AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene93154

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene93154.t1 MTR_1g029420 98.480 592 9 0 1 592 1 592 0.0 1215
MS.gene93154.t1 MTR_3g089055 70.451 599 136 7 1 592 6 570 0.0 818
MS.gene93154.t1 MTR_3g089055 70.451 599 136 7 1 592 1 565 0.0 816
MS.gene93154.t1 MTR_5g097480 55.946 370 163 0 223 592 175 544 8.28e-160 468
MS.gene93154.t1 MTR_2g082090 43.551 535 289 3 70 591 44 578 7.92e-150 444
MS.gene93154.t1 MTR_3g056110 39.892 554 277 8 48 592 36 542 1.70e-142 424
MS.gene93154.t1 MTR_5g094450 44.842 475 228 7 123 592 87 532 4.29e-137 410
MS.gene93154.t1 MTR_4g133660 42.702 459 229 6 137 591 114 542 6.27e-131 394
MS.gene93154.t1 MTR_2g026250 46.631 371 197 1 223 592 226 596 1.49e-125 382
MS.gene93154.t1 MTR_7g057230 37.988 487 260 12 123 591 194 656 8.80e-82 270
MS.gene93154.t1 MTR_7g027190 39.175 388 204 6 224 592 299 673 1.06e-80 267
MS.gene93154.t1 MTR_6g047750 39.130 391 196 10 223 592 293 662 1.18e-74 251
MS.gene93154.t1 MTR_3g065980 36.292 383 213 8 226 592 173 540 7.80e-69 233
MS.gene93154.t1 MTR_7g074650 38.525 366 210 6 228 592 441 792 2.52e-66 231
MS.gene93154.t1 MTR_4g064160 32.973 370 247 1 223 591 314 683 6.88e-64 223
MS.gene93154.t1 MTR_8g442410 34.127 378 230 7 226 592 156 525 2.59e-62 215
MS.gene93154.t1 MTR_7g062120 29.904 418 279 3 189 592 323 740 3.93e-62 219
MS.gene93154.t1 MTR_4g104020 32.461 382 236 5 224 592 148 520 1.30e-60 210
MS.gene93154.t1 MTR_4g064200 33.333 369 241 4 225 591 284 649 2.64e-60 212
MS.gene93154.t1 MTR_4g097080 30.952 378 248 6 223 592 131 503 9.93e-59 204
MS.gene93154.t1 MTR_3g022830 29.257 417 239 4 226 592 26 436 1.12e-57 200
MS.gene93154.t1 MTR_4g064180 30.357 392 268 3 203 589 232 623 2.74e-56 201
MS.gene93154.t1 MTR_4g064120 29.337 392 272 3 203 589 232 623 1.82e-55 198
MS.gene93154.t1 MTR_4g064150 28.934 394 275 3 203 591 339 732 2.56e-55 199
MS.gene93154.t1 MTR_2g097390 30.108 372 253 3 223 591 273 640 2.24e-54 196
MS.gene93154.t1 MTR_2g097310 30.108 372 253 3 223 591 270 637 2.75e-54 195
MS.gene93154.t1 MTR_2g097350 31.016 374 247 5 223 591 272 639 4.72e-54 194
MS.gene93154.t1 MTR_5g009080 28.837 430 239 7 224 592 55 478 5.05e-54 191
MS.gene93154.t1 MTR_2g097410 29.412 374 257 4 223 591 369 740 5.67e-54 196
MS.gene93154.t1 MTR_4g076020 35.310 371 206 11 228 592 87 429 7.85e-54 189
MS.gene93154.t1 MTR_4g102790 34.293 382 224 13 225 591 292 661 2.53e-53 193
MS.gene93154.t1 MTR_2g097467 28.362 409 280 4 187 591 254 653 1.45e-52 191
MS.gene93154.t1 MTR_5g015490 30.491 387 250 9 220 592 109 490 1.91e-52 187
MS.gene93154.t1 MTR_2g097473 28.922 408 280 7 187 591 253 653 1.38e-51 188
MS.gene93154.t1 MTR_2g097463 28.804 368 258 2 225 591 290 654 3.33e-50 184
MS.gene93154.t1 MTR_4g077760 31.452 372 240 7 226 592 194 555 3.00e-49 180
MS.gene93154.t1 MTR_3g072710 32.570 393 228 11 224 591 119 499 6.48e-47 172
MS.gene93154.t1 MTR_1g069725 32.275 378 221 12 225 591 109 462 7.12e-47 171
MS.gene93154.t1 MTR_2g089100 29.545 396 249 7 223 591 50 442 8.85e-47 171
MS.gene93154.t1 MTR_2g099110 28.791 455 281 11 171 592 7 451 1.95e-46 170
MS.gene93154.t1 MTR_1g096030 29.975 397 234 12 224 592 79 459 2.03e-45 167
MS.gene93154.t1 MTR_5g015950 26.506 415 257 7 223 591 33 445 2.57e-41 155
MS.gene93154.t1 MTR_3g053270 26.506 415 257 7 223 591 33 445 2.57e-41 155
MS.gene93154.t1 MTR_2g097380 29.934 304 194 3 241 543 240 525 5.25e-41 157
MS.gene93154.t1 MTR_5g058860 30.958 449 285 16 161 591 55 496 1.15e-40 155
MS.gene93154.t1 MTR_4g095500 26.699 412 258 7 223 591 57 467 8.29e-37 143
MS.gene93154.t1 MTR_2g034250 24.737 380 268 7 226 592 211 585 2.30e-31 129
MS.gene93154.t1 MTR_4g076140 32.444 225 145 2 224 447 47 265 3.52e-30 124
MS.gene93154.t1 MTR_4g076140 39.333 150 90 1 444 592 320 469 8.29e-30 123
MS.gene93154.t1 MTR_2g034280 24.934 381 263 8 226 592 204 575 1.52e-27 117
MS.gene93154.t1 MTR_2g034260 24.808 391 253 11 226 592 211 584 1.94e-27 117
MS.gene93154.t1 MTR_0092s0100 27.660 376 243 12 226 592 373 728 2.62e-25 111
MS.gene93154.t1 MTR_0092s0100 27.660 376 243 12 226 592 376 731 2.81e-25 111
MS.gene93154.t1 MTR_4g026485 26.396 394 266 12 205 592 249 624 1.19e-24 108
MS.gene93154.t1 MTR_8g093070 28.125 384 232 15 225 591 139 495 1.55e-24 107
MS.gene93154.t1 MTR_8g020840 24.938 401 255 16 220 592 166 548 1.32e-23 105
MS.gene93154.t1 MTR_7g109580 24.474 380 263 11 224 592 188 554 9.01e-22 99.8
MS.gene93154.t1 MTR_3g022580 32.716 162 103 2 431 592 28 183 2.33e-19 86.7
MS.gene93154.t1 MTR_1g086970 26.389 288 186 11 315 592 207 478 4.65e-18 87.8
MS.gene93154.t1 MTR_3g022005 39.785 93 56 0 500 592 33 125 2.94e-14 70.1
MS.gene93154.t1 MTR_4g074310 31.156 199 95 5 265 458 35 196 6.52e-13 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene93154.t1 AT1G21450 62.023 603 193 14 1 592 16 593 0.0 697
MS.gene93154.t1 AT5G48150 51.885 451 203 6 147 592 49 490 9.12e-159 464
MS.gene93154.t1 AT5G48150 51.885 451 203 6 147 592 49 490 9.12e-159 464
MS.gene93154.t1 AT5G48150 51.885 451 203 6 147 592 49 490 9.12e-159 464
MS.gene93154.t1 AT5G48150 51.885 451 203 6 147 592 49 490 9.12e-159 464
MS.gene93154.t1 AT1G50600 53.784 370 171 0 223 592 157 526 6.50e-146 432
MS.gene93154.t1 AT1G50600 53.784 370 171 0 223 592 228 597 5.18e-145 432
MS.gene93154.t1 AT1G50600 53.784 370 171 0 223 592 232 601 5.20e-145 432
MS.gene93154.t1 AT2G04890 53.514 370 165 1 223 592 51 413 4.08e-142 418
MS.gene93154.t1 AT4G17230 50.541 370 183 0 223 592 156 525 1.21e-132 398
MS.gene93154.t1 AT4G17230 50.541 370 183 0 223 592 156 525 1.21e-132 398
MS.gene93154.t1 AT5G52510 38.961 385 210 8 223 592 266 640 4.64e-79 262
MS.gene93154.t1 AT3G03450 38.032 376 210 9 226 592 184 545 1.04e-71 240
MS.gene93154.t1 AT1G66350 37.028 397 223 10 202 592 131 506 2.31e-69 233
MS.gene93154.t1 AT3G54220 38.482 369 207 8 228 591 296 649 1.49e-67 232
MS.gene93154.t1 AT1G07530 35.310 371 238 2 223 591 394 764 2.06e-67 234
MS.gene93154.t1 AT5G17490 38.133 375 209 10 224 592 159 516 1.52e-66 226
MS.gene93154.t1 AT5G59450 30.982 397 258 5 203 592 211 598 2.50e-62 217
MS.gene93154.t1 AT1G14920 35.389 373 219 9 226 592 173 529 2.57e-62 215
MS.gene93154.t1 AT2G29060 29.581 453 300 6 148 591 212 654 1.86e-59 210
MS.gene93154.t1 AT2G29060 29.581 453 300 6 148 591 249 691 3.61e-59 210
MS.gene93154.t1 AT2G01570 35.092 379 212 11 226 592 225 581 3.91e-59 207
MS.gene93154.t1 AT5G66770 35.389 373 226 8 226 592 221 584 4.63e-59 207
MS.gene93154.t1 AT5G41920 32.471 425 250 11 175 592 6 400 3.93e-56 195
MS.gene93154.t1 AT3G46600 30.189 371 257 2 223 592 2 371 6.14e-56 193
MS.gene93154.t1 AT2G37650 29.919 371 257 2 223 592 333 701 8.61e-56 201
MS.gene93154.t1 AT2G37650 29.919 371 257 2 223 592 345 713 1.02e-55 201
MS.gene93154.t1 AT3G46600 29.716 387 270 2 207 592 194 579 4.86e-55 196
MS.gene93154.t1 AT3G46600 29.716 387 270 2 207 592 162 547 8.84e-55 195
MS.gene93154.t1 AT2G29065 30.952 378 252 6 223 591 250 627 4.56e-54 194
MS.gene93154.t1 AT4G37650 29.371 429 259 12 191 592 118 529 9.79e-53 189
MS.gene93154.t1 AT1G07520 29.894 378 255 7 223 591 152 528 1.08e-51 186
MS.gene93154.t1 AT1G07520 29.894 378 255 7 223 591 152 528 1.08e-51 186
MS.gene93154.t1 AT1G07520 29.894 378 255 7 223 591 316 692 2.39e-51 188
MS.gene93154.t1 AT1G07520 29.894 378 255 7 223 591 317 693 2.41e-51 188
MS.gene93154.t1 AT3G50650 29.325 474 282 11 157 592 84 542 2.31e-49 180
MS.gene93154.t1 AT1G63100 32.565 347 214 7 225 563 277 611 1.82e-43 165
MS.gene93154.t1 AT1G63100 32.565 347 214 7 225 563 252 586 1.82e-43 165
MS.gene93154.t1 AT1G55580 27.845 413 246 9 223 592 42 445 1.17e-41 156
MS.gene93154.t1 AT4G08250 29.211 380 248 9 224 591 106 476 3.13e-40 153
MS.gene93154.t1 AT3G49950 26.410 390 256 11 223 591 28 407 5.49e-36 140
MS.gene93154.t1 AT1G50420 35.714 210 126 2 224 430 56 259 1.25e-33 134
MS.gene93154.t1 AT1G50420 38.411 151 90 2 444 592 330 479 5.46e-27 115
MS.gene93154.t1 AT3G13840 26.425 386 253 11 220 592 143 510 6.04e-25 109
MS.gene93154.t1 AT2G45160 26.774 310 199 9 295 592 346 639 3.93e-20 95.1
MS.gene93154.t1 AT3G60630 25.000 348 232 10 258 592 291 622 5.15e-20 94.7
MS.gene93154.t1 AT5G67411 33.668 199 119 7 342 529 2 198 6.37e-18 82.8
MS.gene93154.t1 AT4G00150 23.989 371 246 13 230 592 212 554 6.69e-17 84.7

Find 150 sgRNAs with CRISPR-Local

Find 161 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGAAATCTGATTCAAAAT+TGG 0.173475 1.3:+15375562 None:intergenic
CAGGCAGTTGGTTTCAATTC+AGG 0.191357 1.3:-15375174 MS.gene93154:CDS
TCCACAACTGTTACAAGTTT+TGG 0.228798 1.3:+15374555 None:intergenic
TAGAAGCAAGTGTTTGTATC+AGG 0.258688 1.3:+15374883 None:intergenic
CTGATAGAACCGTCTAGTTC+TGG 0.260300 1.3:-15375719 MS.gene93154:CDS
TGCCAAGCTATACTCGTTAA+AGG 0.281634 1.3:-15375870 MS.gene93154:CDS
TGATACAAACACTTGCTTCT+AGG 0.282847 1.3:-15374881 MS.gene93154:CDS
AACAGATCGTTGCACGGATT+CGG 0.283044 1.3:+15374815 None:intergenic
GGTATGAAGTCGCCGGAAAA+TGG 0.296119 1.3:-15374338 MS.gene93154:CDS
GGAAGGACTTGCGGCTCGTT+TGG 0.307317 1.3:-15375117 MS.gene93154:CDS
ACAGATCGTTGCACGGATTC+GGG 0.312714 1.3:+15374816 None:intergenic
GCGATTGAAAATACAAGAAT+TGG 0.316595 1.3:-15375498 MS.gene93154:CDS
GCGGCTCGTTTGGCTTCATC+GGG 0.324337 1.3:-15375107 MS.gene93154:CDS
TCTTTCACATTTGTGCTCAT+TGG 0.325783 1.3:+15374279 None:intergenic
AGCTAATTCAGGAGGTTCTA+TGG 0.328878 1.3:-15375645 MS.gene93154:CDS
TGATATTTCTTTGGTGCTAC+TGG 0.337052 1.3:+15375295 None:intergenic
CACAGCAGAGTAGTAATTAT+AGG 0.347958 1.3:+15374482 None:intergenic
TGCGGCTCGTTTGGCTTCAT+CGG 0.352118 1.3:-15375108 MS.gene93154:CDS
TTATAGGCTTCAACAAATCT+TGG 0.356310 1.3:+15374498 None:intergenic
CCGTCTAGTTCTGGGATATC+AGG 0.356405 1.3:-15375710 MS.gene93154:CDS
GGAAATTCTGTTCATGCTAA+TGG 0.370104 1.3:-15375689 MS.gene93154:CDS
GTACAAGATAGTAGAGGAAA+TGG 0.378806 1.3:-15374220 MS.gene93154:CDS
TTTGGATTTATTGCTGCTAA+TGG 0.383067 1.3:-15374987 MS.gene93154:CDS
TACATGCTTCTATGCTTATC+AGG 0.384672 1.3:+15375806 None:intergenic
ATGGAGGGCAAGAATGAAAA+TGG 0.387672 1.3:-15374319 MS.gene93154:CDS
CCGTCAAATTCAAAACAATC+AGG 0.398557 1.3:+15375527 None:intergenic
CACTCTTCCGAGAGAGAGCC+AGG 0.410423 1.3:-15374442 MS.gene93154:CDS
TTCAATTCAGGGAGAACCTT+CGG 0.411593 1.3:-15375162 MS.gene93154:CDS
TCAATGCTCAACTGTCGTCC+TGG 0.415417 1.3:-15374687 MS.gene93154:CDS
ACGATGAGGAAAACATGTTT+AGG 0.418481 1.3:-15375436 MS.gene93154:CDS
ACGAAACATAAGTTTCAAAC+TGG 0.420279 1.3:+15375612 None:intergenic
AAGCAATTAGAGAACTCATT+AGG 0.421160 1.3:-15374257 MS.gene93154:CDS
CTCACATAAGGTGGCTTCCC+TGG 0.421499 1.3:+15374858 None:intergenic
GGACGACAGTTGAGCATTGA+TGG 0.424496 1.3:+15374690 None:intergenic
AGGCAGTTGGTTTCAATTCA+GGG 0.425383 1.3:-15375173 MS.gene93154:CDS
ATTCATAGAGTAATTGCTTC+GGG 0.428091 1.3:+15375255 None:intergenic
TACCAGCTCAGAGCTAATTC+AGG 0.431218 1.3:-15375656 MS.gene93154:CDS
CGACTTGTTCTGAACGGGAT+TGG 0.432778 1.3:+15375370 None:intergenic
TACAAGATAGTAGAGGAAAT+GGG 0.434064 1.3:-15374219 MS.gene93154:CDS
TCAACAAATCTTGGGAGAAA+GGG 0.445090 1.3:+15374507 None:intergenic
TACCGTTGATACACTTTCAT+CGG 0.452419 1.3:+15374620 None:intergenic
TGATGCGACTTGTTCTGAAC+GGG 0.454006 1.3:+15375365 None:intergenic
ACCGTTGATACACTTTCATC+GGG 0.454201 1.3:+15374621 None:intergenic
GGGTTATATATTGACTTCCT+TGG 0.454975 1.3:+15374904 None:intergenic
TATAGGCTTCAACAAATCTT+GGG 0.456724 1.3:+15374499 None:intergenic
CAATGCTCAACTGTCGTCCT+GGG 0.461976 1.3:-15374686 MS.gene93154:CDS
TTCAACAAATCTTGGGAGAA+AGG 0.466115 1.3:+15374506 None:intergenic
TATGTCATTGATTATATCTC+CGG 0.466200 1.3:-15375918 MS.gene93154:CDS
TTTCAACATTCAACCTATCC+TGG 0.466892 1.3:+15374424 None:intergenic
TCTGAGGACAAAGATTCCTT+TGG 0.467050 1.3:+15375335 None:intergenic
TGATAGAACCGTCTAGTTCT+GGG 0.467216 1.3:-15375718 MS.gene93154:CDS
GAGTTGGCTGATGCGTCGTA+TGG 0.473339 1.3:-15375896 MS.gene93154:CDS
AAGGGAGCCGATGTTACTCC+TGG 0.478565 1.3:-15375851 MS.gene93154:CDS
CATTCATAGAGTAATTGCTT+CGG 0.479741 1.3:+15375254 None:intergenic
GCTTATCAGGAGCAAAATCA+TGG 0.483645 1.3:+15375819 None:intergenic
TCTTAACCATGCGGAGAAGC+TGG 0.488691 1.3:+15374586 None:intergenic
GTTGGAGGCCTAAGTATCAT+AGG 0.491231 1.3:-15374795 MS.gene93154:CDS
CAGCTATGATCGATGATCTC+AGG 0.491997 1.3:-15375193 MS.gene93154:CDS
GCCAAGCTATACTCGTTAAA+GGG 0.492765 1.3:-15375869 MS.gene93154:CDS
AAATCATGGGAGGACAAGCC+AGG 0.492989 1.3:+15375833 None:intergenic
TGAAAATACAAGAATTGGAG+AGG 0.493157 1.3:-15375493 MS.gene93154:CDS
GTCTTTGACCTATGATACTT+AGG 0.498050 1.3:+15374787 None:intergenic
TTGGCAGACTCAGCAAAGTC+AGG 0.500152 1.3:+15375389 None:intergenic
ATTGATTATATCTCCGGAGT+TGG 0.504145 1.3:-15375912 MS.gene93154:CDS
TGTCATTGCGTGTGAGGGCG+AGG 0.504713 1.3:-15374373 MS.gene93154:CDS
CCACCTTATGTGAGATTGAC+CGG 0.507424 1.3:-15374849 MS.gene93154:CDS
CAAACACTTGCTTCTAGGCC+AGG 0.511442 1.3:-15374876 MS.gene93154:CDS
TCCCTTTAACGAGTATAGCT+TGG 0.513672 1.3:+15375868 None:intergenic
ACAAGATAGTAGAGGAAATG+GGG 0.518024 1.3:-15374218 MS.gene93154:CDS
AACCTATCCTGGCTCTCTCT+CGG 0.522464 1.3:+15374435 None:intergenic
TCCAAAACTTGTAACAGTTG+TGG 0.523299 1.3:-15374556 MS.gene93154:CDS
CATCGGGCATGTGATGAAGC+TGG 0.525795 1.3:+15374637 None:intergenic
GGATAGAATTGCAGCCTACA+TGG 0.528367 1.3:-15375141 MS.gene93154:CDS
ACACCGGTCAATCTCACATA+AGG 0.532296 1.3:+15374846 None:intergenic
AAACTTATGTTTCGTCTACA+AGG 0.534213 1.3:-15375604 MS.gene93154:CDS
TCGTCCTGGGGAAGCTCTTG+TGG 0.536714 1.3:-15374673 MS.gene93154:CDS
TTATAAAGCTTTGAAATGCA+AGG 0.539721 1.3:-15375075 MS.gene93154:CDS
GGCTATTAAAGATGATAAGA+AGG 0.541700 1.3:-15374952 MS.gene93154:CDS
AAATATCACAAAACTTTCCT+CGG 0.543588 1.3:-15375280 MS.gene93154:CDS
GCTACGGCACGAAATTCAAA+TGG 0.544112 1.3:+15374735 None:intergenic
GAATCCGTGCAACGATCTGT+TGG 0.549569 1.3:-15374813 MS.gene93154:CDS
AGCAATGCAGATACTATTCG+AGG 0.550536 1.3:-15375027 MS.gene93154:CDS
AGGGCAAGAATGAAAATGGC+TGG 0.552064 1.3:-15374315 MS.gene93154:CDS
GTTCCTCTGTAGGTGAATCA+AGG 0.552374 1.3:+15375741 None:intergenic
AGAAGCAAGTGTTTGTATCA+GGG 0.558440 1.3:+15374884 None:intergenic
GAATGTTGAAAGGCAATGCT+TGG 0.559198 1.3:-15374412 MS.gene93154:CDS
CTCCTGAATTAGCTCTGAGC+TGG 0.562844 1.3:+15375654 None:intergenic
GATCGATGATCTCAGGCAGT+TGG 0.564311 1.3:-15375186 MS.gene93154:CDS
AGTTGGCTGATGCGTCGTAT+GGG 0.565392 1.3:-15375895 MS.gene93154:CDS
AATTTCGTGCCGTAGCATCA+AGG 0.565456 1.3:-15374728 MS.gene93154:CDS
ACTTGATTGTTGCTTCAGCA+TGG 0.566287 1.3:-15374167 MS.gene93154:CDS
GAATTGGAGAGGGCATTGCT+TGG 0.568349 1.3:-15375482 MS.gene93154:CDS
AATTGAAGACCTTGATGCTA+CGG 0.573876 1.3:+15374719 None:intergenic
TCCGTGCAACGATCTGTTGG+AGG 0.575063 1.3:-15374810 MS.gene93154:CDS
GTTTAGGACTGTGCAGAGCA+TGG 0.579400 1.3:-15375420 MS.gene93154:CDS
CGTCAAATTCAAAACAATCA+GGG 0.581488 1.3:+15375528 None:intergenic
CAACAAATCTTGGGAGAAAG+GGG 0.584291 1.3:+15374508 None:intergenic
GAAAAGCTAGCAGAAGTACT+CGG 0.588604 1.3:-15374762 MS.gene93154:CDS
AGTAATTGCTTCGGGGTCCG+AGG 0.588857 1.3:+15375263 None:intergenic
ATGAAGTCGCCGGAAAATGG+AGG 0.589202 1.3:-15374335 MS.gene93154:CDS
CTGGCTCTCTCTCGGAAGAG+TGG 0.590772 1.3:+15374443 None:intergenic
GTCAATGTCATTGCGTGTGA+GGG 0.592691 1.3:-15374378 MS.gene93154:CDS
GCCTCCAACAGATCGTTGCA+CGG 0.595803 1.3:+15374809 None:intergenic
GCCCGATGAAAGTGTATCAA+CGG 0.597244 1.3:-15374622 MS.gene93154:CDS
TAAATCCAAACTTAAAACAT+GGG 0.600368 1.3:+15375000 None:intergenic
CAAGATAGTAGAGGAAATGG+GGG 0.603750 1.3:-15374217 MS.gene93154:CDS
ATAAATCCAAACTTAAAACA+TGG 0.605905 1.3:+15374999 None:intergenic
ACGAGACCAGCTTCTCCGCA+TGG 0.606476 1.3:-15374592 MS.gene93154:CDS
GGTTCTATCAGTTCCTCTGT+AGG 0.608223 1.3:+15375731 None:intergenic
TTGAAAGGCAATGCTTGGCG+AGG 0.610581 1.3:-15374407 MS.gene93154:CDS
AGGATAGGTTGAATGTTGAA+AGG 0.611055 1.3:-15374422 MS.gene93154:CDS
CCTGATATCCCAGAACTAGA+CGG 0.611349 1.3:+15375710 None:intergenic
TGTGCTAGCGCACTTTCAGA+AGG 0.613130 1.3:-15375233 MS.gene93154:CDS
CTTCCTTGATTCACCTACAG+AGG 0.616392 1.3:-15375744 MS.gene93154:CDS
AAACACTTGCTTCTAGGCCA+GGG 0.617893 1.3:-15374875 MS.gene93154:CDS
ATAGAACGGTATGAAGTCGC+CGG 0.620697 1.3:-15374345 MS.gene93154:CDS
ATGATGCGACTTGTTCTGAA+CGG 0.622317 1.3:+15375364 None:intergenic
GCTACTAAGATTTGAATCTG+AGG 0.622598 1.3:+15375319 None:intergenic
TAGGCTGCAATTCTATCCGA+AGG 0.623160 1.3:+15375146 None:intergenic
GTCGCATCATGACTCGCCAA+AGG 0.623457 1.3:-15375351 MS.gene93154:CDS
GAAAATACAAGAATTGGAGA+GGG 0.625619 1.3:-15375492 MS.gene93154:CDS
CCGGTCAATCTCACATAAGG+TGG 0.626350 1.3:+15374849 None:intergenic
ATTGCAGCCTACATGGTGGA+AGG 0.627921 1.3:-15375134 MS.gene93154:CDS
TGAAAGGCAATGCTTGGCGA+GGG 0.630756 1.3:-15374406 MS.gene93154:CDS
TACGACGCATCAGCCAACTC+CGG 0.632209 1.3:+15375899 None:intergenic
TGTCAATGTCATTGCGTGTG+AGG 0.632541 1.3:-15374379 MS.gene93154:CDS
TTCCGAGAGAGAGCCAGGAT+AGG 0.634206 1.3:-15374437 MS.gene93154:CDS
CTTATCAGGAGCAAAATCAT+GGG 0.634286 1.3:+15375820 None:intergenic
GCTGCTAGACGATCAGAAGA+CGG 0.639186 1.3:+15375047 None:intergenic
CTACATGGTGGAAGGACTTG+CGG 0.640770 1.3:-15375126 MS.gene93154:CDS
TGAAGTCGCCGGAAAATGGA+GGG 0.642024 1.3:-15374334 MS.gene93154:CDS
CGCAAGTCCTTCCACCATGT+AGG 0.643612 1.3:+15375127 None:intergenic
TTCACCACAAGAGCTTCCCC+AGG 0.649107 1.3:+15374669 None:intergenic
AATGCTCAACTGTCGTCCTG+GGG 0.655313 1.3:-15374685 MS.gene93154:CDS
GGACAAGCCAGGAGTAACAT+CGG 0.657280 1.3:+15375844 None:intergenic
TGCTAATGGTGCTATCTCTG+AGG 0.658374 1.3:-15374973 MS.gene93154:CDS
AACAAATCTTGGGAGAAAGG+GGG 0.658411 1.3:+15374509 None:intergenic
ATCAGGAGCAAAATCATGGG+AGG 0.665372 1.3:+15375823 None:intergenic
CAGCTCAGAGCTAATTCAGG+AGG 0.666948 1.3:-15375653 MS.gene93154:CDS
TTCATAGAGTAATTGCTTCG+GGG 0.668763 1.3:+15375256 None:intergenic
GATTAAGGCTCTTAACCATG+CGG 0.671983 1.3:+15374577 None:intergenic
CGGCTCGTTTGGCTTCATCG+GGG 0.673846 1.3:-15375106 MS.gene93154:CDS
TGATGAGTGTGATGACGATG+AGG 0.676899 1.3:-15375450 MS.gene93154:CDS
GAGATCATCGATCATAGCTG+AGG 0.677523 1.3:+15375196 None:intergenic
TGACAAGTACAAGATAGTAG+AGG 0.679823 1.3:-15374226 MS.gene93154:CDS
TAGAATTGCAGCCTACATGG+TGG 0.682524 1.3:-15375138 MS.gene93154:CDS
AGGGCGAGGATAGAATAGAA+CGG 0.705742 1.3:-15374359 MS.gene93154:CDS
AAGATAGTAGAGGAAATGGG+GGG 0.714830 1.3:-15374216 MS.gene93154:CDS
GGATTCGGGATCATCAACAC+CGG 0.740769 1.3:+15374830 None:intergenic
GCTAGACGATCAGAAGACGG+AGG 0.750067 1.3:+15375050 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATCCAAACTTAAAACA+TGG + chr1.3:15375082-15375101 None:intergenic 20.0%
!! TAAATCCAAACTTAAAACAT+GGG + chr1.3:15375081-15375100 None:intergenic 20.0%
!!! AAAGTTTTGTGATATTTCTT+TGG + chr1.3:15374795-15374814 None:intergenic 20.0%
! AAATATCACAAAACTTTCCT+CGG - chr1.3:15374798-15374817 MS.gene93154:CDS 25.0%
! CAAGAAATCTGATTCAAAAT+TGG + chr1.3:15374519-15374538 None:intergenic 25.0%
!! CAATTTTGAATCAGATTTCT+TGG - chr1.3:15374517-15374536 MS.gene93154:CDS 25.0%
!!! ATAGATTTTGATATCAACCA+AGG - chr1.3:15375157-15375176 MS.gene93154:CDS 25.0%
!!! TTATAAAGCTTTGAAATGCA+AGG - chr1.3:15375003-15375022 MS.gene93154:CDS 25.0%
AAACTTATGTTTCGTCTACA+AGG - chr1.3:15374474-15374493 MS.gene93154:CDS 30.0%
AAGCAATTAGAGAACTCATT+AGG - chr1.3:15375821-15375840 MS.gene93154:CDS 30.0%
ACGAAACATAAGTTTCAAAC+TGG + chr1.3:15374469-15374488 None:intergenic 30.0%
ATTCATAGAGTAATTGCTTC+GGG + chr1.3:15374826-15374845 None:intergenic 30.0%
CATTCATAGAGTAATTGCTT+CGG + chr1.3:15374827-15374846 None:intergenic 30.0%
CGTCAAATTCAAAACAATCA+GGG + chr1.3:15374553-15374572 None:intergenic 30.0%
GAAAATACAAGAATTGGAGA+GGG - chr1.3:15374586-15374605 MS.gene93154:CDS 30.0%
GCGATTGAAAATACAAGAAT+TGG - chr1.3:15374580-15374599 MS.gene93154:CDS 30.0%
GGCTATTAAAGATGATAAGA+AGG - chr1.3:15375126-15375145 MS.gene93154:CDS 30.0%
TACAAGATAGTAGAGGAAAT+GGG - chr1.3:15375859-15375878 MS.gene93154:CDS 30.0%
TATAGGCTTCAACAAATCTT+GGG + chr1.3:15375582-15375601 None:intergenic 30.0%
TGAAAATACAAGAATTGGAG+AGG - chr1.3:15374585-15374604 MS.gene93154:CDS 30.0%
TTATAGGCTTCAACAAATCT+TGG + chr1.3:15375583-15375602 None:intergenic 30.0%
TTTGGATTTATTGCTGCTAA+TGG - chr1.3:15375091-15375110 MS.gene93154:CDS 30.0%
!!! CCTGATTGTTTTGAATTTGA+CGG - chr1.3:15374551-15374570 MS.gene93154:CDS 30.0%
!!! CTGTTACAAGTTTTGGATTA+AGG + chr1.3:15375519-15375538 None:intergenic 30.0%
AATTGAAGACCTTGATGCTA+CGG + chr1.3:15375362-15375381 None:intergenic 35.0%
ACAAGATAGTAGAGGAAATG+GGG - chr1.3:15375860-15375879 MS.gene93154:CDS 35.0%
ACGATGAGGAAAACATGTTT+AGG - chr1.3:15374642-15374661 MS.gene93154:CDS 35.0%
AGAAGCAAGTGTTTGTATCA+GGG + chr1.3:15375197-15375216 None:intergenic 35.0%
ATTGATTATATCTCCGGAGT+TGG - chr1.3:15374166-15374185 MS.gene93154:CDS 35.0%
CACAGCAGAGTAGTAATTAT+AGG + chr1.3:15375599-15375618 None:intergenic 35.0%
CCGTCAAATTCAAAACAATC+AGG + chr1.3:15374554-15374573 None:intergenic 35.0%
CTTATCAGGAGCAAAATCAT+GGG + chr1.3:15374261-15374280 None:intergenic 35.0%
GCTACTAAGATTTGAATCTG+AGG + chr1.3:15374762-15374781 None:intergenic 35.0%
GGAAATTCTGTTCATGCTAA+TGG - chr1.3:15374389-15374408 MS.gene93154:CDS 35.0%
GTACAAGATAGTAGAGGAAA+TGG - chr1.3:15375858-15375877 MS.gene93154:CDS 35.0%
GTCTTTGACCTATGATACTT+AGG + chr1.3:15375294-15375313 None:intergenic 35.0%
TACATGCTTCTATGCTTATC+AGG + chr1.3:15374275-15374294 None:intergenic 35.0%
TACCGTTGATACACTTTCAT+CGG + chr1.3:15375461-15375480 None:intergenic 35.0%
TAGAAGCAAGTGTTTGTATC+AGG + chr1.3:15375198-15375217 None:intergenic 35.0%
TCAACAAATCTTGGGAGAAA+GGG + chr1.3:15375574-15375593 None:intergenic 35.0%
TCCAAAACTTGTAACAGTTG+TGG - chr1.3:15375522-15375541 MS.gene93154:CDS 35.0%
TCTTTCACATTTGTGCTCAT+TGG + chr1.3:15375802-15375821 None:intergenic 35.0%
TGACAAGTACAAGATAGTAG+AGG - chr1.3:15375852-15375871 MS.gene93154:CDS 35.0%
TGATACAAACACTTGCTTCT+AGG - chr1.3:15375197-15375216 MS.gene93154:CDS 35.0%
TTCAACAAATCTTGGGAGAA+AGG + chr1.3:15375575-15375594 None:intergenic 35.0%
TTCATAGAGTAATTGCTTCG+GGG + chr1.3:15374825-15374844 None:intergenic 35.0%
TTTCAACATTCAACCTATCC+TGG + chr1.3:15375657-15375676 None:intergenic 35.0%
! AGGATAGGTTGAATGTTGAA+AGG - chr1.3:15375656-15375675 MS.gene93154:CDS 35.0%
! TCCACAACTGTTACAAGTTT+TGG + chr1.3:15375526-15375545 None:intergenic 35.0%
!! GGGTTATATATTGACTTCCT+TGG + chr1.3:15375177-15375196 None:intergenic 35.0%
!! TGATATTTCTTTGGTGCTAC+TGG + chr1.3:15374786-15374805 None:intergenic 35.0%
AACAAATCTTGGGAGAAAGG+GGG + chr1.3:15375572-15375591 None:intergenic 40.0%
AAGATAGTAGAGGAAATGGG+GGG - chr1.3:15375862-15375881 MS.gene93154:CDS 40.0%
ACCGTTGATACACTTTCATC+GGG + chr1.3:15375460-15375479 None:intergenic 40.0%
AGCAATGCAGATACTATTCG+AGG - chr1.3:15375051-15375070 MS.gene93154:CDS 40.0%
AGCTAATTCAGGAGGTTCTA+TGG - chr1.3:15374433-15374452 MS.gene93154:CDS 40.0%
ATGGAGGGCAAGAATGAAAA+TGG - chr1.3:15375759-15375778 MS.gene93154:CDS 40.0%
CAACAAATCTTGGGAGAAAG+GGG + chr1.3:15375573-15375592 None:intergenic 40.0%
CAAGATAGTAGAGGAAATGG+GGG - chr1.3:15375861-15375880 MS.gene93154:CDS 40.0%
GAATGTTGAAAGGCAATGCT+TGG - chr1.3:15375666-15375685 MS.gene93154:CDS 40.0%
GATTAAGGCTCTTAACCATG+CGG + chr1.3:15375504-15375523 None:intergenic 40.0%
GCCAAGCTATACTCGTTAAA+GGG - chr1.3:15374209-15374228 MS.gene93154:CDS 40.0%
GCTTATCAGGAGCAAAATCA+TGG + chr1.3:15374262-15374281 None:intergenic 40.0%
TCCCTTTAACGAGTATAGCT+TGG + chr1.3:15374213-15374232 None:intergenic 40.0%
TCTGAGGACAAAGATTCCTT+TGG + chr1.3:15374746-15374765 None:intergenic 40.0%
TGCCAAGCTATACTCGTTAA+AGG - chr1.3:15374208-15374227 MS.gene93154:CDS 40.0%
TTCAATTCAGGGAGAACCTT+CGG - chr1.3:15374916-15374935 MS.gene93154:CDS 40.0%
! AAATGGGGGGACTTCATTTT+GGG - chr1.3:15375875-15375894 MS.gene93154:CDS 40.0%
! ACTTGATTGTTGCTTCAGCA+TGG - chr1.3:15375911-15375930 MS.gene93154:CDS 40.0%
! AGGCAGTTGGTTTCAATTCA+GGG - chr1.3:15374905-15374924 MS.gene93154:CDS 40.0%
! ATGATGCGACTTGTTCTGAA+CGG + chr1.3:15374717-15374736 None:intergenic 40.0%
!! GAAAAGCTAGCAGAAGTACT+CGG - chr1.3:15375316-15375335 MS.gene93154:CDS 40.0%
!! TGATAGAACCGTCTAGTTCT+GGG - chr1.3:15374360-15374379 MS.gene93154:CDS 40.0%
!!! GTGTGCCCATGTTTTAAGTT+TGG - chr1.3:15375073-15375092 MS.gene93154:CDS 40.0%
AAACACTTGCTTCTAGGCCA+GGG - chr1.3:15375203-15375222 MS.gene93154:CDS 45.0%
AACAGATCGTTGCACGGATT+CGG + chr1.3:15375266-15375285 None:intergenic 45.0%
AATTTCGTGCCGTAGCATCA+AGG - chr1.3:15375350-15375369 MS.gene93154:CDS 45.0%
ACACCGGTCAATCTCACATA+AGG + chr1.3:15375235-15375254 None:intergenic 45.0%
AGGGCAAGAATGAAAATGGC+TGG - chr1.3:15375763-15375782 MS.gene93154:CDS 45.0%
AGGGCGAGGATAGAATAGAA+CGG - chr1.3:15375719-15375738 MS.gene93154:CDS 45.0%
ATAGAACGGTATGAAGTCGC+CGG - chr1.3:15375733-15375752 MS.gene93154:CDS 45.0%
ATCAGGAGCAAAATCATGGG+AGG + chr1.3:15374258-15374277 None:intergenic 45.0%
CAGCTATGATCGATGATCTC+AGG - chr1.3:15374885-15374904 MS.gene93154:CDS 45.0%
CCACCTTATGTGAGATTGAC+CGG - chr1.3:15375229-15375248 MS.gene93154:CDS 45.0%
CCTGATATCCCAGAACTAGA+CGG + chr1.3:15374371-15374390 None:intergenic 45.0%
CTTCCTTGATTCACCTACAG+AGG - chr1.3:15374334-15374353 MS.gene93154:CDS 45.0%
GAGATCATCGATCATAGCTG+AGG + chr1.3:15374885-15374904 None:intergenic 45.0%
GCTACGGCACGAAATTCAAA+TGG + chr1.3:15375346-15375365 None:intergenic 45.0%
GGATAGAATTGCAGCCTACA+TGG - chr1.3:15374937-15374956 MS.gene93154:CDS 45.0%
GGTTCTATCAGTTCCTCTGT+AGG + chr1.3:15374350-15374369 None:intergenic 45.0%
GTCAATGTCATTGCGTGTGA+GGG - chr1.3:15375700-15375719 MS.gene93154:CDS 45.0%
GTTCCTCTGTAGGTGAATCA+AGG + chr1.3:15374340-15374359 None:intergenic 45.0%
GTTGGAGGCCTAAGTATCAT+AGG - chr1.3:15375283-15375302 MS.gene93154:CDS 45.0%
TACCAGCTCAGAGCTAATTC+AGG - chr1.3:15374422-15374441 MS.gene93154:CDS 45.0%
TAGAATTGCAGCCTACATGG+TGG - chr1.3:15374940-15374959 MS.gene93154:CDS 45.0%
TAGGCTGCAATTCTATCCGA+AGG + chr1.3:15374935-15374954 None:intergenic 45.0%
TGTCAATGTCATTGCGTGTG+AGG - chr1.3:15375699-15375718 MS.gene93154:CDS 45.0%
! CAGGCAGTTGGTTTCAATTC+AGG - chr1.3:15374904-15374923 MS.gene93154:CDS 45.0%
! CATTCTTGCCCTCCATTTTC+CGG + chr1.3:15375755-15375774 None:intergenic 45.0%
! CTGATAGAACCGTCTAGTTC+TGG - chr1.3:15374359-15374378 MS.gene93154:CDS 45.0%
! GAAATGGGGGGACTTCATTT+TGG - chr1.3:15375874-15375893 MS.gene93154:CDS 45.0%
! GCCCGATGAAAGTGTATCAA+CGG - chr1.3:15375456-15375475 MS.gene93154:CDS 45.0%
! TGATGAGTGTGATGACGATG+AGG - chr1.3:15374628-15374647 MS.gene93154:CDS 45.0%
! TGATGCGACTTGTTCTGAAC+GGG + chr1.3:15374716-15374735 None:intergenic 45.0%
!! TGCTAATGGTGCTATCTCTG+AGG - chr1.3:15375105-15375124 MS.gene93154:CDS 45.0%
AAATCATGGGAGGACAAGCC+AGG + chr1.3:15374248-15374267 None:intergenic 50.0%
AATGCTCAACTGTCGTCCTG+GGG - chr1.3:15375393-15375412 MS.gene93154:CDS 50.0%
ACAGATCGTTGCACGGATTC+GGG + chr1.3:15375265-15375284 None:intergenic 50.0%
AGTTGGCTGATGCGTCGTAT+GGG - chr1.3:15374183-15374202 MS.gene93154:CDS 50.0%
ATGAAGTCGCCGGAAAATGG+AGG - chr1.3:15375743-15375762 MS.gene93154:CDS 50.0%
CAAACACTTGCTTCTAGGCC+AGG - chr1.3:15375202-15375221 MS.gene93154:CDS 50.0%
CAATGCTCAACTGTCGTCCT+GGG - chr1.3:15375392-15375411 MS.gene93154:CDS 50.0%
CAGCTCAGAGCTAATTCAGG+AGG - chr1.3:15374425-15374444 MS.gene93154:CDS 50.0%
CCGGTCAATCTCACATAAGG+TGG + chr1.3:15375232-15375251 None:intergenic 50.0%
GAATCCGTGCAACGATCTGT+TGG - chr1.3:15375265-15375284 MS.gene93154:CDS 50.0%
GATCGATGATCTCAGGCAGT+TGG - chr1.3:15374892-15374911 MS.gene93154:CDS 50.0%
GCTGCTAGACGATCAGAAGA+CGG + chr1.3:15375034-15375053 None:intergenic 50.0%
GGACAAGCCAGGAGTAACAT+CGG + chr1.3:15374237-15374256 None:intergenic 50.0%
GGATTCGGGATCATCAACAC+CGG + chr1.3:15375251-15375270 None:intergenic 50.0%
GGTATGAAGTCGCCGGAAAA+TGG - chr1.3:15375740-15375759 MS.gene93154:CDS 50.0%
TCAATGCTCAACTGTCGTCC+TGG - chr1.3:15375391-15375410 MS.gene93154:CDS 50.0%
TCTTAACCATGCGGAGAAGC+TGG + chr1.3:15375495-15375514 None:intergenic 50.0%
TGAAAGGCAATGCTTGGCGA+GGG - chr1.3:15375672-15375691 MS.gene93154:CDS 50.0%
TGAAGTCGCCGGAAAATGGA+GGG - chr1.3:15375744-15375763 MS.gene93154:CDS 50.0%
TGTGCTAGCGCACTTTCAGA+AGG - chr1.3:15374845-15374864 MS.gene93154:CDS 50.0%
TTGAAAGGCAATGCTTGGCG+AGG - chr1.3:15375671-15375690 MS.gene93154:CDS 50.0%
TTGGCAGACTCAGCAAAGTC+AGG + chr1.3:15374692-15374711 None:intergenic 50.0%
! AACCTATCCTGGCTCTCTCT+CGG + chr1.3:15375646-15375665 None:intergenic 50.0%
! ATTGCAGCCTACATGGTGGA+AGG - chr1.3:15374944-15374963 MS.gene93154:CDS 50.0%
! CGACTTGTTCTGAACGGGAT+TGG + chr1.3:15374711-15374730 None:intergenic 50.0%
! CTACATGGTGGAAGGACTTG+CGG - chr1.3:15374952-15374971 MS.gene93154:CDS 50.0%
! GTTTAGGACTGTGCAGAGCA+TGG - chr1.3:15374658-15374677 MS.gene93154:CDS 50.0%
!! CCGTCTAGTTCTGGGATATC+AGG - chr1.3:15374368-15374387 MS.gene93154:CDS 50.0%
!! CTCCTGAATTAGCTCTGAGC+TGG + chr1.3:15374427-15374446 None:intergenic 50.0%
!! GAATTGGAGAGGGCATTGCT+TGG - chr1.3:15374596-15374615 MS.gene93154:CDS 50.0%
!! GGACGACAGTTGAGCATTGA+TGG + chr1.3:15375391-15375410 None:intergenic 50.0%
AAGGGAGCCGATGTTACTCC+TGG - chr1.3:15374227-15374246 MS.gene93154:CDS 55.0%
AGTAATTGCTTCGGGGTCCG+AGG + chr1.3:15374818-15374837 None:intergenic 55.0%
CATCGGGCATGTGATGAAGC+TGG + chr1.3:15375444-15375463 None:intergenic 55.0%
CGCAAGTCCTTCCACCATGT+AGG + chr1.3:15374954-15374973 None:intergenic 55.0%
CTCACATAAGGTGGCTTCCC+TGG + chr1.3:15375223-15375242 None:intergenic 55.0%
GAGTTGGCTGATGCGTCGTA+TGG - chr1.3:15374182-15374201 MS.gene93154:CDS 55.0%
GCCTCCAACAGATCGTTGCA+CGG + chr1.3:15375272-15375291 None:intergenic 55.0%
GCTAGACGATCAGAAGACGG+AGG + chr1.3:15375031-15375050 None:intergenic 55.0%
GTCGCATCATGACTCGCCAA+AGG - chr1.3:15374727-15374746 MS.gene93154:CDS 55.0%
TACGACGCATCAGCCAACTC+CGG + chr1.3:15374182-15374201 None:intergenic 55.0%
TCCGTGCAACGATCTGTTGG+AGG - chr1.3:15375268-15375287 MS.gene93154:CDS 55.0%
TTCACCACAAGAGCTTCCCC+AGG + chr1.3:15375412-15375431 None:intergenic 55.0%
TTCCGAGAGAGAGCCAGGAT+AGG - chr1.3:15375641-15375660 MS.gene93154:CDS 55.0%
! TGCGGCTCGTTTGGCTTCAT+CGG - chr1.3:15374970-15374989 MS.gene93154:CDS 55.0%
! TGGGAGAAAGGGGGAAGTGT+TGG + chr1.3:15375563-15375582 None:intergenic 55.0%
! TGGGGGGACTTCATTTTGGG+TGG - chr1.3:15375878-15375897 MS.gene93154:CDS 55.0%
!! GGGGGGACTTCATTTTGGGT+GGG - chr1.3:15375879-15375898 MS.gene93154:CDS 55.0%
ACGAGACCAGCTTCTCCGCA+TGG - chr1.3:15375486-15375505 MS.gene93154:CDS 60.0%
CACTCTTCCGAGAGAGAGCC+AGG - chr1.3:15375636-15375655 MS.gene93154:CDS 60.0%
GGAAGGACTTGCGGCTCGTT+TGG - chr1.3:15374961-15374980 MS.gene93154:CDS 60.0%
TCGTCCTGGGGAAGCTCTTG+TGG - chr1.3:15375405-15375424 MS.gene93154:CDS 60.0%
TGTCATTGCGTGTGAGGGCG+AGG - chr1.3:15375705-15375724 MS.gene93154:CDS 60.0%
! CGGCTCGTTTGGCTTCATCG+GGG - chr1.3:15374972-15374991 MS.gene93154:CDS 60.0%
! CTGGCTCTCTCTCGGAAGAG+TGG + chr1.3:15375638-15375657 None:intergenic 60.0%
! GCGGCTCGTTTGGCTTCATC+GGG - chr1.3:15374971-15374990 MS.gene93154:CDS 60.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 15374161 15375939 15374161 ID=MS.gene93154
chr1.3 mRNA 15374161 15375939 15374161 ID=MS.gene93154.t1;Parent=MS.gene93154
chr1.3 exon 15374161 15375939 15374161 ID=MS.gene93154.t1.exon1;Parent=MS.gene93154.t1
chr1.3 CDS 15374161 15375939 15374161 ID=cds.MS.gene93154.t1;Parent=MS.gene93154.t1
Gene Sequence

>MS.gene93154

ATGTCATTGATTATATCTCCGGAGTTGGCTGATGCGTCGTATGGGAATGCCAAGCTATACTCGTTAAAGGGAGCCGATGTTACTCCTGGCTTGTCCTCCCATGATTTTGCTCCTGATAAGCATAGAAGCATGTACATGAATGATTCTTACTCGAGTGAGAGTTACGAAAAGTACTTCCTTGATTCACCTACAGAGGAACTGATAGAACCGTCTAGTTCTGGGATATCAGGAAATTCTGTTCATGCTAATGGTGATTCTTCGTACCAGCTCAGAGCTAATTCAGGAGGTTCTATGGTTACTGATAACCAGTTTGAAACTTATGTTTCGTCTACAAGGCAGCGTGATGCATATCAGTCCAATTTTGAATCAGATTTCTTGGAAAGTGAAAGCCCTGATTGTTTTGAATTTGACGGTGATATGCGATTGAAAATACAAGAATTGGAGAGGGCATTGCTTGGTGACAATAATGATGAGTGTGATGACGATGAGGAAAACATGTTTAGGACTGTGCAGAGCATGGAGATTGATCCTGACTTTGCTGAGTCTGCCAATCCCGTTCAGAACAAGTCGCATCATGACTCGCCAAAGGAATCTTTGTCCTCAGATTCAAATCTTAGTAGCACCAGTAGCACCAAAGAAATATCACAAAACTTTCCTCGGACCCCGAAGCAATTACTCTATGAATGTGCTAGCGCACTTTCAGAAGGAAATGAAGTAAAAGCCTCAGCTATGATCGATGATCTCAGGCAGTTGGTTTCAATTCAGGGAGAACCTTCGGATAGAATTGCAGCCTACATGGTGGAAGGACTTGCGGCTCGTTTGGCTTCATCGGGGAAATGTATTTATAAAGCTTTGAAATGCAAGGAACCTCCGTCTTCTGATCGTCTAGCAGCAATGCAGATACTATTCGAGGTGTGCCCATGTTTTAAGTTTGGATTTATTGCTGCTAATGGTGCTATCTCTGAGGCTATTAAAGATGATAAGAAGGTTCACATTATAGATTTTGATATCAACCAAGGAAGTCAATATATAACCCTGATACAAACACTTGCTTCTAGGCCAGGGAAGCCACCTTATGTGAGATTGACCGGTGTTGATGATCCCGAATCCGTGCAACGATCTGTTGGAGGCCTAAGTATCATAGGTCAAAGACTTGAAAAGCTAGCAGAAGTACTCGGATTGCCATTTGAATTTCGTGCCGTAGCATCAAGGTCTTCAATTGTTACTCCATCAATGCTCAACTGTCGTCCTGGGGAAGCTCTTGTGGTGAACTTTGCATTCCAGCTTCATCACATGCCCGATGAAAGTGTATCAACGGTAAACGAACGAGACCAGCTTCTCCGCATGGTTAAGAGCCTTAATCCAAAACTTGTAACAGTTGTGGAACAAGATGTGAACACCAACACTTCCCCCTTTCTCCCAAGATTTGTTGAAGCCTATAATTACTACTCTGCTGTGTATGAGTCACTCGACGCCACTCTTCCGAGAGAGAGCCAGGATAGGTTGAATGTTGAAAGGCAATGCTTGGCGAGGGACATTGTCAATGTCATTGCGTGTGAGGGCGAGGATAGAATAGAACGGTATGAAGTCGCCGGAAAATGGAGGGCAAGAATGAAAATGGCTGGATTCACTTCATCACCAATGAGCACAAATGTGAAAGAAGCAATTAGAGAACTCATTAGGCAGTACTGTGACAAGTACAAGATAGTAGAGGAAATGGGGGGACTTCATTTTGGGTGGGAAGACAAAAACTTGATTGTTGCTTCAGCATGGAAGTGA
Protein sequence

>MS.gene93154.t1

MSLIISPELADASYGNAKLYSLKGADVTPGLSSHDFAPDKHRSMYMNDSYSSESYEKYFLDSPTEELIEPSSSGISGNSVHANGDSSYQLRANSGGSMVTDNQFETYVSSTRQRDAYQSNFESDFLESESPDCFEFDGDMRLKIQELERALLGDNNDECDDDEENMFRTVQSMEIDPDFAESANPVQNKSHHDSPKESLSSDSNLSSTSSTKEISQNFPRTPKQLLYECASALSEGNEVKASAMIDDLRQLVSIQGEPSDRIAAYMVEGLAARLASSGKCIYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFIAANGAISEAIKDDKKVHIIDFDINQGSQYITLIQTLASRPGKPPYVRLTGVDDPESVQRSVGGLSIIGQRLEKLAEVLGLPFEFRAVASRSSIVTPSMLNCRPGEALVVNFAFQLHHMPDESVSTVNERDQLLRMVKSLNPKLVTVVEQDVNTNTSPFLPRFVEAYNYYSAVYESLDATLPRESQDRLNVERQCLARDIVNVIACEGEDRIERYEVAGKWRARMKMAGFTSSPMSTNVKEAIRELIRQYCDKYKIVEEMGGLHFGWEDKNLIVASAWK