAGGATTGGAATG+AGG | - | chr2.1:33232497-33232516 | MS.gene92236:intron | 35.0% | |
| CTATTTGTTCTTGTTCCTGT+TGG | + | chr2.1:33232418-33232437 | None:intergenic | 35.0% | |
| CTTAAGATTGAAGACATGTC+TGG | + | chr2.1:33232222-33232241 | None:intergenic | 35.0% | |
| GATGAATTATGGAAGGAAGT+TGG | + | chr2.1:33233033-33233052 | None:intergenic | 35.0% | |
| GCATCTCACAATGGAATTAA+TGG | - | chr2.1:33233195-33233214 | MS.gene92236:CDS | 35.0% | |
| GCGCATAAGTAAGATATGAT+TGG | + | chr2.1:33232034-33232053 | None:intergenic | 35.0% | |
| TTCCTTCCATAATTCATCCA+TGG | - | chr2.1:33233035-33233054 | MS.gene92236:intron | 35.0% | |
| ! | AAAACCTTAGTCTTCTACAC+TGG | - | chr2.1:33232520-33232539 | MS.gene92236:intron | 35.0% |
| ! | TGATGATAATGCAGAAGTTC+AGG | - | chr2.1:33232600-33232619 | MS.gene92236:intron | 35.0% |
| ! | TTTCCTCATTCCAATCCTTT+TGG | + | chr2.1:33232503-33232522 | None:intergenic | 35.0% |
| !! | TGCATGTGATGATGATGTTT+TGG | + | chr2.1:33232907-33232926 | None:intergenic | 35.0% |
| !!! | CACATGTGTTGGTTTTATCT+CGG | - | chr2.1:33232187-33232206 | MS.gene92236:intron | 35.0% |
| !!! | CATTCCAATCCTTTTGGAAT+TGG | + | chr2.1:33232497-33232516 | None:intergenic | 35.0% |
| !!! | TGTTTTTCAGGAAGATGGAT+GGG | - | chr2.1:33232759-33232778 | MS.gene92236:intron | 35.0% |
| !!! | TTGTTTTTCAGGAAGATGGA+TGG | - | chr2.1:33232758-33232777 | MS.gene92236:intron | 35.0% |
| AAAGAAGCTCCTCATCAGTT+GGG | + | chr2.1:33231681-33231700 | None:intergenic | 40.0% | |
| AAGGACAAGAAATACCCAAC+AGG | - | chr2.1:33232400-33232419 | MS.gene92236:CDS | 40.0% | |
| AATTGTACCATCAAAGGTGG+TGG | + | chr2.1:33232965-33232984 | None:intergenic | 40.0% | |
| ACAAATAGAGCAACTACAGC+TGG | - | chr2.1:33232430-33232449 | MS.gene92236:CDS | 40.0% | |
| AGCAACAACAACAAGGAGAA+AGG | - | chr2.1:33233130-33233149 | MS.gene92236:CDS | 40.0% | |
| CAAATAGAGCAACTACAGCT+GGG | - | chr2.1:33232431-33232450 | MS.gene92236:CDS | 40.0% | |
| CACACCAATTCCAAAAGGAT+TGG | - | chr2.1:33232490-33232509 | MS.gene92236:intron | 40.0% | |
| CATCATCACATGCAACAACT+AGG | - | chr2.1:33232913-33232932 | MS.gene92236:intron | 40.0% | |
| CTCATGGTCACAAAACTGAT+TGG | - | chr2.1:33232551-33232570 | MS.gene92236:intron | 40.0% | |
| GAATTATGGAAGGAAGTTGG+TGG | + | chr2.1:33233030-33233049 | None:intergenic | 40.0% | |
| GAGAATTAACAGTTCCTCCA+GGG | - | chr2.1:33231644-33231663 | MS.gene92236:CDS | 40.0% | |
| GATAAGTGTAGGATTGGATC+AGG | - | chr2.1:33232346-33232365 | MS.gene92236:CDS | 40.0% | |
| GATTCTGGACTGAACAATTG+TGG | + | chr2.1:33232994-33233013 | None:intergenic | 40.0% | |
| GGATGTCCATGGATGAATTA+TGG | + | chr2.1:33233044-33233063 | None:intergenic | 40.0% | |
| GTCCATGGATGAATTATGGA+AGG | + | chr2.1:33233040-33233059 | None:intergenic | 40.0% | |
| GTGGTATTTCTTCAGTCACA+AGG | - | chr2.1:33232381-33232400 | MS.gene92236:CDS | 40.0% | |
| GTTGCAGATAAGTGTAGGAT+TGG | - | chr2.1:33232340-33232359 | MS.gene92236:CDS | 40.0% | |
| TAAAGAAGCTCCTCATCAGT+TGG | + | chr2.1:33231682-33231701 | None:intergenic | 40.0% | |
| ! | CACTTGTTGCAGATAAGTGT+AGG | - | chr2.1:33232335-33232354 | MS.gene92236:CDS | 40.0% |
| ! | CCACTTAAAGACTAGCTAGT+TGG | - | chr2.1:33231860-33231879 | MS.gene92236:CDS | 40.0% |
| ! | GACCATTTGTTGATCTCATG+TGG | + | chr2.1:33232867-33232886 | None:intergenic | 40.0% |
| !! | CAATCAGTTTTGTGACCATG+AGG | + | chr2.1:33232553-33232572 | None:intergenic | 40.0% |
| !! | CCAACTAGCTAGTCTTTAAG+TGG | + | chr2.1:33231863-33231882 | None:intergenic | 40.0% |
| !!! | TGTTGGTTTTATCTCGGTGT+CGG | - | chr2.1:33232193-33232212 | MS.gene92236:intron | 40.0% |
| AAGATGGATGGGTAGTATGC+AGG | - | chr2.1:33232770-33232789 | MS.gene92236:intron | 45.0% | |
| ACGTCCAGTGTAGAAGACTA+AGG | + | chr2.1:33232527-33232546 | None:intergenic | 45.0% | |
| AGATGGATGGGTAGTATGCA+GGG | - | chr2.1:33232771-33232790 | MS.gene92236:intron | 45.0% | |
| ATCTCAACAGACTTGAGCCT+TGG | - | chr2.1:33231764-33231783 | MS.gene92236:CDS | 45.0% | |
| CTCATGCAGCAACAACAACA+AGG | - | chr2.1:33233123-33233142 | MS.gene92236:CDS | 45.0% | |
| GGAGAATTAACAGTTCCTCC+AGG | - | chr2.1:33231643-33231662 | MS.gene92236:CDS | 45.0% | |
| TAACAGTTCCTCCAGGGTTT+AGG | - | chr2.1:33231650-33231669 | MS.gene92236:CDS | 45.0% | |
| TCTCAACAGACTTGAGCCTT+GGG | - | chr2.1:33231765-33231784 | MS.gene92236:CDS | 45.0% | |
| ! | AGAGCATTCAAGGATGTCCA+TGG | + | chr2.1:33233055-33233074 | None:intergenic | 45.0% |
| ! | CAAGGAGAAAGGTTGATCAG+TGG | - | chr2.1:33233141-33233160 | MS.gene92236:CDS | 45.0% |
| ! | TGGTGGTGATTGGTCATTCT+TGG | - | chr2.1:33233161-33233180 | MS.gene92236:CDS | 45.0% |
| !! | TGTGTACCTTTGAGATCCCA+AGG | + | chr2.1:33231784-33231803 | None:intergenic | 45.0% |
| AACACCACCACCACCTTTGA+TGG | - | chr2.1:33232955-33232974 | MS.gene92236:intron | 50.0% | |
| CATGCACTACAAGTGTGTGC+AGG | + | chr2.1:33232639-33232658 | None:intergenic | 50.0% | |
| CTTGAGCCTTGGGATCTCAA+AGG | - | chr2.1:33231775-33231794 | MS.gene92236:CDS | 50.0% | |
| TAGGTTCCACCCAACTGATG+AGG | - | chr2.1:33231669-33231688 | MS.gene92236:CDS | 50.0% | |
| ! | GAGCAACTACAGCTGGGTTT+TGG | - | chr2.1:33232437-33232456 | MS.gene92236:CDS | 50.0% |
| ! | GGAGAAAGGTTGATCAGTGG+TGG | - | chr2.1:33233144-33233163 | MS.gene92236:CDS | 50.0% |
| ! | GGTTGATCAGTGGTGGTGAT+TGG | - | chr2.1:33233151-33233170 | MS.gene92236:CDS | 50.0% |
| ! | TGTACCATCAAAGGTGGTGG+TGG | + | chr2.1:33232962-33232981 | None:intergenic | 50.0% |
| !!! | GCTGGGTTTTGGAAAGCAAC+AGG | - | chr2.1:33232448-33232467 | MS.gene92236:CDS | 50.0% |
| GAAGCTCCTCATCAGTTGGG+TGG | + | chr2.1:33231678-33231697 | None:intergenic | 55.0% | |
| GATCAGGGCCACAGAATGAG+TGG | - | chr2.1:33232362-33232381 | MS.gene92236:CDS | 55.0% | |
| GTTGGGTGGAACCTAAACCC+TGG | + | chr2.1:33231664-33231683 | None:intergenic | 55.0% | |
| TACACTGGACGTGCTCCTCA+TGG | - | chr2.1:33232535-33232554 | MS.gene92236:intron | 55.0% | |
| ! | GGTGCAGCTATGGCTGATTC+TGG | + | chr2.1:33233009-33233028 | None:intergenic | 55.0% |
| !! | GGAAGTTGGTGGTGCAGCTA+TGG | + | chr2.1:33233019-33233038 | None:intergenic | 55.0% |
| GGGTGGAACCTAAACCCTGG+AGG | + | chr2.1:33231661-33231680 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 33231628 | 33233224 | 33231628 | ID=MS.gene92236 |
| chr2.1 | mRNA | 33231628 | 33233224 | 33231628 | ID=MS.gene92236.t1;Parent=MS.gene92236 |
| chr2.1 | exon | 33233056 | 33233224 | 33233056 | ID=MS.gene92236.t1.exon1;Parent=MS.gene92236.t1 |
| chr2.1 | CDS | 33233056 | 33233224 | 33233056 | ID=cds.MS.gene92236.t1;Parent=MS.gene92236.t1 |
| chr2.1 | exon | 33232231 | 33232505 | 33232231 | ID=MS.gene92236.t1.exon2;Parent=MS.gene92236.t1 |
| chr2.1 | CDS | 33232231 | 33232505 | 33232231 | ID=cds.MS.gene92236.t1;Parent=MS.gene92236.t1 |
| chr2.1 | exon | 33231628 | 33232083 | 33231628 | ID=MS.gene92236.t1.exon3;Parent=MS.gene92236.t1 |
| chr2.1 | CDS | 33231628 | 33232083 | 33231628 | ID=cds.MS.gene92236.t1;Parent=MS.gene92236.t1 |
| Gene Sequence |
| Protein sequence |
