AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene98477

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene98477.t1 MTR_5g028610 70.280 1107 295 10 1 1101 1 1079 0.0 1480
MS.gene98477.t1 MTR_5g028340 43.702 1167 507 33 1 1101 1 1083 0.0 780
MS.gene98477.t1 MTR_5g028750 44.728 1138 517 28 1 1094 1 1070 0.0 777
MS.gene98477.t1 MTR_5g028420 44.560 1149 516 32 9 1100 5 1089 0.0 764
MS.gene98477.t1 MTR_5g028290 42.455 1173 544 27 1 1102 10 1122 0.0 761
MS.gene98477.t1 MTR_5g028070 45.833 984 442 29 155 1100 308 1238 0.0 719
MS.gene98477.t1 MTR_5g028070 36.594 276 140 15 29 280 28 292 1.02e-21 102
MS.gene98477.t1 MTR_2g078070 29.896 1154 626 42 25 1092 26 1082 3.53e-104 353
MS.gene98477.t1 MTR_5g035480 28.660 1127 582 39 31 1093 28 996 5.86e-90 311
MS.gene98477.t1 MTR_3g026660 26.904 1208 688 36 9 1097 5 1136 3.20e-89 312
MS.gene98477.t1 MTR_7g071940 27.580 1124 602 36 31 1092 28 1001 1.67e-86 302
MS.gene98477.t1 MTR_5g035280 27.265 1126 641 38 61 1101 61 1093 5.35e-84 298
MS.gene98477.t1 MTR_6g016430 29.303 1133 577 40 55 1101 53 1047 2.26e-82 291
MS.gene98477.t1 MTR_4g021690 29.708 993 536 34 113 1040 115 1010 5.71e-82 289
MS.gene98477.t1 MTR_5g071220 27.577 1077 627 32 6 1026 13 992 7.81e-81 288
MS.gene98477.t1 MTR_5g071220 27.577 1077 627 32 6 1026 13 992 2.01e-80 287
MS.gene98477.t1 MTR_5g072340 27.989 1104 597 36 20 1057 17 988 5.92e-79 280
MS.gene98477.t1 MTR_5g072340 32.447 188 108 6 924 1092 797 984 9.20e-12 70.1
MS.gene98477.t1 MTR_6g016420 28.557 998 525 29 151 1094 154 1017 6.67e-79 280
MS.gene98477.t1 MTR_4g022480 29.394 1007 538 36 113 1050 115 1017 2.01e-78 279
MS.gene98477.t1 MTR_5g035530 26.855 1024 574 30 155 1098 53 981 3.23e-78 278
MS.gene98477.t1 MTR_5g037450 26.106 1130 655 34 61 1101 65 1103 3.27e-78 280
MS.gene98477.t1 MTR_4g022560 29.282 1045 583 34 60 1040 61 1013 3.63e-78 278
MS.gene98477.t1 MTR_6g046130 29.050 1105 615 41 61 1092 61 1069 1.08e-77 278
MS.gene98477.t1 MTR_5g071823 28.599 1049 591 40 60 1045 60 1013 4.45e-77 275
MS.gene98477.t1 MTR_5g071850 28.599 1049 591 40 60 1045 60 1013 4.45e-77 275
MS.gene98477.t1 MTR_0133s0020 27.208 1121 634 41 61 1092 61 1088 5.62e-77 276
MS.gene98477.t1 MTR_4g055630 27.495 1102 614 36 61 1097 61 1042 7.05e-77 275
MS.gene98477.t1 MTR_4g022460 29.641 1002 547 36 113 1052 115 1020 2.19e-76 273
MS.gene98477.t1 MTR_6g052455 27.073 1049 564 35 149 1103 45 986 7.52e-76 271
MS.gene98477.t1 MTR_1g022380 27.204 1055 594 36 60 1045 60 1009 9.10e-76 271
MS.gene98477.t1 MTR_6g046930 27.412 1171 649 45 21 1092 19 1087 3.36e-75 271
MS.gene98477.t1 MTR_5g071470 27.198 1092 575 35 60 1096 60 986 4.54e-75 269
MS.gene98477.t1 MTR_6g047450 27.092 1159 645 45 37 1092 34 1095 7.38e-75 270
MS.gene98477.t1 MTR_6g052760 27.405 1029 588 33 149 1103 154 1097 1.10e-74 269
MS.gene98477.t1 MTR_5g071800 27.137 1135 628 36 20 1096 17 1010 2.06e-74 267
MS.gene98477.t1 MTR_3g015280 30.697 746 407 24 102 802 115 795 5.27e-74 262
MS.gene98477.t1 MTR_5g070490 27.058 1142 585 40 20 1092 17 979 8.82e-74 266
MS.gene98477.t1 MTR_0133s0030 25.829 1146 618 38 61 1092 61 1088 2.95e-73 265
MS.gene98477.t1 MTR_6g046570 27.051 1109 637 37 60 1092 60 1072 6.87e-73 264
MS.gene98477.t1 MTR_3g026660 25.774 1195 661 37 9 1097 5 1079 9.58e-73 263
MS.gene98477.t1 MTR_3g032800 27.201 1136 643 45 6 1053 11 1050 1.06e-72 265
MS.gene98477.t1 MTR_6g046480 26.797 1127 667 38 37 1092 34 1073 1.23e-71 260
MS.gene98477.t1 MTR_5g071670 27.158 1031 593 31 17 976 14 957 1.27e-71 261
MS.gene98477.t1 MTR_5g071670 30.594 219 118 7 673 885 1132 1322 3.95e-14 77.8
MS.gene98477.t1 MTR_5g071670 31.731 208 114 6 913 1092 768 975 3.13e-12 71.6
MS.gene98477.t1 MTR_4g050790 30.119 840 449 34 31 802 34 803 2.08e-71 255
MS.gene98477.t1 MTR_8g038590 26.813 1186 633 45 26 1075 33 1119 8.01e-71 259
MS.gene98477.t1 MTR_3g022790 28.598 1077 586 43 61 1074 65 1021 1.70e-70 258
MS.gene98477.t1 MTR_5g071780 26.571 1050 616 32 60 1055 60 1008 4.23e-70 254
MS.gene98477.t1 MTR_3g022400 27.763 1131 656 42 61 1092 65 1133 7.32e-70 255
MS.gene98477.t1 MTR_3g022400 27.888 1108 656 40 61 1092 65 1105 7.75e-70 254
MS.gene98477.t1 MTR_5g070960 27.122 1143 623 38 20 1096 17 1015 1.90e-69 253
MS.gene98477.t1 MTR_3g035480 26.886 1127 622 42 61 1079 71 1103 4.07e-69 254
MS.gene98477.t1 MTR_3g015550 31.939 717 363 29 151 804 161 815 4.30e-69 249
MS.gene98477.t1 MTR_3g015550 31.939 717 363 29 151 804 198 852 7.41e-69 249
MS.gene98477.t1 MTR_3g032110 25.675 1223 687 43 6 1087 11 1152 8.48e-69 253
MS.gene98477.t1 MTR_3g030960 27.144 1131 648 42 6 1053 11 1048 2.14e-68 251
MS.gene98477.t1 MTR_5g071570 27.649 1038 574 37 20 987 17 947 2.15e-68 251
MS.gene98477.t1 MTR_3g086070 27.363 1111 642 41 61 1092 61 1085 2.50e-68 250
MS.gene98477.t1 MTR_1g023600 27.875 1026 624 34 44 1031 45 992 2.60e-68 249
MS.gene98477.t1 MTR_2g014840 27.967 1087 613 40 61 1054 71 1080 3.23e-68 251
MS.gene98477.t1 MTR_6g016420 27.264 994 505 28 151 1094 154 979 4.35e-68 248
MS.gene98477.t1 MTR_0002s0110 26.484 1129 624 41 61 1079 71 1103 5.54e-68 250
MS.gene98477.t1 MTR_3g015560 30.355 705 356 22 151 788 161 797 6.79e-68 245
MS.gene98477.t1 MTR_3g071130 27.337 1123 621 42 61 1084 69 1095 1.58e-67 248
MS.gene98477.t1 MTR_1g047800 28.666 1057 605 40 61 1052 70 1042 3.05e-67 246
MS.gene98477.t1 MTR_3g032340 25.614 1222 692 44 6 1087 11 1155 3.27e-67 248
MS.gene98477.t1 MTR_3g023320 27.378 1125 632 46 61 1092 61 1093 5.80e-67 246
MS.gene98477.t1 MTR_4g022540 29.430 982 525 34 127 1047 137 1011 6.78e-67 245
MS.gene98477.t1 MTR_3g032760 27.648 1067 609 43 61 1053 71 1048 1.00e-66 246
MS.gene98477.t1 MTR_3g023030 26.701 1161 646 43 61 1094 71 1153 1.01e-66 246
MS.gene98477.t1 MTR_3g032960 27.194 1151 640 47 4 1071 9 1044 1.84e-66 245
MS.gene98477.t1 MTR_3g027200 27.022 1162 639 42 61 1092 69 1151 3.13e-66 244
MS.gene98477.t1 MTR_3g022300 27.933 1142 585 47 61 1050 69 1124 3.35e-66 244
MS.gene98477.t1 MTR_3g035940 27.281 1129 615 45 61 1079 71 1103 3.66e-66 244
MS.gene98477.t1 MTR_3g015500 29.106 828 453 31 31 802 72 821 5.77e-66 240
MS.gene98477.t1 MTR_3g030980 26.586 1151 631 43 4 1046 9 1053 6.27e-66 244
MS.gene98477.t1 MTR_8g446950 27.032 1021 569 39 150 1060 175 1129 9.65e-66 243
MS.gene98477.t1 MTR_5g070470 28.104 1039 581 36 20 977 17 970 1.01e-65 243
MS.gene98477.t1 MTR_6g046620 27.387 1110 630 47 37 1092 34 1021 1.16e-65 242
MS.gene98477.t1 MTR_3g435720 26.113 1168 625 42 8 1074 16 1046 1.42e-65 243
MS.gene98477.t1 MTR_0005s0200 26.859 1143 642 44 61 1092 89 1148 1.50e-65 242
MS.gene98477.t1 MTR_0002s0090 26.297 1099 595 40 61 1071 71 1042 2.05e-65 242
MS.gene98477.t1 MTR_3g035500 26.297 1099 595 40 61 1071 71 1042 2.05e-65 242
MS.gene98477.t1 MTR_3g032200 25.776 1160 671 44 4 1058 9 1083 5.37e-65 241
MS.gene98477.t1 MTR_3g021100 26.201 1145 666 43 61 1092 66 1144 6.81e-65 240
MS.gene98477.t1 MTR_2g063777 27.491 1164 668 46 23 1089 32 1116 7.16e-65 241
MS.gene98477.t1 MTR_0511s0020 26.516 1105 581 40 98 1103 105 1077 7.87e-65 239
MS.gene98477.t1 MTR_3g021340 27.281 1129 664 43 61 1094 66 1132 1.95e-64 238
MS.gene98477.t1 MTR_3g035960 26.273 1100 571 40 61 1070 71 1020 4.39e-64 238
MS.gene98477.t1 MTR_0256s0050 30.563 746 425 27 388 1092 363 1056 5.04e-64 237
MS.gene98477.t1 MTR_3g021400 26.502 1132 671 41 61 1092 59 1129 5.38e-64 237
MS.gene98477.t1 MTR_3g022600 28.630 978 515 37 150 1060 172 1033 5.89e-64 238
MS.gene98477.t1 MTR_3g033860 27.273 1111 612 47 61 1066 71 1090 6.25e-64 238
MS.gene98477.t1 MTR_5g035240 28.257 998 559 41 61 996 61 963 6.61e-64 235
MS.gene98477.t1 MTR_3g027250 29.036 985 523 45 153 1070 163 1038 8.55e-64 237
MS.gene98477.t1 MTR_3g034460 26.836 1103 630 42 61 1068 55 1075 9.17e-64 237
MS.gene98477.t1 MTR_2g039090 27.721 1176 617 53 26 1075 32 1100 1.29e-63 236
MS.gene98477.t1 MTR_3g032370 26.385 1137 655 45 4 1053 7 1048 1.29e-63 237
MS.gene98477.t1 MTR_3g022230 26.934 1099 599 42 61 1053 69 1069 1.41e-63 237
MS.gene98477.t1 MTR_3g435740 26.385 1137 661 44 6 1071 56 1087 2.08e-63 236
MS.gene98477.t1 MTR_3g031940 25.539 1159 660 43 4 1075 9 1051 3.93e-63 235
MS.gene98477.t1 MTR_0425s0020 27.808 1086 538 46 61 1056 69 998 4.00e-63 235
MS.gene98477.t1 MTR_7g078790 28.199 883 482 38 61 876 69 866 5.54e-63 232
MS.gene98477.t1 MTR_3g032150 26.455 1168 663 48 4 1066 7 1083 1.04e-62 234
MS.gene98477.t1 MTR_3g034380 27.314 1113 612 46 61 1068 71 1091 1.13e-62 234
MS.gene98477.t1 MTR_3g032500 25.308 1138 646 41 4 1029 9 1054 1.30e-62 233
MS.gene98477.t1 MTR_3g027420 28.152 1055 567 44 151 1092 157 1133 1.33e-62 233
MS.gene98477.t1 MTR_5g071310 26.784 1023 542 35 60 1026 60 931 1.33e-62 233
MS.gene98477.t1 MTR_5g071310 31.892 185 107 6 924 1089 762 946 5.80e-11 67.4
MS.gene98477.t1 MTR_5g072140 26.074 1047 603 32 20 1018 17 940 2.27e-62 230
MS.gene98477.t1 MTR_3g018980 25.444 1183 687 41 30 1092 33 1140 2.51e-62 232
MS.gene98477.t1 MTR_0603s0010 26.937 1084 652 41 60 1087 150 1149 4.16e-62 232
MS.gene98477.t1 MTR_4g050410 25.963 1090 654 40 31 1064 45 1037 5.69e-62 231
MS.gene98477.t1 MTR_8g038570 27.273 1122 650 47 42 1060 53 1111 1.32e-61 230
MS.gene98477.t1 MTR_5g037460 27.414 839 469 29 149 926 43 802 1.42e-61 226
MS.gene98477.t1 MTR_5g037460 32.512 203 119 8 915 1104 608 805 4.53e-13 74.3
MS.gene98477.t1 MTR_3g023030 26.207 1160 619 42 61 1094 71 1119 1.66e-61 229
MS.gene98477.t1 MTR_3g033240 25.687 1055 623 38 6 978 11 986 2.33e-61 229
MS.gene98477.t1 MTR_3g028040 26.770 1102 628 46 61 1064 71 1091 3.09e-61 229
MS.gene98477.t1 MTR_5g040770 27.195 820 475 28 315 1097 80 814 3.34e-61 226
MS.gene98477.t1 MTR_3g021380 26.855 1132 656 42 60 1092 68 1126 3.38e-61 228
MS.gene98477.t1 MTR_3g021170 27.410 1058 578 36 151 1092 154 1137 3.60e-61 228
MS.gene98477.t1 MTR_7g021000 25.998 1127 687 44 60 1100 64 1129 3.93e-61 228
MS.gene98477.t1 MTR_0144s0060 26.302 1114 621 40 61 1075 61 1073 5.76e-61 228
MS.gene98477.t1 MTR_0144s0060 37.037 162 90 5 563 721 991 1143 4.20e-13 74.7
MS.gene98477.t1 MTR_2g038900 27.531 1126 624 48 61 1090 63 1092 9.39e-61 228
MS.gene98477.t1 MTR_3g034430 26.184 1077 568 39 61 1054 71 1003 1.01e-60 228
MS.gene98477.t1 MTR_5g095910 27.173 1093 616 40 61 1071 71 1065 1.01e-60 228
MS.gene98477.t1 MTR_3g033080 27.396 960 571 37 6 902 11 907 2.19e-60 224
MS.gene98477.t1 MTR_3g022870 24.522 1150 687 38 56 1092 55 1136 2.70e-60 226
MS.gene98477.t1 MTR_3g027470 26.755 1054 596 42 116 1098 50 998 2.98e-60 224
MS.gene98477.t1 MTR_3g033380 25.696 1113 652 39 4 1029 9 1033 3.26e-60 226
MS.gene98477.t1 MTR_2g038760 27.184 1122 633 49 61 1090 74 1103 3.81e-60 226
MS.gene98477.t1 MTR_2g038930 28.122 1017 562 45 151 1090 5 929 4.11e-60 225
MS.gene98477.t1 MTR_8g030860 26.302 1152 654 46 6 1074 11 1050 4.85e-60 225
MS.gene98477.t1 MTR_3g015260 26.673 1046 558 38 148 1092 170 1107 1.96e-59 223
MS.gene98477.t1 MTR_3g022130 27.926 863 476 31 61 853 69 855 2.47e-59 223
MS.gene98477.t1 MTR_3g022940 25.919 1142 669 41 61 1092 62 1136 2.79e-59 223
MS.gene98477.t1 MTR_3g070590 26.794 1101 613 40 61 1084 69 1053 3.84e-59 222
MS.gene98477.t1 MTR_3g435220 26.740 1092 637 42 62 1087 64 1058 4.75e-59 222
MS.gene98477.t1 MTR_3g022920 25.709 1128 679 36 61 1092 65 1129 5.02e-59 222
MS.gene98477.t1 MTR_1g045960 26.147 1155 641 44 26 1087 32 1067 1.61e-58 220
MS.gene98477.t1 MTR_3g015260 26.471 1020 558 38 61 977 72 1002 1.62e-58 219
MS.gene98477.t1 MTR_5g037500 29.483 658 377 22 449 1097 403 982 3.01e-58 218
MS.gene98477.t1 MTR_3g019000 26.186 1138 672 41 61 1092 70 1145 3.34e-58 219
MS.gene98477.t1 MTR_8g036195 25.787 1144 607 43 61 1092 61 1074 3.55e-58 219
MS.gene98477.t1 MTR_3g022570 26.266 1066 610 40 135 1092 177 1174 6.06e-58 219
MS.gene98477.t1 MTR_3g014080 25.227 1209 651 37 61 1092 69 1201 6.55e-58 219
MS.gene98477.t1 MTR_3g020890 26.303 1209 679 49 6 1089 11 1132 7.12e-58 219
MS.gene98477.t1 MTR_3g071070 28.151 952 535 36 198 1084 23 890 2.25e-57 215
MS.gene98477.t1 MTR_6g046450 25.604 1035 590 34 102 1092 189 1087 3.36e-57 216
MS.gene98477.t1 MTR_5g037590 26.332 995 587 39 135 1053 118 1042 7.05e-57 215
MS.gene98477.t1 MTR_3g019040 25.731 1162 646 47 61 1092 70 1144 7.93e-57 215
MS.gene98477.t1 MTR_3g014080 26.029 1118 653 35 61 1087 69 1103 1.44e-56 214
MS.gene98477.t1 MTR_3g014040 26.723 1074 590 41 61 1039 71 1042 1.60e-56 214
MS.gene98477.t1 MTR_3g011620 26.852 972 578 33 173 1087 198 1093 6.05e-56 213
MS.gene98477.t1 MTR_1g008240 25.085 1172 669 42 6 1058 7 1088 1.07e-55 212
MS.gene98477.t1 MTR_3g025360 27.926 974 566 37 150 1070 180 1070 2.33e-55 210
MS.gene98477.t1 MTR_5g072250 26.509 928 539 28 20 887 17 861 3.22e-55 208
MS.gene98477.t1 MTR_3g033110 24.910 1116 672 42 6 1053 11 1028 4.57e-55 210
MS.gene98477.t1 MTR_5g034770 26.596 940 535 35 6 876 1 854 4.57e-55 209
MS.gene98477.t1 MTR_5g034770 39.130 138 81 2 962 1099 745 879 6.07e-14 77.0
MS.gene98477.t1 MTR_3g014320 25.704 1136 649 42 34 1063 40 1086 5.21e-55 210
MS.gene98477.t1 MTR_3g018980 26.454 911 511 31 30 853 33 871 8.02e-55 207
MS.gene98477.t1 MTR_7g021000 27.467 841 505 33 60 850 64 849 8.59e-55 206
MS.gene98477.t1 MTR_1g037610 25.497 1106 689 42 34 1071 40 1078 1.05e-53 206
MS.gene98477.t1 MTR_8g106550 26.291 1046 601 41 61 1053 41 969 1.16e-53 205
MS.gene98477.t1 MTR_3g018930 25.464 1186 689 44 30 1092 35 1148 1.17e-53 205
MS.gene98477.t1 MTR_3g020620 27.154 998 619 42 60 1005 226 1167 1.53e-53 205
MS.gene98477.t1 MTR_8g027540 25.643 1088 523 35 61 1074 66 941 3.11e-53 203
MS.gene98477.t1 MTR_3g035810 27.649 774 448 28 151 876 156 865 3.33e-53 202
MS.gene98477.t1 MTR_0230s0010 28.852 714 390 22 413 1072 358 1007 6.46e-53 202
MS.gene98477.t1 MTR_3g024460 28.906 768 448 30 392 1092 15 751 4.58e-52 197
MS.gene98477.t1 MTR_6g084550 27.064 957 529 41 4 883 9 873 7.53e-52 197
MS.gene98477.t1 MTR_3g014360 26.121 892 492 32 34 847 40 842 1.05e-51 199
MS.gene98477.t1 MTR_3g014390 26.237 1071 639 40 61 1054 70 1066 1.64e-51 199
MS.gene98477.t1 MTR_0002s0120 28.554 816 466 33 297 1068 84 826 2.34e-50 192
MS.gene98477.t1 MTR_8g011850 26.183 993 465 31 147 1089 1233 2007 1.68e-49 193
MS.gene98477.t1 MTR_3g014510 25.528 1136 629 47 34 1053 40 1074 2.20e-49 192
MS.gene98477.t1 MTR_8g037220 26.347 1002 475 35 147 1092 1162 1956 2.72e-49 192
MS.gene98477.t1 MTR_8g037220 26.347 1002 475 35 147 1092 941 1735 2.75e-49 192
MS.gene98477.t1 MTR_8g445980 27.070 628 360 21 61 640 67 644 1.00e-47 184
MS.gene98477.t1 MTR_8g445980 38.217 157 88 3 941 1093 686 837 8.12e-18 89.7
MS.gene98477.t1 MTR_8g011320 24.595 988 487 31 147 1094 125 894 1.44e-47 184
MS.gene98477.t1 MTR_4g022960 26.071 1097 622 38 5 1050 5 963 2.46e-47 184
MS.gene98477.t1 MTR_0267s0070 25.438 857 532 31 61 847 70 889 3.79e-47 185
MS.gene98477.t1 MTR_4g019360 25.778 1125 668 41 4 1087 13 1011 4.94e-47 184
MS.gene98477.t1 MTR_3g022870 22.957 1150 669 38 56 1092 55 1100 8.42e-47 183
MS.gene98477.t1 MTR_3g036050 28.000 725 425 26 397 1058 28 718 1.19e-44 176
MS.gene98477.t1 MTR_3g033130 25.175 1140 607 45 23 1045 32 1042 1.22e-44 176
MS.gene98477.t1 MTR_3g435210 26.838 857 502 35 309 1092 123 927 2.91e-43 171
MS.gene98477.t1 MTR_2g014730 24.840 1091 621 42 61 1085 71 1028 1.38e-42 170
MS.gene98477.t1 MTR_3g022060 26.424 825 494 27 342 1092 251 1036 6.37e-42 167
MS.gene98477.t1 MTR_3g018930 26.781 814 454 32 30 767 35 782 4.49e-40 160
MS.gene98477.t1 MTR_2g014720 25.435 920 524 33 174 1064 124 910 7.23e-40 160
MS.gene98477.t1 MTR_0137s0070 30.530 547 325 16 567 1087 4 521 1.01e-39 157
MS.gene98477.t1 MTR_0137s0070 30.530 547 325 16 567 1087 4 521 3.01e-39 156
MS.gene98477.t1 MTR_4g126000 30.737 475 288 17 557 1026 414 852 1.63e-38 156
MS.gene98477.t1 MTR_3g014470 30.787 432 258 16 397 819 381 780 4.18e-37 151
MS.gene98477.t1 MTR_5g040900 27.273 594 331 18 392 977 360 860 4.66e-37 151
MS.gene98477.t1 MTR_6g046440 29.457 516 303 14 613 1092 540 1030 7.47e-37 151
MS.gene98477.t1 MTR_8g010440 25.100 1000 538 39 61 973 65 940 3.92e-36 149
MS.gene98477.t1 MTR_8g010440 28.650 363 190 8 747 1094 655 963 3.98e-23 107
MS.gene98477.t1 MTR_0083s0120 27.726 642 339 22 451 1078 20 550 1.41e-35 146
MS.gene98477.t1 MTR_0137s0010 28.323 632 362 23 444 1030 2 587 2.49e-35 145
MS.gene98477.t1 MTR_3g034650 25.894 699 377 26 397 1070 3 585 4.91e-35 144
MS.gene98477.t1 MTR_7g089080 27.221 698 383 26 61 743 491 1078 8.86e-35 145
MS.gene98477.t1 MTR_7g091550 25.307 652 360 24 61 640 67 663 1.47e-32 137
MS.gene98477.t1 MTR_5g027870 23.610 881 503 31 60 848 59 861 3.62e-32 136
MS.gene98477.t1 MTR_5g027860 26.214 721 418 26 173 847 181 833 4.84e-32 135
MS.gene98477.t1 MTR_8g011590 26.766 538 302 19 147 643 46 532 4.94e-32 135
MS.gene98477.t1 MTR_8g011590 28.409 264 132 6 756 973 552 804 4.40e-20 97.1
MS.gene98477.t1 MTR_8g011590 36.134 119 68 3 982 1094 711 827 3.70e-11 68.2
MS.gene98477.t1 MTR_7g013560 23.519 1114 574 37 61 1103 65 971 5.81e-32 135
MS.gene98477.t1 MTR_1g078490 25.625 640 357 23 61 642 65 643 6.94e-31 131
MS.gene98477.t1 MTR_8g011280 23.847 1019 490 39 147 1094 28 831 7.19e-31 131
MS.gene98477.t1 MTR_5g035200 28.604 437 226 18 674 1100 2 362 8.57e-31 125
MS.gene98477.t1 MTR_7g491180 26.667 600 319 21 109 642 122 666 1.86e-30 130
MS.gene98477.t1 MTR_7g491180 31.875 160 106 2 940 1098 705 862 3.94e-12 71.2
MS.gene98477.t1 MTR_7g091190 26.667 600 319 21 109 642 122 666 1.86e-30 130
MS.gene98477.t1 MTR_7g091190 31.875 160 106 2 940 1098 705 862 3.94e-12 71.2
MS.gene98477.t1 MTR_7g491190 25.192 651 368 26 61 667 65 640 2.78e-30 130
MS.gene98477.t1 MTR_8g011600 29.745 353 176 8 760 1094 491 789 8.31e-30 128
MS.gene98477.t1 MTR_8g011600 26.027 511 263 17 174 640 24 463 2.82e-26 117
MS.gene98477.t1 MTR_6g046750 28.635 447 266 12 673 1092 13 433 1.99e-29 124
MS.gene98477.t1 MTR_2g060700 23.765 850 481 31 163 976 3 721 6.37e-29 125
MS.gene98477.t1 MTR_5g027910 23.775 837 460 37 60 804 60 810 7.98e-29 125
MS.gene98477.t1 MTR_7g091140 24.387 652 398 21 61 667 65 666 8.27e-29 125
MS.gene98477.t1 MTR_5g076840 25.960 651 377 29 45 640 54 654 1.08e-28 124
MS.gene98477.t1 MTR_5g076840 35.032 157 99 2 938 1093 695 849 5.16e-12 70.9
MS.gene98477.t1 MTR_8g043600 26.521 641 305 27 43 622 22 557 1.26e-28 122
MS.gene98477.t1 MTR_8g011180 29.577 355 188 9 747 1094 631 930 2.13e-28 124
MS.gene98477.t1 MTR_8g011180 24.242 627 339 22 61 618 65 624 1.30e-23 108
MS.gene98477.t1 MTR_1g030770 30.237 506 209 19 602 1094 535 909 2.23e-28 124
MS.gene98477.t1 MTR_1g030770 24.962 653 352 25 62 652 69 645 7.85e-25 112
MS.gene98477.t1 MTR_2g039040 30.227 397 226 17 320 680 190 571 3.23e-28 121
MS.gene98477.t1 MTR_7g091200 24.478 670 368 26 61 667 65 659 3.43e-28 123
MS.gene98477.t1 MTR_5g027900 24.424 868 484 36 60 847 60 835 3.56e-28 123
MS.gene98477.t1 MTR_3g018970 29.137 556 303 21 557 1092 26 510 4.35e-28 120
MS.gene98477.t1 MTR_5g021080 26.277 685 378 27 176 801 191 807 5.02e-28 122
MS.gene98477.t1 MTR_3g055830 23.374 907 442 36 61 848 63 835 7.13e-28 122
MS.gene98477.t1 MTR_3g007190 24.969 805 476 33 318 1087 241 952 1.83e-27 121
MS.gene98477.t1 MTR_2g038510 25.165 910 501 42 61 880 61 880 2.80e-27 120
MS.gene98477.t1 MTR_3g022740 26.863 510 282 16 476 977 211 637 3.03e-27 119
MS.gene98477.t1 MTR_3g021330 26.573 572 285 17 541 1092 134 590 1.23e-26 117
MS.gene98477.t1 MTR_6g452490 29.363 361 185 11 747 1092 653 958 2.72e-26 117
MS.gene98477.t1 MTR_6g452490 23.138 1007 546 37 60 973 64 935 3.64e-26 116
MS.gene98477.t1 MTR_3g056585 24.725 728 418 33 170 847 187 834 2.96e-26 117
MS.gene98477.t1 MTR_3g055870 22.529 941 506 37 4 848 1 814 3.84e-26 116
MS.gene98477.t1 MTR_8g011300 24.854 684 369 25 60 652 64 693 6.19e-26 116
MS.gene98477.t1 MTR_8g011300 27.676 383 179 13 747 1104 652 961 8.14e-15 80.1
MS.gene98477.t1 MTR_3g069210 23.299 867 488 36 61 846 61 831 6.73e-26 115
MS.gene98477.t1 MTR_3g035840 25.151 497 241 18 61 488 71 505 7.57e-26 114
MS.gene98477.t1 MTR_4g119195 25.392 638 368 24 61 640 65 652 1.22e-25 114
MS.gene98477.t1 MTR_7g078300 24.420 647 363 26 61 642 65 650 1.22e-25 114
MS.gene98477.t1 MTR_4g119195 25.392 638 368 24 61 640 65 652 1.41e-25 114
MS.gene98477.t1 MTR_3g056380 21.803 821 466 31 155 903 182 898 1.55e-25 114
MS.gene98477.t1 MTR_0144s0010 26.580 459 227 13 681 1092 4 399 2.23e-25 111
MS.gene98477.t1 MTR_5g027810 24.232 846 445 34 60 804 60 810 3.05e-25 114
MS.gene98477.t1 MTR_4g022950 27.494 451 258 12 602 1040 10 403 1.01e-24 108
MS.gene98477.t1 MTR_0065s0100 26.971 482 251 15 61 484 65 503 1.48e-24 111
MS.gene98477.t1 MTR_0065s0100 32.432 222 117 6 767 976 679 879 2.48e-17 88.2
MS.gene98477.t1 MTR_8g039260 25.910 687 344 28 449 1093 9 572 4.23e-24 108
MS.gene98477.t1 MTR_3g011480 24.055 794 464 33 61 778 65 795 6.40e-24 109
MS.gene98477.t1 MTR_3g055930 23.118 744 395 28 148 802 177 832 6.95e-24 109
MS.gene98477.t1 MTR_1g047910 25.000 700 371 28 61 688 65 682 7.09e-24 109
MS.gene98477.t1 MTR_1g047910 33.544 158 102 2 938 1094 704 859 4.21e-14 77.4
MS.gene98477.t1 MTR_3g011420 22.823 666 396 22 170 778 193 797 1.56e-23 108
MS.gene98477.t1 MTR_3g012310 22.748 888 542 33 61 880 67 878 2.00e-23 107
MS.gene98477.t1 MTR_3g012090 20.491 815 464 26 61 778 67 794 2.56e-23 107
MS.gene98477.t1 MTR_6g046760 29.268 451 256 14 673 1094 13 429 6.15e-23 103
MS.gene98477.t1 MTR_3g011280 22.687 789 450 30 61 778 65 764 6.40e-23 106
MS.gene98477.t1 MTR_3g011460 23.657 689 406 29 144 778 173 795 9.07e-23 105
MS.gene98477.t1 MTR_6g046750 26.018 442 237 10 673 1092 13 386 9.81e-23 102
MS.gene98477.t1 MTR_2g062360 26.196 439 265 17 212 640 26 415 9.83e-23 104
MS.gene98477.t1 MTR_8g011550 24.349 653 371 23 60 654 64 651 1.09e-22 105
MS.gene98477.t1 MTR_8g011550 27.329 322 166 10 786 1094 661 927 6.01e-12 70.5
MS.gene98477.t1 MTR_3g056310 23.748 779 447 29 163 880 187 879 1.21e-22 105
MS.gene98477.t1 MTR_3g011370 22.359 814 454 31 61 778 65 796 2.29e-22 104
MS.gene98477.t1 MTR_1g090690 23.566 802 458 28 150 880 798 1515 2.71e-22 104
MS.gene98477.t1 MTR_3g011280 22.059 816 454 29 61 778 65 796 3.39e-22 103
MS.gene98477.t1 MTR_3g017620 25.676 370 216 14 146 488 131 468 8.88e-22 100
MS.gene98477.t1 MTR_3g455900 23.883 582 317 21 170 689 70 587 9.82e-22 102
MS.gene98477.t1 MTR_3g055740 22.783 812 443 30 60 808 66 756 1.04e-21 102
MS.gene98477.t1 MTR_8g020790 23.256 559 358 19 103 633 395 910 1.22e-21 102
MS.gene98477.t1 MTR_0691s0020 24.091 660 392 27 171 778 194 796 1.54e-21 101
MS.gene98477.t1 MTR_8g011170 25.287 609 342 21 61 618 65 611 2.00e-21 101
MS.gene98477.t1 MTR_8g011170 26.437 348 166 10 758 1094 626 894 3.17e-18 90.9
MS.gene98477.t1 MTR_3g011390 22.497 809 461 30 61 778 65 798 2.83e-21 100
MS.gene98477.t1 MTR_3g056620 21.906 808 450 30 155 880 190 898 3.55e-21 100
MS.gene98477.t1 MTR_6g046550 28.135 327 198 7 787 1092 340 650 3.56e-21 100
MS.gene98477.t1 MTR_3g011300 22.777 821 439 30 61 778 65 793 4.99e-21 100
MS.gene98477.t1 MTR_1g078190 22.653 852 478 31 110 876 124 879 1.45e-20 98.6
MS.gene98477.t1 MTR_3g056200 22.989 783 452 28 155 880 188 876 1.97e-20 98.2
MS.gene98477.t1 MTR_3g056190 23.177 768 419 31 155 846 190 862 2.14e-20 98.2
MS.gene98477.t1 MTR_7g022290 28.986 276 133 7 836 1092 281 512 2.83e-20 96.3
MS.gene98477.t1 MTR_4g094540 27.056 462 250 19 397 818 426 840 3.59e-20 97.4
MS.gene98477.t1 MTR_4g094540 33.537 164 97 4 941 1097 694 852 2.48e-15 81.6
MS.gene98477.t1 MTR_0534s0010 37.888 161 91 3 941 1097 11 166 3.91e-20 89.4
MS.gene98477.t1 MTR_3g011270 23.521 693 398 25 61 658 65 720 4.41e-20 97.1
MS.gene98477.t1 MTR_5g035230 23.237 482 296 13 33 480 30 471 5.13e-20 95.1
MS.gene98477.t1 MTR_3g056410 24.105 726 412 26 175 846 165 805 9.55e-20 95.9
MS.gene98477.t1 MTR_3g012240 22.760 826 465 31 90 816 154 905 1.05e-19 95.9
MS.gene98477.t1 MTR_3g056360 24.105 726 412 26 175 846 174 814 1.29e-19 95.5
MS.gene98477.t1 MTR_3g011360 26.812 414 259 14 397 796 400 783 1.53e-19 95.1
MS.gene98477.t1 MTR_3g012050 21.021 666 401 23 31 618 28 646 1.91e-19 95.1
MS.gene98477.t1 MTR_3g012060 21.411 794 434 31 121 816 154 855 1.91e-19 95.1
MS.gene98477.t1 MTR_3g056320 23.627 783 452 30 155 880 191 884 2.17e-19 94.7
MS.gene98477.t1 MTR_5g035300 22.820 539 307 18 9 484 5 497 4.42e-19 92.4
MS.gene98477.t1 MTR_3g456030 22.616 818 493 34 61 808 66 813 4.53e-19 94.0
MS.gene98477.t1 MTR_4g073840 26.197 355 216 12 321 648 345 680 1.60e-18 92.0
MS.gene98477.t1 MTR_0511s0010 27.189 217 113 2 931 1103 24 239 3.26e-18 85.9
MS.gene98477.t1 MTR_5g039570 34.921 189 115 4 628 813 388 571 7.32e-18 89.4
MS.gene98477.t1 MTR_7g015770 23.509 587 306 24 176 672 182 715 8.63e-18 89.7
MS.gene98477.t1 MTR_0005s0230 30.337 267 156 9 405 665 234 476 9.61e-18 88.2
MS.gene98477.t1 MTR_5g035450 30.457 197 128 3 910 1098 88 283 2.49e-17 86.3
MS.gene98477.t1 MTR_5g035450 32.487 197 106 7 476 668 1 174 3.43e-15 79.7
MS.gene98477.t1 MTR_6g017015 36.538 156 81 5 828 973 187 334 4.10e-17 84.7
MS.gene98477.t1 MTR_1g028720 24.549 554 297 24 397 895 315 802 3.07e-16 84.3
MS.gene98477.t1 MTR_8g445160 33.514 185 113 4 912 1092 495 673 4.79e-16 83.6
MS.gene98477.t1 MTR_1g016210 25.227 440 269 16 397 817 431 829 7.17e-16 83.6
MS.gene98477.t1 MTR_1g090673 22.570 895 509 37 63 880 566 1353 2.82e-15 81.6
MS.gene98477.t1 MTR_8g090305 23.108 502 272 16 577 1068 84 481 3.07e-15 80.5
MS.gene98477.t1 MTR_6g046900 30.583 206 116 2 911 1092 168 370 6.82e-15 78.6
MS.gene98477.t1 MTR_3g456070 23.136 389 260 13 397 778 268 624 2.25e-14 78.2
MS.gene98477.t1 MTR_3g455940 21.292 836 460 29 79 847 1 705 2.25e-14 78.6
MS.gene98477.t1 MTR_1643s0010 31.163 215 124 6 651 848 1 208 2.45e-14 75.9
MS.gene98477.t1 MTR_3g022590 25.926 486 279 18 625 1086 12 440 2.09e-13 74.3
MS.gene98477.t1 MTR_3g012270 22.659 534 303 17 156 640 192 664 2.76e-13 74.7
MS.gene98477.t1 MTR_3g086080 32.530 166 95 5 906 1060 47 206 2.93e-13 71.2
MS.gene98477.t1 MTR_3g455910 23.198 444 283 18 361 778 293 704 3.34e-13 74.7
MS.gene98477.t1 MTR_6g078930 28.438 320 176 13 772 1071 687 973 4.07e-11 68.2
MS.gene98477.t1 MTR_4g119140 29.200 250 144 9 868 1100 482 715 4.22e-11 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene98477.t1 AT3G14470 27.027 962 528 41 96 978 123 989 3.45e-60 225
MS.gene98477.t1 AT3G14470 27.027 962 528 41 96 978 123 989 3.45e-60 225
MS.gene98477.t1 AT3G14460 26.614 883 513 30 61 876 66 880 4.69e-56 213
MS.gene98477.t1 AT3G50950 22.236 823 484 28 20 767 17 758 2.80e-25 114
MS.gene98477.t1 AT3G50950 22.236 823 484 28 20 767 17 758 2.80e-25 114
MS.gene98477.t1 AT3G46530 24.808 520 268 17 176 640 187 638 1.65e-21 101
MS.gene98477.t1 AT3G07040 23.077 520 323 14 155 640 179 655 2.95e-19 94.4
MS.gene98477.t1 AT3G46710 23.249 671 401 20 27 640 25 638 2.42e-18 91.3
MS.gene98477.t1 AT1G58410 23.551 552 347 19 176 688 184 699 2.92e-17 87.8
MS.gene98477.t1 AT1G58410 23.551 552 347 19 176 688 184 699 2.92e-17 87.8
MS.gene98477.t1 AT1G58410 23.551 552 347 19 176 688 184 699 2.92e-17 87.8
MS.gene98477.t1 AT3G46730 23.200 500 317 13 151 619 162 625 3.87e-17 87.4
MS.gene98477.t1 AT1G12280 22.951 610 351 26 61 618 75 617 1.87e-15 82.0
MS.gene98477.t1 AT1G58390 24.199 562 341 25 174 688 183 706 8.45e-15 80.1
MS.gene98477.t1 AT1G58390 24.199 562 341 25 174 688 183 706 8.45e-15 80.1
MS.gene98477.t1 AT4G27220 27.907 387 218 17 324 677 277 635 1.20e-13 76.3
MS.gene98477.t1 AT4G27220 27.907 387 218 17 324 677 269 627 1.55e-13 75.9
MS.gene98477.t1 AT3G44480 34.815 135 85 2 940 1074 738 869 2.19e-13 75.5
MS.gene98477.t1 AT3G44480 34.815 135 85 2 940 1074 738 869 2.27e-13 75.5
MS.gene98477.t1 AT3G44480 34.815 135 85 2 940 1074 738 869 2.27e-13 75.5
MS.gene98477.t1 AT3G44480 34.815 135 85 2 940 1074 738 869 2.42e-13 75.5
MS.gene98477.t1 AT3G44480 34.815 135 85 2 940 1074 738 869 2.42e-13 75.5
MS.gene98477.t1 AT1G69550 25.979 562 334 19 577 1082 682 1217 7.24e-13 73.9
MS.gene98477.t1 AT1G69550 45.631 103 53 3 567 667 982 1083 1.27e-11 69.7
MS.gene98477.t1 AT1G12290 24.299 642 393 28 41 642 54 642 3.00e-12 71.6
MS.gene98477.t1 AT1G12290 24.417 643 391 28 41 642 12 600 3.98e-12 71.2
MS.gene98477.t1 AT1G12290 24.417 643 391 28 41 642 12 600 3.98e-12 71.2
MS.gene98477.t1 AT1G12290 24.417 643 391 28 41 642 12 600 3.98e-12 71.2
MS.gene98477.t1 AT3G04220 33.577 137 89 2 940 1076 745 879 3.60e-11 68.2
MS.gene98477.t1 AT3G04220 33.577 137 89 2 940 1076 716 850 3.92e-11 68.2
MS.gene98477.t1 AT4G16890 24.521 522 291 21 567 1070 570 1006 7.20e-11 67.4
MS.gene98477.t1 AT5G05400 21.250 880 519 29 61 881 74 838 8.26e-11 67.0

Find 228 sgRNAs with CRISPR-Local

Find 279 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAACTTTGGCTTGCAAATT+TGG 0.083777 5.4:-19111721 MS.gene98477:CDS
TCTGCATACTTTGATCATTT+TGG 0.099646 5.4:-19109140 MS.gene98477:CDS
CCTCAAATCACTTGAGAAAT+TGG 0.148004 5.4:-19109221 MS.gene98477:CDS
TTCATATCCCCAATAGATTT+TGG 0.161551 5.4:+19110585 None:intergenic
TTCACCTCTCAAGTATTAAA+TGG 0.168667 5.4:-19109393 MS.gene98477:CDS
GTAACTTGTCTATAGTATTA+AGG 0.198646 5.4:+19110538 None:intergenic
TCGTGCTAGGTCGTGCATTA+AGG 0.206665 5.4:+19110893 None:intergenic
TCAAATTTCTCGAACTTCTA+AGG 0.219802 5.4:-19109939 MS.gene98477:CDS
GTTAGCTTGATAATGGAATT+TGG 0.230372 5.4:+19110516 None:intergenic
TCTTCCATGTCTTTGAAAAT+AGG 0.235746 5.4:+19110954 None:intergenic
CAAATTGGTTAGCTTGATAA+TGG 0.245130 5.4:+19110509 None:intergenic
CAATTTCAACGTTTGCAAAT+TGG 0.248837 5.4:+19110494 None:intergenic
GCAGTTTAGTTGAAACTTCT+TGG 0.256600 5.4:+19111975 None:intergenic
ACTACTGGTGGTAGTGTTCT+TGG 0.300362 5.4:+19111952 None:intergenic
GAAAACTAATCCATACATTT+AGG 0.301458 5.4:-19109032 None:intergenic
GAGTTGGCCCCATCTATAAT+TGG 0.303790 5.4:-19111890 MS.gene98477:CDS
AGCTAAGGGCCATTCTCTTT+TGG 0.305619 5.4:-19110731 MS.gene98477:CDS
AAGACATTGCCAAAATCTAT+TGG 0.308999 5.4:-19110594 MS.gene98477:CDS
AATTAGTTCATCAATGTTCT+TGG 0.326875 5.4:+19110443 None:intergenic
TGACGAGGTGCTTGGTGATT+TGG 0.329280 5.4:-19111588 MS.gene98477:CDS
GTTACCATTGTTGGATTTGC+AGG 0.332720 5.4:-19111797 MS.gene98477:CDS
TAAAATCAAAAGAAGCTCTT+AGG 0.336697 5.4:+19110805 None:intergenic
AAGTGATTTGAGGTTGTCTA+TGG 0.340838 5.4:+19109231 None:intergenic
AGACATTGCCAAAATCTATT+GGG 0.344472 5.4:-19110593 MS.gene98477:CDS
TTGCCAACAATATTACTGTT+AGG 0.353134 5.4:-19111502 MS.gene98477:CDS
TCCGTATTGGTTTCCTTACA+TGG 0.361783 5.4:-19110037 MS.gene98477:CDS
TGCAGTTTACTTTCCATCCT+TGG 0.363517 5.4:-19109842 MS.gene98477:CDS
GATCATTGACAGCAGTCTTA+AGG 0.370063 5.4:+19112134 None:intergenic
TCCACCTTCTTTGTTTCAAA+AGG 0.375359 5.4:-19110760 MS.gene98477:CDS
TTCTCGAAGTCCTAAATGTA+TGG 0.379935 5.4:+19109022 None:intergenic
AAAAGGCAACCTTGTTATAC+TGG 0.380267 5.4:-19111636 MS.gene98477:CDS
TAACTTGTCTATAGTATTAA+GGG 0.381777 5.4:+19110539 None:intergenic
AGTTCGAGAAATTTGAGGTT+TGG 0.383699 5.4:+19109946 None:intergenic
GTTTCTGTGGTTACCATTGT+TGG 0.386204 5.4:-19111806 MS.gene98477:CDS
ACCTGCGTTCTTTAACCATA+AGG 0.387328 5.4:-19109357 MS.gene98477:CDS
AGAAACTTGTCATTAAAGAT+TGG 0.389105 5.4:-19109501 MS.gene98477:CDS
CCAATTTCTCAAGTGATTTG+AGG 0.391994 5.4:+19109221 None:intergenic
CCTTGCAAGGATTTCATCAA+TGG 0.393769 5.4:+19112300 None:intergenic
ACAAACGCTTTCTCTCTTTG+TGG 0.395110 5.4:-19110340 MS.gene98477:CDS
ATTGTTGGATTTGCAGGAAT+CGG 0.395679 5.4:-19111791 MS.gene98477:CDS
AGTATTTCAACGACTTTGTT+GGG 0.399413 5.4:-19110980 MS.gene98477:CDS
GGCCAATCATCACCGGTATC+TGG 0.407360 5.4:+19109088 None:intergenic
TTTGAATATTTGACTATAAG+TGG 0.409909 5.4:+19110665 None:intergenic
CCTGCGTTCTTTAACCATAA+GGG 0.410194 5.4:-19109356 MS.gene98477:CDS
TGTCAATGATCTGAATGATT+TGG 0.417302 5.4:-19112122 MS.gene98477:CDS
TTGAAGCATCTTGAGCTAGA+TGG 0.418670 5.4:-19110417 MS.gene98477:CDS
GTCAGATGATCGAAACCTTT+GGG 0.424915 5.4:+19109460 None:intergenic
AACAGAAAATTATGATGGAT+TGG 0.425339 5.4:-19111265 MS.gene98477:CDS
CATTCGGAGAGTGGTCTTGA+AGG 0.428256 5.4:+19110641 None:intergenic
GTCTTCTCCGATACTTCTTT+AGG 0.429690 5.4:+19111926 None:intergenic
TTAGAAGTTCGAGAAATTTG+AGG 0.430073 5.4:+19109941 None:intergenic
AAGATATTAATGACATCTAA+TGG 0.432337 5.4:-19111563 MS.gene98477:CDS
GTCAAAAGGTTCCGCCAGTC+TGG 0.432804 5.4:-19112165 MS.gene98477:CDS
CGTGCTAGGTCGTGCATTAA+GGG 0.436710 5.4:+19110894 None:intergenic
ATTAGTTCATCAATGTTCTT+GGG 0.437052 5.4:+19110444 None:intergenic
TCTCTCTTTGTGGTTAGTGA+GGG 0.439088 5.4:-19110330 MS.gene98477:CDS
AGTTATGAAGCTGAAGATCT+TGG 0.439168 5.4:+19109281 None:intergenic
ATCTTGTTCAACACAGATCC+TGG 0.441142 5.4:-19111839 MS.gene98477:CDS
TAGGTAAAACACTTCCGTAT+TGG 0.442432 5.4:-19110050 MS.gene98477:CDS
GGTCAGATGATCGAAACCTT+TGG 0.444140 5.4:+19109459 None:intergenic
ATTTCTCGAACTTCTAAGGT+TGG 0.444278 5.4:-19109935 MS.gene98477:CDS
CTGAGAGCAATTTATATTGT+GGG 0.452250 5.4:-19110078 MS.gene98477:CDS
TTAACAAGCGATTCCATGTA+AGG 0.454607 5.4:+19110024 None:intergenic
AAGCAAATCAAAGATAACTT+TGG 0.459400 5.4:-19111734 MS.gene98477:CDS
TCTACTTCTGTTGAAGGAAA+AGG 0.459849 5.4:-19111653 MS.gene98477:CDS
AGCCAGATACCGGTGATGAT+TGG 0.460501 5.4:-19109090 MS.gene98477:CDS
GTGTGCAGCACGGTCTTTGA+GGG 0.460648 5.4:+19111682 None:intergenic
GAGTATTTCAACGACTTTGT+TGG 0.461343 5.4:-19110981 MS.gene98477:CDS
AAAACTGAAGACTCTTCCAT+TGG 0.462781 5.4:-19109326 MS.gene98477:CDS
CAAGACCACTCTCCGAATGC+TGG 0.463628 5.4:-19110637 MS.gene98477:CDS
TGTGTGCAGCACGGTCTTTG+AGG 0.464204 5.4:+19111681 None:intergenic
ATTTATATTGTGGGGTACAT+AGG 0.465985 5.4:-19110069 MS.gene98477:CDS
CTACTGGTGGTAGTGTTCTT+GGG 0.466679 5.4:+19111953 None:intergenic
CAACCTAACAGTAATATTGT+TGG 0.466957 5.4:+19111499 None:intergenic
TTGTTGGATTTGCAGGAATC+GGG 0.467696 5.4:-19111790 MS.gene98477:CDS
AATTGAACAGAAAATTATGA+TGG 0.468562 5.4:-19111270 MS.gene98477:CDS
TGCTTAATGAAGTGGAATCT+TGG 0.468745 5.4:-19111349 MS.gene98477:CDS
GGAGTTTCTAGAATATCTTA+AGG 0.474508 5.4:-19111168 MS.gene98477:CDS
GTCGATCACCACCAGAGTAT+TGG 0.476687 5.4:-19109546 MS.gene98477:CDS
ATCATCATCGTCGTCCAAGC+TGG 0.479449 5.4:+19110227 None:intergenic
TCACCTCTCAAGTATTAAAT+GGG 0.481515 5.4:-19109392 MS.gene98477:CDS
AAGTCATCTACTTCTGTTGA+AGG 0.482315 5.4:-19111659 MS.gene98477:CDS
TTTCAGAACAACTATATCCA+TGG 0.483307 5.4:+19112327 None:intergenic
GAACCACGTCCCAGGTCAAA+AGG 0.485420 5.4:-19112179 MS.gene98477:CDS
AGTTGGCCCCATCTATAATT+GGG 0.489979 5.4:-19111889 MS.gene98477:CDS
TCGAGAGATTAATTCATCTC+TGG 0.490659 5.4:-19111061 MS.gene98477:CDS
TTCCACCATTTCCTGAGGTT+AGG 0.492472 5.4:+19109796 None:intergenic
AATACGTCATGGCAGGAGAA+AGG 0.493715 5.4:-19109620 MS.gene98477:CDS
ATTGTCCTAACCTCAGGAAA+TGG 0.495171 5.4:-19109801 MS.gene98477:CDS
TTCAAAAGGCAAAGAAGCTA+AGG 0.496303 5.4:-19110746 MS.gene98477:CDS
TTGCATCTTCCAAAAGAGAA+TGG 0.496813 5.4:+19110722 None:intergenic
TTCTCTCTTTGTGGTTAGTG+AGG 0.496960 5.4:-19110331 MS.gene98477:CDS
TCAGACAAAGAAGTCATTTG+AGG 0.499703 5.4:+19109256 None:intergenic
AGTGGCATGCAAGTTAGGTC+AGG 0.500455 5.4:+19109706 None:intergenic
TATTTCAAAGTTTGATGTGA+AGG 0.501610 5.4:-19111297 MS.gene98477:CDS
ACGATTCGTATCAGATCAAA+TGG 0.502035 5.4:-19110874 MS.gene98477:CDS
ACTCGCCCGTCTCATCTTCG+AGG 0.503875 5.4:-19111759 MS.gene98477:CDS
GCAAATTTGGATTGATGATG+TGG 0.505143 5.4:-19111708 MS.gene98477:CDS
TTGGGGATATGAATAATTTG+AGG 0.505521 5.4:-19110575 MS.gene98477:CDS
GCTGTGAATGATATCAAGAA+AGG 0.506664 5.4:+19111233 None:intergenic
ACTGAGAGCAATTTATATTG+TGG 0.507248 5.4:-19110079 MS.gene98477:CDS
ACATCTTGAAAGATCCAGCT+TGG 0.508258 5.4:-19110241 MS.gene98477:CDS
CTCTCTTTGTGGTTAGTGAG+GGG 0.508659 5.4:-19110329 MS.gene98477:CDS
TACTTCTTTAGGCGGACTAC+TGG 0.508896 5.4:+19111937 None:intergenic
TTCAAAGTTTGATGTGAAGG+AGG 0.509916 5.4:-19111294 MS.gene98477:CDS
TCCAGGGTCTTACGTTAAGA+TGG 0.510843 5.4:-19110179 MS.gene98477:CDS
ATAAATTGCTCTCAGTTCAG+AGG 0.512082 5.4:+19110086 None:intergenic
CATTCCCGTGCTTAATGAAG+TGG 0.519807 5.4:-19111357 MS.gene98477:CDS
CCAAGGTGTCAGCCAGATAC+CGG 0.520727 5.4:-19109100 MS.gene98477:CDS
GAAGAAGCAGACAAGGGTTG+TGG 0.521172 5.4:+19111443 None:intergenic
AGATCAAATGGAGAATGTTA+CGG 0.524841 5.4:-19110862 MS.gene98477:CDS
TTCAACACAGATCCTGGACC+TGG 0.525131 5.4:-19111833 MS.gene98477:CDS
GTGCTCGTGTTCATGTCCTT+CGG 0.527122 5.4:+19110690 None:intergenic
TGACGTATTGTTTCAAGTAG+TGG 0.527468 5.4:+19109634 None:intergenic
ATTCATCTCTGGACAGCAGA+AGG 0.529104 5.4:-19111050 MS.gene98477:CDS
CAAGGGAAGGTATCCTTGCA+AGG 0.529125 5.4:+19112287 None:intergenic
TCCATGTAAGGAAACCAATA+CGG 0.529805 5.4:+19110036 None:intergenic
TGTCATGGAGATCCAGCATT+CGG 0.530245 5.4:+19110625 None:intergenic
CAACAACTTACGAGGCCACT+TGG 0.532721 5.4:-19110271 MS.gene98477:CDS
AAACTGAAGACTCTTCCATT+GGG 0.533705 5.4:-19109325 MS.gene98477:CDS
ATACGTCATGGCAGGAGAAA+GGG 0.534502 5.4:-19109619 MS.gene98477:CDS
CTTATCCTCGAAGATGAGAC+GGG 0.537386 5.4:+19111754 None:intergenic
TATTTCTGAATGTGACAAGT+TGG 0.538780 5.4:-19109197 MS.gene98477:CDS
GCCTCGCAAACTATACAAGC+TGG 0.538871 5.4:-19110373 MS.gene98477:CDS
CAAATTTGGATTGATGATGT+GGG 0.541844 5.4:-19111707 MS.gene98477:CDS
CCGGTATCTGGCTGACACCT+TGG 0.543447 5.4:+19109100 None:intergenic
ATTGCACCTTGTTGTTGCCA+AGG 0.546973 5.4:-19109117 MS.gene98477:CDS
AGTATCGGAGAAGACGGAGG+TGG 0.547669 5.4:-19111918 MS.gene98477:CDS
ATGTCTTGATTCCCATGTCA+TGG 0.547762 5.4:+19110610 None:intergenic
TACAGCGTGGGTGACCTTAG+CGG 0.548282 5.4:-19110306 MS.gene98477:CDS
TCTCAGATTGTCCTAACCTC+AGG 0.548532 5.4:-19109807 MS.gene98477:CDS
GGAAGAAGAAGAAGCAGACA+AGG 0.548848 5.4:+19111436 None:intergenic
ACTTGTCATTAAAGATTGGA+AGG 0.551634 5.4:-19109497 MS.gene98477:CDS
TTGGAAGTTCATCAAGGTGT+GGG 0.552641 5.4:+19109965 None:intergenic
AGTTTACTTTCCATCCTTGG+AGG 0.552984 5.4:-19109839 MS.gene98477:CDS
TGATGAAGAGCTAGTTCTCA+CGG 0.553439 5.4:-19109671 MS.gene98477:CDS
CTTCCCATTTAATACTTGAG+AGG 0.555515 5.4:+19109389 None:intergenic
TGAGGTTTGGAAGTTCATCA+AGG 0.556164 5.4:+19109959 None:intergenic
AAGTATTTGATCCAATACTC+TGG 0.557850 5.4:+19109535 None:intergenic
CAATGATCTGAATGATTTGG+TGG 0.559876 5.4:-19112119 MS.gene98477:CDS
AAAATTATGATGGATTGGAA+TGG 0.560417 5.4:-19111260 MS.gene98477:CDS
TTAAGGTTTCGCAGCCAGAC+TGG 0.561664 5.4:+19112151 None:intergenic
GATGATGATAATTATCTCAC+AGG 0.562644 5.4:-19110213 MS.gene98477:CDS
TCTTGAGCTAGATGGATGCT+TGG 0.563577 5.4:-19110409 MS.gene98477:CDS
AGATTCCACTTCATTAAGCA+CGG 0.565582 5.4:+19111352 None:intergenic
CCCTTATGGTTAAAGAACGC+AGG 0.567696 5.4:+19109356 None:intergenic
GATCTGATACGAATCGTGCT+AGG 0.568993 5.4:+19110880 None:intergenic
GAGGCGACTATTATGATGAC+TGG 0.572702 5.4:+19112039 None:intergenic
GCGGTCAAGAACCACGTCCC+AGG 0.573482 5.4:-19112187 MS.gene98477:CDS
ATGAGGCGTGGCATAATCCT+CGG 0.573713 5.4:+19112087 None:intergenic
AATTTGTGGCCAATCATCAC+CGG 0.573804 5.4:+19109081 None:intergenic
GAGATCCAGCATTCGGAGAG+TGG 0.580697 5.4:+19110632 None:intergenic
TTTAGCTTGGATGTTTCACA+TGG 0.581515 5.4:-19110786 MS.gene98477:CDS
GATTCCACTTCATTAAGCAC+GGG 0.581791 5.4:+19111353 None:intergenic
TTCTTTAGGCGGACTACTGG+TGG 0.584540 5.4:+19111940 None:intergenic
TGAGCCTTGCAAGTCCGCTA+AGG 0.584673 5.4:+19110292 None:intergenic
TAAATTGCTCTCAGTTCAGA+GGG 0.585740 5.4:+19110087 None:intergenic
TTGAAACAATACGTCATGGC+AGG 0.586971 5.4:-19109627 MS.gene98477:CDS
GATGAAGAGCTAGTTCTCAC+GGG 0.588263 5.4:-19109670 MS.gene98477:CDS
TTTGGAAGTTCATCAAGGTG+TGG 0.588280 5.4:+19109964 None:intergenic
TGATCGACTGTCCTCGATGT+TGG 0.591251 5.4:+19109561 None:intergenic
GACGGAGGTGGAGACAGAGT+TGG 0.591910 5.4:-19111906 MS.gene98477:CDS
CTCTCAAGTATTAAATGGGA+AGG 0.592425 5.4:-19109388 MS.gene98477:CDS
ACTAGCTCTTCATCAAGACC+AGG 0.592526 5.4:+19109679 None:intergenic
AATGTTACGGTGGATCCAGA+AGG 0.594146 5.4:-19110849 MS.gene98477:CDS
GCTTATCCTCGAAGATGAGA+CGG 0.594705 5.4:+19111753 None:intergenic
GTCTCAATGTTATCTACTCG+AGG 0.594774 5.4:-19110472 MS.gene98477:CDS
TAGTCCGCCTAAAGAAGTAT+CGG 0.595143 5.4:-19111933 MS.gene98477:CDS
CGTCGTTAAAGATCTGACTA+AGG 0.596141 5.4:-19111192 MS.gene98477:CDS
GAAGCAGACAAGGGTTGTGG+TGG 0.598334 5.4:+19111446 None:intergenic
ATGTTACGGTGGATCCAGAA+GGG 0.599741 5.4:-19110848 MS.gene98477:CDS
TCCAGCTTGTATAGTTTGCG+AGG 0.599868 5.4:+19110372 None:intergenic
GTTGCTTTGTAAACACCCAA+TGG 0.601308 5.4:+19109310 None:intergenic
ATTGTGAGTTCCTCCAAGGA+TGG 0.601538 5.4:+19109829 None:intergenic
GTTAGTGAGGGGTACAGCGT+GGG 0.602673 5.4:-19110318 MS.gene98477:CDS
GATCTAAAGTCTCTTCCCAA+AGG 0.603953 5.4:-19109475 MS.gene98477:CDS
GATGCAAACGTTGCTTCCGA+AGG 0.603963 5.4:-19110706 MS.gene98477:CDS
AAAGAGAGACCACTTCTATG+AGG 0.604241 5.4:+19112070 None:intergenic
CTGACACCTTGGCAACAACA+AGG 0.608495 5.4:+19109111 None:intergenic
GTGACCTTAGCGGACTTGCA+AGG 0.609906 5.4:-19110296 MS.gene98477:CDS
TAAAGAAGTATCGGAGAAGA+CGG 0.610552 5.4:-19111924 MS.gene98477:CDS
AATGCTGGATCTCCATGACA+TGG 0.611290 5.4:-19110622 MS.gene98477:CDS
GACATTGCCAAAATCTATTG+GGG 0.613168 5.4:-19110592 MS.gene98477:CDS
GATACTACAACGAACTTCCG+AGG 0.615407 5.4:-19111142 MS.gene98477:CDS
TCCATCTTAACGTAAGACCC+TGG 0.616085 5.4:+19110178 None:intergenic
AATGTTAAGACTTTGGAGTG+AGG 0.617364 5.4:+19109438 None:intergenic
TGTTGTTTCAGTTTCACGCA+TGG 0.617386 5.4:+19111415 None:intergenic
ATAGTTACTGACGAGGTGCT+TGG 0.619116 5.4:-19111596 MS.gene98477:CDS
GTCCTAACCTCAGGAAATGG+TGG 0.620127 5.4:-19109798 MS.gene98477:CDS
TCAAAAGGCAAAGAAGCTAA+GGG 0.620319 5.4:-19110745 MS.gene98477:CDS
TCAAATTGTCCAGTATAACA+AGG 0.621576 5.4:+19111627 None:intergenic
TTCTCCGATACTTCTTTAGG+CGG 0.622098 5.4:+19111929 None:intergenic
GTGGCATGCAAGTTAGGTCA+GGG 0.622596 5.4:+19109707 None:intergenic
CAAGATGTGAAATTTCCAAG+TGG 0.623582 5.4:+19110256 None:intergenic
TGAGATTGTGAGTTCCTCCA+AGG 0.624958 5.4:+19109825 None:intergenic
TGAGAGCAATTTATATTGTG+GGG 0.628037 5.4:-19110077 MS.gene98477:CDS
TGATCTGAATGATTTGGTGG+AGG 0.631582 5.4:-19112116 MS.gene98477:CDS
CGAGGATGACTATGATGAGG+AGG 0.632296 5.4:-19110151 MS.gene98477:CDS
TGGACCTGGAAAAGTTTCTG+TGG 0.635973 5.4:-19111819 MS.gene98477:CDS
CCATTGATGAAATCCTTGCA+AGG 0.637486 5.4:-19112300 MS.gene98477:CDS
TATGCCACGCCTCATAGAAG+TGG 0.638991 5.4:-19112079 MS.gene98477:CDS
CTACTTGAAACAATACGTCA+TGG 0.639906 5.4:-19109631 MS.gene98477:CDS
CGTTAAAGATCTGACTAAGG+AGG 0.640716 5.4:-19111189 MS.gene98477:CDS
GAAGGGGAAAATGTTCGTGA+AGG 0.645580 5.4:-19110831 MS.gene98477:CDS
AGGTTTCGCAGCCAGACTGG+CGG 0.650578 5.4:+19112154 None:intergenic
ATGCTGGATCTCCATGACAT+GGG 0.651730 5.4:-19110621 MS.gene98477:CDS
GGTTAGTGAGGGGTACAGCG+TGG 0.660923 5.4:-19110319 MS.gene98477:CDS
GAGACCACTTCTATGAGGCG+TGG 0.669006 5.4:+19112075 None:intergenic
TGTTACGGTGGATCCAGAAG+GGG 0.669734 5.4:-19110847 MS.gene98477:CDS
CCACGAGGATGACTATGATG+AGG 0.670399 5.4:-19110154 MS.gene98477:CDS
TAGATGACTTGTGTGCAGCA+CGG 0.671274 5.4:+19111672 None:intergenic
GATTCCTGCAAATCCAACAA+TGG 0.672939 5.4:+19111793 None:intergenic
TATTTGATCCAATACTCTGG+TGG 0.673052 5.4:+19109538 None:intergenic
ACATCGATTAAATGATCCCG+AGG 0.677774 5.4:+19111083 None:intergenic
TGGGACGTGGTTCTTGACCG+CGG 0.678147 5.4:+19112189 None:intergenic
GAAGAAGAAGAAGCAGACAA+GGG 0.678992 5.4:+19111437 None:intergenic
ATTGCTCTCAGTTCAGAGGG+AGG 0.681754 5.4:+19110090 None:intergenic
TTAAGCACGGGAATGACATG+TGG 0.685019 5.4:+19111365 None:intergenic
AGAAGTATCGGAGAAGACGG+AGG 0.700284 5.4:-19111921 MS.gene98477:CDS
AACTGAGATAGTTACTGACG+AGG 0.703945 5.4:-19111603 MS.gene98477:CDS
TCAAATGGAGAATGTTACGG+TGG 0.704464 5.4:-19110859 MS.gene98477:CDS
GCAAGGCTCAACAACTTACG+AGG 0.705490 5.4:-19110279 MS.gene98477:CDS
GACATGGAAGAAGACGAATG+TGG 0.712607 5.4:-19110942 MS.gene98477:CDS
AATGAAAATTGCCAACATCG+AGG 0.719995 5.4:-19109572 MS.gene98477:CDS
TTTGGTGGAGGAACTCTCCG+AGG 0.722909 5.4:-19112104 MS.gene98477:CDS
CCTCATCATAGTCATCCTCG+TGG 0.737107 5.4:+19110154 None:intergenic
AATGACATGTGGCTGAAACG+TGG 0.744099 5.4:+19111376 None:intergenic
TACGTTAAGATGGAACCACG+AGG 0.812885 5.4:-19110169 MS.gene98477:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTATTTTTAAGTTGA+CGG + chr5.4:19109349-19109368 None:intergenic 10.0%
!! AAAAATAAAAAATGTCATAG+AGG - chr5.4:19109356-19109375 MS.gene98477:CDS 15.0%
!! AAAATAAAAAATGTCATAGA+GGG - chr5.4:19109357-19109376 MS.gene98477:CDS 15.0%
!! TAAGCATATAAAAAATAAAC+AGG - chr5.4:19112299-19112318 MS.gene98477:CDS 15.0%
!!! TTTTTTATATGCTTAATTTG+TGG + chr5.4:19112294-19112313 None:intergenic 15.0%
!! AAGATATTAATGACATCTAA+TGG - chr5.4:19109795-19109814 MS.gene98477:CDS 20.0%
!! AATTGAACAGAAAATTATGA+TGG - chr5.4:19110088-19110107 MS.gene98477:CDS 20.0%
!! TTTGAATATTTGACTATAAG+TGG + chr5.4:19110696-19110715 None:intergenic 20.0%
!!! AATATACATGAAGTTTTGAA+AGG + chr5.4:19111627-19111646 None:intergenic 20.0%
!!! TAACTTGTCTATAGTATTAA+GGG + chr5.4:19110822-19110841 None:intergenic 20.0%
! AAGCAAATCAAAGATAACTT+TGG - chr5.4:19109624-19109643 MS.gene98477:CDS 25.0%
! AATTAGTTCATCAATGTTCT+TGG + chr5.4:19110918-19110937 None:intergenic 25.0%
! AGAAACTTGTCATTAAAGAT+TGG - chr5.4:19111857-19111876 MS.gene98477:CDS 25.0%
! ATTAGTTCATCAATGTTCTT+GGG + chr5.4:19110917-19110936 None:intergenic 25.0%
! TAAAACCGAAAAAGATTTAC+CGG - chr5.4:19111591-19111610 MS.gene98477:CDS 25.0%
! TAAAATCAAAAGAAGCTCTT+AGG + chr5.4:19110556-19110575 None:intergenic 25.0%
! TATATTGCTGATGAAAAAGA+TGG - chr5.4:19111457-19111476 MS.gene98477:CDS 25.0%
! TATTTCAAAGTTTGATGTGA+AGG - chr5.4:19110061-19110080 MS.gene98477:CDS 25.0%
!! AAAAACCGGTAAATCTTTTT+CGG + chr5.4:19111599-19111618 None:intergenic 25.0%
!! AGTTTTCAATGTTAAGACTT+TGG + chr5.4:19111930-19111949 None:intergenic 25.0%
!! GTAACTTGTCTATAGTATTA+AGG + chr5.4:19110823-19110842 None:intergenic 25.0%
!! TCATTGTTTTCAAAAATTCG+TGG - chr5.4:19110032-19110051 MS.gene98477:CDS 25.0%
!!! AAAATTATGATGGATTGGAA+TGG - chr5.4:19110098-19110117 MS.gene98477:CDS 25.0%
!!! AACAGAAAATTATGATGGAT+TGG - chr5.4:19110093-19110112 MS.gene98477:CDS 25.0%
!!! TAAAGCATTGAAAAAATTGG+AGG - chr5.4:19112194-19112213 MS.gene98477:CDS 25.0%
!!! TCCAATTTTTTCAATGCTTT+AGG + chr5.4:19112195-19112214 None:intergenic 25.0%
!!! TCCTAAAGCATTGAAAAAAT+TGG - chr5.4:19112191-19112210 MS.gene98477:CDS 25.0%
!!! TTTTTATGAGAGGAGTATTA+AGG + chr5.4:19109143-19109162 None:intergenic 25.0%
AAAAGAAAAACTCCCGTATT+GGG - chr5.4:19109094-19109113 MS.gene98477:CDS 30.0%
AACGTGGTAAAAATAGTATC+TGG + chr5.4:19109969-19109988 None:intergenic 30.0%
AAGACATTGCCAAAATCTAT+TGG - chr5.4:19110764-19110783 MS.gene98477:CDS 30.0%
AAGTATTTGATCCAATACTC+TGG + chr5.4:19111826-19111845 None:intergenic 30.0%
ACTGAGAGCAATTTATATTG+TGG - chr5.4:19111279-19111298 MS.gene98477:CDS 30.0%
ACTTGTCATTAAAGATTGGA+AGG - chr5.4:19111861-19111880 MS.gene98477:CDS 30.0%
AGACATTGCCAAAATCTATT+GGG - chr5.4:19110765-19110784 MS.gene98477:CDS 30.0%
AGATCAAATGGAGAATGTTA+CGG - chr5.4:19110496-19110515 MS.gene98477:CDS 30.0%
AGTATTTCAACGACTTTGTT+GGG - chr5.4:19110378-19110397 MS.gene98477:CDS 30.0%
ATTTATATTGTGGGGTACAT+AGG - chr5.4:19111289-19111308 MS.gene98477:CDS 30.0%
CAACCTAACAGTAATATTGT+TGG + chr5.4:19109862-19109881 None:intergenic 30.0%
CAATTTCAACGTTTGCAAAT+TGG + chr5.4:19110867-19110886 None:intergenic 30.0%
CTGAGAGCAATTTATATTGT+GGG - chr5.4:19111280-19111299 MS.gene98477:CDS 30.0%
GATGATGATAATTATCTCAC+AGG - chr5.4:19111145-19111164 MS.gene98477:CDS 30.0%
TCAAATTGTCCAGTATAACA+AGG + chr5.4:19109734-19109753 None:intergenic 30.0%
TCAAATTTCTCGAACTTCTA+AGG - chr5.4:19111419-19111438 MS.gene98477:CDS 30.0%
TCACCTCTCAAGTATTAAAT+GGG - chr5.4:19111966-19111985 MS.gene98477:CDS 30.0%
TCTCATAAAAATTCAAACCG+CGG - chr5.4:19109152-19109171 MS.gene98477:CDS 30.0%
TGAGAGCAATTTATATTGTG+GGG - chr5.4:19111281-19111300 MS.gene98477:CDS 30.0%
TGTCAATGATCTGAATGATT+TGG - chr5.4:19109236-19109255 MS.gene98477:CDS 30.0%
TTAGAAGTTCGAGAAATTTG+AGG + chr5.4:19111420-19111439 None:intergenic 30.0%
TTCACCTCTCAAGTATTAAA+TGG - chr5.4:19111965-19111984 MS.gene98477:CDS 30.0%
TTGCCAACAATATTACTGTT+AGG - chr5.4:19109856-19109875 MS.gene98477:CDS 30.0%
TTGGGGATATGAATAATTTG+AGG - chr5.4:19110783-19110802 MS.gene98477:CDS 30.0%
! ATTTTGTTCATTGTTTCCTC+GGG - chr5.4:19110259-19110278 MS.gene98477:CDS 30.0%
! CATTTTGTTCATTGTTTCCT+CGG - chr5.4:19110258-19110277 MS.gene98477:CDS 30.0%
! CTTTTCTCCCAATTATAGAT+GGG + chr5.4:19109479-19109498 None:intergenic 30.0%
! TATTTCTGAATGTGACAAGT+TGG - chr5.4:19112161-19112180 MS.gene98477:CDS 30.0%
! TCTGCATACTTTGATCATTT+TGG - chr5.4:19112218-19112237 MS.gene98477:CDS 30.0%
! TCTTCCATGTCTTTGAAAAT+AGG + chr5.4:19110407-19110426 None:intergenic 30.0%
! TCTTTTCTCCCAATTATAGA+TGG + chr5.4:19109480-19109499 None:intergenic 30.0%
! TTCATATCCCCAATAGATTT+TGG + chr5.4:19110776-19110795 None:intergenic 30.0%
! TTTTCTCCCAATTATAGATG+GGG + chr5.4:19109478-19109497 None:intergenic 30.0%
!! AAACACAACTTTTGATTCCT+CGG + chr5.4:19110236-19110255 None:intergenic 30.0%
!! ATAACTTTGGCTTGCAAATT+TGG - chr5.4:19109637-19109656 MS.gene98477:CDS 30.0%
!! CAAATTGGTTAGCTTGATAA+TGG + chr5.4:19110852-19110871 None:intergenic 30.0%
!! CAAATTTGGATTGATGATGT+GGG - chr5.4:19109651-19109670 MS.gene98477:CDS 30.0%
!! GGAGTTTCTAGAATATCTTA+AGG - chr5.4:19110190-19110209 MS.gene98477:CDS 30.0%
!! GTTAGCTTGATAATGGAATT+TGG + chr5.4:19110845-19110864 None:intergenic 30.0%
!!! AGCTTCTTTTGATTTTAGCT+TGG - chr5.4:19110559-19110578 MS.gene98477:CDS 30.0%
!!! CAGTTTTGAATTTTCCCTTA+TGG + chr5.4:19112019-19112038 None:intergenic 30.0%
!!! TTTGCCTTTTGAAACAAAGA+AGG + chr5.4:19110605-19110624 None:intergenic 30.0%
AAAACTGAAGACTCTTCCAT+TGG - chr5.4:19112032-19112051 MS.gene98477:CDS 35.0%
AAACTGAAGACTCTTCCATT+GGG - chr5.4:19112033-19112052 MS.gene98477:CDS 35.0%
AAGTCATCTACTTCTGTTGA+AGG - chr5.4:19109699-19109718 MS.gene98477:CDS 35.0%
AATGAAAATTGCCAACATCG+AGG - chr5.4:19111786-19111805 MS.gene98477:CDS 35.0%
ACAGGTAAAAATCAACTCCA+GGG - chr5.4:19111163-19111182 MS.gene98477:CDS 35.0%
ACGATTCGTATCAGATCAAA+TGG - chr5.4:19110484-19110503 MS.gene98477:CDS 35.0%
AGATTCCACTTCATTAAGCA+CGG + chr5.4:19110009-19110028 None:intergenic 35.0%
AGTTATGAAGCTGAAGATCT+TGG + chr5.4:19112080-19112099 None:intergenic 35.0%
ATAAATTGCTCTCAGTTCAG+AGG + chr5.4:19111275-19111294 None:intergenic 35.0%
ATTGTTGGATTTGCAGGAAT+CGG - chr5.4:19109567-19109586 MS.gene98477:CDS 35.0%
CAAGATGTGAAATTTCCAAG+TGG + chr5.4:19111105-19111124 None:intergenic 35.0%
CCAATTTCTCAAGTGATTTG+AGG + chr5.4:19112140-19112159 None:intergenic 35.0%
CCTCAAATCACTTGAGAAAT+TGG - chr5.4:19112137-19112156 MS.gene98477:CDS 35.0%
CTACTTGAAACAATACGTCA+TGG - chr5.4:19111727-19111746 MS.gene98477:CDS 35.0%
CTCTCAAGTATTAAATGGGA+AGG - chr5.4:19111970-19111989 MS.gene98477:CDS 35.0%
CTTCCCATTTAATACTTGAG+AGG + chr5.4:19111972-19111991 None:intergenic 35.0%
GAAAAGAAAAACTCCCGTAT+TGG - chr5.4:19109093-19109112 MS.gene98477:CDS 35.0%
GACATTGCCAAAATCTATTG+GGG - chr5.4:19110766-19110785 MS.gene98477:CDS 35.0%
GAGTATTTCAACGACTTTGT+TGG - chr5.4:19110377-19110396 MS.gene98477:CDS 35.0%
GCAGTTTAGTTGAAACTTCT+TGG + chr5.4:19109386-19109405 None:intergenic 35.0%
GCTGTGAATGATATCAAGAA+AGG + chr5.4:19110128-19110147 None:intergenic 35.0%
TAAATTGCTCTCAGTTCAGA+GGG + chr5.4:19111274-19111293 None:intergenic 35.0%
TAGGTAAAACACTTCCGTAT+TGG - chr5.4:19111308-19111327 MS.gene98477:CDS 35.0%
TATTTGATCCAATACTCTGG+TGG + chr5.4:19111823-19111842 None:intergenic 35.0%
TCAAAAGGCAAAGAAGCTAA+GGG - chr5.4:19110613-19110632 MS.gene98477:CDS 35.0%
TCAGACAAAGAAGTCATTTG+AGG + chr5.4:19112105-19112124 None:intergenic 35.0%
TCCATGTAAGGAAACCAATA+CGG + chr5.4:19111325-19111344 None:intergenic 35.0%
TCGAGAGATTAATTCATCTC+TGG - chr5.4:19110297-19110316 MS.gene98477:CDS 35.0%
TCTACTTCTGTTGAAGGAAA+AGG - chr5.4:19109705-19109724 MS.gene98477:CDS 35.0%
TGCTTAATGAAGTGGAATCT+TGG - chr5.4:19110009-19110028 MS.gene98477:CDS 35.0%
TTAACAAGCGATTCCATGTA+AGG + chr5.4:19111337-19111356 None:intergenic 35.0%
TTCAAAAGGCAAAGAAGCTA+AGG - chr5.4:19110612-19110631 MS.gene98477:CDS 35.0%
TTCAAAGTTTGATGTGAAGG+AGG - chr5.4:19110064-19110083 MS.gene98477:CDS 35.0%
TTGCATCTTCCAAAAGAGAA+TGG + chr5.4:19110639-19110658 None:intergenic 35.0%
TTTGAAAGGCAAGCAAAAAC+CGG + chr5.4:19111613-19111632 None:intergenic 35.0%
! AAAAGGCAACCTTGTTATAC+TGG - chr5.4:19109722-19109741 MS.gene98477:CDS 35.0%
! AAGTGATTTGAGGTTGTCTA+TGG + chr5.4:19112130-19112149 None:intergenic 35.0%
! ACGGGAGTTTTTCTTTTCAA+GGG + chr5.4:19109091-19109110 None:intergenic 35.0%
! AGTTCGAGAAATTTGAGGTT+TGG + chr5.4:19111415-19111434 None:intergenic 35.0%
! CAATGATCTGAATGATTTGG+TGG - chr5.4:19109239-19109258 MS.gene98477:CDS 35.0%
! GATGCCTATTTTCAAAGACA+TGG - chr5.4:19110400-19110419 MS.gene98477:CDS 35.0%
! GCGGTTTGAATTTTTATGAG+AGG + chr5.4:19109153-19109172 None:intergenic 35.0%
! TACGGGAGTTTTTCTTTTCA+AGG + chr5.4:19109092-19109111 None:intergenic 35.0%
! TCCACCTTCTTTGTTTCAAA+AGG - chr5.4:19110598-19110617 MS.gene98477:CDS 35.0%
! TGACGTATTGTTTCAAGTAG+TGG + chr5.4:19111727-19111746 None:intergenic 35.0%
!! AATGTTAAGACTTTGGAGTG+AGG + chr5.4:19111923-19111942 None:intergenic 35.0%
!! ATTTCTCGAACTTCTAAGGT+TGG - chr5.4:19111423-19111442 MS.gene98477:CDS 35.0%
!! GAGTTTTTCTTTTCAAGGGA+AGG + chr5.4:19109087-19109106 None:intergenic 35.0%
!! GCAAATTTGGATTGATGATG+TGG - chr5.4:19109650-19109669 MS.gene98477:CDS 35.0%
!! TAAAGAAGTATCGGAGAAGA+CGG - chr5.4:19109434-19109453 MS.gene98477:CDS 35.0%
!! TGGTGTTTTTGTGGAAGTTA+AGG + chr5.4:19109895-19109914 None:intergenic 35.0%
!! TTTAGCTTGGATGTTTCACA+TGG - chr5.4:19110572-19110591 MS.gene98477:CDS 35.0%
!!! TTTTTAAGTTGACGGCTTTG+AGG + chr5.4:19109341-19109360 None:intergenic 35.0%
AAAGAGAGACCACTTCTATG+AGG + chr5.4:19109291-19109310 None:intergenic 40.0%
AACTGAGATAGTTACTGACG+AGG - chr5.4:19109755-19109774 MS.gene98477:CDS 40.0%
AATTTGTGGCCAATCATCAC+CGG + chr5.4:19112280-19112299 None:intergenic 40.0%
ACAAACGCTTTCTCTCTTTG+TGG - chr5.4:19111018-19111037 MS.gene98477:CDS 40.0%
ACATCTTGAAAGATCCAGCT+TGG - chr5.4:19111117-19111136 MS.gene98477:CDS 40.0%
ACCTGCGTTCTTTAACCATA+AGG - chr5.4:19112001-19112020 MS.gene98477:CDS 40.0%
AGTTGGCCCCATCTATAATT+GGG - chr5.4:19109469-19109488 MS.gene98477:CDS 40.0%
AGTTTACTTTCCATCCTTGG+AGG - chr5.4:19111519-19111538 MS.gene98477:CDS 40.0%
ATCTTGTTCAACACAGATCC+TGG - chr5.4:19109519-19109538 MS.gene98477:CDS 40.0%
ATGTCTTGATTCCCATGTCA+TGG + chr5.4:19110751-19110770 None:intergenic 40.0%
ATTGTCCTAACCTCAGGAAA+TGG - chr5.4:19111557-19111576 MS.gene98477:CDS 40.0%
CACAGGTAAAAATCAACTCC+AGG - chr5.4:19111162-19111181 MS.gene98477:CDS 40.0%
CCATTGATGAAATCCTTGCA+AGG - chr5.4:19109058-19109077 MS.gene98477:CDS 40.0%
CCTGCGTTCTTTAACCATAA+GGG - chr5.4:19112002-19112021 MS.gene98477:CDS 40.0%
CCTTGCAAGGATTTCATCAA+TGG + chr5.4:19109061-19109080 None:intergenic 40.0%
CGTCGTTAAAGATCTGACTA+AGG - chr5.4:19110166-19110185 MS.gene98477:CDS 40.0%
CGTTAAAGATCTGACTAAGG+AGG - chr5.4:19110169-19110188 MS.gene98477:CDS 40.0%
GAAAAAGTGGCATGCAAGTT+AGG + chr5.4:19111660-19111679 None:intergenic 40.0%
GAAGAAGAAGAAGCAGACAA+GGG + chr5.4:19109924-19109943 None:intergenic 40.0%
GATCATTGACAGCAGTCTTA+AGG + chr5.4:19109227-19109246 None:intergenic 40.0%
GATTCCACTTCATTAAGCAC+GGG + chr5.4:19110008-19110027 None:intergenic 40.0%
GATTCCTGCAAATCCAACAA+TGG + chr5.4:19109568-19109587 None:intergenic 40.0%
GTCAGATGATCGAAACCTTT+GGG + chr5.4:19111901-19111920 None:intergenic 40.0%
GTCTCAATGTTATCTACTCG+AGG - chr5.4:19110886-19110905 MS.gene98477:CDS 40.0%
GTCTTCTCCGATACTTCTTT+AGG + chr5.4:19109435-19109454 None:intergenic 40.0%
GTTACCATTGTTGGATTTGC+AGG - chr5.4:19109561-19109580 MS.gene98477:CDS 40.0%
GTTTCTGTGGTTACCATTGT+TGG - chr5.4:19109552-19109571 MS.gene98477:CDS 40.0%
TCAAATGGAGAATGTTACGG+TGG - chr5.4:19110499-19110518 MS.gene98477:CDS 40.0%
TCATCAAGACCAGGAAAAAG+TGG + chr5.4:19111673-19111692 None:intergenic 40.0%
TCTCTCTTTGTGGTTAGTGA+GGG - chr5.4:19111028-19111047 MS.gene98477:CDS 40.0%
TGAGGTTTGGAAGTTCATCA+AGG + chr5.4:19111402-19111421 None:intergenic 40.0%
TGCAGTTTACTTTCCATCCT+TGG - chr5.4:19111516-19111535 MS.gene98477:CDS 40.0%
TTCTCCGATACTTCTTTAGG+CGG + chr5.4:19109432-19109451 None:intergenic 40.0%
TTCTCTCTTTGTGGTTAGTG+AGG - chr5.4:19111027-19111046 MS.gene98477:CDS 40.0%
TTGAAACAATACGTCATGGC+AGG - chr5.4:19111731-19111750 MS.gene98477:CDS 40.0%
TTGGAAGTTCATCAAGGTGT+GGG + chr5.4:19111396-19111415 None:intergenic 40.0%
TTGTTGGATTTGCAGGAATC+GGG - chr5.4:19109568-19109587 MS.gene98477:CDS 40.0%
TTTGGAAGTTCATCAAGGTG+TGG + chr5.4:19111397-19111416 None:intergenic 40.0%
! ACATCGATTAAATGATCCCG+AGG + chr5.4:19110278-19110297 None:intergenic 40.0%
! CTCGCATAAGTTTTCTTCTG+TGG + chr5.4:19110360-19110379 None:intergenic 40.0%
! GATCTAAAGTCTCTTCCCAA+AGG - chr5.4:19111883-19111902 MS.gene98477:CDS 40.0%
! GGCAAGAATTTTACTACGTG+TGG + chr5.4:19109841-19109860 None:intergenic 40.0%
! GTAACCACAGAAACTTTTCC+AGG + chr5.4:19109546-19109565 None:intergenic 40.0%
! GTTGCTTTGTAAACACCCAA+TGG + chr5.4:19112051-19112070 None:intergenic 40.0%
! TAGTCCGCCTAAAGAAGTAT+CGG - chr5.4:19109425-19109444 MS.gene98477:CDS 40.0%
! TGATGAAGAGCTAGTTCTCA+CGG - chr5.4:19111687-19111706 MS.gene98477:CDS 40.0%
! TTGAAGCATCTTGAGCTAGA+TGG - chr5.4:19110941-19110960 MS.gene98477:CDS 40.0%
!! TCCGTATTGGTTTCCTTACA+TGG - chr5.4:19111321-19111340 MS.gene98477:CDS 40.0%
!! TGATCTGAATGATTTGGTGG+AGG - chr5.4:19109242-19109261 MS.gene98477:CDS 40.0%
!! TGTTGTTTCAGTTTCACGCA+TGG + chr5.4:19109946-19109965 None:intergenic 40.0%
!!! GCCTTTTGAAACAAAGAAGG+TGG + chr5.4:19110602-19110621 None:intergenic 40.0%
AATACGTCATGGCAGGAGAA+AGG - chr5.4:19111738-19111757 MS.gene98477:CDS 45.0%
AATGACATGTGGCTGAAACG+TGG + chr5.4:19109985-19110004 None:intergenic 45.0%
AATGCTGGATCTCCATGACA+TGG - chr5.4:19110736-19110755 MS.gene98477:CDS 45.0%
AATGTTACGGTGGATCCAGA+AGG - chr5.4:19110509-19110528 MS.gene98477:CDS 45.0%
ATACGTCATGGCAGGAGAAA+GGG - chr5.4:19111739-19111758 MS.gene98477:CDS 45.0%
ATGCTGGATCTCCATGACAT+GGG - chr5.4:19110737-19110756 MS.gene98477:CDS 45.0%
ATGTTACGGTGGATCCAGAA+GGG - chr5.4:19110510-19110529 MS.gene98477:CDS 45.0%
ATTCATCTCTGGACAGCAGA+AGG - chr5.4:19110308-19110327 MS.gene98477:CDS 45.0%
ATTGTGAGTTCCTCCAAGGA+TGG + chr5.4:19111532-19111551 None:intergenic 45.0%
CATTCCCGTGCTTAATGAAG+TGG - chr5.4:19110001-19110020 MS.gene98477:CDS 45.0%
CCCTTATGGTTAAAGAACGC+AGG + chr5.4:19112005-19112024 None:intergenic 45.0%
CTCTCTTTGTGGTTAGTGAG+GGG - chr5.4:19111029-19111048 MS.gene98477:CDS 45.0%
CTTATCCTCGAAGATGAGAC+GGG + chr5.4:19109607-19109626 None:intergenic 45.0%
GAAGGGGAAAATGTTCGTGA+AGG - chr5.4:19110527-19110546 MS.gene98477:CDS 45.0%
GACATGGAAGAAGACGAATG+TGG - chr5.4:19110416-19110435 MS.gene98477:CDS 45.0%
GAGGCGACTATTATGATGAC+TGG + chr5.4:19109322-19109341 None:intergenic 45.0%
GAGTTGGCCCCATCTATAAT+TGG - chr5.4:19109468-19109487 MS.gene98477:CDS 45.0%
GATACTACAACGAACTTCCG+AGG - chr5.4:19110216-19110235 MS.gene98477:CDS 45.0%
GATCTGATACGAATCGTGCT+AGG + chr5.4:19110481-19110500 None:intergenic 45.0%
GCTTATCCTCGAAGATGAGA+CGG + chr5.4:19109608-19109627 None:intergenic 45.0%
GGAAGAAGAAGAAGCAGACA+AGG + chr5.4:19109925-19109944 None:intergenic 45.0%
GGTCAGATGATCGAAACCTT+TGG + chr5.4:19111902-19111921 None:intergenic 45.0%
TACGTTAAGATGGAACCACG+AGG - chr5.4:19111189-19111208 MS.gene98477:CDS 45.0%
TCCAGGGTCTTACGTTAAGA+TGG - chr5.4:19111179-19111198 MS.gene98477:CDS 45.0%
TCCATCTTAACGTAAGACCC+TGG + chr5.4:19111183-19111202 None:intergenic 45.0%
TCTCAGATTGTCCTAACCTC+AGG - chr5.4:19111551-19111570 MS.gene98477:CDS 45.0%
TCTTGAGCTAGATGGATGCT+TGG - chr5.4:19110949-19110968 MS.gene98477:CDS 45.0%
TGAGATTGTGAGTTCCTCCA+AGG + chr5.4:19111536-19111555 None:intergenic 45.0%
TGGACCTGGAAAAGTTTCTG+TGG - chr5.4:19109539-19109558 MS.gene98477:CDS 45.0%
TGTCATGGAGATCCAGCATT+CGG + chr5.4:19110736-19110755 None:intergenic 45.0%
TTAAGCACGGGAATGACATG+TGG + chr5.4:19109996-19110015 None:intergenic 45.0%
TTCCACCATTTCCTGAGGTT+AGG + chr5.4:19111565-19111584 None:intergenic 45.0%
! ACAGAAACTTTTCCAGGTCC+AGG + chr5.4:19109540-19109559 None:intergenic 45.0%
! ACTACTGGTGGTAGTGTTCT+TGG + chr5.4:19109409-19109428 None:intergenic 45.0%
! ACTAGCTCTTCATCAAGACC+AGG + chr5.4:19111682-19111701 None:intergenic 45.0%
! AGCTAAGGGCCATTCTCTTT+TGG - chr5.4:19110627-19110646 MS.gene98477:CDS 45.0%
! AGTTTTCGACAGCCCAATAC+GGG + chr5.4:19109109-19109128 None:intergenic 45.0%
! ATAGTTACTGACGAGGTGCT+TGG - chr5.4:19109762-19109781 MS.gene98477:CDS 45.0%
! CAGTTTTCGACAGCCCAATA+CGG + chr5.4:19109110-19109129 None:intergenic 45.0%
! CTACTGGTGGTAGTGTTCTT+GGG + chr5.4:19109408-19109427 None:intergenic 45.0%
! GATGAAGAGCTAGTTCTCAC+GGG - chr5.4:19111688-19111707 MS.gene98477:CDS 45.0%
! GCATTTTCCACCATTTCCTG+AGG + chr5.4:19111570-19111589 None:intergenic 45.0%
! TAGATGACTTGTGTGCAGCA+CGG + chr5.4:19109689-19109708 None:intergenic 45.0%
! TCACGAACATTTTCCCCTTC+TGG + chr5.4:19110527-19110546 None:intergenic 45.0%
! TCCAGCTTGTATAGTTTGCG+AGG + chr5.4:19110989-19111008 None:intergenic 45.0%
!! ATTGCACCTTGTTGTTGCCA+AGG - chr5.4:19112241-19112260 MS.gene98477:CDS 45.0%
!! TACTTCTTTAGGCGGACTAC+TGG + chr5.4:19109424-19109443 None:intergenic 45.0%
!!! ACTTGCATGCCACTTTTTCC+TGG - chr5.4:19111661-19111680 MS.gene98477:CDS 45.0%
AGCCAGATACCGGTGATGAT+TGG - chr5.4:19112268-19112287 MS.gene98477:CDS 50.0%
AGTGGCATGCAAGTTAGGTC+AGG + chr5.4:19111655-19111674 None:intergenic 50.0%
ATCATCATCGTCGTCCAAGC+TGG + chr5.4:19111134-19111153 None:intergenic 50.0%
ATGAGGCGTGGCATAATCCT+CGG + chr5.4:19109274-19109293 None:intergenic 50.0%
ATTGCTCTCAGTTCAGAGGG+AGG + chr5.4:19111271-19111290 None:intergenic 50.0%
CAACAACTTACGAGGCCACT+TGG - chr5.4:19111087-19111106 MS.gene98477:CDS 50.0%
CCACGAGGATGACTATGATG+AGG - chr5.4:19111204-19111223 MS.gene98477:CDS 50.0%
CCTCATCATAGTCATCCTCG+TGG + chr5.4:19111207-19111226 None:intergenic 50.0%
CGAGGATGACTATGATGAGG+AGG - chr5.4:19111207-19111226 MS.gene98477:CDS 50.0%
CGTGCTAGGTCGTGCATTAA+GGG + chr5.4:19110467-19110486 None:intergenic 50.0%
CTGACACCTTGGCAACAACA+AGG + chr5.4:19112250-19112269 None:intergenic 50.0%
GAAGAAGCAGACAAGGGTTG+TGG + chr5.4:19109918-19109937 None:intergenic 50.0%
GATGCAAACGTTGCTTCCGA+AGG - chr5.4:19110652-19110671 MS.gene98477:CDS 50.0%
GCAAGGCTCAACAACTTACG+AGG - chr5.4:19111079-19111098 MS.gene98477:CDS 50.0%
GCCTCGCAAACTATACAAGC+TGG - chr5.4:19110985-19111004 MS.gene98477:CDS 50.0%
GTCCTAACCTCAGGAAATGG+TGG - chr5.4:19111560-19111579 MS.gene98477:CDS 50.0%
GTCGATCACCACCAGAGTAT+TGG - chr5.4:19111812-19111831 MS.gene98477:CDS 50.0%
GTGCTCGTGTTCATGTCCTT+CGG + chr5.4:19110671-19110690 None:intergenic 50.0%
GTGGCATGCAAGTTAGGTCA+GGG + chr5.4:19111654-19111673 None:intergenic 50.0%
TATGCCACGCCTCATAGAAG+TGG - chr5.4:19109279-19109298 MS.gene98477:CDS 50.0%
TCGTGCTAGGTCGTGCATTA+AGG + chr5.4:19110468-19110487 None:intergenic 50.0%
TGATCGACTGTCCTCGATGT+TGG + chr5.4:19111800-19111819 None:intergenic 50.0%
TGTTACGGTGGATCCAGAAG+GGG - chr5.4:19110511-19110530 MS.gene98477:CDS 50.0%
TTAAGGTTTCGCAGCCAGAC+TGG + chr5.4:19109210-19109229 None:intergenic 50.0%
TTCAACACAGATCCTGGACC+TGG - chr5.4:19109525-19109544 MS.gene98477:CDS 50.0%
! CATTCGGAGAGTGGTCTTGA+AGG + chr5.4:19110720-19110739 None:intergenic 50.0%
! TGACGAGGTGCTTGGTGATT+TGG - chr5.4:19109770-19109789 MS.gene98477:CDS 50.0%
!! AGAAGTATCGGAGAAGACGG+AGG - chr5.4:19109437-19109456 MS.gene98477:CDS 50.0%
!! CAAGGGAAGGTATCCTTGCA+AGG + chr5.4:19109074-19109093 None:intergenic 50.0%
!! GGGTTGTGGTGGTGTTTTTG+TGG + chr5.4:19109904-19109923 None:intergenic 50.0%
!! TTCTTTAGGCGGACTACTGG+TGG + chr5.4:19109421-19109440 None:intergenic 50.0%
CAAGACCACTCTCCGAATGC+TGG - chr5.4:19110721-19110740 MS.gene98477:CDS 55.0%
GAACCACGTCCCAGGTCAAA+AGG - chr5.4:19109179-19109198 MS.gene98477:CDS 55.0%
GAAGCAGACAAGGGTTGTGG+TGG + chr5.4:19109915-19109934 None:intergenic 55.0%
GAGACCACTTCTATGAGGCG+TGG + chr5.4:19109286-19109305 None:intergenic 55.0%
GAGATCCAGCATTCGGAGAG+TGG + chr5.4:19110729-19110748 None:intergenic 55.0%
GGCCAATCATCACCGGTATC+TGG + chr5.4:19112273-19112292 None:intergenic 55.0%
GTCAAAAGGTTCCGCCAGTC+TGG - chr5.4:19109193-19109212 MS.gene98477:CDS 55.0%
GTGTGCAGCACGGTCTTTGA+GGG + chr5.4:19109679-19109698 None:intergenic 55.0%
TACAGCGTGGGTGACCTTAG+CGG - chr5.4:19111052-19111071 MS.gene98477:CDS 55.0%
TGAGCCTTGCAAGTCCGCTA+AGG + chr5.4:19111069-19111088 None:intergenic 55.0%
TGTGTGCAGCACGGTCTTTG+AGG + chr5.4:19109680-19109699 None:intergenic 55.0%
TTTGGTGGAGGAACTCTCCG+AGG - chr5.4:19109254-19109273 MS.gene98477:CDS 55.0%
! ACTGGCGGAACCTTTTGACC+TGG + chr5.4:19109192-19109211 None:intergenic 55.0%
! AGTATCGGAGAAGACGGAGG+TGG - chr5.4:19109440-19109459 MS.gene98477:CDS 55.0%
! CCAAGGTGTCAGCCAGATAC+CGG - chr5.4:19112258-19112277 MS.gene98477:CDS 55.0%
! CTGGCGGAACCTTTTGACCT+GGG + chr5.4:19109191-19109210 None:intergenic 55.0%
! GAACCTTTTGACCTGGGACG+TGG + chr5.4:19109185-19109204 None:intergenic 55.0%
! GTTAGTGAGGGGTACAGCGT+GGG - chr5.4:19111040-19111059 MS.gene98477:CDS 55.0%
!! GTGACCTTAGCGGACTTGCA+AGG - chr5.4:19111062-19111081 MS.gene98477:CDS 55.0%
ACTCGCCCGTCTCATCTTCG+AGG - chr5.4:19109599-19109618 MS.gene98477:CDS 60.0%
AGGTTTCGCAGCCAGACTGG+CGG + chr5.4:19109207-19109226 None:intergenic 60.0%
CCGGTATCTGGCTGACACCT+TGG + chr5.4:19112261-19112280 None:intergenic 60.0%
GACGGAGGTGGAGACAGAGT+TGG - chr5.4:19109452-19109471 MS.gene98477:CDS 60.0%
TGGGACGTGGTTCTTGACCG+CGG + chr5.4:19109172-19109191 None:intergenic 60.0%
! GGTTAGTGAGGGGTACAGCG+TGG - chr5.4:19111039-19111058 MS.gene98477:CDS 60.0%
GCGGTCAAGAACCACGTCCC+AGG - chr5.4:19109171-19109190 MS.gene98477:CDS 65.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 19109033 19112347 19109033 ID=MS.gene98477
chr5.4 mRNA 19109033 19112347 19109033 ID=MS.gene98477.t1;Parent=MS.gene98477
chr5.4 exon 19109033 19112347 19109033 ID=MS.gene98477.t1.exon1;Parent=MS.gene98477.t1
chr5.4 CDS 19109033 19112347 19109033 ID=cds.MS.gene98477.t1;Parent=MS.gene98477.t1
Gene Sequence

>MS.gene98477

ATGGATATAGTTGTTCTGAAAGAAACCATTGATGAAATCCTTGCAAGGATACCTTCCCTTGAAAAGAAAAACTCCCGTATTGGGCTGTCGAAAACTGACATCAACAACCTTAATACTCCTCTCATAAAAATTCAAACCGCGGTCAAGAACCACGTCCCAGGTCAAAAGGTTCCGCCAGTCTGGCTGCGAAACCTTAAGACTGCTGTCAATGATCTGAATGATTTGGTGGAGGAACTCTCCGAGGATTATGCCACGCCTCATAGAAGTGGTCTCTCTTTCTTAAAGACCAGTCATCATAATAGTCGCCTCAAAGCCGTCAACTTAAAAATAAAAAATGTCATAGAGGGCATCCAAGAAGTTTCAACTAAACTGCCCAAGAACACTACCACCAGTAGTCCGCCTAAAGAAGTATCGGAGAAGACGGAGGTGGAGACAGAGTTGGCCCCATCTATAATTGGGAGAAAAGATGAAATCATAGATCAACTTATCTTGTTCAACACAGATCCTGGACCTGGAAAAGTTTCTGTGGTTACCATTGTTGGATTTGCAGGAATCGGGAAGACAAAACTCGCCCGTCTCATCTTCGAGGATAAGCAAATCAAAGATAACTTTGGCTTGCAAATTTGGATTGATGATGTGGGAACCCTCAAAGACCGTGCTGCACACAAGTCATCTACTTCTGTTGAAGGAAAAGGCAACCTTGTTATACTGGACAATTTGAAAACTGAGATAGTTACTGACGAGGTGCTTGGTGATTTGGACAAGATATTAATGACATCTAATGGTTCAAGTGCAATACTCATAACCACACGTAGTAAAATTCTTGCCAACAATATTACTGTTAGGTTGCGTAACATTTCCTTAACTTCCACAAAAACACCACCACAACCCTTGTCTGCTTCTTCTTCTTCCATGCGTGAAACTGAAACAACACCAGATACTATTTTTACCACGTTTCAGCCACATGTCATTCCCGTGCTTAATGAAGTGGAATCTTGGTCATTGTTTTCAAAAATTCGTGGAGAAAGTATTTCAAAGTTTGATGTGAAGGAGGAAATTGAACAGAAAATTATGATGGATTGGAATGGAGTTCCTTTCTTGATATCATTCACAGCAATGTTTCTGAACAATCGCGTCGTTAAAGATCTGACTAAGGAGGAGTTTCTAGAATATCTTAAGGTTAGATACTACAACGAACTTCCGAGGAATCAAAAGTTGTGTTTTTCATTTTGTTCATTGTTTCCTCGGGATCATTTAATCGATGTCGAGAGATTAATTCATCTCTGGACAGCAGAAGGATTTCAATTGAATTTAGAAAACTCAACCACAGAAGAAAACTTATGCGAGTATTTCAACGACTTTGTTGGGATGCCTATTTTCAAAGACATGGAAGAAGACGAATGTGGCGCTGTAAGAAGATGTAGAATGCAACCCTTAATGCACGACCTAGCACGATTCGTATCAGATCAAATGGAGAATGTTACGGTGGATCCAGAAGGGGAAAATGTTCGTGAAGGAGTCCTAAGAGCTTCTTTTGATTTTAGCTTGGATGTTTCACATGGAATTCCACCTTCTTTGTTTCAAAAGGCAAAGAAGCTAAGGGCCATTCTCTTTTGGAAGATGCAAACGTTGCTTCCGAAGGACATGAACACGAGCACTTCCACTTATAGTCAAATATTCAAAACCTTCAAGACCACTCTCCGAATGCTGGATCTCCATGACATGGGAATCAAGACATTGCCAAAATCTATTGGGGATATGAATAATTTGAGGTATATTGACTTGTCCCTTAATACTATAGACAAGTTACCAAATTCCATTATCAAGCTAACCAATTTGCAAACGTTGAAATTGTCTCAATGTTATCTACTCGAGGAATTACCCAAGAACATTGATGAACTAATTAACTTGAAGCATCTTGAGCTAGATGGATGCTTGGCTCTCATTCACATGCCTCGCAAACTATACAAGCTGGAAAATTCTCTACAAACGCTTTCTCTCTTTGTGGTTAGTGAGGGGTACAGCGTGGGTGACCTTAGCGGACTTGCAAGGCTCAACAACTTACGAGGCCACTTGGAAATTTCACATCTTGAAAGATCCAGCTTGGACGACGATGATGATAATTATCTCACAGGTAAAAATCAACTCCAGGGTCTTACGTTAAGATGGAACCACGAGGATGACTATGATGAGGAGGAAGAGAATGCAGACGAATATACACTTGCTTGTCTTGCTCCTCCCTCTGAACTGAGAGCAATTTATATTGTGGGGTACATAGGTAAAACACTTCCGTATTGGTTTCCTTACATGGAATCGCTTGTTAAGTTAAGCTTGTATGACTGTACAAGTTGCATATTTCTCCCACACCTTGATGAACTTCCAAACCTCAAATTTCTCGAACTTCTAAGGTTGGAGAAACTGCAATATATTGCTGATGAAAAAGATGGCGACAATGACAACGACAATGACAATTTACAAGATGCTGCAGTTTACTTTCCATCCTTGGAGGAACTCACAATCTCAGATTGTCCTAACCTCAGGAAATGGTGGAAAATGCATAAAACCGAAAAAGATTTACCGGTTTTTGCTTGCCTTTCAAAACTTCATGTATATTACTGCCCTGACCTAACTTGCATGCCACTTTTTCCTGGTCTTGATGAAGAGCTAGTTCTCACGGGTTCAAGTGTGCAGCCACTACTTGAAACAATACGTCATGGCAGGAGAAAGGGTAATAAGTTTTCTAAACTCAAGTCAATGAAAATTGCCAACATCGAGGACAGTCGATCACCACCAGAGTATTGGATCAAATACTTCAATTCTCTTGAGAAACTTGTCATTAAAGATTGGAAGGATCTAAAGTCTCTTCCCAAAGGTTTCGATCATCTGACCTCACTCCAAAGTCTTAACATTGAAAACTGTCAAGAACTTGATCTTCACCTCTCAAGTATTAAATGGGAAGGTCTGAAAAACCTGCGTTCTTTAACCATAAGGGAAAATTCAAAACTGAAGACTCTTCCATTGGGTGTTTACAAAGCAACATCTCTCCAAGATCTTCAGCTTCATAACTGTCCTCAAATGACTTCTTTGTCTGAAACCATAGACAACCTCAAATCACTTGAGAAATTGGTTATTTCTGAATGTGACAAGTTGGCTTCGCTTCCTAAAGCATTGAAAAAATTGGAGGATCTGCATACTTTGATCATTTTGGATTGCACCTTGTTGTTGCCAAGGTGTCAGCCAGATACCGGTGATGATTGGCCACAAATTAAGCATATAAAAAATAAACAGGTCATGAAAACTAATCCATACATTTAG
Protein sequence

>MS.gene98477.t1

MDIVVLKETIDEILARIPSLEKKNSRIGLSKTDINNLNTPLIKIQTAVKNHVPGQKVPPVWLRNLKTAVNDLNDLVEELSEDYATPHRSGLSFLKTSHHNSRLKAVNLKIKNVIEGIQEVSTKLPKNTTTSSPPKEVSEKTEVETELAPSIIGRKDEIIDQLILFNTDPGPGKVSVVTIVGFAGIGKTKLARLIFEDKQIKDNFGLQIWIDDVGTLKDRAAHKSSTSVEGKGNLVILDNLKTEIVTDEVLGDLDKILMTSNGSSAILITTRSKILANNITVRLRNISLTSTKTPPQPLSASSSSMRETETTPDTIFTTFQPHVIPVLNEVESWSLFSKIRGESISKFDVKEEIEQKIMMDWNGVPFLISFTAMFLNNRVVKDLTKEEFLEYLKVRYYNELPRNQKLCFSFCSLFPRDHLIDVERLIHLWTAEGFQLNLENSTTEENLCEYFNDFVGMPIFKDMEEDECGAVRRCRMQPLMHDLARFVSDQMENVTVDPEGENVREGVLRASFDFSLDVSHGIPPSLFQKAKKLRAILFWKMQTLLPKDMNTSTSTYSQIFKTFKTTLRMLDLHDMGIKTLPKSIGDMNNLRYIDLSLNTIDKLPNSIIKLTNLQTLKLSQCYLLEELPKNIDELINLKHLELDGCLALIHMPRKLYKLENSLQTLSLFVVSEGYSVGDLSGLARLNNLRGHLEISHLERSSLDDDDDNYLTGKNQLQGLTLRWNHEDDYDEEEENADEYTLACLAPPSELRAIYIVGYIGKTLPYWFPYMESLVKLSLYDCTSCIFLPHLDELPNLKFLELLRLEKLQYIADEKDGDNDNDNDNLQDAAVYFPSLEELTISDCPNLRKWWKMHKTEKDLPVFACLSKLHVYYCPDLTCMPLFPGLDEELVLTGSSVQPLLETIRHGRRKGNKFSKLKSMKIANIEDSRSPPEYWIKYFNSLEKLVIKDWKDLKSLPKGFDHLTSLQSLNIENCQELDLHLSSIKWEGLKNLRSLTIRENSKLKTLPLGVYKATSLQDLQLHNCPQMTSLSETIDNLKSLEKLVISECDKLASLPKALKKLEDLHTLIILDCTLLLPRCQPDTGDDWPQIKHIKNKQVMKTNPYI