Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054596.t1 | XP_003604258.1 | 95.3 | 339 | 16 | 0 | 1 | 339 | 38 | 376 | 7.10E-180 | 639.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054596.t1 | P49243 | 71.3 | 341 | 93 | 2 | 1 | 338 | 65 | 403 | 1.2e-138 | 494.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054596.t1 | G7JEG5 | 95.3 | 339 | 16 | 0 | 1 | 339 | 38 | 376 | 5.1e-180 | 639.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene054596 | 0.806343 | 8.61E-50 | -1.69E-46 |
| MS.gene049382 | MS.gene054596 | 0.803954 | 2.72E-49 | -1.69E-46 |
| MS.gene050020 | MS.gene054596 | 0.817089 | 3.95E-52 | -1.69E-46 |
| MS.gene050584 | MS.gene054596 | 0.828621 | 8.12E-55 | -1.69E-46 |
| MS.gene050585 | MS.gene054596 | 0.82825 | 9.98E-55 | -1.69E-46 |
| MS.gene050586 | MS.gene054596 | 0.817631 | 2.98E-52 | -1.69E-46 |
| MS.gene050587 | MS.gene054596 | 0.817511 | 3.18E-52 | -1.69E-46 |
| MS.gene050762 | MS.gene054596 | 0.80614 | 9.51E-50 | -1.69E-46 |
| MS.gene050763 | MS.gene054596 | 0.807809 | 4.22E-50 | -1.69E-46 |
| MS.gene050807 | MS.gene054596 | 0.801214 | 1.00E-48 | -1.69E-46 |
| MS.gene051626 | MS.gene054596 | 0.857582 | 1.48E-62 | -1.69E-46 |
| MS.gene051789 | MS.gene054596 | 0.876443 | 1.39E-68 | -1.69E-46 |
| MS.gene052142 | MS.gene054596 | 0.812088 | 5.06E-51 | -1.69E-46 |
| MS.gene052698 | MS.gene054596 | 0.800813 | 1.21E-48 | -1.69E-46 |
| MS.gene052967 | MS.gene054596 | 0.830433 | 2.95E-55 | -1.69E-46 |
| MS.gene053074 | MS.gene054596 | 0.907002 | 8.10E-81 | -1.69E-46 |
| MS.gene053204 | MS.gene054596 | 0.892156 | 2.06E-74 | -1.69E-46 |
| MS.gene054184 | MS.gene054596 | 0.83688 | 7.22E-57 | -1.69E-46 |
| MS.gene054185 | MS.gene054596 | 0.837028 | 6.62E-57 | -1.69E-46 |
| MS.gene054214 | MS.gene054596 | 0.806152 | 9.45E-50 | -1.69E-46 |
| MS.gene054379 | MS.gene054596 | 0.808928 | 2.43E-50 | -1.69E-46 |
| MS.gene05456 | MS.gene054596 | 0.837903 | 3.95E-57 | -1.69E-46 |
| MS.gene054596 | MS.gene055207 | 0.821803 | 3.32E-53 | -1.69E-46 |
| MS.gene054596 | MS.gene055359 | 0.820703 | 5.96E-53 | -1.69E-46 |
| MS.gene054596 | MS.gene057750 | 0.804543 | 2.05E-49 | -1.69E-46 |
| MS.gene054596 | MS.gene057754 | 0.806837 | 6.77E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene058168 | 0.850059 | 2.17E-60 | -1.69E-46 |
| MS.gene054596 | MS.gene059006 | 0.875809 | 2.30E-68 | -1.69E-46 |
| MS.gene054596 | MS.gene059124 | 0.82331 | 1.48E-53 | -1.69E-46 |
| MS.gene054596 | MS.gene060476 | 0.816433 | 5.55E-52 | -1.69E-46 |
| MS.gene054596 | MS.gene060803 | 0.808848 | 2.53E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene060998 | 0.800716 | 1.26E-48 | -1.69E-46 |
| MS.gene054596 | MS.gene061336 | 0.836823 | 7.47E-57 | -1.69E-46 |
| MS.gene054596 | MS.gene061362 | 0.906131 | 2.06E-80 | -1.69E-46 |
| MS.gene054596 | MS.gene061879 | 0.807247 | 5.55E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene061880 | 0.809088 | 2.25E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene061893 | 0.818291 | 2.12E-52 | -1.69E-46 |
| MS.gene054596 | MS.gene061947 | 0.811072 | 8.40E-51 | -1.69E-46 |
| MS.gene054596 | MS.gene062354 | 0.840549 | 8.13E-58 | -1.69E-46 |
| MS.gene054596 | MS.gene062429 | 0.826586 | 2.50E-54 | -1.69E-46 |
| MS.gene054596 | MS.gene06339 | 0.836029 | 1.19E-56 | -1.69E-46 |
| MS.gene054596 | MS.gene06367 | 0.802553 | 5.31E-49 | -1.69E-46 |
| MS.gene054596 | MS.gene063807 | 0.803172 | 3.96E-49 | -1.69E-46 |
| MS.gene054596 | MS.gene064070 | 0.801179 | 1.02E-48 | -1.69E-46 |
| MS.gene054596 | MS.gene064944 | 0.832719 | 8.05E-56 | -1.69E-46 |
| MS.gene054596 | MS.gene065369 | 0.817393 | 3.37E-52 | -1.69E-46 |
| MS.gene054596 | MS.gene066337 | 0.809931 | 1.48E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene067305 | 0.851115 | 1.09E-60 | -1.69E-46 |
| MS.gene054596 | MS.gene067461 | 0.810371 | 1.19E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene068614 | 0.83377 | 4.41E-56 | -1.69E-46 |
| MS.gene054596 | MS.gene069147 | 0.814002 | 1.92E-51 | -1.69E-46 |
| MS.gene054596 | MS.gene06921 | 0.81188 | 5.61E-51 | -1.69E-46 |
| MS.gene054596 | MS.gene070594 | 0.836897 | 7.15E-57 | -1.69E-46 |
| MS.gene054596 | MS.gene070595 | 0.830818 | 2.37E-55 | -1.69E-46 |
| MS.gene054596 | MS.gene070597 | 0.819234 | 1.29E-52 | -1.69E-46 |
| MS.gene054596 | MS.gene07115 | 0.808789 | 2.61E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene072087 | -0.801376 | 9.27E-49 | -1.69E-46 |
| MS.gene054596 | MS.gene07344 | 0.808737 | 2.67E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene074096 | 0.8295 | 4.97E-55 | -1.69E-46 |
| MS.gene054596 | MS.gene074527 | 0.801012 | 1.10E-48 | -1.69E-46 |
| MS.gene054596 | MS.gene07942 | 0.870608 | 1.28E-66 | -1.69E-46 |
| MS.gene054596 | MS.gene07948 | 0.81274 | 3.64E-51 | -1.69E-46 |
| MS.gene054596 | MS.gene09860 | 0.808482 | 3.03E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene09868 | 0.816078 | 6.66E-52 | -1.69E-46 |
| MS.gene054596 | MS.gene20017 | 0.808297 | 3.32E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene20325 | 0.810547 | 1.09E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene20359 | 0.826894 | 2.11E-54 | -1.69E-46 |
| MS.gene054596 | MS.gene20988 | 0.827915 | 1.20E-54 | -1.69E-46 |
| MS.gene054596 | MS.gene22109 | 0.808206 | 3.47E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene22560 | 0.806804 | 6.89E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene22587 | 0.848214 | 7.07E-60 | -1.69E-46 |
| MS.gene054596 | MS.gene22852 | 0.81785 | 2.66E-52 | -1.69E-46 |
| MS.gene054596 | MS.gene22854 | 0.825204 | 5.32E-54 | -1.69E-46 |
| MS.gene054596 | MS.gene22855 | 0.828841 | 7.19E-55 | -1.69E-46 |
| MS.gene054596 | MS.gene22856 | 0.822183 | 2.71E-53 | -1.69E-46 |
| MS.gene054596 | MS.gene23012 | 0.877011 | 8.84E-69 | -1.69E-46 |
| MS.gene054596 | MS.gene23105 | 0.800221 | 1.60E-48 | -1.69E-46 |
| MS.gene054596 | MS.gene24039 | 0.850889 | 1.27E-60 | -1.69E-46 |
| MS.gene054596 | MS.gene24114 | 0.835055 | 2.10E-56 | -1.69E-46 |
| MS.gene054596 | MS.gene24546 | 0.839386 | 1.63E-57 | -1.69E-46 |
| MS.gene054596 | MS.gene25133 | 0.800352 | 1.50E-48 | -1.69E-46 |
| MS.gene054596 | MS.gene25229 | 0.830314 | 3.15E-55 | -1.69E-46 |
| MS.gene054596 | MS.gene25868 | 0.829761 | 4.30E-55 | -1.69E-46 |
| MS.gene054596 | MS.gene26076 | 0.811163 | 8.03E-51 | -1.69E-46 |
| MS.gene054596 | MS.gene27217 | 0.804646 | 1.95E-49 | -1.69E-46 |
| MS.gene054596 | MS.gene28341 | 0.832215 | 1.07E-55 | -1.69E-46 |
| MS.gene054596 | MS.gene29146 | 0.848022 | 7.99E-60 | -1.69E-46 |
| MS.gene054596 | MS.gene29449 | 0.820016 | 8.57E-53 | -1.69E-46 |
| MS.gene054596 | MS.gene29773 | 0.807091 | 5.99E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene29822 | 0.825321 | 5.00E-54 | -1.69E-46 |
| MS.gene054596 | MS.gene31254 | 0.809146 | 2.19E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene31359 | 0.816458 | 5.47E-52 | -1.69E-46 |
| MS.gene054596 | MS.gene31394 | 0.802468 | 5.53E-49 | -1.69E-46 |
| MS.gene054596 | MS.gene31604 | 0.822808 | 1.94E-53 | -1.69E-46 |
| MS.gene054596 | MS.gene32000 | 0.824227 | 9.05E-54 | -1.69E-46 |
| MS.gene054596 | MS.gene32978 | 0.841756 | 3.92E-58 | -1.69E-46 |
| MS.gene054596 | MS.gene33382 | 0.824688 | 7.05E-54 | -1.69E-46 |
| MS.gene054596 | MS.gene34106 | 0.83664 | 8.31E-57 | -1.69E-46 |
| MS.gene054596 | MS.gene35428 | 0.893132 | 8.35E-75 | -1.69E-46 |
| MS.gene054596 | MS.gene35514 | 0.802714 | 4.92E-49 | -1.69E-46 |
| MS.gene054596 | MS.gene35590 | 0.811094 | 8.31E-51 | -1.69E-46 |
| MS.gene054596 | MS.gene35592 | 0.825431 | 4.71E-54 | -1.69E-46 |
| MS.gene054596 | MS.gene35695 | 0.882421 | 1.06E-70 | -1.69E-46 |
| MS.gene054596 | MS.gene38528 | 0.85146 | 8.75E-61 | -1.69E-46 |
| MS.gene054596 | MS.gene38772 | 0.842832 | 2.03E-58 | -1.69E-46 |
| MS.gene054596 | MS.gene39152 | 0.802732 | 4.88E-49 | -1.69E-46 |
| MS.gene054596 | MS.gene39496 | 0.811355 | 7.30E-51 | -1.69E-46 |
| MS.gene054596 | MS.gene40751 | 0.80156 | 8.50E-49 | -1.69E-46 |
| MS.gene054596 | MS.gene40923 | 0.80068 | 1.29E-48 | -1.69E-46 |
| MS.gene054596 | MS.gene40950 | 0.814291 | 1.66E-51 | -1.69E-46 |
| MS.gene054596 | MS.gene41839 | 0.852554 | 4.28E-61 | -1.69E-46 |
| MS.gene054596 | MS.gene41915 | 0.830594 | 2.69E-55 | -1.69E-46 |
| MS.gene054596 | MS.gene42679 | 0.830093 | 3.57E-55 | -1.69E-46 |
| MS.gene054596 | MS.gene43899 | 0.802055 | 6.73E-49 | -1.69E-46 |
| MS.gene054596 | MS.gene45085 | 0.850059 | 2.17E-60 | -1.69E-46 |
| MS.gene054596 | MS.gene45403 | 0.808915 | 2.45E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene45439 | 0.822667 | 2.10E-53 | -1.69E-46 |
| MS.gene054596 | MS.gene46110 | 0.800071 | 1.71E-48 | -1.69E-46 |
| MS.gene054596 | MS.gene47141 | 0.814461 | 1.52E-51 | -1.69E-46 |
| MS.gene054596 | MS.gene47283 | 0.842778 | 2.10E-58 | -1.69E-46 |
| MS.gene054596 | MS.gene48577 | 0.835693 | 1.45E-56 | -1.69E-46 |
| MS.gene054596 | MS.gene49304 | 0.812549 | 4.01E-51 | -1.69E-46 |
| MS.gene054596 | MS.gene49634 | 0.808932 | 2.43E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene49839 | 0.818434 | 1.96E-52 | -1.69E-46 |
| MS.gene054596 | MS.gene50621 | 0.826408 | 2.76E-54 | -1.69E-46 |
| MS.gene054596 | MS.gene52365 | 0.811357 | 7.29E-51 | -1.69E-46 |
| MS.gene054596 | MS.gene53244 | 0.801425 | 9.06E-49 | -1.69E-46 |
| MS.gene054596 | MS.gene53287 | 0.819982 | 8.72E-53 | -1.69E-46 |
| MS.gene054596 | MS.gene53305 | 0.82178 | 3.37E-53 | -1.69E-46 |
| MS.gene054596 | MS.gene53586 | 0.830042 | 3.67E-55 | -1.69E-46 |
| MS.gene054596 | MS.gene54020 | 0.822181 | 2.72E-53 | -1.69E-46 |
| MS.gene054596 | MS.gene54407 | 0.809548 | 1.79E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene54871 | 0.805271 | 1.45E-49 | -1.69E-46 |
| MS.gene054596 | MS.gene55625 | 0.840429 | 8.74E-58 | -1.69E-46 |
| MS.gene054596 | MS.gene56053 | 0.807214 | 5.64E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene56057 | 0.827654 | 1.39E-54 | -1.69E-46 |
| MS.gene054596 | MS.gene56179 | 0.810321 | 1.22E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene57222 | 0.840682 | 7.51E-58 | -1.69E-46 |
| MS.gene054596 | MS.gene57643 | 0.804127 | 2.51E-49 | -1.69E-46 |
| MS.gene054596 | MS.gene58270 | 0.807477 | 4.96E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene58532 | 0.805507 | 1.29E-49 | -1.69E-46 |
| MS.gene054596 | MS.gene59372 | 0.817203 | 3.72E-52 | -1.69E-46 |
| MS.gene054596 | MS.gene59949 | 0.807537 | 4.81E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene61586 | 0.822898 | 1.85E-53 | -1.69E-46 |
| MS.gene054596 | MS.gene62393 | 0.800344 | 1.51E-48 | -1.69E-46 |
| MS.gene054596 | MS.gene62594 | 0.844918 | 5.61E-59 | -1.69E-46 |
| MS.gene054596 | MS.gene62682 | 0.808011 | 3.82E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene62720 | 0.884064 | 2.64E-71 | -1.69E-46 |
| MS.gene054596 | MS.gene64051 | 0.806556 | 7.77E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene64052 | 0.80977 | 1.61E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene64101 | 0.808197 | 3.49E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene64249 | 0.802208 | 6.26E-49 | -1.69E-46 |
| MS.gene054596 | MS.gene64425 | 0.826578 | 2.51E-54 | -1.69E-46 |
| MS.gene054596 | MS.gene65399 | 0.989013 | 2.49E-176 | -1.69E-46 |
| MS.gene054596 | MS.gene65661 | 0.814555 | 1.45E-51 | -1.69E-46 |
| MS.gene054596 | MS.gene66714 | 0.800167 | 1.64E-48 | -1.69E-46 |
| MS.gene054596 | MS.gene66736 | 0.814928 | 1.20E-51 | -1.69E-46 |
| MS.gene054596 | MS.gene67002 | 0.817477 | 3.23E-52 | -1.69E-46 |
| MS.gene054596 | MS.gene67384 | 0.811017 | 8.64E-51 | -1.69E-46 |
| MS.gene054596 | MS.gene68975 | 0.81206 | 5.13E-51 | -1.69E-46 |
| MS.gene054596 | MS.gene69587 | 0.806581 | 7.67E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene70021 | 0.817411 | 3.34E-52 | -1.69E-46 |
| MS.gene054596 | MS.gene71468 | 0.815661 | 8.25E-52 | -1.69E-46 |
| MS.gene054596 | MS.gene71773 | 0.807613 | 4.64E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene72268 | 0.801032 | 1.09E-48 | -1.69E-46 |
| MS.gene054596 | MS.gene73229 | 0.812944 | 3.29E-51 | -1.69E-46 |
| MS.gene054596 | MS.gene73257 | 0.805268 | 1.45E-49 | -1.69E-46 |
| MS.gene054596 | MS.gene74980 | 0.82073 | 5.88E-53 | -1.69E-46 |
| MS.gene054596 | MS.gene75321 | 0.871793 | 5.21E-67 | -1.69E-46 |
| MS.gene054596 | MS.gene75494 | 0.807798 | 4.24E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene75655 | 0.820227 | 7.67E-53 | -1.69E-46 |
| MS.gene054596 | MS.gene76705 | 0.80668 | 7.31E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene80842 | 0.818146 | 2.28E-52 | -1.69E-46 |
| MS.gene054596 | MS.gene80996 | 0.810201 | 1.30E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene81958 | 0.805958 | 1.04E-49 | -1.69E-46 |
| MS.gene054596 | MS.gene82214 | 0.839526 | 1.50E-57 | -1.69E-46 |
| MS.gene054596 | MS.gene82571 | 0.824731 | 6.89E-54 | -1.69E-46 |
| MS.gene054596 | MS.gene82810 | 0.893222 | 7.68E-75 | -1.69E-46 |
| MS.gene054596 | MS.gene83221 | 0.822262 | 2.60E-53 | -1.69E-46 |
| MS.gene054596 | MS.gene84726 | 0.811258 | 7.66E-51 | -1.69E-46 |
| MS.gene054596 | MS.gene84833 | 0.852215 | 5.34E-61 | -1.69E-46 |
| MS.gene054596 | MS.gene84951 | 0.807137 | 5.85E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene86109 | 0.804742 | 1.87E-49 | -1.69E-46 |
| MS.gene054596 | MS.gene86114 | 0.831907 | 1.28E-55 | -1.69E-46 |
| MS.gene054596 | MS.gene86236 | 0.812104 | 5.01E-51 | -1.69E-46 |
| MS.gene054596 | MS.gene86987 | 0.814227 | 1.72E-51 | -1.69E-46 |
| MS.gene054596 | MS.gene87804 | 0.822071 | 2.88E-53 | -1.69E-46 |
| MS.gene054596 | MS.gene87897 | 0.806436 | 8.23E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene88960 | 0.808068 | 3.71E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene89207 | 0.82511 | 5.60E-54 | -1.69E-46 |
| MS.gene054596 | MS.gene89326 | 0.804447 | 2.15E-49 | -1.69E-46 |
| MS.gene054596 | MS.gene89327 | 0.800682 | 1.29E-48 | -1.69E-46 |
| MS.gene054596 | MS.gene89630 | 0.808773 | 2.63E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene90015 | 0.813017 | 3.17E-51 | -1.69E-46 |
| MS.gene054596 | MS.gene91522 | 0.804786 | 1.83E-49 | -1.69E-46 |
| MS.gene054596 | MS.gene91762 | 0.819618 | 1.06E-52 | -1.69E-46 |
| MS.gene054596 | MS.gene91805 | 0.809518 | 1.82E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene92551 | 0.813699 | 2.24E-51 | -1.69E-46 |
| MS.gene054596 | MS.gene92590 | 0.804078 | 2.57E-49 | -1.69E-46 |
| MS.gene054596 | MS.gene92929 | 0.806804 | 6.88E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene93760 | 0.802619 | 5.15E-49 | -1.69E-46 |
| MS.gene054596 | MS.gene95739 | 0.812994 | 3.20E-51 | -1.69E-46 |
| MS.gene054596 | MS.gene96021 | 0.822475 | 2.32E-53 | -1.69E-46 |
| MS.gene054596 | MS.gene96024 | 0.800332 | 1.51E-48 | -1.69E-46 |
| MS.gene054596 | MS.gene96503 | 0.845554 | 3.78E-59 | -1.69E-46 |
| MS.gene054596 | MS.gene96507 | 0.804741 | 1.87E-49 | -1.69E-46 |
| MS.gene054596 | MS.gene97737 | 0.802494 | 5.46E-49 | -1.69E-46 |
| MS.gene054596 | MS.gene98318 | 0.831488 | 1.62E-55 | -1.69E-46 |
| MS.gene054596 | MS.gene98792 | 0.814086 | 1.84E-51 | -1.69E-46 |
| MS.gene054596 | MS.gene98837 | 0.811234 | 7.75E-51 | -1.69E-46 |
| MS.gene054596 | MS.gene99735 | 0.830536 | 2.78E-55 | -1.69E-46 |
| MS.gene054596 | MS.gene99922 | 0.80386 | 2.85E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 65 sgRNAs with CRISPR-Local
Find 165 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTAAACGTCGAGTTCTTTC+AGG | 0.225004 | 4.1:+88230027 | MS.gene054596:CDS |
| CATGAATATGAATACTTCTT+TGG | 0.249673 | 4.1:-88231997 | None:intergenic |
| CCACTACATCAATAATTCTT+TGG | 0.266849 | 4.1:-88232308 | None:intergenic |
| ATTATTGCTGCTTCTGGCTT+TGG | 0.274041 | 4.1:+88232459 | MS.gene054596:CDS |
| TAATGCATCAGACTCAATTA+AGG | 0.282247 | 4.1:+88231957 | MS.gene054596:CDS |
| AGTTAGAAGTGGAAAGATTA+AGG | 0.293816 | 4.1:+88232428 | MS.gene054596:CDS |
| GGACAAATTATTGCTGCTTC+TGG | 0.294045 | 4.1:+88232453 | MS.gene054596:CDS |
| GCTTTGGTGCTGGTCTTACT+TGG | 0.297418 | 4.1:+88232475 | MS.gene054596:CDS |
| TTTCAAAATGTTCTTGTAAT+CGG | 0.300523 | 4.1:+88231337 | MS.gene054596:CDS |
| GCATGTAGTGGATTTATCTT+TGG | 0.313034 | 4.1:+88231194 | MS.gene054596:CDS |
| TATCAGCTGCTAGTCACATT+AGG | 0.325626 | 4.1:+88231222 | MS.gene054596:CDS |
| ATCAGCTGCTAGTCACATTA+GGG | 0.332459 | 4.1:+88231223 | MS.gene054596:CDS |
| ATATCAAATGTGGCTGATTA+TGG | 0.349357 | 4.1:+88232363 | MS.gene054596:CDS |
| AGAAGTTCATGTATTCTGTT+TGG | 0.357805 | 4.1:+88231397 | MS.gene054596:CDS |
| GCTGCTTCTGGCTTTGGTGC+TGG | 0.385323 | 4.1:+88232465 | MS.gene054596:CDS |
| CTTTGGTGCTGGTCTTACTT+GGG | 0.392366 | 4.1:+88232476 | MS.gene054596:CDS |
| TGACTTTGGCACACTCTGTA+TGG | 0.403255 | 4.1:-88232055 | None:intergenic |
| CTCTTTCGAGATATATCGAT+TGG | 0.434773 | 4.1:+88231368 | MS.gene054596:CDS |
| GAATATGAATACTTCTTTGG+AGG | 0.473078 | 4.1:-88231994 | None:intergenic |
| TAGTTGATACTTCTGATGAA+TGG | 0.482232 | 4.1:+88229983 | MS.gene054596:CDS |
| TGCTGCCTCTACTGATAAAG+TGG | 0.490848 | 4.1:-88230776 | None:intergenic |
| AATGCATCAGACTCAATTAA+GGG | 0.492850 | 4.1:+88231958 | MS.gene054596:CDS |
| GCTGTAATGTTATAAGCTGC+TGG | 0.494699 | 4.1:-88231170 | None:intergenic |
| TAGATGAACACACCAAGATT+AGG | 0.495759 | 4.1:-88230843 | None:intergenic |
| TGACTGGTTACTTCTCCATC+AGG | 0.499458 | 4.1:+88232122 | MS.gene054596:CDS |
| AGTGCTGACTCAATTGACTT+TGG | 0.500820 | 4.1:-88232069 | None:intergenic |
| AGAAGTGGAAAGATTAAGGA+AGG | 0.501824 | 4.1:+88232432 | MS.gene054596:CDS |
| CCAAAGAATTATTGATGTAG+TGG | 0.502244 | 4.1:+88232308 | MS.gene054596:CDS |
| TACCTGCATCCAGCATTGAC+TGG | 0.503751 | 4.1:+88232106 | MS.gene054596:CDS |
| TTTCAGATTTCAAAACAGCT+TGG | 0.504851 | 4.1:+88231134 | MS.gene054596:intron |
| AATTGAGTCAGCACTTCAAA+AGG | 0.505835 | 4.1:+88232077 | MS.gene054596:CDS |
| AATGCAGCATATAAAGAAGA+AGG | 0.507598 | 4.1:+88231928 | MS.gene054596:CDS |
| GAGAAGTAACCAGTCAATGC+TGG | 0.509382 | 4.1:-88232115 | None:intergenic |
| TTTGGTGCTGGTCTTACTTG+GGG | 0.514017 | 4.1:+88232477 | MS.gene054596:CDS |
| AACCAGTCAATGCTGGATGC+AGG | 0.515256 | 4.1:-88232108 | None:intergenic |
| TATTCATGCATACATATGAA+TGG | 0.524043 | 4.1:+88232012 | MS.gene054596:CDS |
| AAGTGCAGCTTCCATTCCAT+TGG | 0.525636 | 4.1:+88232392 | MS.gene054596:CDS |
| GGCTGCAAGCTGGTAGGATG+TGG | 0.526765 | 4.1:+88229913 | MS.gene054596:CDS |
| CTTTGCAGACTTGTTAGTCA+AGG | 0.528713 | 4.1:+88229892 | None:intergenic |
| AACTCGACGTTTACGAATCC+CGG | 0.530634 | 4.1:-88230019 | None:intergenic |
| AACATTACAGCTGCATGTAG+TGG | 0.532984 | 4.1:+88231182 | MS.gene054596:CDS |
| ATTCTGTTTGGAGATGCTGC+TGG | 0.537982 | 4.1:+88231409 | MS.gene054596:CDS |
| GAGATGGCAAAGGTTGATCC+AGG | 0.538042 | 4.1:+88230811 | MS.gene054596:CDS |
| TGCTGGTGCTGTTCTAGTAC+AGG | 0.539004 | 4.1:+88231426 | MS.gene054596:CDS |
| TCATTAGTAATCTCAAGAGT+TGG | 0.547090 | 4.1:-88229946 | None:intergenic |
| GAGTCAGCACTTCAAAAGGC+TGG | 0.548884 | 4.1:+88232081 | MS.gene054596:CDS |
| TTAGATGAATCAGTTAGAAG+TGG | 0.549460 | 4.1:+88232417 | MS.gene054596:CDS |
| ACTGATTCATCTAAAGCCAA+TGG | 0.554412 | 4.1:-88232408 | None:intergenic |
| TTCATCTAAAGCCAATGGAA+TGG | 0.563272 | 4.1:-88232403 | None:intergenic |
| CTTGACCACTTTATCAGTAG+AGG | 0.564880 | 4.1:+88230771 | MS.gene054596:CDS |
| AATGGATAAGTGTTCGCACC+GGG | 0.577062 | 4.1:+88230001 | MS.gene054596:CDS |
| AGGTGATGTTGACCTAATCT+TGG | 0.581165 | 4.1:+88230831 | MS.gene054596:CDS |
| GAATGGATAAGTGTTCGCAC+CGG | 0.581811 | 4.1:+88230000 | MS.gene054596:CDS |
| ATGCAGCATATAAAGAAGAA+GGG | 0.586575 | 4.1:+88231929 | MS.gene054596:CDS |
| CTTTATCAGTAGAGGCAGCA+AGG | 0.593587 | 4.1:+88230779 | MS.gene054596:CDS |
| TGTTAGTCAAGGCTGCAAGC+TGG | 0.594953 | 4.1:+88229903 | MS.gene054596:CDS |
| AGTCAAGGCTGCAAGCTGGT+AGG | 0.597236 | 4.1:+88229907 | MS.gene054596:CDS |
| AAGATTAGGTCAACATCACC+TGG | 0.602574 | 4.1:-88230829 | None:intergenic |
| TGCAGCATATAAAGAAGAAG+GGG | 0.606045 | 4.1:+88231930 | MS.gene054596:CDS |
| CAGAATACATGAACTTCTGT+CGG | 0.609245 | 4.1:-88231392 | None:intergenic |
| AGCAAGGAAAGCTCTTGAGA+TGG | 0.614431 | 4.1:+88230795 | MS.gene054596:CDS |
| GATTTGAATAGTGATGGTGA+TGG | 0.616422 | 4.1:+88231674 | MS.gene054596:CDS |
| TCAGCTGCTAGTCACATTAG+GGG | 0.630404 | 4.1:+88231224 | MS.gene054596:CDS |
| GAAAGCTCTTGAGATGGCAA+AGG | 0.633878 | 4.1:+88230801 | MS.gene054596:CDS |
| ATTGCAGGCGTGCAACTACG+AGG | 0.723991 | 4.1:+88231631 | MS.gene054596:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTATTTACAACATTT+AGG | - | chr4.1:88231292-88231311 | None:intergenic | 10.0% |
| !! | ATATAGTAATATATTTGATT+AGG | + | chr4.1:88232223-88232242 | MS.gene054596:intron | 10.0% |
| !! | TAATCAAATATATTACTATA+TGG | - | chr4.1:88232224-88232243 | None:intergenic | 10.0% |
| !! | TATAGTAATATATTTGATTA+GGG | + | chr4.1:88232224-88232243 | MS.gene054596:intron | 10.0% |
| !!! | CTTTTTACTTATATAAAAAT+TGG | - | chr4.1:88230952-88230971 | None:intergenic | 10.0% |
| !!! | TTAATCATAAAAAAAAGTTT+TGG | - | chr4.1:88232184-88232203 | None:intergenic | 10.0% |
| !!! | AAGTAAAAAGTACATATATA+TGG | + | chr4.1:88230962-88230981 | MS.gene054596:intron | 15.0% |
| !!! | AATTTAGGGAAATTTATTTT+TGG | - | chr4.1:88232154-88232173 | None:intergenic | 15.0% |
| !!! | TATTTTCATTGAGATTTAAA+TGG | + | chr4.1:88231557-88231576 | MS.gene054596:intron | 15.0% |
| !! | ATATATTTGATTAGGGAAAA+AGG | + | chr4.1:88232231-88232250 | MS.gene054596:intron | 20.0% |
| !! | GAAGAAAAAAAAATGTAGTT+TGG | - | chr4.1:88230363-88230382 | None:intergenic | 20.0% |
| !! | TAAATACTGAATTATTAGCA+TGG | - | chr4.1:88232266-88232285 | None:intergenic | 20.0% |
| !! | TATATATCCAATGTCTTATA+AGG | + | chr4.1:88230617-88230636 | MS.gene054596:intron | 20.0% |
| !! | TTTCAAAATGTTCTTGTAAT+CGG | + | chr4.1:88231337-88231356 | MS.gene054596:CDS | 20.0% |
| !!! | AAATTGTTTTGAGATATTGT+TGG | + | chr4.1:88230175-88230194 | MS.gene054596:intron | 20.0% |
| !!! | AGTTACTTTTTGTTGAATTA+AGG | + | chr4.1:88231255-88231274 | MS.gene054596:intron | 20.0% |
| !!! | ATCAGTTGATAATATAAGTT+TGG | - | chr4.1:88230419-88230438 | None:intergenic | 20.0% |
| !!! | ATTCACATTTTCATCTAATA+TGG | - | chr4.1:88230570-88230589 | None:intergenic | 20.0% |
| !!! | ATTTACTTGTTGATAAATGT+AGG | + | chr4.1:88232281-88232300 | MS.gene054596:intron | 20.0% |
| !!! | GGTTTTTTATATAAGCAAAA+AGG | - | chr4.1:88230997-88231016 | None:intergenic | 20.0% |
| !!! | TAATAGTTCAGTTTAGTTTT+CGG | + | chr4.1:88230504-88230523 | MS.gene054596:intron | 20.0% |
| !!! | TTCACATTTTCATCTAATAT+GGG | - | chr4.1:88230569-88230588 | None:intergenic | 20.0% |
| !!! | TTTTGCTTATATAAAAAACC+AGG | + | chr4.1:88230997-88231016 | MS.gene054596:intron | 20.0% |
| !!! | TTTTTTCATTTTATGAATGC+AGG | + | chr4.1:88231307-88231326 | MS.gene054596:intron | 20.0% |
| ! | AAATTGAACCAAATCGTTAA+TGG | + | chr4.1:88230304-88230323 | MS.gene054596:intron | 25.0% |
| ! | AGAAAAAGTGATATCAAATG+TGG | + | chr4.1:88232353-88232372 | MS.gene054596:CDS | 25.0% |
| ! | ATCCTCATTATTACACTAAT+AGG | - | chr4.1:88230232-88230251 | None:intergenic | 25.0% |
| ! | CAATTTCTTCTACATACTTA+TGG | - | chr4.1:88230161-88230180 | None:intergenic | 25.0% |
| ! | CATGAATATGAATACTTCTT+TGG | - | chr4.1:88232000-88232019 | None:intergenic | 25.0% |
| ! | CGTAAACATCATAAATAGAA+TGG | + | chr4.1:88230072-88230091 | MS.gene054596:intron | 25.0% |
| ! | GTTATATATGTTTACATTGC+AGG | + | chr4.1:88231616-88231635 | MS.gene054596:intron | 25.0% |
| ! | TATGATGAAAACCATAAACA+TGG | - | chr4.1:88231500-88231519 | None:intergenic | 25.0% |
| ! | TATTCATGCATACATATGAA+TGG | + | chr4.1:88232012-88232031 | MS.gene054596:CDS | 25.0% |
| ! | TCTTACTCACATTTATTACT+AGG | - | chr4.1:88230543-88230562 | None:intergenic | 25.0% |
| ! | TTAATGTAATCACATATCAC+CGG | - | chr4.1:88231756-88231775 | None:intergenic | 25.0% |
| !! | ATTCTGTTTTCAATTGTTGA+TGG | + | chr4.1:88230205-88230224 | MS.gene054596:intron | 25.0% |
| !! | GGTTTTCATCATAGTAAATA+GGG | + | chr4.1:88231507-88231526 | MS.gene054596:intron | 25.0% |
| !! | GTTTTCTCTAAATATAGTTC+TGG | - | chr4.1:88230341-88230360 | None:intergenic | 25.0% |
| !! | TGGTTTTCATCATAGTAAAT+AGG | + | chr4.1:88231506-88231525 | MS.gene054596:intron | 25.0% |
| !! | TTCTGTTTTCAATTGTTGAT+GGG | + | chr4.1:88230206-88230225 | MS.gene054596:intron | 25.0% |
| !! | TTGATTTTGCTTGATGTTTA+TGG | + | chr4.1:88230732-88230751 | MS.gene054596:intron | 25.0% |
| !!! | AATAGTTCAGTTTAGTTTTC+GGG | + | chr4.1:88230505-88230524 | MS.gene054596:intron | 25.0% |
| !!! | ACATTTGATATCACTTTTTC+TGG | - | chr4.1:88232354-88232373 | None:intergenic | 25.0% |
| !!! | AGTTTTGATTTGAATAGTGA+TGG | + | chr4.1:88231668-88231687 | MS.gene054596:CDS | 25.0% |
| !!! | AGTTTTGGTCACTTAAATTT+AGG | - | chr4.1:88232169-88232188 | None:intergenic | 25.0% |
| !!! | CTATATGGTATATCACTTTT+AGG | - | chr4.1:88232209-88232228 | None:intergenic | 25.0% |
| !!! | GTTTTGGTCACTTAAATTTA+GGG | - | chr4.1:88232168-88232187 | None:intergenic | 25.0% |
| !!! | TGAATTGAATTTGGCTTTTA+TGG | + | chr4.1:88230102-88230121 | MS.gene054596:intron | 25.0% |
| AAATCAAGTCAAACCTTGTT+AGG | - | chr4.1:88230719-88230738 | None:intergenic | 30.0% | |
| AATCAAGTCAAACCTTGTTA+GGG | - | chr4.1:88230718-88230737 | None:intergenic | 30.0% | |
| AATGAGGATTGTTCATGATT+CGG | + | chr4.1:88230243-88230262 | MS.gene054596:intron | 30.0% | |
| AATGCAGCATATAAAGAAGA+AGG | + | chr4.1:88231928-88231947 | MS.gene054596:CDS | 30.0% | |
| AATGCATCAGACTCAATTAA+GGG | + | chr4.1:88231958-88231977 | MS.gene054596:CDS | 30.0% | |
| AGAAGTTCATGTATTCTGTT+TGG | + | chr4.1:88231397-88231416 | MS.gene054596:CDS | 30.0% | |
| AGTTAGAAGTGGAAAGATTA+AGG | + | chr4.1:88232428-88232447 | MS.gene054596:CDS | 30.0% | |
| ATATCAAATGTGGCTGATTA+TGG | + | chr4.1:88232363-88232382 | MS.gene054596:CDS | 30.0% | |
| ATGCAGCATATAAAGAAGAA+GGG | + | chr4.1:88231929-88231948 | MS.gene054596:CDS | 30.0% | |
| ATTTGATTAGGGAAAAAGGT+TGG | + | chr4.1:88232235-88232254 | MS.gene054596:intron | 30.0% | |
| CCAAAGAATTATTGATGTAG+TGG | + | chr4.1:88232308-88232327 | MS.gene054596:CDS | 30.0% | |
| CCACTACATCAATAATTCTT+TGG | - | chr4.1:88232311-88232330 | None:intergenic | 30.0% | |
| CTGAAATGATTCTATGTGAA+CGG | + | chr4.1:88230386-88230405 | MS.gene054596:intron | 30.0% | |
| GAATATGAATACTTCTTTGG+AGG | - | chr4.1:88231997-88232016 | None:intergenic | 30.0% | |
| TAATGCATCAGACTCAATTA+AGG | + | chr4.1:88231957-88231976 | MS.gene054596:CDS | 30.0% | |
| TCATTAGTAATCTCAAGAGT+TGG | - | chr4.1:88229949-88229968 | None:intergenic | 30.0% | |
| TCTACATACTTATGGAAACA+TGG | - | chr4.1:88230153-88230172 | None:intergenic | 30.0% | |
| TTAGATGAATCAGTTAGAAG+TGG | + | chr4.1:88232417-88232436 | MS.gene054596:CDS | 30.0% | |
| TTTCAGATTTCAAAACAGCT+TGG | + | chr4.1:88231134-88231153 | MS.gene054596:intron | 30.0% | |
| ! | ATATAAGCAAAAAGGTGCAT+TGG | - | chr4.1:88230989-88231008 | None:intergenic | 30.0% |
| ! | TAAGGTTTCAGGTAAAAATG+TGG | + | chr4.1:88230635-88230654 | MS.gene054596:intron | 30.0% |
| ! | TAGTTGATACTTCTGATGAA+TGG | + | chr4.1:88229983-88230002 | MS.gene054596:CDS | 30.0% |
| ! | TCTACTTCAGATGATCTTTT+TGG | + | chr4.1:88230862-88230881 | MS.gene054596:CDS | 30.0% |
| !! | CTAAATATAGTTCTGGTTCA+GGG | - | chr4.1:88230334-88230353 | None:intergenic | 30.0% |
| !! | TCTAAATATAGTTCTGGTTC+AGG | - | chr4.1:88230335-88230354 | None:intergenic | 30.0% |
| !!! | TTGATATCACTTTTTCTGGA+GGG | - | chr4.1:88232350-88232369 | None:intergenic | 30.0% |
| !!! | TTTGATATCACTTTTTCTGG+AGG | - | chr4.1:88232351-88232370 | None:intergenic | 30.0% |
| AATTGAGTCAGCACTTCAAA+AGG | + | chr4.1:88232077-88232096 | MS.gene054596:CDS | 35.0% | |
| ACACCAAAGAATCATAACTC+TGG | - | chr4.1:88230680-88230699 | None:intergenic | 35.0% | |
| ACCAAACCATTGTAACAGTT+CGG | - | chr4.1:88230283-88230302 | None:intergenic | 35.0% | |
| ACCAAAGAATCATAACTCTG+GGG | - | chr4.1:88230678-88230697 | None:intergenic | 35.0% | |
| ACCATAGTTTCACTTCATGT+AGG | + | chr4.1:88231899-88231918 | MS.gene054596:intron | 35.0% | |
| AGAAAACCGAACTGTTACAA+TGG | + | chr4.1:88230274-88230293 | MS.gene054596:intron | 35.0% | |
| AGAAGTGGAAAGATTAAGGA+AGG | + | chr4.1:88232432-88232451 | MS.gene054596:CDS | 35.0% | |
| CACCAAAGAATCATAACTCT+GGG | - | chr4.1:88230679-88230698 | None:intergenic | 35.0% | |
| CAGAATACATGAACTTCTGT+CGG | - | chr4.1:88231395-88231414 | None:intergenic | 35.0% | |
| CCAATGTCTTATAAGGTTTC+AGG | + | chr4.1:88230624-88230643 | MS.gene054596:intron | 35.0% | |
| CCTGAAACCTTATAAGACAT+TGG | - | chr4.1:88230627-88230646 | None:intergenic | 35.0% | |
| CTATAACCAATACTAACCTG+AGG | - | chr4.1:88230895-88230914 | None:intergenic | 35.0% | |
| CTCTTTCGAGATATATCGAT+TGG | + | chr4.1:88231368-88231387 | MS.gene054596:CDS | 35.0% | |
| GGCCTATTAGTGTAATAATG+AGG | + | chr4.1:88230227-88230246 | MS.gene054596:intron | 35.0% | |
| GGCTAACTATACCATGTTTA+TGG | + | chr4.1:88231486-88231505 | MS.gene054596:intron | 35.0% | |
| GGTTACAGCTGAATTGAATT+TGG | + | chr4.1:88230093-88230112 | MS.gene054596:intron | 35.0% | |
| TAGAAATGTCGATACTGCAA+AGG | - | chr4.1:88231720-88231739 | None:intergenic | 35.0% | |
| TAGATGAACACACCAAGATT+AGG | - | chr4.1:88230846-88230865 | None:intergenic | 35.0% | |
| TGCAGCATATAAAGAAGAAG+GGG | + | chr4.1:88231930-88231949 | MS.gene054596:CDS | 35.0% | |
| TTGATCAGTTCGTGAACTAT+CGG | + | chr4.1:88230445-88230464 | MS.gene054596:intron | 35.0% | |
| ! | AACAGTTCGGTTTTCTTTCT+TGG | - | chr4.1:88230270-88230289 | None:intergenic | 35.0% |
| ! | ACTGATTCATCTAAAGCCAA+TGG | - | chr4.1:88232411-88232430 | None:intergenic | 35.0% |
| ! | GATTTGAATAGTGATGGTGA+TGG | + | chr4.1:88231674-88231693 | MS.gene054596:CDS | 35.0% |
| ! | GTATCGACATTTCTAATCGA+AGG | + | chr4.1:88231725-88231744 | MS.gene054596:intron | 35.0% |
| ! | TTCATCTAAAGCCAATGGAA+TGG | - | chr4.1:88232406-88232425 | None:intergenic | 35.0% |
| !! | AAGCACTGACACATATACAT+TGG | - | chr4.1:88231832-88231851 | None:intergenic | 35.0% |
| !! | ACTTTTGTTTGTCAACACTG+AGG | - | chr4.1:88231466-88231485 | None:intergenic | 35.0% |
| !! | CTCAGGTTAGTATTGGTTAT+AGG | + | chr4.1:88230893-88230912 | MS.gene054596:intron | 35.0% |
| !! | GCATGTAGTGGATTTATCTT+TGG | + | chr4.1:88231194-88231213 | MS.gene054596:CDS | 35.0% |
| !! | TCAGTGTTGACAAACAAAAG+TGG | + | chr4.1:88231465-88231484 | MS.gene054596:intron | 35.0% |
| !!! | GGATCAGCTATTTTTCAATG+GGG | + | chr4.1:88232498-88232517 | MS.gene054596:CDS | 35.0% |
| !!! | GGGATCAGCTATTTTTCAAT+GGG | + | chr4.1:88232497-88232516 | MS.gene054596:CDS | 35.0% |
| !!! | TATTTTTGGTCCTTACCTGA+TGG | - | chr4.1:88232140-88232159 | None:intergenic | 35.0% |
| !!! | TGAATTTGGCTTTTATGGAG+TGG | + | chr4.1:88230107-88230126 | MS.gene054596:intron | 35.0% |
| AACATTACAGCTGCATGTAG+TGG | + | chr4.1:88231182-88231201 | MS.gene054596:CDS | 40.0% | |
| AAGATTAGGTCAACATCACC+TGG | - | chr4.1:88230832-88230851 | None:intergenic | 40.0% | |
| ACCGAACTGTTACAATGGTT+TGG | + | chr4.1:88230279-88230298 | MS.gene054596:intron | 40.0% | |
| AGGTGATGTTGACCTAATCT+TGG | + | chr4.1:88230831-88230850 | MS.gene054596:CDS | 40.0% | |
| AGTTTCTCTCTTCCCTAACA+AGG | + | chr4.1:88230703-88230722 | MS.gene054596:intron | 40.0% | |
| AGTTTCTGCAATGTACTTCC+TGG | - | chr4.1:88231018-88231037 | None:intergenic | 40.0% | |
| ATCAGCTGCTAGTCACATTA+GGG | + | chr4.1:88231223-88231242 | MS.gene054596:CDS | 40.0% | |
| ATGTCGATACTGCAAAGGTA+AGG | - | chr4.1:88231715-88231734 | None:intergenic | 40.0% | |
| CTTGACCACTTTATCAGTAG+AGG | + | chr4.1:88230771-88230790 | MS.gene054596:CDS | 40.0% | |
| GCCTACATGAAGTGAAACTA+TGG | - | chr4.1:88231903-88231922 | None:intergenic | 40.0% | |
| GCTGTAATGTTATAAGCTGC+TGG | - | chr4.1:88231173-88231192 | None:intergenic | 40.0% | |
| GTGAACTATCGGTCATAGTT+CGG | + | chr4.1:88230456-88230475 | MS.gene054596:intron | 40.0% | |
| TATCAGCTGCTAGTCACATT+AGG | + | chr4.1:88231222-88231241 | MS.gene054596:CDS | 40.0% | |
| TGCTTGATGTTTATGGTTGC+AGG | + | chr4.1:88230739-88230758 | MS.gene054596:intron | 40.0% | |
| TTGATGTTTATGGTTGCAGG+TGG | + | chr4.1:88230742-88230761 | MS.gene054596:intron | 40.0% | |
| TTGTTTGTCAACACTGAGGA+AGG | - | chr4.1:88231462-88231481 | None:intergenic | 40.0% | |
| ! | GGACAAATTATTGCTGCTTC+TGG | + | chr4.1:88232453-88232472 | MS.gene054596:CDS | 40.0% |
| !! | AGTGCTGACTCAATTGACTT+TGG | - | chr4.1:88232072-88232091 | None:intergenic | 40.0% |
| !! | ATTATTGCTGCTTCTGGCTT+TGG | + | chr4.1:88232459-88232478 | MS.gene054596:CDS | 40.0% |
| !! | TCAGATGATCTTTTTGGCAC+TGG | + | chr4.1:88230868-88230887 | MS.gene054596:CDS | 40.0% |
| !!! | GGGGATCAGCTATTTTTCAA+TGG | + | chr4.1:88232496-88232515 | MS.gene054596:CDS | 40.0% |
| AACTCGACGTTTACGAATCC+CGG | - | chr4.1:88230022-88230041 | None:intergenic | 45.0% | |
| AAGTGCAGCTTCCATTCCAT+TGG | + | chr4.1:88232392-88232411 | MS.gene054596:CDS | 45.0% | |
| AATGGATAAGTGTTCGCACC+GGG | + | chr4.1:88230001-88230020 | MS.gene054596:CDS | 45.0% | |
| ACTGGTCCTCAGGTTAGTAT+TGG | + | chr4.1:88230886-88230905 | MS.gene054596:intron | 45.0% | |
| AGCAAGGAAAGCTCTTGAGA+TGG | + | chr4.1:88230795-88230814 | MS.gene054596:CDS | 45.0% | |
| AGGGTCAGCCATTAACGATT+TGG | - | chr4.1:88230315-88230334 | None:intergenic | 45.0% | |
| ATTCTGTTTGGAGATGCTGC+TGG | + | chr4.1:88231409-88231428 | MS.gene054596:CDS | 45.0% | |
| CGTAAACGTCGAGTTCTTTC+AGG | + | chr4.1:88230027-88230046 | MS.gene054596:CDS | 45.0% | |
| CTTTATCAGTAGAGGCAGCA+AGG | + | chr4.1:88230779-88230798 | MS.gene054596:CDS | 45.0% | |
| GAAAGCTCTTGAGATGGCAA+AGG | + | chr4.1:88230801-88230820 | MS.gene054596:CDS | 45.0% | |
| GAATGGATAAGTGTTCGCAC+CGG | + | chr4.1:88230000-88230019 | MS.gene054596:CDS | 45.0% | |
| GAGAAGTAACCAGTCAATGC+TGG | - | chr4.1:88232118-88232137 | None:intergenic | 45.0% | |
| GCCCCAGAGTTATGATTCTT+TGG | + | chr4.1:88230674-88230693 | MS.gene054596:intron | 45.0% | |
| GGTTACTTCTCCATCAGGTA+AGG | + | chr4.1:88232127-88232146 | MS.gene054596:intron | 45.0% | |
| TCAGCTGCTAGTCACATTAG+GGG | + | chr4.1:88231224-88231243 | MS.gene054596:CDS | 45.0% | |
| TGACTTTGGCACACTCTGTA+TGG | - | chr4.1:88232058-88232077 | None:intergenic | 45.0% | |
| TGCTGCCTCTACTGATAAAG+TGG | - | chr4.1:88230779-88230798 | None:intergenic | 45.0% | |
| ! | TGACTGGTTACTTCTCCATC+AGG | + | chr4.1:88232122-88232141 | MS.gene054596:CDS | 45.0% |
| ! | TTTCTAATCGAAGGCGTGTC+CGG | + | chr4.1:88231734-88231753 | MS.gene054596:intron | 45.0% |
| !! | CTCTTTCGTGCGATTTGGTT+CGG | + | chr4.1:88230479-88230498 | MS.gene054596:intron | 45.0% |
| !! | CTTTGGTGCTGGTCTTACTT+GGG | + | chr4.1:88232476-88232495 | MS.gene054596:CDS | 45.0% |
| !! | TTTGGTGCTGGTCTTACTTG+GGG | + | chr4.1:88232477-88232496 | MS.gene054596:CDS | 45.0% |
| AACCAGTCAATGCTGGATGC+AGG | - | chr4.1:88232111-88232130 | None:intergenic | 50.0% | |
| GAGTCAGCACTTCAAAAGGC+TGG | + | chr4.1:88232081-88232100 | MS.gene054596:CDS | 50.0% | |
| TGTTAGTCAAGGCTGCAAGC+TGG | + | chr4.1:88229903-88229922 | MS.gene054596:CDS | 50.0% | |
| TTCGGCTCTTTCGTGCGATT+TGG | + | chr4.1:88230474-88230493 | MS.gene054596:intron | 50.0% | |
| ! | GAGATGGCAAAGGTTGATCC+AGG | + | chr4.1:88230811-88230830 | MS.gene054596:CDS | 50.0% |
| !! | GCTTTGGTGCTGGTCTTACT+TGG | + | chr4.1:88232475-88232494 | MS.gene054596:CDS | 50.0% |
| !! | TACCTGCATCCAGCATTGAC+TGG | + | chr4.1:88232106-88232125 | MS.gene054596:CDS | 50.0% |
| !! | TGCTGGTGCTGTTCTAGTAC+AGG | + | chr4.1:88231426-88231445 | MS.gene054596:CDS | 50.0% |
| !!! | TCTTTTTGGCACTGGTCCTC+AGG | + | chr4.1:88230876-88230895 | MS.gene054596:CDS | 50.0% |
| AGTCAAGGCTGCAAGCTGGT+AGG | + | chr4.1:88229907-88229926 | MS.gene054596:CDS | 55.0% | |
| ATTGCAGGCGTGCAACTACG+AGG | + | chr4.1:88231631-88231650 | MS.gene054596:intron | 55.0% | |
| GGCTGCAAGCTGGTAGGATG+TGG | + | chr4.1:88229913-88229932 | MS.gene054596:CDS | 60.0% | |
| !! | GCTGCTTCTGGCTTTGGTGC+TGG | + | chr4.1:88232465-88232484 | MS.gene054596:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 88229900 | 88232524 | 88229900 | ID=MS.gene054596 |
| chr4.1 | mRNA | 88229900 | 88232524 | 88229900 | ID=MS.gene054596.t1;Parent=MS.gene054596 |
| chr4.1 | exon | 88229900 | 88230048 | 88229900 | ID=MS.gene054596.t1.exon1;Parent=MS.gene054596.t1 |
| chr4.1 | CDS | 88229900 | 88230048 | 88229900 | ID=cds.MS.gene054596.t1;Parent=MS.gene054596.t1 |
| chr4.1 | exon | 88230761 | 88230897 | 88230761 | ID=MS.gene054596.t1.exon2;Parent=MS.gene054596.t1 |
| chr4.1 | CDS | 88230761 | 88230897 | 88230761 | ID=cds.MS.gene054596.t1;Parent=MS.gene054596.t1 |
| chr4.1 | exon | 88231140 | 88231245 | 88231140 | ID=MS.gene054596.t1.exon3;Parent=MS.gene054596.t1 |
| chr4.1 | CDS | 88231140 | 88231245 | 88231140 | ID=cds.MS.gene054596.t1;Parent=MS.gene054596.t1 |
| chr4.1 | exon | 88231329 | 88231447 | 88231329 | ID=MS.gene054596.t1.exon4;Parent=MS.gene054596.t1 |
| chr4.1 | CDS | 88231329 | 88231447 | 88231329 | ID=cds.MS.gene054596.t1;Parent=MS.gene054596.t1 |
| chr4.1 | exon | 88231638 | 88231702 | 88231638 | ID=MS.gene054596.t1.exon5;Parent=MS.gene054596.t1 |
| chr4.1 | CDS | 88231638 | 88231702 | 88231638 | ID=cds.MS.gene054596.t1;Parent=MS.gene054596.t1 |
| chr4.1 | exon | 88231921 | 88232143 | 88231921 | ID=MS.gene054596.t1.exon6;Parent=MS.gene054596.t1 |
| chr4.1 | CDS | 88231921 | 88232143 | 88231921 | ID=cds.MS.gene054596.t1;Parent=MS.gene054596.t1 |
| chr4.1 | exon | 88232303 | 88232524 | 88232303 | ID=MS.gene054596.t1.exon7;Parent=MS.gene054596.t1 |
| chr4.1 | CDS | 88232303 | 88232524 | 88232303 | ID=cds.MS.gene054596.t1;Parent=MS.gene054596.t1 |
| Gene Sequence |
| Protein sequence |
