Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96967.t1 | XP_013449922.1 | 97.4 | 737 | 19 | 0 | 1 | 737 | 1 | 737 | 0.00E+00 | 1442.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96967.t1 | B5WWZ9 | 78.6 | 742 | 152 | 3 | 3 | 737 | 8 | 749 | 0.0e+00 | 1191.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96967.t1 | A0A072UDR1 | 97.4 | 737 | 19 | 0 | 1 | 737 | 1 | 737 | 0.0e+00 | 1442.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049435 | MS.gene96967 | 0.806998 | 6.26E-50 | -1.69E-46 |
| MS.gene050680 | MS.gene96967 | 0.800888 | 1.17E-48 | -1.69E-46 |
| MS.gene050750 | MS.gene96967 | 0.801856 | 7.39E-49 | -1.69E-46 |
| MS.gene050787 | MS.gene96967 | 0.807698 | 4.45E-50 | -1.69E-46 |
| MS.gene052056 | MS.gene96967 | -0.81059 | 1.07E-50 | -1.69E-46 |
| MS.gene052333 | MS.gene96967 | 0.804665 | 1.94E-49 | -1.69E-46 |
| MS.gene053054 | MS.gene96967 | -0.814445 | 1.54E-51 | -1.69E-46 |
| MS.gene054291 | MS.gene96967 | -0.810119 | 1.35E-50 | -1.69E-46 |
| MS.gene055356 | MS.gene96967 | 0.816906 | 4.34E-52 | -1.69E-46 |
| MS.gene055358 | MS.gene96967 | 0.827575 | 1.45E-54 | -1.69E-46 |
| MS.gene057200 | MS.gene96967 | 0.817165 | 3.80E-52 | -1.69E-46 |
| MS.gene060137 | MS.gene96967 | -0.815692 | 8.12E-52 | -1.69E-46 |
| MS.gene061114 | MS.gene96967 | -0.825511 | 4.50E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96967.t1 | MTR_7g097210 | 97.422 | 737 | 19 | 0 | 1 | 737 | 1 | 737 | 0.0 | 1481 |
| MS.gene96967.t1 | MTR_7g097210 | 97.707 | 567 | 13 | 0 | 171 | 737 | 1 | 567 | 0.0 | 1138 |
| MS.gene96967.t1 | MTR_4g080823 | 55.792 | 751 | 311 | 11 | 3 | 736 | 13 | 759 | 0.0 | 833 |
| MS.gene96967.t1 | MTR_4g080890 | 55.925 | 751 | 310 | 11 | 3 | 736 | 4 | 750 | 0.0 | 831 |
| MS.gene96967.t1 | MTR_0651s0010 | 54.769 | 650 | 274 | 10 | 3 | 636 | 4 | 649 | 0.0 | 699 |
| MS.gene96967.t1 | MTR_1g075650 | 54.593 | 577 | 214 | 7 | 164 | 735 | 3 | 536 | 0.0 | 646 |
| MS.gene96967.t1 | MTR_5g025650 | 42.018 | 783 | 392 | 14 | 7 | 737 | 56 | 828 | 0.0 | 564 |
| MS.gene96967.t1 | MTR_8g072210 | 43.065 | 757 | 377 | 14 | 25 | 737 | 63 | 809 | 0.0 | 545 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96967.t1 | AT4G28570 | 58.412 | 743 | 291 | 7 | 5 | 737 | 11 | 745 | 0.0 | 848 |
| MS.gene96967.t1 | AT4G28570 | 58.412 | 743 | 291 | 7 | 5 | 737 | 11 | 745 | 0.0 | 848 |
| MS.gene96967.t1 | AT3G23410 | 57.359 | 727 | 289 | 10 | 25 | 734 | 18 | 740 | 0.0 | 821 |
| MS.gene96967.t1 | AT3G23410 | 59.193 | 669 | 262 | 7 | 75 | 734 | 6 | 672 | 0.0 | 793 |
| MS.gene96967.t1 | AT1G03990 | 54.267 | 750 | 316 | 12 | 6 | 736 | 13 | 754 | 0.0 | 775 |
| MS.gene96967.t1 | AT4G19380 | 41.121 | 749 | 397 | 12 | 18 | 737 | 34 | 767 | 2.84e-175 | 521 |
| MS.gene96967.t1 | AT4G19380 | 41.486 | 740 | 389 | 12 | 27 | 737 | 1 | 725 | 2.08e-174 | 517 |
Find 171 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAGAGACTTCTTTGTTTAA+TGG | 0.132897 | 7.4:+12338649 | None:intergenic |
| TGGATTCTGTCATTCAAATT+AGG | 0.139329 | 7.4:-12337745 | MS.gene96967:CDS |
| TTGGATTAAGGAAGTCTTTA+AGG | 0.146681 | 7.4:-12335796 | MS.gene96967:CDS |
| AAGGAAGTCTTTAAGGATTT+TGG | 0.147533 | 7.4:-12335789 | MS.gene96967:CDS |
| CAAATTCTCTGAGATTTCTT+TGG | 0.197447 | 7.4:-12337668 | MS.gene96967:CDS |
| TAGTTACTTTGGATTCTATT+TGG | 0.246811 | 7.4:+12336236 | None:intergenic |
| CTCACCAATGGCGTTGCTTC+TGG | 0.251725 | 7.4:+12337778 | None:intergenic |
| AAAATCTTAGAATTGGATTA+AGG | 0.256561 | 7.4:-12335808 | MS.gene96967:CDS |
| CCATCCAGTTCAATTTGCTT+GGG | 0.271230 | 7.4:-12336128 | MS.gene96967:CDS |
| CTTGATACTGTCACGGTTGT+TGG | 0.291950 | 7.4:-12335674 | MS.gene96967:CDS |
| ATCCAATCCCTGAGTGAAAA+AGG | 0.292659 | 7.4:-12336994 | MS.gene96967:CDS |
| GGATTCTGTCATTCAAATTA+GGG | 0.293627 | 7.4:-12337744 | MS.gene96967:CDS |
| ATTATAGAAGCACCTGCTTT+AGG | 0.296752 | 7.4:-12336001 | MS.gene96967:CDS |
| TCATCCTTCTATACAACTTC+TGG | 0.300151 | 7.4:-12338613 | MS.gene96967:CDS |
| TTAATGGAATGGATGGAAAA+AGG | 0.300921 | 7.4:+12338665 | None:intergenic |
| GACAGAGAAAATCTTAGAAT+TGG | 0.302166 | 7.4:-12335815 | MS.gene96967:CDS |
| AAGTTATGATTCCTCCTTCA+TGG | 0.302332 | 7.4:+12336065 | None:intergenic |
| TTGTAGAACCGGGGATAAAA+AGG | 0.306734 | 7.4:-12336428 | MS.gene96967:CDS |
| CATTGGTGAGGTGGATTCTA+TGG | 0.309210 | 7.4:-12337765 | MS.gene96967:CDS |
| TGAAGGTTCCTTCCAATGTT+TGG | 0.313050 | 7.4:+12336154 | None:intergenic |
| AAAACAAATGGATACCTCTA+AGG | 0.315779 | 7.4:-12337609 | MS.gene96967:CDS |
| AAAGTGATCATTCTAGAAAA+AGG | 0.328591 | 7.4:-12336853 | MS.gene96967:CDS |
| TTGATACTGTCACGGTTGTT+GGG | 0.329404 | 7.4:-12335673 | MS.gene96967:CDS |
| TGCTGTTATGGTTGTAGAAC+CGG | 0.330773 | 7.4:-12336439 | MS.gene96967:CDS |
| CTTCATCTTCAGTGACTTCA+AGG | 0.331159 | 7.4:+12336971 | None:intergenic |
| TCCATCCAGTTCAATTTGCT+TGG | 0.335666 | 7.4:-12336129 | MS.gene96967:CDS |
| TTGTCTCTATTAGTCCTTCC+TGG | 0.345240 | 7.4:+12337040 | None:intergenic |
| GTGGAGGTTCAGCTATAAAC+TGG | 0.347090 | 7.4:-12336705 | MS.gene96967:CDS |
| AATCCAATGTGGAAGGCAAT+AGG | 0.357171 | 7.4:-12337111 | MS.gene96967:CDS |
| TGTCTCTAACCAATGCAAAA+AGG | 0.362568 | 7.4:+12335894 | None:intergenic |
| CATTGTCCAAAGTTCACTTC+TGG | 0.369671 | 7.4:+12335640 | None:intergenic |
| GTTTAGTTCTGCACGTCAAA+TGG | 0.376629 | 7.4:-12335618 | MS.gene96967:CDS |
| TCCTGGAGAGGCCTCTTCTT+CGG | 0.378893 | 7.4:+12337057 | None:intergenic |
| TATTGCGGTTCGTGCTGTTA+TGG | 0.381783 | 7.4:-12336451 | MS.gene96967:CDS |
| AACCTCTCAGATGCATGTAT+TGG | 0.383483 | 7.4:-12338704 | MS.gene96967:CDS |
| AACACAAACACCGCCCTTAG+AGG | 0.384539 | 7.4:+12337595 | None:intergenic |
| CTCTTTCCTTGCATTGGAAG+TGG | 0.385444 | 7.4:-12337702 | MS.gene96967:CDS |
| ACATGATGAAATAGTTACTT+TGG | 0.389119 | 7.4:+12336225 | None:intergenic |
| GGATTGGATTAATGTAGAAT+TGG | 0.391272 | 7.4:+12337008 | None:intergenic |
| GAGGGTGCAGTTGATGAGAA+TGG | 0.395238 | 7.4:-12335566 | MS.gene96967:CDS |
| CTGTTGAAGTTGGAACTTAT+AGG | 0.395958 | 7.4:-12335754 | MS.gene96967:CDS |
| GACTTCTTTGTTTAATGGAA+TGG | 0.401945 | 7.4:+12338654 | None:intergenic |
| GAGAAGAAATTCTCAAGAAA+TGG | 0.402058 | 7.4:-12337639 | MS.gene96967:CDS |
| GTGGAACTCTTTCCTTGCAT+TGG | 0.404058 | 7.4:-12337708 | MS.gene96967:CDS |
| TCCTCAGGATTATTCTTCCT+TGG | 0.407304 | 7.4:-12336818 | MS.gene96967:CDS |
| TCTTCTATACTTTGTTCTCA+AGG | 0.410412 | 7.4:-12337558 | MS.gene96967:CDS |
| TGATGAGAATGGAGAAAGTT+GGG | 0.414388 | 7.4:-12335555 | MS.gene96967:CDS |
| TTGCTGCAGACAGATGTAAA+TGG | 0.419312 | 7.4:-12337138 | MS.gene96967:intron |
| CCTCTACCTCCTCTCAATAG+AGG | 0.423304 | 7.4:+12338757 | None:intergenic |
| GCTTTCAAAATCAAGTTCTT+CGG | 0.428581 | 7.4:-12336537 | MS.gene96967:CDS |
| CTATGGACTCGGTATGTAGA+AGG | 0.430288 | 7.4:-12336591 | MS.gene96967:CDS |
| TTCTTATAGACTTGATCAAA+TGG | 0.433097 | 7.4:-12335837 | MS.gene96967:CDS |
| TCAGAGAATTTGAGAACAAA+AGG | 0.433449 | 7.4:+12337679 | None:intergenic |
| AAATGTGATGCTGTCATTGT+TGG | 0.434013 | 7.4:-12336928 | MS.gene96967:CDS |
| TTTGCATTGGTTAGAGACAT+AGG | 0.434303 | 7.4:-12335890 | MS.gene96967:CDS |
| CATTCCTTCTTAACAGAGTC+AGG | 0.435806 | 7.4:+12336664 | None:intergenic |
| TGCAACTCCTCCACCGCTAC+CGG | 0.435895 | 7.4:+12336903 | None:intergenic |
| TAAAATTGCAGAATCACTTA+AGG | 0.439016 | 7.4:-12335432 | MS.gene96967:CDS |
| ATCCAATGTGGAAGGCAATA+GGG | 0.443972 | 7.4:-12337110 | MS.gene96967:CDS |
| CGGAAAGGGTGCGAGAGAAT+CGG | 0.450150 | 7.4:-12336517 | MS.gene96967:CDS |
| AATGGTCAAAAGAAAACAAA+TGG | 0.451166 | 7.4:-12337621 | MS.gene96967:CDS |
| AAAATCAAGTTCTTCGGAAA+GGG | 0.453657 | 7.4:-12336531 | MS.gene96967:CDS |
| ATGAACGAGCTCTATGAATC+AGG | 0.454478 | 7.4:-12336784 | MS.gene96967:CDS |
| GTATTAGTTCCATGGATCTC+AGG | 0.457639 | 7.4:-12335962 | MS.gene96967:CDS |
| ACCGAAGAAGAGGCCTCTCC+AGG | 0.458071 | 7.4:-12337058 | MS.gene96967:CDS |
| TAGAGCTGAGAAATTCATAA+TGG | 0.458285 | 7.4:-12336344 | MS.gene96967:CDS |
| AGAACCAGAAGTTGTATAGA+AGG | 0.460921 | 7.4:+12338609 | None:intergenic |
| TAGCCCCAAGCAAATTGAAC+TGG | 0.461727 | 7.4:+12336124 | None:intergenic |
| AGGGATCAAAGAAGAAGAAC+TGG | 0.465360 | 7.4:-12335705 | MS.gene96967:CDS |
| CAAAATCAAGTTCTTCGGAA+AGG | 0.466408 | 7.4:-12336532 | MS.gene96967:CDS |
| GCGGCGGGAGCTGTTGAAGT+TGG | 0.467478 | 7.4:-12335764 | MS.gene96967:CDS |
| TACCCTATTGCCTTCCACAT+TGG | 0.470515 | 7.4:+12337108 | None:intergenic |
| GTTGGTTCCGGTAGCGGTGG+AGG | 0.473180 | 7.4:-12336910 | MS.gene96967:CDS |
| TTGATGAGAATGGAGAAAGT+TGG | 0.475999 | 7.4:-12335556 | MS.gene96967:CDS |
| GAGAAATTCATAATGGAAGA+TGG | 0.476544 | 7.4:-12336337 | MS.gene96967:CDS |
| ATAATGGAAGATGGAAAGAA+TGG | 0.481187 | 7.4:-12336328 | MS.gene96967:CDS |
| GTAGATTGAATGGTTACCAT+AGG | 0.483305 | 7.4:+12335473 | None:intergenic |
| CGCGGTCCAGAAGTGAACTT+TGG | 0.484300 | 7.4:-12335646 | MS.gene96967:CDS |
| GTCATTGTTGGTTCCGGTAG+CGG | 0.485398 | 7.4:-12336916 | MS.gene96967:CDS |
| ACTAATACTGAAAATGATCC+AGG | 0.486166 | 7.4:+12335977 | None:intergenic |
| CTTCTATACTTTGTTCTCAA+GGG | 0.487362 | 7.4:-12337557 | MS.gene96967:intron |
| ACAGTATGCTGTAGATTGAA+TGG | 0.487635 | 7.4:+12335463 | None:intergenic |
| CATCCAGTTCAATTTGCTTG+GGG | 0.488374 | 7.4:-12336127 | MS.gene96967:CDS |
| TTTAGTTCTGCACGTCAAAT+GGG | 0.494615 | 7.4:-12335617 | MS.gene96967:CDS |
| TCTTTGTTTAATGGAATGGA+TGG | 0.497110 | 7.4:+12338658 | None:intergenic |
| GGAGAAAGTTGGGAAGCAAA+AGG | 0.497184 | 7.4:-12335545 | MS.gene96967:CDS |
| TTGGTTAGAGACATAGGATC+AGG | 0.497758 | 7.4:-12335884 | MS.gene96967:CDS |
| TACAAAATCCAAACATTGGA+AGG | 0.499960 | 7.4:-12336162 | MS.gene96967:CDS |
| AAAGAACCTCATCAGGGAAT+GGG | 0.503886 | 7.4:+12338581 | None:intergenic |
| TCAAATGGGAAGTTGTAGAA+TGG | 0.504209 | 7.4:-12335603 | MS.gene96967:CDS |
| AACACCTGACTCTGTTAAGA+AGG | 0.504540 | 7.4:-12336668 | MS.gene96967:CDS |
| TGATACTGTCACGGTTGTTG+GGG | 0.506796 | 7.4:-12335672 | MS.gene96967:CDS |
| GATGCTGTCATTGTTGGTTC+CGG | 0.507668 | 7.4:-12336922 | MS.gene96967:CDS |
| ACAAAGAGAAAGAATTGCTC+AGG | 0.508005 | 7.4:-12336304 | MS.gene96967:CDS |
| GGAGGTAGAGGAAAAGAGAA+AGG | 0.509307 | 7.4:-12338745 | MS.gene96967:CDS |
| TCAGGAGAAGTAAGAAGTGA+AGG | 0.509587 | 7.4:-12335866 | MS.gene96967:CDS |
| GGTAAAATGATGATCTTAGC+TGG | 0.512374 | 7.4:-12336739 | MS.gene96967:CDS |
| GGAATCATGCCAACTCTTGA+CGG | 0.513242 | 7.4:-12336760 | MS.gene96967:CDS |
| GAAAACATGACAAACTTAAG+TGG | 0.514189 | 7.4:-12336094 | MS.gene96967:CDS |
| CTCTGATTATCAATCTGCTA+TGG | 0.514444 | 7.4:-12336608 | MS.gene96967:CDS |
| TGCAGTTGGTGTTAACCCTA+TGG | 0.514783 | 7.4:-12335489 | MS.gene96967:CDS |
| ATTGAACTGGATGGAGATGA+AGG | 0.516885 | 7.4:+12336137 | None:intergenic |
| ATGGGTGAGAATGAAGAAGA+GGG | 0.517130 | 7.4:-12335584 | MS.gene96967:CDS |
| AAAAGTTGAAACCGAAGAAG+AGG | 0.517257 | 7.4:-12337068 | MS.gene96967:CDS |
| GAGAAAGTTGGGAAGCAAAA+GGG | 0.519118 | 7.4:-12335544 | MS.gene96967:CDS |
| TCAGTTCCCATTCCCTGATG+AGG | 0.520253 | 7.4:-12338587 | MS.gene96967:intron |
| CCTCTATTGAGAGGAGGTAG+AGG | 0.522188 | 7.4:-12338757 | MS.gene96967:CDS |
| AGTCCACTAGAAATCATTAG+AGG | 0.522212 | 7.4:+12336184 | None:intergenic |
| AAAAGAACCTCATCAGGGAA+TGG | 0.523565 | 7.4:+12338580 | None:intergenic |
| GACTCGGTATGTAGAAGGAT+TGG | 0.523932 | 7.4:-12336586 | MS.gene96967:CDS |
| CAAATGGGAAGTTGTAGAAT+GGG | 0.524824 | 7.4:-12335602 | MS.gene96967:CDS |
| AACGGCGCAGTTATCCTCAC+TGG | 0.525262 | 7.4:-12336370 | MS.gene96967:CDS |
| TTGGTTGATGCTGTCGAAAA+CGG | 0.527375 | 7.4:-12336388 | MS.gene96967:CDS |
| AAAAGGGTACTGACTCAACT+TGG | 0.540723 | 7.4:-12336411 | MS.gene96967:CDS |
| TTATCAATCTGCTATGGACT+CGG | 0.543005 | 7.4:-12336602 | MS.gene96967:CDS |
| GCTGGCTCAACAGTCGGTGG+AGG | 0.547651 | 7.4:-12336721 | MS.gene96967:CDS |
| GGGTTAACACCAACTGCACT+AGG | 0.549107 | 7.4:+12335494 | None:intergenic |
| GTTGGAACTTATAGGAGTGA+TGG | 0.552017 | 7.4:-12335746 | MS.gene96967:CDS |
| AAGCAACGCCATTGGTGAGG+TGG | 0.554657 | 7.4:-12337774 | MS.gene96967:CDS |
| AATGGGTGAGAATGAAGAAG+AGG | 0.555197 | 7.4:-12335585 | MS.gene96967:CDS |
| AAAGAGAAAGGTTATAGCCA+TGG | 0.560705 | 7.4:-12338733 | MS.gene96967:CDS |
| ATCTTAGCTGGCTCAACAGT+CGG | 0.561829 | 7.4:-12336727 | MS.gene96967:CDS |
| GGACTACAAAATCCAAACAT+TGG | 0.561944 | 7.4:-12336166 | MS.gene96967:CDS |
| GCTGTTATGGTTGTAGAACC+GGG | 0.562546 | 7.4:-12336438 | MS.gene96967:CDS |
| CTGACTCTGTTAAGAAGGAA+TGG | 0.564307 | 7.4:-12336663 | MS.gene96967:CDS |
| ATTGTTGGTTCCGGTAGCGG+TGG | 0.565231 | 7.4:-12336913 | MS.gene96967:CDS |
| AAAGTAACTATTTCATCATG+TGG | 0.568702 | 7.4:-12336223 | MS.gene96967:CDS |
| TAGATTGAATGGTTACCATA+GGG | 0.569161 | 7.4:+12335474 | None:intergenic |
| GTTCATCGCTGAACTTTCCA+AGG | 0.572297 | 7.4:+12336801 | None:intergenic |
| TCTATTAGTCCTTCCTGGAG+AGG | 0.575506 | 7.4:+12337045 | None:intergenic |
| GTGGAAGGCAATAGGGTACA+AGG | 0.575769 | 7.4:-12337103 | MS.gene96967:CDS |
| TGCACCAGAAGCAACGCCAT+TGG | 0.577386 | 7.4:-12337782 | MS.gene96967:CDS |
| TGGCTATAATCCAATGTGGA+AGG | 0.578210 | 7.4:-12337118 | MS.gene96967:CDS |
| AATGATCCAGGTCCTAAAGC+AGG | 0.580745 | 7.4:+12335989 | None:intergenic |
| AAGTTGTATAGAAGGATGAG+AGG | 0.581610 | 7.4:+12338617 | None:intergenic |
| GCTGCAATTCTTGCAAACTC+AGG | 0.581743 | 7.4:-12336880 | MS.gene96967:CDS |
| GAGTGATTGCTGCAACAAGT+TGG | 0.582523 | 7.4:-12336282 | MS.gene96967:CDS |
| GAAGCACCTGCTTTAGGACC+TGG | 0.586542 | 7.4:-12335995 | MS.gene96967:CDS |
| GGAGTTTCTTGATACTGTCA+CGG | 0.587716 | 7.4:-12335681 | MS.gene96967:CDS |
| GGGTACTGACTCAACTTGGT+TGG | 0.591888 | 7.4:-12336407 | MS.gene96967:CDS |
| ATATCGAGTCCTGAGATCCA+TGG | 0.595456 | 7.4:+12335953 | None:intergenic |
| GCTTCAGAAGATCATTATTG+CGG | 0.597873 | 7.4:-12336466 | MS.gene96967:CDS |
| TGATTGCTGCAACAAGTTGG+AGG | 0.600505 | 7.4:-12336279 | MS.gene96967:CDS |
| CATAGAATCCACCTCACCAA+TGG | 0.602414 | 7.4:+12337766 | None:intergenic |
| GATTCTCATCCTCTATTGAG+AGG | 0.604922 | 7.4:-12338766 | MS.gene96967:CDS |
| AAAGGGTTGTATGTCTGTGA+TGG | 0.606815 | 7.4:-12335527 | MS.gene96967:CDS |
| TTAAGTGGTAATAACCATGA+AGG | 0.607925 | 7.4:-12336079 | MS.gene96967:CDS |
| GATCAAAGAAGAAGAACTGG+AGG | 0.609345 | 7.4:-12335702 | MS.gene96967:CDS |
| AAACAAATGGATACCTCTAA+GGG | 0.609941 | 7.4:-12337608 | MS.gene96967:CDS |
| CCCAAGCAAATTGAACTGGA+TGG | 0.610780 | 7.4:+12336128 | None:intergenic |
| AAAAGGCCACTTCCAATGCA+AGG | 0.614999 | 7.4:+12337696 | None:intergenic |
| ACTCGATATGAAAGACAGAA+TGG | 0.616506 | 7.4:-12335939 | MS.gene96967:CDS |
| AAGAAGAGGCCTCTCCAGGA+AGG | 0.616993 | 7.4:-12337054 | MS.gene96967:CDS |
| CCTCCTCTAATGATTTCTAG+TGG | 0.623746 | 7.4:-12336187 | MS.gene96967:CDS |
| AACGAGCTCTATGAATCAGG+TGG | 0.631365 | 7.4:-12336781 | MS.gene96967:CDS |
| AGTGGTAATAACCATGAAGG+AGG | 0.637889 | 7.4:-12336076 | MS.gene96967:CDS |
| TAATCAGAGCTTGTGAAAAG+CGG | 0.638436 | 7.4:+12336622 | None:intergenic |
| CAGAAGCAACGCCATTGGTG+AGG | 0.639836 | 7.4:-12337777 | MS.gene96967:CDS |
| GATACTGTCACGGTTGTTGG+GGG | 0.646469 | 7.4:-12335671 | MS.gene96967:CDS |
| CCACTAGAAATCATTAGAGG+AGG | 0.647396 | 7.4:+12336187 | None:intergenic |
| TGGAGGTTCAGCTATAAACT+GGG | 0.647546 | 7.4:-12336704 | MS.gene96967:CDS |
| TTAGCTGGCTCAACAGTCGG+TGG | 0.653010 | 7.4:-12336724 | MS.gene96967:CDS |
| TCTCATCCTCTATTGAGAGG+AGG | 0.658446 | 7.4:-12338763 | MS.gene96967:CDS |
| TAAATGGCTATAATCCAATG+TGG | 0.670511 | 7.4:-12337122 | MS.gene96967:CDS |
| AGCCAATACATGCATCTGAG+AGG | 0.679202 | 7.4:+12338702 | None:intergenic |
| TCCAAGGAAGAATAATCCTG+AGG | 0.684386 | 7.4:+12336817 | None:intergenic |
| CAAAGTTCACTTCTGGACCG+CGG | 0.689159 | 7.4:+12335647 | None:intergenic |
| CTGTTATGGTTGTAGAACCG+GGG | 0.695824 | 7.4:-12336437 | MS.gene96967:CDS |
| CAAATGGATACCTCTAAGGG+CGG | 0.696692 | 7.4:-12337605 | MS.gene96967:CDS |
| TCTCAGCTCTACATCCAGTG+AGG | 0.723767 | 7.4:+12336356 | None:intergenic |
| GAAGGCAATAGGGTACAAGG+TGG | 0.747351 | 7.4:-12337100 | MS.gene96967:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCATTTTTAATAAAAACAT+TGG | - | chr7.4:12337016-12337035 | MS.gene96967:CDS | 10.0% |
| !!! | TCATTTTTAATAAAAACATT+GGG | - | chr7.4:12337017-12337036 | MS.gene96967:CDS | 10.0% |
| !! | GATTAAAAAATGGATAAAAT+TGG | + | chr7.4:12335645-12335664 | None:intergenic | 15.0% |
| !! | GCATAATTAAAATGATAAAA+TGG | + | chr7.4:12336678-12336697 | None:intergenic | 15.0% |
| !!! | ATTTTTTTCATATGAGTATT+AGG | - | chr7.4:12336360-12336379 | MS.gene96967:CDS | 15.0% |
| !! | AAAATCTTAGAATTGGATTA+AGG | - | chr7.4:12338388-12338407 | MS.gene96967:intron | 20.0% |
| !! | AAATTGGTCATTTAAAGAAA+TGG | - | chr7.4:12336934-12336953 | MS.gene96967:CDS | 20.0% |
| !! | ATCTTTCATTAACATTTGAA+AGG | - | chr7.4:12336083-12336102 | MS.gene96967:CDS | 20.0% |
| !! | ATTATTGAACTAAACTAGTA+AGG | + | chr7.4:12336304-12336323 | None:intergenic | 20.0% |
| !! | TGTTATATGATCTACAAAAT+TGG | - | chr7.4:12336918-12336937 | MS.gene96967:CDS | 20.0% |
| !!! | AAGATTAGGCTTTTTTTTAA+TGG | + | chr7.4:12335930-12335949 | None:intergenic | 20.0% |
| !!! | AGACTTTATTTATGTTCAAA+AGG | + | chr7.4:12336197-12336216 | None:intergenic | 20.0% |
| !!! | TCATTTTAATTATGCTCATA+TGG | - | chr7.4:12336683-12336702 | MS.gene96967:CDS | 20.0% |
| !!! | TGCTATTAATACACTTTTTT+TGG | + | chr7.4:12336813-12336832 | None:intergenic | 20.0% |
| ! | AAAATCCTGTATCAATGTTT+CGG | - | chr7.4:12335848-12335867 | MS.gene96967:CDS | 25.0% |
| ! | AAAGTAACTATTTCATCATG+TGG | - | chr7.4:12337973-12337992 | MS.gene96967:intron | 25.0% |
| ! | AATGGTCAAAAGAAAACAAA+TGG | - | chr7.4:12336575-12336594 | MS.gene96967:CDS | 25.0% |
| ! | ACATGATGAAATAGTTACTT+TGG | + | chr7.4:12337974-12337993 | None:intergenic | 25.0% |
| ! | CTAAATATCAGTGAAAGATT+AGG | + | chr7.4:12335944-12335963 | None:intergenic | 25.0% |
| ! | GACAAAAAATCAAATGTGAA+GGG | - | chr7.4:12338472-12338491 | MS.gene96967:intron | 25.0% |
| ! | GTTATAAAGCTGATCAAAAT+GGG | - | chr7.4:12336979-12336998 | MS.gene96967:CDS | 25.0% |
| ! | TAAAATTGCAGAATCACTTA+AGG | - | chr7.4:12338764-12338783 | MS.gene96967:CDS | 25.0% |
| ! | TATCTATCATGTCATATAAG+TGG | - | chr7.4:12335690-12335709 | MS.gene96967:CDS | 25.0% |
| ! | TCTTTCACTGATATTTAGAA+AGG | - | chr7.4:12335946-12335965 | MS.gene96967:CDS | 25.0% |
| ! | TGTTCAAAAGGATAAAGATA+CGG | + | chr7.4:12336185-12336204 | None:intergenic | 25.0% |
| ! | TTCTTATAGACTTGATCAAA+TGG | - | chr7.4:12338359-12338378 | MS.gene96967:intron | 25.0% |
| ! | TTTCACAGTTAAACCAAAAT+GGG | + | chr7.4:12336875-12336894 | None:intergenic | 25.0% |
| !! | AAAGTGATCATTCTAGAAAA+AGG | - | chr7.4:12337343-12337362 | MS.gene96967:intron | 25.0% |
| !! | AACATTATGTCACACATTTT+AGG | - | chr7.4:12336750-12336769 | MS.gene96967:CDS | 25.0% |
| !! | AAGCGGTAGTTTATATTTTT+CGG | + | chr7.4:12337560-12337579 | None:intergenic | 25.0% |
| !! | GTGCTTCTATAATGATTTTT+GGG | + | chr7.4:12338188-12338207 | None:intergenic | 25.0% |
| !! | TAGTTACTTTGGATTCTATT+TGG | + | chr7.4:12337963-12337982 | None:intergenic | 25.0% |
| !! | TGCTTCTATAATGATTTTTG+GGG | + | chr7.4:12338187-12338206 | None:intergenic | 25.0% |
| !! | TTAAGTTTGTCATGTTTTCA+GGG | + | chr7.4:12338101-12338120 | None:intergenic | 25.0% |
| !!! | CATTTTGATCAGCTTTATAA+CGG | + | chr7.4:12336980-12336999 | None:intergenic | 25.0% |
| AAAACAAATGGATACCTCTA+AGG | - | chr7.4:12336587-12336606 | MS.gene96967:CDS | 30.0% | |
| AAAATCAAGTTCTTCGGAAA+GGG | - | chr7.4:12337665-12337684 | MS.gene96967:CDS | 30.0% | |
| AAACAAATGGATACCTCTAA+GGG | - | chr7.4:12336588-12336607 | MS.gene96967:CDS | 30.0% | |
| ACTAATACTGAAAATGATCC+AGG | + | chr7.4:12338222-12338241 | None:intergenic | 30.0% | |
| CGTTATAAAGCTGATCAAAA+TGG | - | chr7.4:12336978-12336997 | MS.gene96967:CDS | 30.0% | |
| CTTCTATACTTTGTTCTCAA+GGG | - | chr7.4:12336639-12336658 | MS.gene96967:CDS | 30.0% | |
| GAAAACATGACAAACTTAAG+TGG | - | chr7.4:12338102-12338121 | MS.gene96967:intron | 30.0% | |
| GAAAAGCAAAACATGATGTT+TGG | + | chr7.4:12336163-12336182 | None:intergenic | 30.0% | |
| GACAGAGAAAATCTTAGAAT+TGG | - | chr7.4:12338381-12338400 | MS.gene96967:intron | 30.0% | |
| GAGAAGAAATTCTCAAGAAA+TGG | - | chr7.4:12336557-12336576 | MS.gene96967:CDS | 30.0% | |
| GCTTTCAAAATCAAGTTCTT+CGG | - | chr7.4:12337659-12337678 | MS.gene96967:CDS | 30.0% | |
| GGACAAAAAATCAAATGTGA+AGG | - | chr7.4:12338471-12338490 | MS.gene96967:intron | 30.0% | |
| GGATTCTGTCATTCAAATTA+GGG | - | chr7.4:12336452-12336471 | MS.gene96967:CDS | 30.0% | |
| GGATTGGATTAATGTAGAAT+TGG | + | chr7.4:12337191-12337210 | None:intergenic | 30.0% | |
| GTTTCACAGTTAAACCAAAA+TGG | + | chr7.4:12336876-12336895 | None:intergenic | 30.0% | |
| TAAATGGCTATAATCCAATG+TGG | - | chr7.4:12337074-12337093 | MS.gene96967:CDS | 30.0% | |
| TAATGGAATGGATGGAAAAA+GGG | + | chr7.4:12335533-12335552 | None:intergenic | 30.0% | |
| TACAAAATCCAAACATTGGA+AGG | - | chr7.4:12338034-12338053 | MS.gene96967:intron | 30.0% | |
| TAGAGCTGAGAAATTCATAA+TGG | - | chr7.4:12337852-12337871 | MS.gene96967:intron | 30.0% | |
| TAGATTGAATGGTTACCATA+GGG | + | chr7.4:12338725-12338744 | None:intergenic | 30.0% | |
| TCAGAGAATTTGAGAACAAA+AGG | + | chr7.4:12336520-12336539 | None:intergenic | 30.0% | |
| TCTGTATCAGTATTTCATAG+TGG | - | chr7.4:12335878-12335897 | MS.gene96967:CDS | 30.0% | |
| TCTTCTATACTTTGTTCTCA+AGG | - | chr7.4:12336638-12336657 | MS.gene96967:CDS | 30.0% | |
| TGGATTCTGTCATTCAAATT+AGG | - | chr7.4:12336451-12336470 | MS.gene96967:CDS | 30.0% | |
| TTAAGTGGTAATAACCATGA+AGG | - | chr7.4:12338117-12338136 | MS.gene96967:intron | 30.0% | |
| TTAATGGAATGGATGGAAAA+AGG | + | chr7.4:12335534-12335553 | None:intergenic | 30.0% | |
| TTGGATTAAGGAAGTCTTTA+AGG | - | chr7.4:12338400-12338419 | MS.gene96967:intron | 30.0% | |
| ! | ATAATGGAAGATGGAAAGAA+TGG | - | chr7.4:12337868-12337887 | MS.gene96967:intron | 30.0% |
| ! | CATTTTCAGTATTAGTTCCA+TGG | - | chr7.4:12338226-12338245 | MS.gene96967:intron | 30.0% |
| ! | CTTAAGTTTGTCATGTTTTC+AGG | + | chr7.4:12338102-12338121 | None:intergenic | 30.0% |
| ! | GACTTCTTTGTTTAATGGAA+TGG | + | chr7.4:12335545-12335564 | None:intergenic | 30.0% |
| ! | GAGAAATTCATAATGGAAGA+TGG | - | chr7.4:12337859-12337878 | MS.gene96967:intron | 30.0% |
| ! | GGTGCTTCTATAATGATTTT+TGG | + | chr7.4:12338189-12338208 | None:intergenic | 30.0% |
| ! | TCTTTGTTTAATGGAATGGA+TGG | + | chr7.4:12335541-12335560 | None:intergenic | 30.0% |
| ! | TGAGAGACTTCTTTGTTTAA+TGG | + | chr7.4:12335550-12335569 | None:intergenic | 30.0% |
| !! | AAGGAAGTCTTTAAGGATTT+TGG | - | chr7.4:12338407-12338426 | MS.gene96967:intron | 30.0% |
| !! | CAAATTCTCTGAGATTTCTT+TGG | - | chr7.4:12336528-12336547 | MS.gene96967:CDS | 30.0% |
| !! | TGATGTTTGGTAACGAATTT+CGG | + | chr7.4:12336150-12336169 | None:intergenic | 30.0% |
| !! | TTCTATAATGATTTTTGGGG+TGG | + | chr7.4:12338184-12338203 | None:intergenic | 30.0% |
| !!! | TTTTGGTTTAACTGTGAAAC+TGG | - | chr7.4:12336876-12336895 | MS.gene96967:CDS | 30.0% |
| AAAAGTTGAAACCGAAGAAG+AGG | - | chr7.4:12337128-12337147 | MS.gene96967:CDS | 35.0% | |
| AAAGAGAAAGGTTATAGCCA+TGG | - | chr7.4:12335463-12335482 | MS.gene96967:CDS | 35.0% | |
| AAATGTGATGCTGTCATTGT+TGG | - | chr7.4:12337268-12337287 | MS.gene96967:intron | 35.0% | |
| AAGTTATGATTCCTCCTTCA+TGG | + | chr7.4:12338134-12338153 | None:intergenic | 35.0% | |
| AAGTTGTATAGAAGGATGAG+AGG | + | chr7.4:12335582-12335601 | None:intergenic | 35.0% | |
| ACAAAGAGAAAGAATTGCTC+AGG | - | chr7.4:12337892-12337911 | MS.gene96967:intron | 35.0% | |
| ACAGTATGCTGTAGATTGAA+TGG | + | chr7.4:12338736-12338755 | None:intergenic | 35.0% | |
| ACTCGATATGAAAGACAGAA+TGG | - | chr7.4:12338257-12338276 | MS.gene96967:intron | 35.0% | |
| AGAACCAGAAGTTGTATAGA+AGG | + | chr7.4:12335590-12335609 | None:intergenic | 35.0% | |
| AGTCCACTAGAAATCATTAG+AGG | + | chr7.4:12338015-12338034 | None:intergenic | 35.0% | |
| CAAAATCAAGTTCTTCGGAA+AGG | - | chr7.4:12337664-12337683 | MS.gene96967:CDS | 35.0% | |
| CAAATGGGAAGTTGTAGAAT+GGG | - | chr7.4:12338594-12338613 | MS.gene96967:CDS | 35.0% | |
| CTCTGATTATCAATCTGCTA+TGG | - | chr7.4:12337588-12337607 | MS.gene96967:CDS | 35.0% | |
| CTGTTGAAGTTGGAACTTAT+AGG | - | chr7.4:12338442-12338461 | MS.gene96967:intron | 35.0% | |
| GCTTCAGAAGATCATTATTG+CGG | - | chr7.4:12337730-12337749 | MS.gene96967:CDS | 35.0% | |
| GGACTACAAAATCCAAACAT+TGG | - | chr7.4:12338030-12338049 | MS.gene96967:intron | 35.0% | |
| GGTAAAATGATGATCTTAGC+TGG | - | chr7.4:12337457-12337476 | MS.gene96967:intron | 35.0% | |
| GTAGATTGAATGGTTACCAT+AGG | + | chr7.4:12338726-12338745 | None:intergenic | 35.0% | |
| TAATCAGAGCTTGTGAAAAG+CGG | + | chr7.4:12337577-12337596 | None:intergenic | 35.0% | |
| TCAAATGGGAAGTTGTAGAA+TGG | - | chr7.4:12338593-12338612 | MS.gene96967:CDS | 35.0% | |
| TCATCCTTCTATACAACTTC+TGG | - | chr7.4:12335583-12335602 | MS.gene96967:CDS | 35.0% | |
| TCTGAGAGGTTAAAAATCCA+TGG | + | chr7.4:12335483-12335502 | None:intergenic | 35.0% | |
| TGATGAGAATGGAGAAAGTT+GGG | - | chr7.4:12338641-12338660 | MS.gene96967:CDS | 35.0% | |
| TGTCTCTAACCAATGCAAAA+AGG | + | chr7.4:12338305-12338324 | None:intergenic | 35.0% | |
| TTATCAATCTGCTATGGACT+CGG | - | chr7.4:12337594-12337613 | MS.gene96967:CDS | 35.0% | |
| TTGATGAGAATGGAGAAAGT+TGG | - | chr7.4:12338640-12338659 | MS.gene96967:CDS | 35.0% | |
| ! | AACTGCTAACCTTTTTGCAT+TGG | - | chr7.4:12338293-12338312 | MS.gene96967:intron | 35.0% |
| ! | ATCATTTTACCGTCAAGAGT+TGG | + | chr7.4:12337448-12337467 | None:intergenic | 35.0% |
| ! | TGATCAGCTTTATAACGGTT+CGG | + | chr7.4:12336975-12336994 | None:intergenic | 35.0% |
| !! | ATTATAGAAGCACCTGCTTT+AGG | - | chr7.4:12338195-12338214 | MS.gene96967:intron | 35.0% |
| !! | TTTAGTTCTGCACGTCAAAT+GGG | - | chr7.4:12338579-12338598 | MS.gene96967:intron | 35.0% |
| !! | TTTGCATTGGTTAGAGACAT+AGG | - | chr7.4:12338306-12338325 | MS.gene96967:intron | 35.0% |
| !!! | GTCTTTAAGGATTTTGGTTG+CGG | - | chr7.4:12338413-12338432 | MS.gene96967:intron | 35.0% |
| !!! | TTAGGGACACTTTTTCTTTG+TGG | - | chr7.4:12336469-12336488 | MS.gene96967:CDS | 35.0% |
| AAAAGAACCTCATCAGGGAA+TGG | + | chr7.4:12335619-12335638 | None:intergenic | 40.0% | |
| AAAGAACCTCATCAGGGAAT+GGG | + | chr7.4:12335618-12335637 | None:intergenic | 40.0% | |
| AAAGGGTTGTATGTCTGTGA+TGG | - | chr7.4:12338669-12338688 | MS.gene96967:CDS | 40.0% | |
| AACACCTGACTCTGTTAAGA+AGG | - | chr7.4:12337528-12337547 | MS.gene96967:intron | 40.0% | |
| AACCTCTCAGATGCATGTAT+TGG | - | chr7.4:12335492-12335511 | MS.gene96967:CDS | 40.0% | |
| AACTACAACTGCTATGCAGT+CGG | - | chr7.4:12335969-12335988 | MS.gene96967:CDS | 40.0% | |
| AATCCAATGTGGAAGGCAAT+AGG | - | chr7.4:12337085-12337104 | MS.gene96967:CDS | 40.0% | |
| AATGGGTGAGAATGAAGAAG+AGG | - | chr7.4:12338611-12338630 | MS.gene96967:CDS | 40.0% | |
| ACAGGTATTCAACACATGTC+TGG | - | chr7.4:12335757-12335776 | MS.gene96967:CDS | 40.0% | |
| ACATCTGTCTGCAGCAATTA+GGG | + | chr7.4:12337055-12337074 | None:intergenic | 40.0% | |
| ACTGATACAGACACTGACAA+TGG | + | chr7.4:12336035-12336054 | None:intergenic | 40.0% | |
| AGGGATCAAAGAAGAAGAAC+TGG | - | chr7.4:12338491-12338510 | MS.gene96967:intron | 40.0% | |
| AGTGGTAATAACCATGAAGG+AGG | - | chr7.4:12338120-12338139 | MS.gene96967:intron | 40.0% | |
| ATCCAATCCCTGAGTGAAAA+AGG | - | chr7.4:12337202-12337221 | MS.gene96967:intron | 40.0% | |
| ATCCAATGTGGAAGGCAATA+GGG | - | chr7.4:12337086-12337105 | MS.gene96967:CDS | 40.0% | |
| ATGAACGAGCTCTATGAATC+AGG | - | chr7.4:12337412-12337431 | MS.gene96967:intron | 40.0% | |
| ATGGGTGAGAATGAAGAAGA+GGG | - | chr7.4:12338612-12338631 | MS.gene96967:CDS | 40.0% | |
| ATTCAACACATGTCTGGTGT+TGG | - | chr7.4:12335763-12335782 | MS.gene96967:CDS | 40.0% | |
| ATTGAACTGGATGGAGATGA+AGG | + | chr7.4:12338062-12338081 | None:intergenic | 40.0% | |
| CATTCCTTCTTAACAGAGTC+AGG | + | chr7.4:12337535-12337554 | None:intergenic | 40.0% | |
| CATTGTCCAAAGTTCACTTC+TGG | + | chr7.4:12338559-12338578 | None:intergenic | 40.0% | |
| CCACTAGAAATCATTAGAGG+AGG | + | chr7.4:12338012-12338031 | None:intergenic | 40.0% | |
| CTGACTCTGTTAAGAAGGAA+TGG | - | chr7.4:12337533-12337552 | MS.gene96967:intron | 40.0% | |
| CTTCATCTTCAGTGACTTCA+AGG | + | chr7.4:12337228-12337247 | None:intergenic | 40.0% | |
| GAGAAAGTTGGGAAGCAAAA+GGG | - | chr7.4:12338652-12338671 | MS.gene96967:CDS | 40.0% | |
| GATCAAAGAAGAAGAACTGG+AGG | - | chr7.4:12338494-12338513 | MS.gene96967:intron | 40.0% | |
| GATTCTCATCCTCTATTGAG+AGG | - | chr7.4:12335430-12335449 | MS.gene96967:CDS | 40.0% | |
| GGAGTTTCTTGATACTGTCA+CGG | - | chr7.4:12338515-12338534 | MS.gene96967:intron | 40.0% | |
| GGTGAAAAAGAACCTCATCA+GGG | + | chr7.4:12335624-12335643 | None:intergenic | 40.0% | |
| GTATTAGTTCCATGGATCTC+AGG | - | chr7.4:12338234-12338253 | MS.gene96967:intron | 40.0% | |
| GTCAAAAATGTCGATGCTAC+AGG | + | chr7.4:12335739-12335758 | None:intergenic | 40.0% | |
| GTTGGAACTTATAGGAGTGA+TGG | - | chr7.4:12338450-12338469 | MS.gene96967:intron | 40.0% | |
| TACATCTGTCTGCAGCAATT+AGG | + | chr7.4:12337056-12337075 | None:intergenic | 40.0% | |
| TAGATCATCATGCAAGAGCA+GGG | - | chr7.4:12336276-12336295 | MS.gene96967:CDS | 40.0% | |
| TCAGGAGAAGTAAGAAGTGA+AGG | - | chr7.4:12338330-12338349 | MS.gene96967:intron | 40.0% | |
| TCCAAGGAAGAATAATCCTG+AGG | + | chr7.4:12337382-12337401 | None:intergenic | 40.0% | |
| TCCTCAGGATTATTCTTCCT+TGG | - | chr7.4:12337378-12337397 | MS.gene96967:intron | 40.0% | |
| TGAAGGTTCCTTCCAATGTT+TGG | + | chr7.4:12338045-12338064 | None:intergenic | 40.0% | |
| TGCTGTTATGGTTGTAGAAC+CGG | - | chr7.4:12337757-12337776 | MS.gene96967:CDS | 40.0% | |
| TGGAGGTTCAGCTATAAACT+GGG | - | chr7.4:12337492-12337511 | MS.gene96967:intron | 40.0% | |
| TGGCTATAATCCAATGTGGA+AGG | - | chr7.4:12337078-12337097 | MS.gene96967:CDS | 40.0% | |
| TGGTGAAAAAGAACCTCATC+AGG | + | chr7.4:12335625-12335644 | None:intergenic | 40.0% | |
| TGTAGAACCGGGGATAAAAA+GGG | - | chr7.4:12337769-12337788 | MS.gene96967:CDS | 40.0% | |
| TTGATACTGTCACGGTTGTT+GGG | - | chr7.4:12338523-12338542 | MS.gene96967:intron | 40.0% | |
| TTGCTGCAGACAGATGTAAA+TGG | - | chr7.4:12337058-12337077 | MS.gene96967:CDS | 40.0% | |
| TTGGTTAGAGACATAGGATC+AGG | - | chr7.4:12338312-12338331 | MS.gene96967:intron | 40.0% | |
| TTGTAGAACCGGGGATAAAA+AGG | - | chr7.4:12337768-12337787 | MS.gene96967:CDS | 40.0% | |
| TTGTCTCTATTAGTCCTTCC+TGG | + | chr7.4:12337159-12337178 | None:intergenic | 40.0% | |
| ! | CATCCAGTTCAATTTGCTTG+GGG | - | chr7.4:12338069-12338088 | MS.gene96967:intron | 40.0% |
| ! | CCATCCAGTTCAATTTGCTT+GGG | - | chr7.4:12338068-12338087 | MS.gene96967:intron | 40.0% |
| ! | CCTCCTCTAATGATTTCTAG+TGG | - | chr7.4:12338009-12338028 | MS.gene96967:intron | 40.0% |
| ! | TCCATCCAGTTCAATTTGCT+TGG | - | chr7.4:12338067-12338086 | MS.gene96967:intron | 40.0% |
| ! | TCGAAACACAGTTCCCATTT+TGG | - | chr7.4:12336859-12336878 | MS.gene96967:CDS | 40.0% |
| ! | TTGGTTGATGCTGTCGAAAA+CGG | - | chr7.4:12337808-12337827 | MS.gene96967:CDS | 40.0% |
| !! | AAAAGGGTACTGACTCAACT+TGG | - | chr7.4:12337785-12337804 | MS.gene96967:CDS | 40.0% |
| !! | GTTTAGTTCTGCACGTCAAA+TGG | - | chr7.4:12338578-12338597 | MS.gene96967:intron | 40.0% |
| !! | TGGAAAAAGGGTGTCACATA+TGG | + | chr7.4:12335521-12335540 | None:intergenic | 40.0% |
| !! | TTCAAGGCCTTTTTCACTCA+GGG | + | chr7.4:12337212-12337231 | None:intergenic | 40.0% |
| !!! | AGGAGAGTATTTTGTTCCTC+AGG | - | chr7.4:12337363-12337382 | MS.gene96967:intron | 40.0% |
| !!! | GTAGCATCGACATTTTTGAC+AGG | - | chr7.4:12335739-12335758 | MS.gene96967:CDS | 40.0% |
| !!! | TTTAAGGATTTTGGTTGCGG+CGG | - | chr7.4:12338416-12338435 | MS.gene96967:intron | 40.0% |
| AAAAGGCCACTTCCAATGCA+AGG | + | chr7.4:12336503-12336522 | None:intergenic | 45.0% | |
| AACGAGCTCTATGAATCAGG+TGG | - | chr7.4:12337415-12337434 | MS.gene96967:intron | 45.0% | |
| AACTGAAACTGCTGTGCAGT+CGG | - | chr7.4:12336106-12336125 | MS.gene96967:CDS | 45.0% | |
| AATGATCCAGGTCCTAAAGC+AGG | + | chr7.4:12338210-12338229 | None:intergenic | 45.0% | |
| AGATCATCATGCAAGAGCAG+GGG | - | chr7.4:12336277-12336296 | MS.gene96967:CDS | 45.0% | |
| AGCCAATACATGCATCTGAG+AGG | + | chr7.4:12335497-12335516 | None:intergenic | 45.0% | |
| ATATCGAGTCCTGAGATCCA+TGG | + | chr7.4:12338246-12338265 | None:intergenic | 45.0% | |
| CATAGAATCCACCTCACCAA+TGG | + | chr7.4:12336433-12336452 | None:intergenic | 45.0% | |
| CATGTGTCAGTGTCATGTCT+CGG | + | chr7.4:12335793-12335812 | None:intergenic | 45.0% | |
| CCCAAGCAAATTGAACTGGA+TGG | + | chr7.4:12338071-12338090 | None:intergenic | 45.0% | |
| CGACACCGAAACATTGATAC+AGG | + | chr7.4:12335856-12335875 | None:intergenic | 45.0% | |
| CTAGATCATCATGCAAGAGC+AGG | - | chr7.4:12336275-12336294 | MS.gene96967:CDS | 45.0% | |
| CTCTTTCCTTGCATTGGAAG+TGG | - | chr7.4:12336494-12336513 | MS.gene96967:CDS | 45.0% | |
| CTGTTATGGTTGTAGAACCG+GGG | - | chr7.4:12337759-12337778 | MS.gene96967:CDS | 45.0% | |
| CTTGATACTGTCACGGTTGT+TGG | - | chr7.4:12338522-12338541 | MS.gene96967:intron | 45.0% | |
| GAGTGATTGCTGCAACAAGT+TGG | - | chr7.4:12337914-12337933 | MS.gene96967:intron | 45.0% | |
| GCTGCAATTCTTGCAAACTC+AGG | - | chr7.4:12337316-12337335 | MS.gene96967:intron | 45.0% | |
| GCTGTTATGGTTGTAGAACC+GGG | - | chr7.4:12337758-12337777 | MS.gene96967:CDS | 45.0% | |
| GGAATCATGCCAACTCTTGA+CGG | - | chr7.4:12337436-12337455 | MS.gene96967:intron | 45.0% | |
| GGAGAAAGTTGGGAAGCAAA+AGG | - | chr7.4:12338651-12338670 | MS.gene96967:CDS | 45.0% | |
| GGAGGTAGAGGAAAAGAGAA+AGG | - | chr7.4:12335451-12335470 | MS.gene96967:CDS | 45.0% | |
| GTGGAACTCTTTCCTTGCAT+TGG | - | chr7.4:12336488-12336507 | MS.gene96967:CDS | 45.0% | |
| GTGGAGGTTCAGCTATAAAC+TGG | - | chr7.4:12337491-12337510 | MS.gene96967:intron | 45.0% | |
| GTTCATCGCTGAACTTTCCA+AGG | + | chr7.4:12337398-12337417 | None:intergenic | 45.0% | |
| TACCCTATTGCCTTCCACAT+TGG | + | chr7.4:12337091-12337110 | None:intergenic | 45.0% | |
| TAGCCCCAAGCAAATTGAAC+TGG | + | chr7.4:12338075-12338094 | None:intergenic | 45.0% | |
| TCTATTAGTCCTTCCTGGAG+AGG | + | chr7.4:12337154-12337173 | None:intergenic | 45.0% | |
| TCTCATCCTCTATTGAGAGG+AGG | - | chr7.4:12335433-12335452 | MS.gene96967:CDS | 45.0% | |
| TGATACTGTCACGGTTGTTG+GGG | - | chr7.4:12338524-12338543 | MS.gene96967:intron | 45.0% | |
| ! | AGTGTTTTGCCTAGTGCAGT+TGG | - | chr7.4:12338693-12338712 | MS.gene96967:CDS | 45.0% |
| ! | ATCTTAGCTGGCTCAACAGT+CGG | - | chr7.4:12337469-12337488 | MS.gene96967:intron | 45.0% |
| ! | CAAATGGATACCTCTAAGGG+CGG | - | chr7.4:12336591-12336610 | MS.gene96967:CDS | 45.0% |
| ! | CATTGGTGAGGTGGATTCTA+TGG | - | chr7.4:12336431-12336450 | MS.gene96967:CDS | 45.0% |
| ! | CTATGGACTCGGTATGTAGA+AGG | - | chr7.4:12337605-12337624 | MS.gene96967:CDS | 45.0% |
| ! | GACTCGGTATGTAGAAGGAT+TGG | - | chr7.4:12337610-12337629 | MS.gene96967:CDS | 45.0% |
| ! | GTCAGTACCCTTTTTATCCC+CGG | + | chr7.4:12337779-12337798 | None:intergenic | 45.0% |
| ! | TATTGCGGTTCGTGCTGTTA+TGG | - | chr7.4:12337745-12337764 | MS.gene96967:CDS | 45.0% |
| ! | TGATTGCTGCAACAAGTTGG+AGG | - | chr7.4:12337917-12337936 | MS.gene96967:intron | 45.0% |
| !! | CTTCAAGGCCTTTTTCACTC+AGG | + | chr7.4:12337213-12337232 | None:intergenic | 45.0% |
| !! | GATGCTGTCATTGTTGGTTC+CGG | - | chr7.4:12337274-12337293 | MS.gene96967:intron | 45.0% |
| !! | TGCAGTTGGTGTTAACCCTA+TGG | - | chr7.4:12338707-12338726 | MS.gene96967:CDS | 45.0% |
| !!! | TTAAGGATTTTGGTTGCGGC+GGG | - | chr7.4:12338417-12338436 | MS.gene96967:intron | 45.0% |
| !! | ATAAAAAATAGATTAAAAAA+TGG | + | chr7.4:12335655-12335674 | None:intergenic | 5.0% |
| AACACAAACACCGCCCTTAG+AGG | + | chr7.4:12336604-12336623 | None:intergenic | 50.0% | |
| AACTGCTATGCAGTCGGAGA+CGG | - | chr7.4:12335975-12335994 | MS.gene96967:CDS | 50.0% | |
| CAAAGTTCACTTCTGGACCG+CGG | + | chr7.4:12338552-12338571 | None:intergenic | 50.0% | |
| CCTCTACCTCCTCTCAATAG+AGG | + | chr7.4:12335442-12335461 | None:intergenic | 50.0% | |
| CCTCTATTGAGAGGAGGTAG+AGG | - | chr7.4:12335439-12335458 | MS.gene96967:CDS | 50.0% | |
| GAAGGCAATAGGGTACAAGG+TGG | - | chr7.4:12337096-12337115 | MS.gene96967:CDS | 50.0% | |
| GATACTGTCACGGTTGTTGG+GGG | - | chr7.4:12338525-12338544 | MS.gene96967:intron | 50.0% | |
| GGGTTAACACCAACTGCACT+AGG | + | chr7.4:12338705-12338724 | None:intergenic | 50.0% | |
| GTGGAAGGCAATAGGGTACA+AGG | - | chr7.4:12337093-12337112 | MS.gene96967:CDS | 50.0% | |
| TCAGTTCCCATTCCCTGATG+AGG | - | chr7.4:12335609-12335628 | MS.gene96967:CDS | 50.0% | |
| TCTCAGCTCTACATCCAGTG+AGG | + | chr7.4:12337843-12337862 | None:intergenic | 50.0% | |
| !! | GAGGGTGCAGTTGATGAGAA+TGG | - | chr7.4:12338630-12338649 | MS.gene96967:CDS | 50.0% |
| !! | GGCCTTTTTCACTCAGGGAT+TGG | + | chr7.4:12337207-12337226 | None:intergenic | 50.0% |
| !! | GGGTACTGACTCAACTTGGT+TGG | - | chr7.4:12337789-12337808 | MS.gene96967:CDS | 50.0% |
| !! | GTCATTGTTGGTTCCGGTAG+CGG | - | chr7.4:12337280-12337299 | MS.gene96967:intron | 50.0% |
| AACGGCGCAGTTATCCTCAC+TGG | - | chr7.4:12337826-12337845 | MS.gene96967:intron | 55.0% | |
| AAGAAGAGGCCTCTCCAGGA+AGG | - | chr7.4:12337142-12337161 | MS.gene96967:intron | 55.0% | |
| AAGCAACGCCATTGGTGAGG+TGG | - | chr7.4:12336422-12336441 | MS.gene96967:CDS | 55.0% | |
| CAGAAGCAACGCCATTGGTG+AGG | - | chr7.4:12336419-12336438 | MS.gene96967:CDS | 55.0% | |
| CGCGGTCCAGAAGTGAACTT+TGG | - | chr7.4:12338550-12338569 | MS.gene96967:intron | 55.0% | |
| CTCACCAATGGCGTTGCTTC+TGG | + | chr7.4:12336421-12336440 | None:intergenic | 55.0% | |
| TCCTGGAGAGGCCTCTTCTT+CGG | + | chr7.4:12337142-12337161 | None:intergenic | 55.0% | |
| TGAAACTGCTGTGCAGTCGG+AGG | - | chr7.4:12336109-12336128 | MS.gene96967:CDS | 55.0% | |
| TGCACCAGAAGCAACGCCAT+TGG | - | chr7.4:12336414-12336433 | MS.gene96967:CDS | 55.0% | |
| ! | CGGAAAGGGTGCGAGAGAAT+CGG | - | chr7.4:12337679-12337698 | MS.gene96967:CDS | 55.0% |
| ! | TTAGCTGGCTCAACAGTCGG+TGG | - | chr7.4:12337472-12337491 | MS.gene96967:intron | 55.0% |
| !! | ATTGTTGGTTCCGGTAGCGG+TGG | - | chr7.4:12337283-12337302 | MS.gene96967:intron | 55.0% |
| !! | GAAGCACCTGCTTTAGGACC+TGG | - | chr7.4:12338201-12338220 | MS.gene96967:intron | 55.0% |
| ACCGAAGAAGAGGCCTCTCC+AGG | - | chr7.4:12337138-12337157 | MS.gene96967:intron | 60.0% | |
| AGTCGGAGACGGCGTAGATG+TGG | - | chr7.4:12335986-12336005 | MS.gene96967:CDS | 60.0% | |
| TGCAACTCCTCCACCGCTAC+CGG | + | chr7.4:12337296-12337315 | None:intergenic | 60.0% | |
| ! | GTCGGAGGCGTAGGGTCAAT+TGG | - | chr7.4:12336124-12336143 | MS.gene96967:CDS | 60.0% |
| GCGGCGGGAGCTGTTGAAGT+TGG | - | chr7.4:12338432-12338451 | MS.gene96967:intron | 65.0% | |
| TCACGGTTGTTGGGGGACCG+CGG | - | chr7.4:12338532-12338551 | MS.gene96967:intron | 65.0% | |
| ! | GCTGGCTCAACAGTCGGTGG+AGG | - | chr7.4:12337475-12337494 | MS.gene96967:intron | 65.0% |
| ! | GCTGTGCAGTCGGAGGCGTA+GGG | - | chr7.4:12336116-12336135 | MS.gene96967:CDS | 65.0% |
| ! | GTTGGTTCCGGTAGCGGTGG+AGG | - | chr7.4:12337286-12337305 | MS.gene96967:intron | 65.0% |
| ! | TGCTGTGCAGTCGGAGGCGT+AGG | - | chr7.4:12336115-12336134 | MS.gene96967:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 12335424 | 12338794 | 12335424 | ID=MS.gene96967 |
| chr7.4 | mRNA | 12335424 | 12338794 | 12335424 | ID=MS.gene96967.t1;Parent=MS.gene96967 |
| chr7.4 | exon | 12338588 | 12338794 | 12338588 | ID=MS.gene96967.t1.exon1;Parent=MS.gene96967.t1 |
| chr7.4 | CDS | 12338588 | 12338794 | 12338588 | ID=cds.MS.gene96967.t1;Parent=MS.gene96967.t1 |
| chr7.4 | exon | 12337558 | 12337836 | 12337558 | ID=MS.gene96967.t1.exon2;Parent=MS.gene96967.t1 |
| chr7.4 | CDS | 12337558 | 12337836 | 12337558 | ID=cds.MS.gene96967.t1;Parent=MS.gene96967.t1 |
| chr7.4 | exon | 12335424 | 12337151 | 12335424 | ID=MS.gene96967.t1.exon3;Parent=MS.gene96967.t1 |
| chr7.4 | CDS | 12335424 | 12337151 | 12335424 | ID=cds.MS.gene96967.t1;Parent=MS.gene96967.t1 |
| Gene Sequence |
| Protein sequence |
