AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene97737

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene97737.t1 MTR_5g029320 98.254 802 13 1 1 802 1 801 0.0 1645
MS.gene97737.t1 MTR_6g477820 47.490 737 364 13 61 783 1 728 0.0 664
MS.gene97737.t1 MTR_2g088470 44.158 736 358 14 57 779 37 732 0.0 619
MS.gene97737.t1 MTR_4g047800 44.795 730 359 14 62 779 32 729 0.0 613
MS.gene97737.t1 MTR_8g432540 43.641 747 393 17 49 782 79 810 0.0 613
MS.gene97737.t1 MTR_7g076080 44.033 729 369 16 66 779 70 774 0.0 603
MS.gene97737.t1 MTR_1g101280 41.351 740 404 15 57 779 24 750 0.0 570
MS.gene97737.t1 MTR_0198s0030 41.791 737 396 17 63 779 28 751 7.82e-177 527
MS.gene97737.t1 MTR_7g427710 42.210 706 310 20 89 779 16 638 9.29e-172 510
MS.gene97737.t1 MTR_2g101720 37.877 697 373 11 93 779 143 789 5.76e-160 484
MS.gene97737.t1 MTR_5g005600 35.972 720 417 17 71 779 30 716 5.08e-135 417
MS.gene97737.t1 MTR_2g030570 33.065 744 430 20 61 782 1 698 1.92e-125 392
MS.gene97737.t1 MTR_2g030600 32.710 749 419 24 61 782 1 691 2.23e-116 368
MS.gene97737.t1 MTR_2g030660 34.985 646 351 22 73 705 2 591 4.32e-104 335
MS.gene97737.t1 MTR_7g427690 44.529 393 192 8 265 650 43 416 4.59e-103 325
MS.gene97737.t1 MTR_7g427700 38.994 318 134 5 89 400 16 279 4.03e-65 224
MS.gene97737.t1 MTR_7g427700 39.752 161 87 3 619 779 281 431 1.58e-23 104
MS.gene97737.t1 MTR_2g083350 29.868 529 315 14 288 779 22 531 1.03e-59 212
MS.gene97737.t1 MTR_2g083330 31.306 444 278 9 341 779 104 525 3.17e-58 208
MS.gene97737.t1 MTR_0653s0020 46.032 189 88 3 465 652 1 176 1.28e-50 176
MS.gene97737.t1 MTR_5g046040 46.875 160 83 2 88 246 32 190 1.57e-37 145
MS.gene97737.t1 MTR_7g027265 52.101 119 56 1 91 209 19 136 4.22e-36 133
MS.gene97737.t1 MTR_2g030690 35.556 225 134 7 488 705 1 221 6.20e-32 126
MS.gene97737.t1 MTR_7g027605 50.000 94 43 4 370 462 1 91 8.14e-20 85.1
MS.gene97737.t1 MTR_2g451350 33.577 137 79 3 295 425 1 131 9.20e-20 86.7
MS.gene97737.t1 MTR_6g027290 26.829 164 111 1 65 228 10 164 3.77e-18 83.2
MS.gene97737.t1 MTR_1g105420 33.333 201 99 9 144 332 1 178 1.80e-15 76.6
MS.gene97737.t1 MTR_7g427670 38.144 97 48 1 143 239 32 116 2.57e-14 70.5
MS.gene97737.t1 MTR_0653s0010 39.167 120 66 2 660 779 2 114 7.25e-14 69.3
MS.gene97737.t1 MTR_4g100550 34.351 131 85 1 48 177 75 205 1.51e-13 72.4
MS.gene97737.t1 MTR_4g058970 34.694 98 56 2 92 181 28 125 3.28e-11 67.4
MS.gene97737.t1 MTR_7g103340 36.735 98 59 1 90 184 61 158 3.42e-11 64.3
MS.gene97737.t1 MTR_2g451350 43.103 58 33 0 368 425 35 92 3.61e-11 60.8
MS.gene97737.t1 MTR_7g093430 31.496 127 84 1 65 188 130 256 6.88e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene97737.t1 AT5G46880 55.276 834 289 22 8 782 1 809 0.0 842
MS.gene97737.t1 AT5G46880 55.276 834 289 22 8 782 1 809 0.0 842
MS.gene97737.t1 AT5G46880 55.276 834 289 22 8 782 1 809 0.0 842
MS.gene97737.t1 AT4G17710 48.276 783 312 16 13 785 10 709 0.0 665
MS.gene97737.t1 AT4G04890 44.052 765 389 13 34 790 7 740 0.0 647
MS.gene97737.t1 AT4G04890 44.052 765 389 13 34 790 7 740 0.0 647
MS.gene97737.t1 AT1G05230 44.804 741 352 16 51 783 29 720 0.0 631
MS.gene97737.t1 AT1G05230 44.804 741 352 16 51 783 29 720 0.0 631
MS.gene97737.t1 AT1G05230 44.804 741 352 16 51 783 29 720 0.0 631
MS.gene97737.t1 AT1G05230 44.804 741 352 16 51 783 29 720 0.0 631
MS.gene97737.t1 AT1G05230 44.804 741 352 16 51 783 29 720 0.0 631
MS.gene97737.t1 AT1G05230 44.804 741 352 16 51 783 29 720 0.0 631
MS.gene97737.t1 AT1G05230 44.804 741 352 16 51 783 29 720 0.0 631
MS.gene97737.t1 AT1G05230 44.804 741 352 16 51 783 29 720 0.0 631
MS.gene97737.t1 AT1G05230 44.804 741 352 16 51 783 29 720 0.0 631
MS.gene97737.t1 AT1G05230 44.804 741 352 16 51 783 29 720 0.0 631
MS.gene97737.t1 AT1G05230 44.534 741 352 16 51 783 29 718 0.0 627
MS.gene97737.t1 AT4G21750 43.101 761 377 14 55 780 19 758 0.0 618
MS.gene97737.t1 AT4G21750 43.101 761 377 14 55 780 19 758 0.0 618
MS.gene97737.t1 AT4G21750 43.101 761 377 14 55 780 19 758 0.0 618
MS.gene97737.t1 AT4G21750 43.101 761 377 14 55 780 19 758 0.0 618
MS.gene97737.t1 AT1G73360 46.479 710 341 15 89 783 32 717 0.0 601
MS.gene97737.t1 AT1G17920 44.766 726 338 18 75 783 7 686 0.0 581
MS.gene97737.t1 AT1G17920 44.766 726 338 18 75 783 7 686 0.0 581
MS.gene97737.t1 AT4G00730 43.306 732 379 18 55 782 103 802 0.0 576
MS.gene97737.t1 AT3G61150 40.533 750 391 18 63 783 85 808 0.0 555
MS.gene97737.t1 AT1G05230 46.634 609 285 13 51 651 29 605 0.0 546
MS.gene97737.t1 AT2G32370 38.429 713 381 15 75 776 52 717 1.77e-156 473
MS.gene97737.t1 AT5G52170 39.187 689 346 17 93 779 61 678 1.84e-156 472
MS.gene97737.t1 AT5G52170 39.187 689 346 17 93 779 61 678 1.84e-156 472
MS.gene97737.t1 AT5G52170 38.929 691 350 17 93 779 61 683 2.69e-156 472
MS.gene97737.t1 AT1G79840 37.500 704 365 16 89 779 43 684 9.85e-149 452
MS.gene97737.t1 AT1G79840 37.500 704 365 16 89 779 43 684 9.85e-149 452
MS.gene97737.t1 AT1G79840 37.500 704 365 16 89 779 101 742 2.88e-148 453
MS.gene97737.t1 AT1G79840 37.500 704 365 16 89 779 130 771 2.51e-147 451
MS.gene97737.t1 AT3G03260 35.397 743 407 18 61 779 1 694 3.40e-138 425
MS.gene97737.t1 AT4G00730 46.809 470 231 11 55 524 103 553 6.37e-137 417
MS.gene97737.t1 AT5G17320 33.827 742 425 18 72 779 6 715 1.15e-125 393
MS.gene97737.t1 AT1G79840 38.272 567 293 13 89 645 101 620 4.75e-122 381
MS.gene97737.t1 AT1G34650 34.247 730 410 24 84 779 12 705 1.95e-113 361
MS.gene97737.t1 AT4G25530 31.497 708 415 13 83 779 34 682 5.50e-113 359
MS.gene97737.t1 AT3G03260 36.731 569 319 13 61 618 1 539 3.80e-112 352
MS.gene97737.t1 AT1G79840 39.229 441 216 10 89 523 101 495 8.62e-93 301
MS.gene97737.t1 AT5G07260 25.632 593 350 19 154 736 9 520 1.96e-40 157
MS.gene97737.t1 AT5G07260 25.464 593 346 20 154 736 9 515 5.81e-40 155
MS.gene97737.t1 AT5G60690 35.714 98 55 2 92 181 25 122 1.82e-11 68.6
MS.gene97737.t1 AT4G26920 24.569 232 154 10 297 523 74 289 4.78e-11 66.2

Find 184 sgRNAs with CRISPR-Local

Find 363 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTATACGCTTCCATTTCT+TGG 0.178284 5.1:-19877996 None:intergenic
AGAGGACCTCCTGCAGTATT+TGG 0.188290 5.1:-19882227 None:intergenic
TTCAGTCTTTGTTTATCATC+TGG 0.234084 5.1:-19878347 None:intergenic
ATGTATAATGGGACCTGATA+TGG 0.242844 5.1:+19879493 MS.gene97737:CDS
AGAGGGTGGTCTCTTATTAA+TGG 0.264546 5.1:+19880646 MS.gene97737:CDS
ATTATAGCTTCAGGTGCTTC+TGG 0.293148 5.1:+19881088 MS.gene97737:CDS
CAGATGGATGCACTTTCTAA+TGG 0.294055 5.1:+19883063 MS.gene97737:intron
ATCAAGCTCTTTCGCGCTTC+CGG 0.296499 5.1:-19882643 None:intergenic
CATAGTTACTAAATATTTGA+TGG 0.305082 5.1:-19882424 None:intergenic
GAGAGGTAAAGAAGAGATAA+TGG 0.313794 5.1:+19877855 MS.gene97737:CDS
ACTAACAACAATTGCTTTGT+TGG 0.313986 5.1:+19883647 MS.gene97737:CDS
GGAACTTGCAGCTTCTTCTA+TGG 0.317436 5.1:+19880691 MS.gene97737:CDS
CACCACAAGTGGTCATATTA+AGG 0.319412 5.1:-19882699 None:intergenic
ACTGAAACTAAGCCATGATT+TGG 0.329620 5.1:+19878364 MS.gene97737:CDS
GCTTGATGAAATTAGCAAAT+AGG 0.352169 5.1:+19882659 MS.gene97737:CDS
TTGTGGTGGGCCATGTATAA+TGG 0.362098 5.1:+19879481 MS.gene97737:CDS
CTCAGGTTGTCTTCTTATCA+TGG 0.367340 5.1:+19883505 MS.gene97737:CDS
TTCGGAACGGTGAGAATGAT+AGG 0.389842 5.1:+19880756 MS.gene97737:CDS
ATACATGGCCCACCACAATT+AGG 0.390584 5.1:-19879476 None:intergenic
ATAATGGATCAAAGTGGTTC+AGG 0.391002 5.1:+19877871 MS.gene97737:CDS
TCAGTCTTTGTTTATCATCT+GGG 0.391749 5.1:-19878346 None:intergenic
AGATGGATGCACTTTCTAAT+GGG 0.399022 5.1:+19883064 MS.gene97737:intron
ACTGTTCAAATTATAGCTTC+AGG 0.399428 5.1:+19881079 MS.gene97737:CDS
CTCTTTCGCGCTTCCGGAGA+AGG 0.400542 5.1:-19882637 None:intergenic
TGAATGAACCACTTTGGATT+CGG 0.402354 5.1:+19880738 MS.gene97737:CDS
GACAAGGTGTGCACACTACT+TGG 0.407874 5.1:-19883702 None:intergenic
GTGATTCTAACGGTGTCTTC+TGG 0.415111 5.1:-19882751 None:intergenic
CTTGCCCTAGCAACAATTGT+TGG 0.420980 5.1:-19881055 None:intergenic
AATTATATGCAGTTTGTTCA+AGG 0.423365 5.1:+19878313 MS.gene97737:intron
GAGGACCTCCTGCAGTATTT+GGG 0.423473 5.1:-19882226 None:intergenic
ATCACTCCACTGGGTTGGCC+AGG 0.423809 5.1:-19882793 None:intergenic
ATCTCTTATGCCACCATCAC+TGG 0.427634 5.1:+19880523 MS.gene97737:CDS
TCTTGAAAATGTGAAGGTTC+AGG 0.429683 5.1:-19880626 None:intergenic
TGTACCCTTGAATAGCCATT+TGG 0.431448 5.1:-19882271 None:intergenic
TTACTAAATATTTGATGGAC+AGG 0.433796 5.1:-19882419 None:intergenic
CACTACGGTCGACGTTGATT+CGG 0.435097 5.1:+19883328 MS.gene97737:CDS
TATTGCTAACGGATCACATC+CGG 0.435149 5.1:+19883110 MS.gene97737:CDS
ATTTCAGTGCATGGTGGCAT+TGG 0.436320 5.1:-19880581 None:intergenic
TTTGGTGCACAACGTTGGTT+AGG 0.436385 5.1:+19882464 MS.gene97737:CDS
AGAAGGGAAATGCAGTTTCC+CGG 0.438847 5.1:-19883129 None:intergenic
AAGACTTTGGTATGAGGATA+AGG 0.441439 5.1:-19882844 None:intergenic
TGATCATCAAAGCCCATATC+AGG 0.443548 5.1:-19879506 None:intergenic
TCAACCCTTTCCTTCTTCCA+TGG 0.443578 5.1:+19877713 MS.gene97737:CDS
TGCTCGTCAGATCCAAGAAA+TGG 0.444102 5.1:+19877984 MS.gene97737:CDS
GATTGCAGTGATACCTTCTC+CGG 0.445102 5.1:+19882624 MS.gene97737:intron
TTTAGTAACTATGTGTATAG+TGG 0.445206 5.1:+19882434 MS.gene97737:CDS
TTTGAACAGAAAGAAGAAGA+AGG 0.446907 5.1:+19877826 MS.gene97737:intron
GTTTGAAGAATGAGAACTAT+AGG 0.449425 5.1:+19879423 MS.gene97737:CDS
AACCTACATTTATGCGAAGA+AGG 0.449464 5.1:-19883146 None:intergenic
TTAAGCAAAGGAATGAGTTA+AGG 0.450292 5.1:+19880831 MS.gene97737:CDS
GCTAGAAACATATCAGATCT+TGG 0.453635 5.1:+19882527 MS.gene97737:CDS
ATGATGGTGGTGCCATTGTT+TGG 0.453959 5.1:-19880502 None:intergenic
ACAATCATGGACTGCTATAT+CGG 0.455597 5.1:+19882723 MS.gene97737:CDS
TTCCTTTGCTTAAGATTCAA+AGG 0.462942 5.1:-19880821 None:intergenic
AAATACTGCAGGAGGTCCTC+TGG 0.464331 5.1:+19882229 MS.gene97737:CDS
TGTGGTGGGCCATGTATAAT+GGG 0.465808 5.1:+19879482 MS.gene97737:CDS
CTGAAACTAAGCCATGATTT+GGG 0.466763 5.1:+19878365 MS.gene97737:CDS
GAACAAGTTGAAGATAAGTC+AGG 0.474547 5.1:+19877898 MS.gene97737:CDS
AATACCCTGCATCAAATTGA+AGG 0.477806 5.1:+19883608 MS.gene97737:CDS
AACCACGCCAGGTTAAGTTC+TGG 0.478239 5.1:+19878393 MS.gene97737:CDS
GTGGTTTCAGTCCCAAATCA+TGG 0.480470 5.1:-19878376 None:intergenic
TGACGAACGCCACAGATCTC+AGG 0.483891 5.1:+19882879 MS.gene97737:CDS
GTTTCCAACAATTGTTGCTA+GGG 0.484748 5.1:+19881051 MS.gene97737:CDS
GAGCACCTTCAATTTGATGC+AGG 0.487171 5.1:-19883613 None:intergenic
TATTATGTATGCAGGTAACA+TGG 0.487587 5.1:+19882369 MS.gene97737:intron
TGTATAATGGGACCTGATAT+GGG 0.487914 5.1:+19879494 MS.gene97737:CDS
TGTTTCCAACAATTGTTGCT+AGG 0.491835 5.1:+19881050 MS.gene97737:CDS
ACATGCCAAATGGCTATTCA+AGG 0.495938 5.1:+19882266 MS.gene97737:CDS
CTTTGTTTATCATCTGGGTG+TGG 0.497200 5.1:-19878341 None:intergenic
GAGAGTTGCACAGATCAATC+TGG 0.500290 5.1:+19883290 MS.gene97737:CDS
GAAGAAGGAAAGGGTTGAAA+AGG 0.502627 5.1:-19877708 None:intergenic
TTGGAAGGTGCACTAGTGGT+TGG 0.505086 5.1:-19883683 None:intergenic
TCGCCGCAGTTTCAACCACT+TGG 0.506037 5.1:+19882818 MS.gene97737:CDS
GTGTATAGTGGAATGGCATT+TGG 0.507399 5.1:+19882446 MS.gene97737:CDS
ATTCCAAGTTCTTTCTCCGT+TGG 0.508575 5.1:+19882087 MS.gene97737:CDS
TGAAGTTGAAGCTAGAGTTA+TGG 0.509313 5.1:-19877674 None:intergenic
TGCGGCGAGAATCACTCCAC+TGG 0.516058 5.1:-19882803 None:intergenic
GTCAAATGAATGAACCACTT+TGG 0.516637 5.1:+19880732 MS.gene97737:CDS
TATTACCATGGAAGAAGGAA+AGG 0.517256 5.1:-19877718 None:intergenic
GGTGCTTCTGGCCATGCAAG+TGG 0.520606 5.1:+19881100 MS.gene97737:CDS
TGTCAAGTAATGTCAACAAT+GGG 0.522321 5.1:+19877606 MS.gene97737:CDS
CCACTTGTGGTGGACAATCA+TGG 0.523426 5.1:+19882710 MS.gene97737:CDS
GAAGGTTCAGGTGGTAACAT+AGG 0.523574 5.1:-19880614 None:intergenic
ATACCAACGGAGAAAGAACT+TGG 0.527798 5.1:-19882090 None:intergenic
ACAACCTGAGTTAGCAGCAT+TGG 0.530947 5.1:-19883492 None:intergenic
TGCAAGTGGGACTCTTCAGC+TGG 0.531576 5.1:+19881114 MS.gene97737:CDS
TCAGGTTGTCTTCTTATCAT+GGG 0.533492 5.1:+19883506 MS.gene97737:CDS
CTTGTCCACTCATAGCTAGT+TGG 0.533968 5.1:-19883352 None:intergenic
ACTAGGAAAATCACTGAGCC+TGG 0.535391 5.1:+19882775 MS.gene97737:CDS
AGGAAAATCAACAATGGCCC+AGG 0.539512 5.1:-19882167 None:intergenic
GGCATTGGATCAAAGTGCCT+TGG 0.540308 5.1:-19880566 None:intergenic
AGATCAAAGACTTTGGTATG+AGG 0.540751 5.1:-19882850 None:intergenic
GGCCTTTGAATCTTAAGCAA+AGG 0.541375 5.1:+19880819 MS.gene97737:CDS
AAAATGTCGAGGAAGGAACC+TGG 0.542609 5.1:+19882149 MS.gene97737:CDS
TCAGGTGGTAACATAGGGAC+AGG 0.544013 5.1:-19880608 None:intergenic
TGAGAACTATAGGCTACAAT+CGG 0.544698 5.1:+19879433 MS.gene97737:CDS
TCATCTGAACAAGGTGTCAC+AGG 0.545128 5.1:+19883446 MS.gene97737:CDS
AACTTCGATTTGAAAATGCC+CGG 0.545308 5.1:+19879531 MS.gene97737:CDS
GTCATTCAAGACATGCCAAA+TGG 0.545833 5.1:+19882256 MS.gene97737:CDS
AGCCTTAATATGACCACTTG+TGG 0.546867 5.1:+19882697 MS.gene97737:CDS
ATTCTTATCCCAAATACTGC+AGG 0.549196 5.1:+19882218 MS.gene97737:CDS
TGGGAACTCATTAAATGAAG+TGG 0.552199 5.1:+19883083 MS.gene97737:CDS
AAGGTTCAGGTGGTAACATA+GGG 0.552742 5.1:-19880613 None:intergenic
TTTGGGACTGAAACCACGCC+AGG 0.553427 5.1:+19878382 MS.gene97737:CDS
TAACTATGTGTATAGTGGAA+TGG 0.553607 5.1:+19882439 MS.gene97737:CDS
TTTCCTAGTTGTGATTCTAA+CGG 0.554507 5.1:-19882761 None:intergenic
ACGAAGGAGATCAAAGACTT+TGG 0.555409 5.1:-19882857 None:intergenic
GAAGAAGAAGGAATATTGAG+AGG 0.555846 5.1:+19877838 MS.gene97737:CDS
TTTGCAGAGGCAATGTGAAA+GGG 0.557444 5.1:+19882490 MS.gene97737:CDS
AGGATTCATGATAGTGCCAA+TGG 0.558823 5.1:+19883403 MS.gene97737:CDS
AGCACCTTCAATTTGATGCA+GGG 0.561062 5.1:-19883612 None:intergenic
TCAGCATTTGATGAAACCAT+TGG 0.561093 5.1:-19883419 None:intergenic
ACCTACATTTATGCGAAGAA+GGG 0.563662 5.1:-19883145 None:intergenic
GATGCAGGGTATTGCAGAGG+TGG 0.564128 5.1:-19883598 None:intergenic
GTGCTTCTGGCCATGCAAGT+GGG 0.568255 5.1:+19881101 MS.gene97737:CDS
GAAGTGGCTCATATTGCTAA+CGG 0.568936 5.1:+19883099 MS.gene97737:CDS
ATTGCTAACGGATCACATCC+GGG 0.570408 5.1:+19883111 MS.gene97737:CDS
GAAAGGTTAAGCTTTGCAGA+AGG 0.572294 5.1:-19883554 None:intergenic
AGGAAAGGGTTGAAAAGGCA+TGG 0.572972 5.1:-19877703 None:intergenic
CAAGTAATGTCAACAATGGG+AGG 0.574313 5.1:+19877609 MS.gene97737:CDS
AGTGCCAATGCTGCTAACTC+AGG 0.574318 5.1:+19883488 MS.gene97737:CDS
AAGAAAATGAGTCTCTCTAG+TGG 0.575091 5.1:-19882113 None:intergenic
ACAGGAATCATTTCAGTGCA+TGG 0.575428 5.1:-19880590 None:intergenic
CGAGAATCACTCCACTGGGT+TGG 0.576021 5.1:-19882798 None:intergenic
AACCAGAACTTAACCTGGCG+TGG 0.579376 5.1:-19878395 None:intergenic
ATTACCATGGAAGAAGGAAA+GGG 0.585294 5.1:-19877717 None:intergenic
GCTGAAGAGTCCCACTTGCA+TGG 0.585312 5.1:-19881111 None:intergenic
GAATCGTCGAACTCAGATGA+AGG 0.585722 5.1:+19878421 MS.gene97737:CDS
TTGTCAAGTAATGTCAACAA+TGG 0.587069 5.1:+19877605 MS.gene97737:CDS
ATATCAGGTCCCATTATACA+TGG 0.589693 5.1:-19879491 None:intergenic
GGTGGTGCCATTGTTTGGAG+TGG 0.590059 5.1:-19880497 None:intergenic
CCATGATTGTCCACCACAAG+TGG 0.590603 5.1:-19882710 None:intergenic
TGAAAGGGTTGCAAGCCTCA+TGG 0.593187 5.1:+19882505 MS.gene97737:CDS
CTACTTGGAAGGTGCACTAG+TGG 0.594559 5.1:-19883687 None:intergenic
ATTATGTATGCAGGTAACAT+GGG 0.594985 5.1:+19882370 MS.gene97737:intron
TAGACATGAACATTTATCCA+AGG 0.595721 5.1:+19880549 MS.gene97737:CDS
ATCTGTGGCGTTCGTCACGA+AGG 0.596909 5.1:-19882873 None:intergenic
AGGTGTGCACACTACTTGGA+AGG 0.599412 5.1:-19883698 None:intergenic
ATGTCTAAGTCCAGTGATGG+TGG 0.600221 5.1:-19880533 None:intergenic
TGCATTGCACTTCTTCCACA+AGG 0.603600 5.1:+19883383 MS.gene97737:CDS
AAATGCCCGGTTAAAAGAAG+AGG 0.603680 5.1:+19879544 MS.gene97737:CDS
TCGGAACGGTGAGAATGATA+GGG 0.604296 5.1:+19880757 MS.gene97737:CDS
GATGGTGGCATAAGAGATGA+TGG 0.607106 5.1:-19880518 None:intergenic
GGAAGAAGTGCAATGCATGA+AGG 0.611914 5.1:-19883377 None:intergenic
TGATTGCTGTGACACTTGAA+AGG 0.612049 5.1:-19883571 None:intergenic
CTTAATATGACCACTTGTGG+TGG 0.613209 5.1:+19882700 MS.gene97737:CDS
AAGTAATGTCAACAATGGGA+GGG 0.615730 5.1:+19877610 MS.gene97737:CDS
GGCACTATCATGAATCCTTG+TGG 0.616066 5.1:-19883398 None:intergenic
GAAGAAGTGCAATGCATGAA+GGG 0.616666 5.1:-19883376 None:intergenic
TGTCAGCAAAATGTCGAGGA+AGG 0.616984 5.1:+19882142 MS.gene97737:CDS
TGGCATTTGGTGCACAACGT+TGG 0.617325 5.1:+19882459 MS.gene97737:CDS
CTTATCCCAAATACTGCAGG+AGG 0.618005 5.1:+19882221 MS.gene97737:CDS
CATGCCAAATGGCTATTCAA+GGG 0.621111 5.1:+19882267 MS.gene97737:CDS
TCACCGTTCCGAATCCAAAG+TGG 0.624552 5.1:-19880746 None:intergenic
TAAGTCAGGAAATGAACAAG+AGG 0.625074 5.1:+19877912 MS.gene97737:CDS
GAACCACTTTGGATTCGGAA+CGG 0.626408 5.1:+19880743 MS.gene97737:CDS
TTGAAGCTAGAGTTATGGAT+CGG 0.627481 5.1:-19877669 None:intergenic
TCTGAAACCAGAACTTAACC+TGG 0.629926 5.1:-19878400 None:intergenic
TGAAAATGTGAAGGTTCAGG+TGG 0.630308 5.1:-19880623 None:intergenic
TGGTCGTCCACTCCAAACAA+TGG 0.632170 5.1:+19880490 MS.gene97737:CDS
GCGGCGAGAATCACTCCACT+GGG 0.633627 5.1:-19882802 None:intergenic
CCACCCTCTTGAAAATGTGA+AGG 0.635356 5.1:-19880632 None:intergenic
AAATGTCGAGGAAGGAACCT+GGG 0.637514 5.1:+19882150 MS.gene97737:CDS
CTGATATGTTTCTAGCCATG+AGG 0.641439 5.1:-19882520 None:intergenic
AGAAACATATCAGATCTTGG+AGG 0.641979 5.1:+19882530 MS.gene97737:CDS
TTTGATGCAGGGTATTGCAG+AGG 0.646249 5.1:-19883601 None:intergenic
TCGGTCCAACTAGCTATGAG+TGG 0.646383 5.1:+19883347 MS.gene97737:CDS
TGCATAACATCAAGATACAC+TGG 0.647161 5.1:+19880470 MS.gene97737:CDS
ACACCGTTAGAATCACAACT+AGG 0.649395 5.1:+19882758 MS.gene97737:CDS
AAGCCAAGTGGTTGAAACTG+CGG 0.657898 5.1:-19882821 None:intergenic
ATCAACAGGAAAATCAACAA+TGG 0.660991 5.1:-19882173 None:intergenic
TTGGCACTAGTAGTTGATGA+TGG 0.661709 5.1:-19883473 None:intergenic
ACTGAGCCTGGCCAACCCAG+TGG 0.663353 5.1:+19882787 MS.gene97737:CDS
GAAGAGATAATGGATCAAAG+TGG 0.668091 5.1:+19877865 MS.gene97737:CDS
GTCTCTCTAGTGGATACCAA+CGG 0.670714 5.1:-19882103 None:intergenic
GCTGATACATCATCTGAACA+AGG 0.673597 5.1:+19883437 MS.gene97737:CDS
TTCATGTCTAAGTCCAGTGA+TGG 0.677862 5.1:-19880536 None:intergenic
GTCTTGAATGACACAGCCAG+AGG 0.687101 5.1:-19882245 None:intergenic
GTATTGTCAGCAAAATGTCG+AGG 0.698206 5.1:+19882138 MS.gene97737:CDS
TTTGTGGTACCTGAGATCTG+TGG 0.717584 5.1:-19882888 None:intergenic
GGAATCATTTCAGTGCATGG+TGG 0.718384 5.1:-19880587 None:intergenic
AAGCTTAGTAGTCTACACTA+CGG 0.725334 5.1:+19883313 MS.gene97737:CDS
ATGAGGATAAGGAAGCCAAG+TGG 0.750424 5.1:-19882833 None:intergenic
GGTGGCATAAGAGATGATGG+TGG 0.803191 5.1:-19880515 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATGTATAAAATAATAAG+TGG + chr5.1:19879895-19879914 MS.gene97737:intron 10.0%
!! AATAAAAATTATACAAAATG+AGG + chr5.1:19879979-19879998 MS.gene97737:intron 10.0%
!! TAAAATAAAATCAAGAATTT+AGG - chr5.1:19883038-19883057 None:intergenic 10.0%
!! TTAAAAGTCAAAAAAAATTT+CGG + chr5.1:19881600-19881619 MS.gene97737:intron 10.0%
!!! AAAAAGAATTATCAAAATTT+TGG - chr5.1:19881564-19881583 None:intergenic 10.0%
!!! AAAAATTGATTTTTTTTTGA+AGG + chr5.1:19881686-19881705 MS.gene97737:intron 10.0%
!!! AATTAAAACTGAAAAATTTT+CGG + chr5.1:19881637-19881656 MS.gene97737:intron 10.0%
!!! AGAAAAATATTTTATAGAAT+CGG + chr5.1:19882564-19882583 MS.gene97737:intron 10.0%
!!! ATTTTAATTAAAAATCATGT+TGG + chr5.1:19879625-19879644 MS.gene97737:intron 10.0%
!!! ATTTTATTTTATTTTACAGA+TGG + chr5.1:19883047-19883066 MS.gene97737:intron 10.0%
!!! TAATTTTTCATATAATATCA+TGG - chr5.1:19878133-19878152 None:intergenic 10.0%
!!! TTATATTTGACATTTTATTT+TGG + chr5.1:19882602-19882621 MS.gene97737:intron 10.0%
!!! TTTAATTGTTTACTAATTTT+GGG + chr5.1:19879325-19879344 MS.gene97737:intron 10.0%
!!! TTTTAATTGTTTACTAATTT+TGG + chr5.1:19879324-19879343 MS.gene97737:intron 10.0%
!! AAAAAATAGTATATGTTAAG+TGG + chr5.1:19879789-19879808 MS.gene97737:intron 15.0%
!! AAAAAATCGGAAAAAAAATT+CGG + chr5.1:19881661-19881680 MS.gene97737:intron 15.0%
!! AAAAAATGCATGATTTAATT+TGG + chr5.1:19880412-19880431 MS.gene97737:intron 15.0%
!! AAAACCATTAAAAAAAATTG+GGG + chr5.1:19879194-19879213 MS.gene97737:intron 15.0%
!! AAATAGTAAAAATATTACCA+TGG - chr5.1:19877733-19877752 None:intergenic 15.0%
!! AAGAAGATATTAAATGAATA+AGG + chr5.1:19878746-19878765 MS.gene97737:intron 15.0%
!! CAAAACCATTAAAAAAAATT+GGG + chr5.1:19879193-19879212 MS.gene97737:intron 15.0%
!! TCAAAACCATTAAAAAAAAT+TGG + chr5.1:19879192-19879211 MS.gene97737:intron 15.0%
!!! ATTAAAACTGAAAAATTTTC+GGG + chr5.1:19881638-19881657 MS.gene97737:intron 15.0%
!!! ATTGTTGTTGTTATTATTAT+AGG + chr5.1:19879352-19879371 MS.gene97737:intron 15.0%
!!! GAAAAATATTTTATAGAATC+GGG + chr5.1:19882565-19882584 MS.gene97737:intron 15.0%
!!! TAAACCCTAAATATATTTTA+AGG + chr5.1:19878252-19878271 MS.gene97737:intron 15.0%
!!! TAATTTTTTATTATGTATGC+AGG + chr5.1:19882361-19882380 MS.gene97737:intron 15.0%
!!! TCAATTGTATATTTTTAACA+AGG + chr5.1:19879840-19879859 MS.gene97737:intron 15.0%
!!! TCACTTTTTTTAACTTTTTT+TGG + chr5.1:19880110-19880129 MS.gene97737:intron 15.0%
!!! TGGAAAAAAATTTTTTTTGA+AGG - chr5.1:19881544-19881563 None:intergenic 15.0%
!!! TTAGCCTTAAAATATATTTA+GGG - chr5.1:19878259-19878278 None:intergenic 15.0%
!!! TTCTAAGAATAAATACTTAA+TGG - chr5.1:19879228-19879247 None:intergenic 15.0%
!!! TTTAGCCTTAAAATATATTT+AGG - chr5.1:19878260-19878279 None:intergenic 15.0%
!!! TTTTCATTTCATATAGTTAA+TGG + chr5.1:19879021-19879040 MS.gene97737:intron 15.0%
!! AAAAATCGGAAAAAAAATTC+GGG + chr5.1:19881662-19881681 MS.gene97737:intron 20.0%
!! AAAAATTATGACCTAACATA+TGG + chr5.1:19878145-19878164 MS.gene97737:intron 20.0%
!! AAACATATTTAAGCCTATAT+TGG + chr5.1:19881903-19881922 MS.gene97737:intron 20.0%
!! AAATATAAAACACATCACAA+AGG - chr5.1:19881990-19882009 None:intergenic 20.0%
!! AACAAAAAAAAAATAAGCCA+AGG + chr5.1:19881715-19881734 MS.gene97737:intron 20.0%
!! AAGGAAAAAAAAAATAAGCT+AGG - chr5.1:19881525-19881544 None:intergenic 20.0%
!! AATTATACAAAATGAGGTTA+AGG + chr5.1:19879985-19880004 MS.gene97737:intron 20.0%
!! ACAAAAAAAAAATAAGCCAA+GGG + chr5.1:19881716-19881735 MS.gene97737:intron 20.0%
!! ACAAACTAATAATTCCTAAA+AGG - chr5.1:19880028-19880047 None:intergenic 20.0%
!! ACAAATTCATTTATTCTTTG+TGG + chr5.1:19880206-19880225 MS.gene97737:intron 20.0%
!! AGAGTGTAATAAAAATATCT+AGG - chr5.1:19882305-19882324 None:intergenic 20.0%
!! AGGAAAAAAAAAATAAGCTA+GGG - chr5.1:19881524-19881543 None:intergenic 20.0%
!! CAAAATTCATAAGAAACAAA+TGG - chr5.1:19880988-19881007 None:intergenic 20.0%
!! CAAATTACAAAAAATGACAT+GGG + chr5.1:19881483-19881502 MS.gene97737:intron 20.0%
!! CATAGTTACTAAATATTTGA+TGG - chr5.1:19882427-19882446 None:intergenic 20.0%
!! GAATTATTCTTCAAAACATT+AGG + chr5.1:19882334-19882353 MS.gene97737:intron 20.0%
!! GTAACATTTATTTATTGTCT+TGG + chr5.1:19878807-19878826 MS.gene97737:intron 20.0%
!! TAAATAACTAAGGGTAATAA+TGG - chr5.1:19878704-19878723 None:intergenic 20.0%
!! TATTATTGTTTAGTACTCTA+CGG + chr5.1:19879256-19879275 MS.gene97737:intron 20.0%
!! TCAAAATGTGACAATTAAAA+AGG + chr5.1:19878843-19878862 MS.gene97737:intron 20.0%
!! TCAAATTACAAAAAATGACA+TGG + chr5.1:19881482-19881501 MS.gene97737:intron 20.0%
!! TGGAAATAAATTAAAAGAGA+AGG - chr5.1:19880968-19880987 None:intergenic 20.0%
!! TTAAAGTGAAGAATTTACAT+AGG - chr5.1:19879702-19879721 None:intergenic 20.0%
!! TTAAATGAATAAGGTCATTA+TGG + chr5.1:19878755-19878774 MS.gene97737:intron 20.0%
!! TTCATATAGTTAATGGTTAT+TGG + chr5.1:19879028-19879047 MS.gene97737:intron 20.0%
!! TTCTTATACTATTAGAGATT+AGG - chr5.1:19880393-19880412 None:intergenic 20.0%
!!! AAAAATTTTCGGGAAAAAAT+CGG + chr5.1:19881648-19881667 MS.gene97737:intron 20.0%
!!! AAGAATTTTGAAAGTTTTGT+TGG - chr5.1:19882204-19882223 None:intergenic 20.0%
!!! AAGTCATATTTTTTGACAAT+AGG + chr5.1:19879928-19879947 MS.gene97737:intron 20.0%
!!! AATATTTTATGTCCTAATTG+TGG + chr5.1:19879464-19879483 MS.gene97737:CDS 20.0%
!!! AATTCTTCACTTTAAGAATA+TGG + chr5.1:19879707-19879726 MS.gene97737:intron 20.0%
!!! TGTAACTTTTTTCTTCATTT+TGG + chr5.1:19877795-19877814 MS.gene97737:intron 20.0%
! AAAAATATTACCATGGAAGA+AGG - chr5.1:19877726-19877745 None:intergenic 25.0%
! AACAAACATCTATTACTACT+AGG + chr5.1:19878972-19878991 MS.gene97737:intron 25.0%
! AAGAAGAATAAACGTCTTAA+TGG - chr5.1:19878498-19878517 None:intergenic 25.0%
! AGTGACAGTTTATTATTGAA+GGG + chr5.1:19880274-19880293 MS.gene97737:intron 25.0%
! ATGTATACCAATGATAAGAT+AGG + chr5.1:19881241-19881260 MS.gene97737:intron 25.0%
! ATGTGACAATTAAAAAGGAA+CGG + chr5.1:19878848-19878867 MS.gene97737:intron 25.0%
! GCTATATATCATCATTACTA+GGG + chr5.1:19879143-19879162 MS.gene97737:intron 25.0%
! GGAAAAAAAAAATAAGCTAG+GGG - chr5.1:19881523-19881542 None:intergenic 25.0%
! TAGTGACAGTTTATTATTGA+AGG + chr5.1:19880273-19880292 MS.gene97737:intron 25.0%
! TCTCCACAATAAATAACTAA+GGG - chr5.1:19878713-19878732 None:intergenic 25.0%
! TGCTATATATCATCATTACT+AGG + chr5.1:19879142-19879161 MS.gene97737:intron 25.0%
! TTAACTGATTAAACTTTGCA+GGG + chr5.1:19881815-19881834 MS.gene97737:intron 25.0%
! TTAACTGATTAAACTTTGCA+GGG - chr5.1:19881834-19881815 None:intergenic 25.0%
! TTACCCTTAGTTATTTATTG+TGG + chr5.1:19878707-19878726 MS.gene97737:intron 25.0%
! TTTAACTGATTAAACTTTGC+AGG + chr5.1:19881814-19881833 MS.gene97737:intron 25.0%
! TTTAACTGATTAAACTTTGC+AGG - chr5.1:19881833-19881814 None:intergenic 25.0%
! TTTAGTAACTATGTGTATAG+TGG + chr5.1:19882434-19882453 MS.gene97737:CDS 25.0%
!! AATTATATGCAGTTTGTTCA+AGG + chr5.1:19878313-19878332 MS.gene97737:intron 25.0%
!! TAAATACCTCTTCTTTTAAC+CGG - chr5.1:19879553-19879572 None:intergenic 25.0%
!! TCAAATAAATTGATTAGCCA+CGG + chr5.1:19880352-19880371 MS.gene97737:intron 25.0%
!! TTAAGGCAAAATCTAAAATG+AGG + chr5.1:19880002-19880021 MS.gene97737:intron 25.0%
!! TTACTAAATATTTGATGGAC+AGG - chr5.1:19882422-19882441 None:intergenic 25.0%
!!! AGTACCCCAATTTTTTTTAA+TGG - chr5.1:19879201-19879220 None:intergenic 25.0%
!!! ATAACCAAGGTTTTAAATTG+CGG + chr5.1:19878090-19878109 MS.gene97737:intron 25.0%
!!! TTTTTTGTAATTTGATGACG+TGG - chr5.1:19881477-19881496 None:intergenic 25.0%
AAGACTTTGTACAACAGTTT+AGG - chr5.1:19878578-19878597 None:intergenic 30.0%
AATTCATACAGTGATAACCA+AGG + chr5.1:19878077-19878096 MS.gene97737:intron 30.0%
ACTAACAACAATTGCTTTGT+TGG + chr5.1:19883647-19883666 MS.gene97737:CDS 30.0%
ACTGTTCAAATTATAGCTTC+AGG + chr5.1:19881079-19881098 MS.gene97737:CDS 30.0%
ACTTAGACCTATCTTATCAT+TGG - chr5.1:19881251-19881270 None:intergenic 30.0%
ACTTTAATATCTTGATGTCG+CGG + chr5.1:19882972-19882991 MS.gene97737:intron 30.0%
AGACTTTGTACAACAGTTTA+GGG - chr5.1:19878577-19878596 None:intergenic 30.0%
ATCAACAGGAAAATCAACAA+TGG - chr5.1:19882176-19882195 None:intergenic 30.0%
ATTATGTATGCAGGTAACAT+GGG + chr5.1:19882370-19882389 MS.gene97737:intron 30.0%
CAAATTACCAAAAATGGCAT+GGG - chr5.1:19881756-19881775 None:intergenic 30.0%
CAATAAATATGAGTAGCGTT+TGG - chr5.1:19879124-19879143 None:intergenic 30.0%
CGTCATCAAATTACCAAAAA+TGG - chr5.1:19881762-19881781 None:intergenic 30.0%
CTCTACGGTTGATTAATTAT+TGG + chr5.1:19879271-19879290 MS.gene97737:intron 30.0%
CTCTCCACAATAAATAACTA+AGG - chr5.1:19878714-19878733 None:intergenic 30.0%
GACAATGTAAACACCAATAT+AGG - chr5.1:19881919-19881938 None:intergenic 30.0%
GACACTTAAAAAGAAACAGA+GGG - chr5.1:19878608-19878627 None:intergenic 30.0%
GCTTGATGAAATTAGCAAAT+AGG + chr5.1:19882659-19882678 MS.gene97737:CDS 30.0%
GGTTAAATGCGTTACATTAA+TGG - chr5.1:19879081-19879100 None:intergenic 30.0%
GTTTGAAGAATGAGAACTAT+AGG + chr5.1:19879423-19879442 MS.gene97737:CDS 30.0%
TAACTGATTAAACTTTGCAG+GGG + chr5.1:19881816-19881835 MS.gene97737:intron 30.0%
TAACTGATTAAACTTTGCAG+GGG - chr5.1:19881835-19881816 None:intergenic 30.0%
TAAGCCACCAATATATAACT+AGG - chr5.1:19881327-19881346 None:intergenic 30.0%
TACTATTAGAGATTAGGTCA+TGG - chr5.1:19880387-19880406 None:intergenic 30.0%
TAGACATGAACATTTATCCA+AGG + chr5.1:19880549-19880568 MS.gene97737:CDS 30.0%
TATTATACGCTTCCATTTCT+TGG - chr5.1:19877999-19878018 None:intergenic 30.0%
TATTATGTATGCAGGTAACA+TGG + chr5.1:19882369-19882388 MS.gene97737:intron 30.0%
TCAAATTACCAAAAATGGCA+TGG - chr5.1:19881757-19881776 None:intergenic 30.0%
TCAAGATATTAAAGTCACAC+CGG - chr5.1:19882967-19882986 None:intergenic 30.0%
TCACCATTCTTAAAATCACA+GGG + chr5.1:19882923-19882942 MS.gene97737:intron 30.0%
TCTAAGTATCCAATATGTGT+CGG + chr5.1:19881264-19881283 MS.gene97737:intron 30.0%
TCTTTACCTTGTAGCAAAAA+TGG + chr5.1:19881020-19881039 MS.gene97737:intron 30.0%
TGACACACCTAGTTATATAT+TGG + chr5.1:19881317-19881336 MS.gene97737:intron 30.0%
TGACACTTAAAAAGAAACAG+AGG - chr5.1:19878609-19878628 None:intergenic 30.0%
TGTCAAGTAATGTCAACAAT+GGG + chr5.1:19877606-19877625 MS.gene97737:CDS 30.0%
TTAAGCAAAGGAATGAGTTA+AGG + chr5.1:19880831-19880850 MS.gene97737:CDS 30.0%
TTCCTTTGCTTAAGATTCAA+AGG - chr5.1:19880824-19880843 None:intergenic 30.0%
TTGTCAAGTAATGTCAACAA+TGG + chr5.1:19877605-19877624 MS.gene97737:CDS 30.0%
TTTCCTAGTTGTGATTCTAA+CGG - chr5.1:19882764-19882783 None:intergenic 30.0%
TTTGAACAGAAAGAAGAAGA+AGG + chr5.1:19877826-19877845 MS.gene97737:intron 30.0%
! AAATACCTCTTCTTTTAACC+GGG - chr5.1:19879552-19879571 None:intergenic 30.0%
! AGATGAAAAATCACTTGCTA+TGG + chr5.1:19880670-19880689 MS.gene97737:CDS 30.0%
! ATTTTATGTCCTAATTGTGG+TGG + chr5.1:19879467-19879486 MS.gene97737:CDS 30.0%
! CAAATAAATTGATTAGCCAC+GGG + chr5.1:19880353-19880372 MS.gene97737:intron 30.0%
! TAACTATGTGTATAGTGGAA+TGG + chr5.1:19882439-19882458 MS.gene97737:CDS 30.0%
! TATGATTTTCTTACACATGC+AGG + chr5.1:19883226-19883245 MS.gene97737:intron 30.0%
! TCAGTCTTTGTTTATCATCT+GGG - chr5.1:19878349-19878368 None:intergenic 30.0%
! TGAAAAAACGCGTTTTCTTT+TGG + chr5.1:19878920-19878939 MS.gene97737:intron 30.0%
! TTCAGTCTTTGTTTATCATC+TGG - chr5.1:19878350-19878369 None:intergenic 30.0%
! TTTTATGTCCTAATTGTGGT+GGG + chr5.1:19879468-19879487 MS.gene97737:CDS 30.0%
!! AATCTAAAATGAGGCCTTTT+AGG + chr5.1:19880011-19880030 MS.gene97737:intron 30.0%
!! ATTCCCTGTGATTTTAAGAA+TGG - chr5.1:19882929-19882948 None:intergenic 30.0%
!! TAATTTTGATGAGCATGCTA+GGG + chr5.1:19880787-19880806 MS.gene97737:CDS 30.0%
!! TTAATTTTGATGAGCATGCT+AGG + chr5.1:19880786-19880805 MS.gene97737:CDS 30.0%
!!! AAGAAAACGCGTTTTTTCAT+TGG - chr5.1:19878919-19878938 None:intergenic 30.0%
!!! AGAAAACGCGTTTTTTCATT+GGG - chr5.1:19878918-19878937 None:intergenic 30.0%
!!! ATGCTGTAAGTTTTGTTGTT+TGG + chr5.1:19880921-19880940 MS.gene97737:intron 30.0%
!!! TTTTTGGTAATTTGATGACG+TGG + chr5.1:19881762-19881781 MS.gene97737:intron 30.0%
AACCTACATTTATGCGAAGA+AGG - chr5.1:19883149-19883168 None:intergenic 35.0%
AAGAAAATGAGTCTCTCTAG+TGG - chr5.1:19882116-19882135 None:intergenic 35.0%
AAGACTTTGGTATGAGGATA+AGG - chr5.1:19882847-19882866 None:intergenic 35.0%
AAGCTTAGTAGTCTACACTA+CGG + chr5.1:19883313-19883332 MS.gene97737:CDS 35.0%
AAGTAATGTCAACAATGGGA+GGG + chr5.1:19877610-19877629 MS.gene97737:CDS 35.0%
AATACCCTGCATCAAATTGA+AGG + chr5.1:19883608-19883627 MS.gene97737:CDS 35.0%
ACCTACATTTATGCGAAGAA+GGG - chr5.1:19883148-19883167 None:intergenic 35.0%
ACTGAAACTAAGCCATGATT+TGG + chr5.1:19878364-19878383 MS.gene97737:CDS 35.0%
AGAAACATATCAGATCTTGG+AGG + chr5.1:19882530-19882549 MS.gene97737:CDS 35.0%
AGATCAAAGACTTTGGTATG+AGG - chr5.1:19882853-19882872 None:intergenic 35.0%
AGATGGATGCACTTTCTAAT+GGG + chr5.1:19883064-19883083 MS.gene97737:intron 35.0%
ATATCAGGTCCCATTATACA+TGG - chr5.1:19879494-19879513 None:intergenic 35.0%
ATTACCATGGAAGAAGGAAA+GGG - chr5.1:19877720-19877739 None:intergenic 35.0%
ATTCTTATCCCAAATACTGC+AGG + chr5.1:19882218-19882237 MS.gene97737:CDS 35.0%
CACACCTAGTTATATATTGG+TGG + chr5.1:19881320-19881339 MS.gene97737:intron 35.0%
CTCACCATTCTTAAAATCAC+AGG + chr5.1:19882922-19882941 MS.gene97737:intron 35.0%
CTGAAACTAAGCCATGATTT+GGG + chr5.1:19878365-19878384 MS.gene97737:CDS 35.0%
GAAGAAGAAGGAATATTGAG+AGG + chr5.1:19877838-19877857 MS.gene97737:CDS 35.0%
GAATTGTAGTCAAATGCAAC+CGG + chr5.1:19882945-19882964 MS.gene97737:intron 35.0%
GAGAGGTAAAGAAGAGATAA+TGG + chr5.1:19877855-19877874 MS.gene97737:CDS 35.0%
GCTAGAAACATATCAGATCT+TGG + chr5.1:19882527-19882546 MS.gene97737:CDS 35.0%
GGAATACAGACTGTATATGA+TGG - chr5.1:19879060-19879079 None:intergenic 35.0%
GTCAAATGAATGAACCACTT+TGG + chr5.1:19880732-19880751 MS.gene97737:CDS 35.0%
GTTTCCAACAATTGTTGCTA+GGG + chr5.1:19881051-19881070 MS.gene97737:CDS 35.0%
TAAGTCAGGAAATGAACAAG+AGG + chr5.1:19877912-19877931 MS.gene97737:CDS 35.0%
TACCTTGTAGCAAAAATGGA+TGG + chr5.1:19881024-19881043 MS.gene97737:intron 35.0%
TACTAGGGTTACACTTCAAA+CGG + chr5.1:19879158-19879177 MS.gene97737:intron 35.0%
TATTACCATGGAAGAAGGAA+AGG - chr5.1:19877721-19877740 None:intergenic 35.0%
TCAGCATTTGATGAAACCAT+TGG - chr5.1:19883422-19883441 None:intergenic 35.0%
TCTCACATTCATTTCGTCAA+AGG - chr5.1:19878540-19878559 None:intergenic 35.0%
TCTTGAAAATGTGAAGGTTC+AGG - chr5.1:19880629-19880648 None:intergenic 35.0%
TGAAGTTGAAGCTAGAGTTA+TGG - chr5.1:19877677-19877696 None:intergenic 35.0%
TGAATGAACCACTTTGGATT+CGG + chr5.1:19880738-19880757 MS.gene97737:CDS 35.0%
TGACAATTAAAAAGGAACGG+AGG + chr5.1:19878851-19878870 MS.gene97737:intron 35.0%
TGAGAACTATAGGCTACAAT+CGG + chr5.1:19879433-19879452 MS.gene97737:CDS 35.0%
TGCATAACATCAAGATACAC+TGG + chr5.1:19880470-19880489 MS.gene97737:CDS 35.0%
TGGGAACTCATTAAATGAAG+TGG + chr5.1:19883083-19883102 MS.gene97737:CDS 35.0%
TGTTTCCAACAATTGTTGCT+AGG + chr5.1:19881050-19881069 MS.gene97737:CDS 35.0%
TTGAAGCTAGAGTTATGGAT+CGG - chr5.1:19877672-19877691 None:intergenic 35.0%
! AAAAAAGGATTAGCGATTGC+AGG + chr5.1:19881843-19881862 MS.gene97737:intron 35.0%
! AAAAAAGGATTAGCGATTGC+AGG - chr5.1:19881862-19881843 None:intergenic 35.0%
! AAAAAGGATTAGCGATTGCA+GGG + chr5.1:19881844-19881863 MS.gene97737:intron 35.0%
! AAAAAGGATTAGCGATTGCA+GGG - chr5.1:19881863-19881844 None:intergenic 35.0%
! AACTTCGATTTGAAAATGCC+CGG + chr5.1:19879531-19879550 MS.gene97737:CDS 35.0%
! ACAATCATGGACTGCTATAT+CGG + chr5.1:19882723-19882742 MS.gene97737:CDS 35.0%
! ACGAGACCATATTTAAAGCA+AGG - chr5.1:19878175-19878194 None:intergenic 35.0%
! ATGTATAATGGGACCTGATA+TGG + chr5.1:19879493-19879512 MS.gene97737:CDS 35.0%
! CTAGAGAGACTCATTTTCTT+CGG + chr5.1:19882116-19882135 MS.gene97737:CDS 35.0%
! GAACAAGTTGAAGATAAGTC+AGG + chr5.1:19877898-19877917 MS.gene97737:CDS 35.0%
! GGTTGACCTTGCTTTAAATA+TGG + chr5.1:19878166-19878185 MS.gene97737:intron 35.0%
! GTGAGGTGATGAATATTTTG+TGG - chr5.1:19882907-19882926 None:intergenic 35.0%
! TCAGGTTGTCTTCTTATCAT+GGG + chr5.1:19883506-19883525 MS.gene97737:CDS 35.0%
! TGTATAATGGGACCTGATAT+GGG + chr5.1:19879494-19879513 MS.gene97737:CDS 35.0%
! TTTTGTTGGAAGCTATCAAC+AGG - chr5.1:19882190-19882209 None:intergenic 35.0%
!! ATAATGGATCAAAGTGGTTC+AGG + chr5.1:19877871-19877890 MS.gene97737:CDS 35.0%
!! CTGTGATTTTAAGAATGGTG+AGG - chr5.1:19882924-19882943 None:intergenic 35.0%
!! GAACCTTCACATTTTCAAGA+GGG + chr5.1:19880629-19880648 MS.gene97737:CDS 35.0%
!! GAAGAGATAATGGATCAAAG+TGG + chr5.1:19877865-19877884 MS.gene97737:CDS 35.0%
!! TGAACCTTCACATTTTCAAG+AGG + chr5.1:19880628-19880647 MS.gene97737:CDS 35.0%
!! TTCCATCCATTTTTGCTACA+AGG - chr5.1:19881029-19881048 None:intergenic 35.0%
!!! AAGGTTTTAAATTGCGGTTG+CGG + chr5.1:19878096-19878115 MS.gene97737:intron 35.0%
AAATATGGTCTCGTTGCAGT+TGG + chr5.1:19878181-19878200 MS.gene97737:intron 40.0%
AAATGCCCGGTTAAAAGAAG+AGG + chr5.1:19879544-19879563 MS.gene97737:CDS 40.0%
AAGGTTCAGGTGGTAACATA+GGG - chr5.1:19880616-19880635 None:intergenic 40.0%
ACACCGTTAGAATCACAACT+AGG + chr5.1:19882758-19882777 MS.gene97737:CDS 40.0%
ACAGGAATCATTTCAGTGCA+TGG - chr5.1:19880593-19880612 None:intergenic 40.0%
ACATGCCAAATGGCTATTCA+AGG + chr5.1:19882266-19882285 MS.gene97737:CDS 40.0%
ACGAAGGAGATCAAAGACTT+TGG - chr5.1:19882860-19882879 None:intergenic 40.0%
ACTAGGGTTACACTTCAAAC+GGG + chr5.1:19879159-19879178 MS.gene97737:intron 40.0%
AGAGGGTGGTCTCTTATTAA+TGG + chr5.1:19880646-19880665 MS.gene97737:CDS 40.0%
AGCAAGGTCAACCATATGTT+AGG - chr5.1:19878159-19878178 None:intergenic 40.0%
AGCACCTTCAATTTGATGCA+GGG - chr5.1:19883615-19883634 None:intergenic 40.0%
AGCCTTAATATGACCACTTG+TGG + chr5.1:19882697-19882716 MS.gene97737:CDS 40.0%
ATACCAACGGAGAAAGAACT+TGG - chr5.1:19882093-19882112 None:intergenic 40.0%
ATTATAGCTTCAGGTGCTTC+TGG + chr5.1:19881088-19881107 MS.gene97737:CDS 40.0%
ATTCCAAGTTCTTTCTCCGT+TGG + chr5.1:19882087-19882106 MS.gene97737:CDS 40.0%
CAAGTAATGTCAACAATGGG+AGG + chr5.1:19877609-19877628 MS.gene97737:CDS 40.0%
CACCACAAGTGGTCATATTA+AGG - chr5.1:19882702-19882721 None:intergenic 40.0%
CAGATGGATGCACTTTCTAA+TGG + chr5.1:19883063-19883082 MS.gene97737:intron 40.0%
CATCAGACACAACACAAACA+TGG - chr5.1:19881941-19881960 None:intergenic 40.0%
CATGCCAAATGGCTATTCAA+GGG + chr5.1:19882267-19882286 MS.gene97737:CDS 40.0%
CTTAATATGACCACTTGTGG+TGG + chr5.1:19882700-19882719 MS.gene97737:CDS 40.0%
CTTTGCAGGGGCAAAAAAAA+AGG + chr5.1:19881828-19881847 MS.gene97737:intron 40.0%
CTTTGCAGGGGCAAAAAAAA+AGG - chr5.1:19881847-19881828 None:intergenic 40.0%
GAAAGGTTAAGCTTTGCAGA+AGG - chr5.1:19883557-19883576 None:intergenic 40.0%
GAAGAAGGAAAGGGTTGAAA+AGG - chr5.1:19877711-19877730 None:intergenic 40.0%
GAAGTGGCTCATATTGCTAA+CGG + chr5.1:19883099-19883118 MS.gene97737:CDS 40.0%
GCTGATACATCATCTGAACA+AGG + chr5.1:19883437-19883456 MS.gene97737:CDS 40.0%
GGAATTGACGAAAATACCCT+TGG - chr5.1:19881735-19881754 None:intergenic 40.0%
GGCCTTTGAATCTTAAGCAA+AGG + chr5.1:19880819-19880838 MS.gene97737:CDS 40.0%
GTATTGTCAGCAAAATGTCG+AGG + chr5.1:19882138-19882157 MS.gene97737:CDS 40.0%
GTCATTCAAGACATGCCAAA+TGG + chr5.1:19882256-19882275 MS.gene97737:CDS 40.0%
TAGCCACTAACAAGTGAAAC+TGG - chr5.1:19881222-19881241 None:intergenic 40.0%
TCCCTTCTTCGCATAAATGT+AGG + chr5.1:19883144-19883163 MS.gene97737:intron 40.0%
TGAAAATGTGAAGGTTCAGG+TGG - chr5.1:19880626-19880645 None:intergenic 40.0%
TGATCATCAAAGCCCATATC+AGG - chr5.1:19879509-19879528 None:intergenic 40.0%
TGATTGCTGTGACACTTGAA+AGG - chr5.1:19883574-19883593 None:intergenic 40.0%
TGTACCCTTGAATAGCCATT+TGG - chr5.1:19882274-19882293 None:intergenic 40.0%
TGTCTGATACCGACACATAT+TGG - chr5.1:19881276-19881295 None:intergenic 40.0%
TTAACCTTACCTGTCACATG+TGG + chr5.1:19879095-19879114 MS.gene97737:intron 40.0%
TTCATGTCTAAGTCCAGTGA+TGG - chr5.1:19880539-19880558 None:intergenic 40.0%
TTTGCAGAGGCAATGTGAAA+GGG + chr5.1:19882490-19882509 MS.gene97737:CDS 40.0%
! AGGATTCATGATAGTGCCAA+TGG + chr5.1:19883403-19883422 MS.gene97737:CDS 40.0%
! CTCAGGTTGTCTTCTTATCA+TGG + chr5.1:19883505-19883524 MS.gene97737:CDS 40.0%
! CTTTGTTTATCATCTGGGTG+TGG - chr5.1:19878344-19878363 None:intergenic 40.0%
! GAAGAAGTGCAATGCATGAA+GGG - chr5.1:19883379-19883398 None:intergenic 40.0%
! GCAACCGCAATTTAAAACCT+TGG - chr5.1:19878097-19878116 None:intergenic 40.0%
! GCAGTCATTAACTTGGTCAA+AGG + chr5.1:19881784-19881803 MS.gene97737:intron 40.0%
! GCAGTCATTAACTTGGTCAA+AGG - chr5.1:19881803-19881784 None:intergenic 40.0%
! GGGCATTTTCAAATCGAAGT+TGG - chr5.1:19879532-19879551 None:intergenic 40.0%
! GTGTATAGTGGAATGGCATT+TGG + chr5.1:19882446-19882465 MS.gene97737:CDS 40.0%
! GTTTTTCGTCCCTGCAAATA+GGG + chr5.1:19881352-19881371 MS.gene97737:intron 40.0%
! TAGCCAGTTTCACTTGTTAG+TGG + chr5.1:19881216-19881235 MS.gene97737:intron 40.0%
! TATTGCTAACGGATCACATC+CGG + chr5.1:19883110-19883129 MS.gene97737:CDS 40.0%
! TCTGAAACCAGAACTTAACC+TGG - chr5.1:19878403-19878422 None:intergenic 40.0%
! TGTTTTTCGTCCCTGCAAAT+AGG + chr5.1:19881351-19881370 MS.gene97737:intron 40.0%
! TTTTGCAGAGGCAATGTGAA+AGG + chr5.1:19882489-19882508 MS.gene97737:CDS 40.0%
!! AGCATGCTAGGGTTTTTCAA+TGG + chr5.1:19880798-19880817 MS.gene97737:CDS 40.0%
!! CTGATATGTTTCTAGCCATG+AGG - chr5.1:19882523-19882542 None:intergenic 40.0%
!! TTGGCACTAGTAGTTGATGA+TGG - chr5.1:19883476-19883495 None:intergenic 40.0%
!!! GTCAATTCCCATGCCATTTT+TGG + chr5.1:19881746-19881765 MS.gene97737:intron 40.0%
AAAATGTCGAGGAAGGAACC+TGG + chr5.1:19882149-19882168 MS.gene97737:CDS 45.0%
AAATGTCGAGGAAGGAACCT+GGG + chr5.1:19882150-19882169 MS.gene97737:CDS 45.0%
AAGCCAAGTGGTTGAAACTG+CGG - chr5.1:19882824-19882843 None:intergenic 45.0%
ACAACCTGAGTTAGCAGCAT+TGG - chr5.1:19883495-19883514 None:intergenic 45.0%
ACTAGGAAAATCACTGAGCC+TGG + chr5.1:19882775-19882794 MS.gene97737:CDS 45.0%
AGAAGGGAAATGCAGTTTCC+CGG - chr5.1:19883132-19883151 None:intergenic 45.0%
AGGAAAATCAACAATGGCCC+AGG - chr5.1:19882170-19882189 None:intergenic 45.0%
AGGAAAGGGTTGAAAAGGCA+TGG - chr5.1:19877706-19877725 None:intergenic 45.0%
ATACATGGCCCACCACAATT+AGG - chr5.1:19879479-19879498 None:intergenic 45.0%
ATCTCTTATGCCACCATCAC+TGG + chr5.1:19880523-19880542 MS.gene97737:CDS 45.0%
ATGAGGATAAGGAAGCCAAG+TGG - chr5.1:19882836-19882855 None:intergenic 45.0%
ATGTCTAAGTCCAGTGATGG+TGG - chr5.1:19880536-19880555 None:intergenic 45.0%
ATTTCAGTGCATGGTGGCAT+TGG - chr5.1:19880584-19880603 None:intergenic 45.0%
CACGTGTGTCAGTGTTATGT+TGG - chr5.1:19881299-19881318 None:intergenic 45.0%
CCACCCTCTTGAAAATGTGA+AGG - chr5.1:19880635-19880654 None:intergenic 45.0%
CTTATCCCAAATACTGCAGG+AGG + chr5.1:19882221-19882240 MS.gene97737:CDS 45.0%
CTTGCCCTAGCAACAATTGT+TGG - chr5.1:19881058-19881077 None:intergenic 45.0%
CTTGTCCACTCATAGCTAGT+TGG - chr5.1:19883355-19883374 None:intergenic 45.0%
GAACCACTTTGGATTCGGAA+CGG + chr5.1:19880743-19880762 MS.gene97737:CDS 45.0%
GAAGGTTCAGGTGGTAACAT+AGG - chr5.1:19880617-19880636 None:intergenic 45.0%
GAATCGTCGAACTCAGATGA+AGG + chr5.1:19878421-19878440 MS.gene97737:CDS 45.0%
GAGAGTTGCACAGATCAATC+TGG + chr5.1:19883290-19883309 MS.gene97737:CDS 45.0%
GAGCACCTTCAATTTGATGC+AGG - chr5.1:19883616-19883635 None:intergenic 45.0%
GATTGCAGTGATACCTTCTC+CGG + chr5.1:19882624-19882643 MS.gene97737:intron 45.0%
GGAACTTGCAGCTTCTTCTA+TGG + chr5.1:19880691-19880710 MS.gene97737:CDS 45.0%
GGAATCATTTCAGTGCATGG+TGG - chr5.1:19880590-19880609 None:intergenic 45.0%
GGCACTATCATGAATCCTTG+TGG - chr5.1:19883401-19883420 None:intergenic 45.0%
GTGATTCTAACGGTGTCTTC+TGG - chr5.1:19882754-19882773 None:intergenic 45.0%
GTGGTTTCAGTCCCAAATCA+TGG - chr5.1:19878379-19878398 None:intergenic 45.0%
TCAACCCTTTCCTTCTTCCA+TGG + chr5.1:19877713-19877732 MS.gene97737:CDS 45.0%
TCGGAACGGTGAGAATGATA+GGG + chr5.1:19880757-19880776 MS.gene97737:CDS 45.0%
TGACGTGGCAGTCATTAACT+TGG + chr5.1:19881777-19881796 MS.gene97737:intron 45.0%
TGACGTGGCAGTCATTAACT+TGG - chr5.1:19881796-19881777 None:intergenic 45.0%
TGCATTGCACTTCTTCCACA+AGG + chr5.1:19883383-19883402 MS.gene97737:CDS 45.0%
TGCTCGTCAGATCCAAGAAA+TGG + chr5.1:19877984-19878003 MS.gene97737:CDS 45.0%
TGTCAGCAAAATGTCGAGGA+AGG + chr5.1:19882142-19882161 MS.gene97737:CDS 45.0%
TTAAGCGAGCCCTATTTGCA+GGG - chr5.1:19881364-19881383 None:intergenic 45.0%
TTCGGAACGGTGAGAATGAT+AGG + chr5.1:19880756-19880775 MS.gene97737:CDS 45.0%
TTTAAGCGAGCCCTATTTGC+AGG - chr5.1:19881365-19881384 None:intergenic 45.0%
TTTGTGGTACCTGAGATCTG+TGG - chr5.1:19882891-19882910 None:intergenic 45.0%
! ATTGCTAACGGATCACATCC+GGG + chr5.1:19883111-19883130 MS.gene97737:CDS 45.0%
! GATGGTGGCATAAGAGATGA+TGG - chr5.1:19880521-19880540 None:intergenic 45.0%
! GGAAGAAGTGCAATGCATGA+AGG - chr5.1:19883380-19883399 None:intergenic 45.0%
! GTCTCTCTAGTGGATACCAA+CGG - chr5.1:19882106-19882125 None:intergenic 45.0%
! GTTGGTTAGGAGTTTTGCAG+AGG + chr5.1:19882477-19882496 MS.gene97737:CDS 45.0%
! TCATCTGAACAAGGTGTCAC+AGG + chr5.1:19883446-19883465 MS.gene97737:CDS 45.0%
! TTTGGTGCACAACGTTGGTT+AGG + chr5.1:19882464-19882483 MS.gene97737:CDS 45.0%
!! ATGATGGTGGTGCCATTGTT+TGG - chr5.1:19880505-19880524 None:intergenic 45.0%
!! CCTTCACATTTTCAAGAGGG+TGG + chr5.1:19880632-19880651 MS.gene97737:CDS 45.0%
!! TGTGGTGGGCCATGTATAAT+GGG + chr5.1:19879482-19879501 MS.gene97737:CDS 45.0%
!! TTGTGGTGGGCCATGTATAA+TGG + chr5.1:19879481-19879500 MS.gene97737:CDS 45.0%
!! TTTGATGCAGGGTATTGCAG+AGG - chr5.1:19883604-19883623 None:intergenic 45.0%
!!! GGTCATGGAATTTTTTCCCG+TGG - chr5.1:19880372-19880391 None:intergenic 45.0%
AAATACTGCAGGAGGTCCTC+TGG + chr5.1:19882229-19882248 MS.gene97737:CDS 50.0%
AACCACGCCAGGTTAAGTTC+TGG + chr5.1:19878393-19878412 MS.gene97737:CDS 50.0%
AACCAGAACTTAACCTGGCG+TGG - chr5.1:19878398-19878417 None:intergenic 50.0%
AGAGGACCTCCTGCAGTATT+TGG - chr5.1:19882230-19882249 None:intergenic 50.0%
AGTGCCAATGCTGCTAACTC+AGG + chr5.1:19883488-19883507 MS.gene97737:CDS 50.0%
ATCAAGCTCTTTCGCGCTTC+CGG - chr5.1:19882646-19882665 None:intergenic 50.0%
CCATGATTGTCCACCACAAG+TGG - chr5.1:19882713-19882732 None:intergenic 50.0%
CTAGTGCACCTTCCAAGTAG+AGG + chr5.1:19883690-19883709 MS.gene97737:CDS 50.0%
GAGACCACATGTGACAGGTA+AGG - chr5.1:19879102-19879121 None:intergenic 50.0%
GAGGACCTCCTGCAGTATTT+GGG - chr5.1:19882229-19882248 None:intergenic 50.0%
GTCTTGAATGACACAGCCAG+AGG - chr5.1:19882248-19882267 None:intergenic 50.0%
GTTTGGAGACCACATGTGAC+AGG - chr5.1:19879107-19879126 None:intergenic 50.0%
TCACCGTTCCGAATCCAAAG+TGG - chr5.1:19880749-19880768 None:intergenic 50.0%
TCAGGTGGTAACATAGGGAC+AGG - chr5.1:19880611-19880630 None:intergenic 50.0%
TCGGTCCAACTAGCTATGAG+TGG + chr5.1:19883347-19883366 MS.gene97737:CDS 50.0%
TGAAAGGGTTGCAAGCCTCA+TGG + chr5.1:19882505-19882524 MS.gene97737:CDS 50.0%
TGGTCGTCCACTCCAAACAA+TGG + chr5.1:19880490-19880509 MS.gene97737:CDS 50.0%
! CACTACGGTCGACGTTGATT+CGG + chr5.1:19883328-19883347 MS.gene97737:CDS 50.0%
! CTACTTGGAAGGTGCACTAG+TGG - chr5.1:19883690-19883709 None:intergenic 50.0%
! GGCATTGGATCAAAGTGCCT+TGG - chr5.1:19880569-19880588 None:intergenic 50.0%
! GGTGGCATAAGAGATGATGG+TGG - chr5.1:19880518-19880537 None:intergenic 50.0%
! TTGGAAGGTGCACTAGTGGT+TGG - chr5.1:19883686-19883705 None:intergenic 50.0%
!! CCACTTGTGGTGGACAATCA+TGG + chr5.1:19882710-19882729 MS.gene97737:CDS 50.0%
!! TGGCATTTGGTGCACAACGT+TGG + chr5.1:19882459-19882478 MS.gene97737:CDS 50.0%
AGTGGGACTCTTCAGCTGGT+AGG + chr5.1:19881118-19881137 MS.gene97737:intron 55.0%
ATCTGTGGCGTTCGTCACGA+AGG - chr5.1:19882876-19882895 None:intergenic 55.0%
CGAGAATCACTCCACTGGGT+TGG - chr5.1:19882801-19882820 None:intergenic 55.0%
GCTGAAGAGTCCCACTTGCA+TGG - chr5.1:19881114-19881133 None:intergenic 55.0%
GTGCTTCTGGCCATGCAAGT+GGG + chr5.1:19881101-19881120 MS.gene97737:CDS 55.0%
TCGCCGCAGTTTCAACCACT+TGG + chr5.1:19882818-19882837 MS.gene97737:CDS 55.0%
TGACGAACGCCACAGATCTC+AGG + chr5.1:19882879-19882898 MS.gene97737:CDS 55.0%
TGCAAGTGGGACTCTTCAGC+TGG + chr5.1:19881114-19881133 MS.gene97737:CDS 55.0%
! TTTGGGACTGAAACCACGCC+AGG + chr5.1:19878382-19878401 MS.gene97737:CDS 55.0%
!! GATGCAGGGTATTGCAGAGG+TGG - chr5.1:19883601-19883620 None:intergenic 55.0%
!! GGTGGTGCCATTGTTTGGAG+TGG - chr5.1:19880500-19880519 None:intergenic 55.0%
CTCTTTCGCGCTTCCGGAGA+AGG - chr5.1:19882640-19882659 None:intergenic 60.0%
GCGGCGAGAATCACTCCACT+GGG - chr5.1:19882805-19882824 None:intergenic 60.0%
GGTGCTTCTGGCCATGCAAG+TGG + chr5.1:19881100-19881119 MS.gene97737:CDS 60.0%
TGCGGCGAGAATCACTCCAC+TGG - chr5.1:19882806-19882825 None:intergenic 60.0%
!! ATCACTCCACTGGGTTGGCC+AGG - chr5.1:19882796-19882815 None:intergenic 60.0%
ACTGAGCCTGGCCAACCCAG+TGG + chr5.1:19882787-19882806 MS.gene97737:CDS 65.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 19877594 19883709 19877594 ID=MS.gene97737
chr5.1 mRNA 19877594 19883709 19877594 ID=MS.gene97737.t1;Parent=MS.gene97737
chr5.1 exon 19877594 19877734 19877594 ID=MS.gene97737.t1.exon1;Parent=MS.gene97737.t1
chr5.1 CDS 19877594 19877734 19877594 ID=cds.MS.gene97737.t1;Parent=MS.gene97737.t1
chr5.1 exon 19877835 19878010 19877835 ID=MS.gene97737.t1.exon2;Parent=MS.gene97737.t1
chr5.1 CDS 19877835 19878010 19877835 ID=cds.MS.gene97737.t1;Parent=MS.gene97737.t1
chr5.1 exon 19878325 19878442 19878325 ID=MS.gene97737.t1.exon3;Parent=MS.gene97737.t1
chr5.1 CDS 19878325 19878442 19878325 ID=cds.MS.gene97737.t1;Parent=MS.gene97737.t1
chr5.1 exon 19879374 19879565 19879374 ID=MS.gene97737.t1.exon4;Parent=MS.gene97737.t1
chr5.1 CDS 19879374 19879565 19879374 ID=cds.MS.gene97737.t1;Parent=MS.gene97737.t1
chr5.1 exon 19880455 19880925 19880455 ID=MS.gene97737.t1.exon5;Parent=MS.gene97737.t1
chr5.1 CDS 19880455 19880925 19880455 ID=cds.MS.gene97737.t1;Parent=MS.gene97737.t1
chr5.1 exon 19881034 19881135 19881034 ID=MS.gene97737.t1.exon6;Parent=MS.gene97737.t1
chr5.1 CDS 19881034 19881135 19881034 ID=cds.MS.gene97737.t1;Parent=MS.gene97737.t1
chr5.1 exon 19882076 19882288 19882076 ID=MS.gene97737.t1.exon7;Parent=MS.gene97737.t1
chr5.1 CDS 19882076 19882288 19882076 ID=cds.MS.gene97737.t1;Parent=MS.gene97737.t1
chr5.1 exon 19882383 19882551 19882383 ID=MS.gene97737.t1.exon8;Parent=MS.gene97737.t1
chr5.1 CDS 19882383 19882551 19882383 ID=cds.MS.gene97737.t1;Parent=MS.gene97737.t1
chr5.1 exon 19882632 19882900 19882632 ID=MS.gene97737.t1.exon9;Parent=MS.gene97737.t1
chr5.1 CDS 19882632 19882900 19882632 ID=cds.MS.gene97737.t1;Parent=MS.gene97737.t1
chr5.1 exon 19883066 19883161 19883066 ID=MS.gene97737.t1.exon10;Parent=MS.gene97737.t1
chr5.1 CDS 19883066 19883161 19883066 ID=cds.MS.gene97737.t1;Parent=MS.gene97737.t1
chr5.1 exon 19883248 19883709 19883248 ID=MS.gene97737.t1.exon11;Parent=MS.gene97737.t1
chr5.1 CDS 19883248 19883709 19883248 ID=cds.MS.gene97737.t1;Parent=MS.gene97737.t1
Gene Sequence

>MS.gene97737

ATGTATGGTGATTGTCAAGTAATGTCAACAATGGGAGGGAATGTAGTAGTAAACTCAGAATCTCTCTTCTCTTCTCCGATCCATAACTCTAGCTTCAACTTCATGTCAACCATGCCTTTTCAACCCTTTCCTTCTTCCATGGTAATATTTTTACTATTTATAAAGCTTTTCACTTTTTTTCACTTGCATTTTGTATCTCATTGTAACTTTTTTCTTCATTTTGGTGAATATTTTTGAACAGAAAGAAGAAGAAGGAATATTGAGAGGTAAAGAAGAGATAATGGATCAAAGTGGTTCAGGAAGTGAACAAGTTGAAGATAAGTCAGGAAATGAACAAGAGGTTAATAATGAACAACAAGCTACAAAGAAGAAACGTTATCATAGACACACTGCTCGTCAGATCCAAGAAATGGAAGCGTATAATACTAAAATCTCTCTCTTTCTCTATATTTTTGCTAGATCTCTCTTTCTCTCTATTATTTTAATTCATACAGTGATAACCAAGGTTTTAAATTGCGGTTGCGGTCGCATATTTTCCATGATATTATATGAAAAATTATGACCTAACATATGGTTGACCTTGCTTTAAATATGGTCTCGTTGCAGTTGGAGAGACATAAAAATCTTGATATTAAGCGTGACATACTAGTATTTTTTTTAAACCCTAAATATATTTTAAGGCTAAATTCTTGCATGTGTAAAATAATTAATATACTATAAATTATATGCAGTTTGTTCAAGGAATGTCCACACCCAGATGATAAACAAAGACTGAAACTAAGCCATGATTTGGGACTGAAACCACGCCAGGTTAAGTTCTGGTTTCAGAATCGTCGAACTCAGATGAAGGTACACGATATCAAGAGTTTAAACTTTAATAATTACATTACTTTTCAACTTTCCATTAAGACGTTTATTCTTCTTTTTTTCTTCTTCTATATAACCTTTGACGAAATGAATGTGAGAAAATTAAATAAAAACCCTAAACTGTTGTACAAAGTCTTTATTACTCCCTCTGTTTCTTTTTAAGTGTCACTTTTAGATAAAAATTTTGTTTCAATTTAACTGTCACTTTCAAAGTTCAATGCAACATTAAATGTTGTTTTACCATTATTACCCTTAGTTATTTATTGTGGAGAGAGAAGTATATGAAAGAAGATATTAAATGAATAAGGTCATTATGGTAAAAATATAAATTATTGTATCAAAAGTAGTAACATTTATTTATTGTCTTGGTATGTGTAAAATGTCAAAATGTGACAATTAAAAAGGAACGGAGGTAGTAATTAGAGCTACATTAAATATTTTACGTTGCACGTTTCCCAATGAAAAAACGCGTTTTCTTTTGGTTTTTTGCATTAAAAATTTTTGAGCTATGAACAAACATCTATTACTACTAGGAAGTGTTATAAGAAAAGAGTTTTCAATTTTCATTTCATATAGTTAATGGTTATTGGTGTTGTCCATCATATACAGTCTGTATTCCATTAATGTAACGCATTTAACCTTACCTGTCACATGTGGTCTCCAAACGCTACTCATATTTATTGCTATATATCATCATTACTAGGGTTACACTTCAAACGGGTATTAATTTTTCAAAACCATTAAAAAAAATTGGGGTACTAAAACCATTAAGTATTTATTCTTAGAATAGAAATGTATTATTGTTTAGTACTCTACGGTTGATTAATTATTGGTTGAGTATATTGATAATAAATCAGTGCATATTTTAATTGTTTACTAATTTTGGGATATATTGTTGTTGTTATTATTATAGGCACAACAAGATCGTTCTGATAATGTGATACTTAGAGCAGAGAATGAGAGTTTGAAGAATGAGAACTATAGGCTACAATCGGCATTACGTAATATTTTATGTCCTAATTGTGGTGGGCCATGTATAATGGGACCTGATATGGGCTTTGATGATCACCAACTTCGATTTGAAAATGCCCGGTTAAAAGAAGAGGTATTTAACTTTAACTAACTTGTGTTTCATTTCTAAAATAAATATTTTTGTTTCTATAAATTTTAATTAAAAATCATGTTGGATATAATGTGATATGTGTCATATGATATGTATTTGTTTTCTTTTAGATGAACCTATGTAAATTCTTCACTTTAAGAATATGGAAAGAAAAAAAATTCAACAATGTAAATAAGATAGAACAAATAGTGTAAATAAGATAAACAAAAAATAGTATATGTTAAGTGGATAAATGCATAACAAATAAAAAAACAAATCAATTGTATATTTTTAACAAGGATTAATATTATTTTCTCTCTTAAATAATCTTTAAAATGTATAAAATAATAAGTGGTCTTTTGAGTAAGTCATATTTTTTGACAATAGGCTTACTTCTTTTTTTTTTTTTTTGATTGAATAAAAATTATACAAAATGAGGTTAAGGCAAAATCTAAAATGAGGCCTTTTAGGAATTATTAGTTTGTGCAAAAAAAAAAAAGTTATTAATTGTATTTGTTTTACGAAAGTAATATTTTAATTCAAAATTTCACTTTTTTTAACTTTTTTTGGATGCAAAATCATTCATTAAATTAAATTATTGTAATTGATTTCGTTTAACAACTCTTTTTCAATCGACAACAAAACAAATTCATTTATTCTTTGTGGACACACTTAATAATATCTTGTTGATTACTTGTTGATTTTTTCATTAGTGACAGTTTATTATTGAAGGGTTAAATTACTTGTTGATTTTTTCATTAGTGACAGTTTATATCACTTTCTTGAACTTCAAATAAATTGATTAGCCACGGGAAAAAATTCCATGACCTAATCTCTAATAGTATAAGAAAAAAATGCATGATTTAATTTGGAGAATGTGAATATTTTGCAGCTAGAACGTGTGTGCTGCATAACATCAAGATACACTGGTCGTCCACTCCAAACAATGGCACCACCATCATCTCTTATGCCACCATCACTGGACTTAGACATGAACATTTATCCAAGGCACTTTGATCCAATGCCACCATGCACTGAAATGATTCCTGTCCCTATGTTACCACCTGAACCTTCACATTTTCAAGAGGGTGGTCTCTTATTAATGGAAGATGAAAAATCACTTGCTATGGAACTTGCAGCTTCTTCTATGGCTGAGCTTGTTAAGATGTGTCAAATGAATGAACCACTTTGGATTCGGAACGGTGAGAATGATAGGGATGTTCTTAATTTTGATGAGCATGCTAGGGTTTTTCAATGGCCTTTGAATCTTAAGCAAAGGAATGAGTTAAGGAATGAAGCTACACGTGATTCTGCTGTTGTTATCATGAATAGTGTCACTCTTGTTGATGCTTTTCTTGATGCTGTAAGTTTTGTTGTTTGGTTTTTTTAGCATTGTTTTCTTCCTTCTCTTTTAATTTATTTCCATTTGTTTCTTATGAATTTTGTATTTATTTCTTTCTTTACCTTGTAGCAAAAATGGATGGAATTGTTTCCAACAATTGTTGCTAGGGCAAGAACTGTTCAAATTATAGCTTCAGGTGCTTCTGGCCATGCAAGTGGGACTCTTCAGCTGGTAGGTGTCAAATGATTGCTTGAATTTTTATGATATGCTTCAAGATATTGTTGTATTGATAAGCTTGATTTTTATGATATTAGCCAGTTTCACTTGTTAGTGGCTATGTATACCAATGATAAGATAGGTCTAAGTATCCAATATGTGTCGGTATCAGACACCAACATAACACTGACACACGTGACACACCTAGTTATATATTGGTGGCTTAAATATGTTTTTCGTCCCTGCAAATAGGGCTCGCTTAAAATTTCGTCCCTGCAATCGCTAATCCTTTTTTTTTGCCCCTGCAAAGTTTAATCAGTTAAAAATTCGTCCTTTGACCAAGTTAATGACTGCCACGTCATCAAATTACAAAAAATGACATGGGAATTGACAAAAATACCCCTAGCTTATTTTTTTTTTCCTTCAAAAAAAATTTTTTTCCAAAATTTTGATAATTCTTTTTTAAATTAAAAAAATAATTAAAAGTCAAAAAAAATTTCGGAAAAAAAATGTTAAAATTAAAACTGAAAAATTTTCGGGAAAAAATCGGAAAAAAAATTCGGGAAAAAATTGATTTTTTTTTGAAGGAAAAAAAACAAAAAAAAAATAAGCCAAGGGTATTTTCGTCAATTCCCATGCCATTTTTGGTAATTTGATGACGTGGCAGTCATTAACTTGGTCAAAGGACGAATTTTTAACTGATTAAACTTTGCAGGGGCAAAAAAAAAGGATTAGCGATTGCAGGGACGAATTTTTAAACGAGCCCTATTTGCAGGGGCGAAAAACATATTTAAGCCTATATTGGTGTTTACATTGTCCATGTTTGTGTTGTGTCTGATGTTCGTGTTTGTGTCATATAACGATCTCCTTTGTGATGTGTTTTATATTTTGTTTTTCTAAAATTGCTATTTGAATATTCAATGAACACTAATATATTGCATATTTTTGCGAACAGATGCACGCAGAATTCCAAGTTCTTTCTCCGTTGGTATCCACTAGAGAGACTCATTTTCTTCGGTATTGTCAGCAAAATGTCGAGGAAGGAACCTGGGCCATTGTTGATTTTCCTGTTGATAGCTTCCAACAAAACTTTCAAAATTCTTATCCCAAATACTGCAGGAGGTCCTCTGGCTGTGTCATTCAAGACATGCCAAATGGCTATTCAAGGGTACACAATAAGTCCTAGATATTTTTATTACACTCTTGTGCATTTGAATTATTCTTCAAAACATTAGGATGTTAATTTTTTATTATGTATGCAGGTAACATGGGTTGAACATGCAAAAGTTGTAGAGAAACCTGTCCATCAAATATTTAGTAACTATGTGTATAGTGGAATGGCATTTGGTGCACAACGTTGGTTAGGAGTTTTGCAGAGGCAATGTGAAAGGGTTGCAAGCCTCATGGCTAGAAACATATCAGATCTTGGAGGTTTAGTATTAAAGAAAAATATTTTATAGAATCGGGCGACGAAACAAATTTTATATTTGACATTTTATTTTGGATTGCAGTGATACCTTCTCCGGAAGCGCGAAAGAGCTTGATGAAATTAGCAAATAGGATGATAAAAACTTTTAGCCTTAATATGACCACTTGTGGTGGACAATCATGGACTGCTATATCGGATTCACCAGAAGACACCGTTAGAATCACAACTAGGAAAATCACTGAGCCTGGCCAACCCAGTGGAGTGATTCTCGCCGCAGTTTCAACCACTTGGCTTCCTTATCCTCATACCAAAGTCTTTGATCTCCTTCGTGACGAACGCCACAGATCTCAGGTACCACAAAATATTCATCACCTCACCATTCTTAAAATCACAGGGAATTGTAGTCAAATGCAACCGGTGTGACTTTAATATCTTGATGTCGCGGTCACTAACATTTTTATGAAAATTCTACAATAAGTTATTTACCTAAATTCTTGATTTTATTTTATTTTACAGATGGATGCACTTTCTAATGGGAACTCATTAAATGAAGTGGCTCATATTGCTAACGGATCACATCCGGGAAACTGCATTTCCCTTCTTCGCATAAATGTAGGTTTTGATTTGATGTGTATTATAGATATAGTTAGTAACTAACTATAGAGAGTAACTAACTTATGATTTTCTTACACATGCAGGTAGCAAGTAACTCATCTCAAAATGTAGAGCTAATGCTGCAAGAGAGTTGCACAGATCAATCTGGAAGCTTAGTAGTCTACACTACGGTCGACGTTGATTCGGTCCAACTAGCTATGAGTGGACAAGACCCTTCATGCATTGCACTTCTTCCACAAGGATTCATGATAGTGCCAATGGTTTCATCAAATGCTGATACATCATCTGAACAAGGTGTCACAGGAACACCATCATCAACTACTAGTGCCAATGCTGCTAACTCAGGTTGTCTTCTTATCATGGGAATGCAAGTTCTAGCAAGCACAATTCCTTCTGCAAAGCTTAACCTTTCAAGTGTCACAGCAATCAATAACCACCTCTGCAATACCCTGCATCAAATTGAAGGTGCTCTTTGTAGCAGCACTAACAACAATTGCTTTGTTGGATCTTGCAATGAACCAACCACTAGTGCACCTTCCAAGTAG
Protein sequence

>MS.gene97737.t1

MYGDCQVMSTMGGNVVVNSESLFSSPIHNSSFNFMSTMPFQPFPSSMKEEEGILRGKEEIMDQSGSGSEQVEDKSGNEQEVNNEQQATKKKRYHRHTARQIQEMEALFKECPHPDDKQRLKLSHDLGLKPRQVKFWFQNRRTQMKAQQDRSDNVILRAENESLKNENYRLQSALRNILCPNCGGPCIMGPDMGFDDHQLRFENARLKEELERVCCITSRYTGRPLQTMAPPSSLMPPSLDLDMNIYPRHFDPMPPCTEMIPVPMLPPEPSHFQEGGLLLMEDEKSLAMELAASSMAELVKMCQMNEPLWIRNGENDRDVLNFDEHARVFQWPLNLKQRNELRNEATRDSAVVIMNSVTLVDAFLDAQKWMELFPTIVARARTVQIIASGASGHASGTLQLMHAEFQVLSPLVSTRETHFLRYCQQNVEEGTWAIVDFPVDSFQQNFQNSYPKYCRRSSGCVIQDMPNGYSRVTWVEHAKVVEKPVHQIFSNYVYSGMAFGAQRWLGVLQRQCERVASLMARNISDLGVIPSPEARKSLMKLANRMIKTFSLNMTTCGGQSWTAISDSPEDTVRITTRKITEPGQPSGVILAAVSTTWLPYPHTKVFDLLRDERHRSQMDALSNGNSLNEVAHIANGSHPGNCISLLRINVASNSSQNVELMLQESCTDQSGSLVVYTTVDVDSVQLAMSGQDPSCIALLPQGFMIVPMVSSNADTSSEQGVTGTPSSTTSANAANSGCLLIMGMQVLASTIPSAKLNLSSVTAINNHLCNTLHQIEGALCSSTNNNCFVGSCNEPTTSAPSK