Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98977.t1 | XP_013466581.1 | 96.9 | 351 | 10 | 1 | 1 | 351 | 1 | 350 | 2.50E-175 | 624.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98977.t1 | Q8GUU2 | 62.8 | 339 | 121 | 2 | 13 | 347 | 17 | 354 | 1.3e-116 | 421.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98977.t1 | A0A072VGQ3 | 96.9 | 351 | 10 | 1 | 1 | 351 | 1 | 350 | 1.8e-175 | 624.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene98977 | MS.gene41778 | PPI |
| MS.gene98977 | MS.gene067859 | PPI |
| MS.gene98977 | MS.gene04154 | PPI |
| MS.gene98977 | MS.gene042467 | PPI |
| MS.gene98977 | MS.gene08162 | PPI |
| MS.gene98977 | MS.gene04341 | PPI |
| MS.gene98977 | MS.gene070293 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98977.t1 | MTR_1g032440 | 97.436 | 351 | 8 | 1 | 1 | 351 | 1 | 350 | 0.0 | 708 |
| MS.gene98977.t1 | MTR_1g032440 | 97.315 | 298 | 7 | 1 | 1 | 298 | 1 | 297 | 0.0 | 591 |
| MS.gene98977.t1 | MTR_8g105330 | 70.349 | 344 | 84 | 6 | 11 | 351 | 8 | 336 | 3.11e-170 | 477 |
| MS.gene98977.t1 | MTR_4g102870 | 48.913 | 368 | 157 | 11 | 12 | 351 | 7 | 371 | 2.70e-113 | 334 |
| MS.gene98977.t1 | MTR_5g010720 | 47.872 | 376 | 163 | 7 | 9 | 351 | 12 | 387 | 2.22e-100 | 301 |
| MS.gene98977.t1 | MTR_7g076010 | 50.799 | 313 | 145 | 5 | 42 | 348 | 51 | 360 | 1.70e-89 | 273 |
| MS.gene98977.t1 | MTR_7g088500 | 45.424 | 295 | 121 | 5 | 65 | 351 | 35 | 297 | 4.59e-79 | 244 |
| MS.gene98977.t1 | MTR_1g011380 | 32.075 | 318 | 177 | 9 | 59 | 344 | 75 | 385 | 7.04e-41 | 148 |
| MS.gene98977.t1 | MTR_3g107995 | 30.872 | 298 | 178 | 8 | 70 | 344 | 69 | 361 | 3.20e-38 | 140 |
| MS.gene98977.t1 | MTR_7g088560 | 39.583 | 192 | 97 | 4 | 169 | 348 | 1 | 185 | 3.82e-35 | 127 |
| MS.gene98977.t1 | MTR_7g088570 | 39.500 | 200 | 102 | 5 | 164 | 351 | 102 | 294 | 5.35e-33 | 124 |
| MS.gene98977.t1 | MTR_5g096410 | 25.670 | 261 | 166 | 3 | 84 | 341 | 97 | 332 | 2.01e-23 | 99.4 |
| MS.gene98977.t1 | MTR_5g096410 | 26.437 | 261 | 167 | 3 | 84 | 341 | 97 | 335 | 2.48e-22 | 96.7 |
| MS.gene98977.t1 | MTR_5g096410 | 25.670 | 261 | 157 | 4 | 84 | 341 | 97 | 323 | 1.24e-21 | 94.4 |
| MS.gene98977.t1 | MTR_8g099515 | 32.800 | 125 | 76 | 3 | 225 | 341 | 255 | 379 | 1.12e-12 | 68.9 |
| MS.gene98977.t1 | MTR_8g099495 | 45.070 | 71 | 38 | 1 | 272 | 341 | 319 | 389 | 2.82e-12 | 67.8 |
| MS.gene98977.t1 | MTR_4g116460 | 52.830 | 53 | 23 | 2 | 297 | 347 | 437 | 489 | 2.59e-11 | 65.1 |
| MS.gene98977.t1 | MTR_4g116460 | 52.830 | 53 | 23 | 2 | 297 | 347 | 480 | 532 | 2.59e-11 | 65.1 |
| MS.gene98977.t1 | MTR_8g072020 | 54.545 | 55 | 23 | 2 | 296 | 348 | 401 | 455 | 8.20e-11 | 63.5 |
| MS.gene98977.t1 | MTR_8g072020 | 54.545 | 55 | 23 | 2 | 296 | 348 | 440 | 494 | 8.26e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98977.t1 | AT1G68070 | 68.129 | 342 | 93 | 5 | 12 | 350 | 14 | 342 | 4.36e-169 | 474 |
| MS.gene98977.t1 | AT2G01735 | 65.116 | 344 | 111 | 3 | 11 | 348 | 15 | 355 | 8.22e-159 | 449 |
| MS.gene98977.t1 | AT3G61180 | 51.445 | 346 | 141 | 6 | 28 | 351 | 39 | 379 | 4.80e-118 | 346 |
| MS.gene98977.t1 | AT4G11680 | 54.601 | 326 | 140 | 3 | 27 | 346 | 61 | 384 | 1.97e-109 | 325 |
| MS.gene98977.t1 | AT4G11680 | 49.861 | 361 | 143 | 5 | 27 | 351 | 61 | 419 | 3.85e-103 | 310 |
| MS.gene98977.t1 | AT2G01735 | 65.000 | 240 | 75 | 3 | 11 | 244 | 15 | 251 | 3.38e-102 | 301 |
| MS.gene98977.t1 | AT1G12760 | 51.275 | 353 | 138 | 7 | 27 | 348 | 52 | 401 | 9.18e-101 | 303 |
| MS.gene98977.t1 | AT1G12760 | 51.807 | 332 | 132 | 4 | 42 | 348 | 2 | 330 | 2.67e-100 | 300 |
| MS.gene98977.t1 | AT1G63170 | 51.312 | 343 | 139 | 5 | 32 | 348 | 33 | 373 | 1.24e-94 | 287 |
| MS.gene98977.t1 | AT4G32600 | 29.642 | 307 | 186 | 8 | 70 | 351 | 113 | 414 | 1.77e-41 | 150 |
| MS.gene98977.t1 | AT4G32600 | 29.642 | 307 | 186 | 8 | 70 | 351 | 113 | 414 | 1.77e-41 | 150 |
| MS.gene98977.t1 | AT1G80400 | 29.483 | 329 | 184 | 10 | 54 | 344 | 81 | 399 | 1.33e-39 | 145 |
| MS.gene98977.t1 | AT4G26580 | 27.407 | 270 | 155 | 7 | 81 | 344 | 99 | 333 | 1.97e-24 | 102 |
| MS.gene98977.t1 | AT4G26580 | 27.407 | 270 | 155 | 7 | 81 | 344 | 99 | 333 | 1.97e-24 | 102 |
| MS.gene98977.t1 | AT5G55970 | 27.881 | 269 | 159 | 6 | 81 | 344 | 103 | 341 | 3.57e-23 | 99.0 |
| MS.gene98977.t1 | AT5G55970 | 27.881 | 269 | 159 | 6 | 81 | 344 | 103 | 341 | 3.57e-23 | 99.0 |
| MS.gene98977.t1 | AT1G55530 | 30.769 | 104 | 70 | 1 | 241 | 344 | 133 | 234 | 2.02e-12 | 67.8 |
| MS.gene98977.t1 | AT1G55530 | 32.653 | 98 | 64 | 1 | 247 | 344 | 172 | 267 | 4.42e-12 | 67.0 |
| MS.gene98977.t1 | AT1G55530 | 32.653 | 98 | 64 | 1 | 247 | 344 | 172 | 267 | 4.42e-12 | 67.0 |
| MS.gene98977.t1 | AT5G56340 | 31.915 | 94 | 62 | 1 | 251 | 344 | 212 | 303 | 6.33e-12 | 66.6 |
| MS.gene98977.t1 | AT4G26400 | 35.366 | 82 | 51 | 1 | 268 | 349 | 211 | 290 | 2.58e-11 | 64.7 |
| MS.gene98977.t1 | AT4G26400 | 35.366 | 82 | 51 | 1 | 268 | 349 | 211 | 290 | 2.58e-11 | 64.7 |
Find 97 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATAATTGAAATCTGTATTT+TGG | 0.174750 | 1.4:-16994912 | None:intergenic |
| ATTCTTCATGCATAATAAAA+TGG | 0.229080 | 1.4:+16995807 | MS.gene98977:CDS |
| TGCCATCTTCTGTGTTGTTT+TGG | 0.232051 | 1.4:+16994696 | MS.gene98977:CDS |
| GTATGCACTGGTGGTTTCTC+TGG | 0.310371 | 1.4:-16994979 | None:intergenic |
| AGATGTGAATCAATAAATAC+TGG | 0.336188 | 1.4:+16993774 | MS.gene98977:CDS |
| GCCGCGAATCCCTCCGATTA+CGG | 0.357095 | 1.4:-16991798 | None:intergenic |
| ACTTCCCTCGCTCAGCTTCT+CGG | 0.363663 | 1.4:+16991511 | MS.gene98977:CDS |
| GCTATTCTCTATGCTGTTGC+GGG | 0.374371 | 1.4:+16994766 | MS.gene98977:CDS |
| TTGAGTATCACCGCCGTAAT+CGG | 0.376851 | 1.4:+16991785 | MS.gene98977:CDS |
| ATACTGGGGTTTCATTCCTT+TGG | 0.381940 | 1.4:+16993790 | MS.gene98977:CDS |
| CTGGGGTTTCATTCCTTTGG+TGG | 0.384225 | 1.4:+16993793 | MS.gene98977:CDS |
| CGAAGAGCGTCGTGCCGATT+GGG | 0.393333 | 1.4:+16991594 | MS.gene98977:CDS |
| GATGGTTGCAGGGAAGAGTA+TGG | 0.396930 | 1.4:-16995778 | None:intergenic |
| GGTTTCATTCCTTTGGTGGA+TGG | 0.399167 | 1.4:+16993797 | MS.gene98977:CDS |
| TTCATTCCTTTGGTGGATGG+TGG | 0.402298 | 1.4:+16993800 | MS.gene98977:CDS |
| ATTTATTGATTCACATCTCT+TGG | 0.410823 | 1.4:-16993769 | None:intergenic |
| CGAACATGCCGATCCGCGTT+TGG | 0.419996 | 1.4:+16991713 | MS.gene98977:CDS |
| TCTCTATGCTGTTGCGGGAC+AGG | 0.424869 | 1.4:+16994771 | MS.gene98977:CDS |
| CATGGCGTTCGTTGTGGTGT+CGG | 0.427563 | 1.4:+16991657 | MS.gene98977:CDS |
| AGAAACCACCAGTGCATACT+TGG | 0.436646 | 1.4:+16994983 | MS.gene98977:CDS |
| CAAACGCGGATCGGCATGTT+CGG | 0.442712 | 1.4:-16991712 | None:intergenic |
| TCATTCCTTTGGTGGATGGT+GGG | 0.449593 | 1.4:+16993801 | MS.gene98977:CDS |
| AGAATGGAAATGATGGTTGC+AGG | 0.452786 | 1.4:-16995789 | None:intergenic |
| GGGATTCGCGGCGGAGGCAG+AGG | 0.464438 | 1.4:+16991809 | MS.gene98977:CDS |
| GAGAAGGATAGTGGTGGAGC+TGG | 0.468638 | 1.4:+16994945 | MS.gene98977:CDS |
| AGCTCTACTCCATCTTCATA+TGG | 0.474255 | 1.4:-16995755 | None:intergenic |
| CAGCTTCTCGGACGCGCCAC+CGG | 0.476801 | 1.4:+16991523 | MS.gene98977:CDS |
| TATTCTCAAGGGAAACGAAC+AGG | 0.479763 | 1.4:+16995868 | MS.gene98977:CDS |
| ATCCGTCCTTGTACGCGAAA+CGG | 0.482991 | 1.4:+16991558 | MS.gene98977:CDS |
| TGCTATTCTCTATGCTGTTG+CGG | 0.491315 | 1.4:+16994765 | MS.gene98977:CDS |
| AACAATGAGGAGAAGGATAG+TGG | 0.493619 | 1.4:+16994936 | MS.gene98977:CDS |
| CCGATCCGCGTTTGGATCGT+AGG | 0.496250 | 1.4:+16991721 | MS.gene98977:CDS |
| TCGAAGAGCGTCGTGCCGAT+TGG | 0.496664 | 1.4:+16991593 | MS.gene98977:CDS |
| TGCCAAAACAACACAGAAGA+TGG | 0.498684 | 1.4:-16994698 | None:intergenic |
| CATCATGAAGGCAACGGCGG+TGG | 0.503117 | 1.4:+16991478 | MS.gene98977:CDS |
| AAGATGCTCCACGCTTGTAC+TGG | 0.503612 | 1.4:+16993862 | MS.gene98977:CDS |
| ATCGGAGGGATTCGCGGCGG+AGG | 0.503769 | 1.4:+16991803 | MS.gene98977:CDS |
| CGCCGTTTCGCGTACAAGGA+CGG | 0.504228 | 1.4:-16991560 | None:intergenic |
| GCCGTAATCGGAGGGATTCG+CGG | 0.504663 | 1.4:+16991797 | MS.gene98977:CDS |
| GACGGATGGTCCTCTTCGTC+CGG | 0.505847 | 1.4:-16991542 | None:intergenic |
| GCTCGACATGTCGTGGAACA+TGG | 0.511175 | 1.4:+16991639 | MS.gene98977:CDS |
| GCGCCGCCGTTTCGCGTACA+AGG | 0.514353 | 1.4:-16991564 | None:intergenic |
| TTGTAAGTACAATATTCTCA+AGG | 0.522566 | 1.4:+16995856 | MS.gene98977:CDS |
| GGAAATCATACCGCATCCTC+AGG | 0.524464 | 1.4:-16995026 | None:intergenic |
| GAAGCTGAGCGAGGGAAGTA+CGG | 0.525268 | 1.4:-16991507 | None:intergenic |
| ATAGAGAATAGCAATGATGC+AGG | 0.528520 | 1.4:-16994755 | None:intergenic |
| TTGTACATGTTGTGTTGGTG+TGG | 0.532528 | 1.4:+16991761 | MS.gene98977:CDS |
| ACGTGAACTCGTCTCAGTCC+AGG | 0.532854 | 1.4:+16991887 | MS.gene98977:CDS |
| TAGTGGTGGAGCTGGATCAA+TGG | 0.540698 | 1.4:+16994953 | MS.gene98977:CDS |
| TATGCACTGGTGGTTTCTCT+GGG | 0.540734 | 1.4:-16994978 | None:intergenic |
| ATTATCAAACAATGAGGAGA+AGG | 0.540935 | 1.4:+16994929 | MS.gene98977:CDS |
| CCTACGATCCAAACGCGGAT+CGG | 0.541806 | 1.4:-16991721 | None:intergenic |
| GACATGTCGAGCGCTACGAC+TGG | 0.542175 | 1.4:-16991628 | None:intergenic |
| AGTATCACCGCCGTAATCGG+AGG | 0.542558 | 1.4:+16991788 | MS.gene98977:CDS |
| TGCCTCTGTCCATATGAAGA+TGG | 0.543393 | 1.4:+16995746 | MS.gene98977:CDS |
| AGAATATTGTACTTACAAAG+AGG | 0.557808 | 1.4:-16995851 | None:intergenic |
| TTCTGTTGCCAAGTATGCAC+TGG | 0.560999 | 1.4:-16994991 | None:intergenic |
| TGTAAGTACAATATTCTCAA+GGG | 0.561290 | 1.4:+16995857 | MS.gene98977:CDS |
| GAGCGGAGAAGCGGTGTTTG+TGG | 0.565856 | 1.4:-16991454 | None:intergenic |
| TGTTGCCAAGTATGCACTGG+TGG | 0.572455 | 1.4:-16994988 | None:intergenic |
| GGATTCGCGGCGGAGGCAGA+GGG | 0.574584 | 1.4:+16991810 | MS.gene98977:CDS |
| CGCTCACATCATGAAGGCAA+CGG | 0.578089 | 1.4:+16991472 | MS.gene98977:CDS |
| TGCATGAAGAATGGAAATGA+TGG | 0.580086 | 1.4:-16995796 | None:intergenic |
| CGCGTCCGAGAAGCTGAGCG+AGG | 0.580325 | 1.4:-16991516 | None:intergenic |
| GGACGCGCCACCGGACGAAG+AGG | 0.583915 | 1.4:+16991532 | MS.gene98977:CDS |
| TCGTAGCGCTCGACATGTCG+TGG | 0.586584 | 1.4:+16991632 | MS.gene98977:CDS |
| TGGCTTCGAGTATCCCCAAT+CGG | 0.586699 | 1.4:-16991608 | None:intergenic |
| CTTCTCCGCTCACATCATGA+AGG | 0.590176 | 1.4:+16991466 | MS.gene98977:CDS |
| GAAGAGCGTCGTGCCGATTG+GGG | 0.591052 | 1.4:+16991595 | MS.gene98977:CDS |
| GATGTGAATCAATAAATACT+GGG | 0.592207 | 1.4:+16993775 | MS.gene98977:CDS |
| GGATGGTCCTCTTCGTCCGG+TGG | 0.596489 | 1.4:-16991539 | None:intergenic |
| GAATGGAAATGATGGTTGCA+GGG | 0.597135 | 1.4:-16995788 | None:intergenic |
| GTATCACCGCCGTAATCGGA+GGG | 0.597390 | 1.4:+16991789 | MS.gene98977:CDS |
| AGCGTGGAGCATCTTGCAGA+AGG | 0.597658 | 1.4:-16993854 | None:intergenic |
| GATGCTGAATTCAGTTCCGA+TGG | 0.602584 | 1.4:+16991838 | MS.gene98977:CDS |
| GCGTCCGAGAAGCTGAGCGA+GGG | 0.602931 | 1.4:-16991515 | None:intergenic |
| GTCATCACTATCGTTACCAT+CGG | 0.608431 | 1.4:-16991854 | None:intergenic |
| TCATGATGTGAGCGGAGAAG+CGG | 0.615465 | 1.4:-16991463 | None:intergenic |
| GGCGTTCGTTGTGGTGTCGG+CGG | 0.616079 | 1.4:+16991660 | MS.gene98977:CDS |
| CATGTTCGGATGCTCGTCAA+CGG | 0.617231 | 1.4:-16991698 | None:intergenic |
| ATTTCAATTATCAAACAATG+AGG | 0.621561 | 1.4:+16994923 | MS.gene98977:CDS |
| GTGGAACATGGCGTTCGTTG+TGG | 0.631302 | 1.4:+16991651 | MS.gene98977:CDS |
| AAAAGCCCACCATCCACCAA+AGG | 0.634811 | 1.4:-16993806 | None:intergenic |
| GTTTCGCGTACAAGGACGGA+TGG | 0.639083 | 1.4:-16991556 | None:intergenic |
| CGTCCTTGTACGCGAAACGG+CGG | 0.650355 | 1.4:+16991561 | MS.gene98977:CDS |
| AAAGCTTACCAGTACAAGCG+TGG | 0.653306 | 1.4:-16993870 | None:intergenic |
| CTCCATCTTCATATGGACAG+AGG | 0.658470 | 1.4:-16995748 | None:intergenic |
| CGTTGCCTTCATGATGTGAG+CGG | 0.668534 | 1.4:-16991471 | None:intergenic |
| TAGAGAATAGCAATGATGCA+GGG | 0.670826 | 1.4:-16994754 | None:intergenic |
| AATGAGGAGAAGGATAGTGG+TGG | 0.671940 | 1.4:+16994939 | MS.gene98977:CDS |
| GCGAATCCCTCCGATTACGG+CGG | 0.690339 | 1.4:-16991795 | None:intergenic |
| TCACATCATGAAGGCAACGG+CGG | 0.699092 | 1.4:+16991475 | MS.gene98977:CDS |
| ATGTGAATCAATAAATACTG+GGG | 0.711272 | 1.4:+16993776 | MS.gene98977:CDS |
| CGTAACCTACGATCCAAACG+CGG | 0.712893 | 1.4:-16991726 | None:intergenic |
| GCTGAGCGAGGGAAGTACGG+CGG | 0.728736 | 1.4:-16991504 | None:intergenic |
| AACGATAGTGATGACAGCGA+TGG | 0.739420 | 1.4:+16991862 | MS.gene98977:CDS |
| GTAATCGGAGGGATTCGCGG+CGG | 0.757493 | 1.4:+16991800 | MS.gene98977:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATATAACATATAACAT+AGG | + | chr1.4:16992260-16992279 | MS.gene98977:intron | 10.0% |
| !! | ATATACATAATTCAATTAAA+AGG | - | chr1.4:16994202-16994221 | None:intergenic | 10.0% |
| !!! | AAAATTTAACTTCTTATAAT+AGG | - | chr1.4:16995355-16995374 | None:intergenic | 10.0% |
| !!! | AAATTTAACTTCTTATAATA+GGG | - | chr1.4:16995354-16995373 | None:intergenic | 10.0% |
| !! | AAATAAATAGAACAATTAGA+AGG | - | chr1.4:16994841-16994860 | None:intergenic | 15.0% |
| !! | AGATATATAATATGATCTTA+TGG | - | chr1.4:16992202-16992221 | None:intergenic | 15.0% |
| !! | TAATGCAAATTAATATCATA+AGG | - | chr1.4:16992028-16992047 | None:intergenic | 15.0% |
| !! | TGTTAATGAAACTAAAAAAT+AGG | - | chr1.4:16993512-16993531 | None:intergenic | 15.0% |
| !!! | ACCAGTTTTATTAAAATATT+AGG | - | chr1.4:16993149-16993168 | None:intergenic | 15.0% |
| !!! | ATGTATATATTTGTTGATTT+GGG | + | chr1.4:16994042-16994061 | MS.gene98977:intron | 15.0% |
| !!! | TAATATTTTAATAAAACTGG+TGG | + | chr1.4:16993148-16993167 | MS.gene98977:intron | 15.0% |
| !!! | TATAAGAAGTTAAATTTTGA+AGG | + | chr1.4:16995357-16995376 | MS.gene98977:intron | 15.0% |
| !!! | TATGTATATATTTGTTGATT+TGG | + | chr1.4:16994041-16994060 | MS.gene98977:intron | 15.0% |
| !!! | TCCTAATATTTTAATAAAAC+TGG | + | chr1.4:16993145-16993164 | MS.gene98977:intron | 15.0% |
| !! | AGTTTCTTCTAAATATTTCT+TGG | + | chr1.4:16995590-16995609 | MS.gene98977:intron | 20.0% |
| !! | ATAAAAAATTTCTTGATCGA+AGG | + | chr1.4:16994357-16994376 | MS.gene98977:intron | 20.0% |
| !! | ATGCATGTTAAAAGAAAAAA+GGG | + | chr1.4:16995510-16995529 | MS.gene98977:intron | 20.0% |
| !! | ATTCTTCATGCATAATAAAA+TGG | + | chr1.4:16995807-16995826 | MS.gene98977:CDS | 20.0% |
| !! | ATTTCAATTATCAAACAATG+AGG | + | chr1.4:16994923-16994942 | MS.gene98977:CDS | 20.0% |
| !! | GGTATGAATAAAAAATAGTT+TGG | + | chr1.4:16994792-16994811 | MS.gene98977:intron | 20.0% |
| !! | GTGTAATGTAAATATAAGTT+TGG | + | chr1.4:16992897-16992916 | MS.gene98977:intron | 20.0% |
| !! | TATTTATAGATGACCAAAAT+GGG | + | chr1.4:16994535-16994554 | MS.gene98977:intron | 20.0% |
| !! | TCAAAAACAAACTAATCAAA+AGG | - | chr1.4:16994098-16994117 | None:intergenic | 20.0% |
| !! | TTAGTTTATTCCTAGAAATA+AGG | - | chr1.4:16993386-16993405 | None:intergenic | 20.0% |
| !! | TTATAATAGGGATACAAAAA+GGG | - | chr1.4:16995342-16995361 | None:intergenic | 20.0% |
| !!! | AATTTGAGTTAAACAAACAA+CGG | + | chr1.4:16995301-16995320 | MS.gene98977:intron | 20.0% |
| !!! | ATCTGTTTTTTAATCTTTAC+AGG | + | chr1.4:16994638-16994657 | MS.gene98977:intron | 20.0% |
| !!! | ATTTCATTTTGAGTGAATAT+AGG | + | chr1.4:16994857-16994876 | MS.gene98977:intron | 20.0% |
| !!! | ATTTTATTATGCATGAAGAA+TGG | - | chr1.4:16995808-16995827 | None:intergenic | 20.0% |
| !!! | CATTAATTGAAACTTCTTTT+TGG | + | chr1.4:16995437-16995456 | MS.gene98977:intron | 20.0% |
| !!! | GATAATTGAAATCTGTATTT+TGG | - | chr1.4:16994915-16994934 | None:intergenic | 20.0% |
| !!! | TAACATTGATTTATCATATC+AGG | - | chr1.4:16993111-16993130 | None:intergenic | 20.0% |
| !!! | TATCCTCTTTTATAAACAAA+GGG | - | chr1.4:16994150-16994169 | None:intergenic | 20.0% |
| !!! | TGCAAATTTCTAAAATATCA+AGG | - | chr1.4:16995261-16995280 | None:intergenic | 20.0% |
| !!! | TGTATATATTTGTTGATTTG+GGG | + | chr1.4:16994043-16994062 | MS.gene98977:intron | 20.0% |
| !!! | TTTGTTTTTAAGAGCATTTT+TGG | + | chr1.4:16992756-16992775 | MS.gene98977:intron | 20.0% |
| ! | AAAATCGAATATAATTCACC+TGG | - | chr1.4:16991908-16991927 | None:intergenic | 25.0% |
| ! | AAAGAAAAGTGAACAAAAGT+GGG | + | chr1.4:16992542-16992561 | MS.gene98977:intron | 25.0% |
| ! | AATGCGATATCTCAAATAAA+TGG | + | chr1.4:16994490-16994509 | MS.gene98977:intron | 25.0% |
| ! | AATGGAAATCAATTGTTGAA+TGG | + | chr1.4:16995101-16995120 | MS.gene98977:intron | 25.0% |
| ! | ACATTTAATAATGTGAGGAA+TGG | - | chr1.4:16993567-16993586 | None:intergenic | 25.0% |
| ! | ACTGAAATAAATTGTGTTTC+AGG | - | chr1.4:16995050-16995069 | None:intergenic | 25.0% |
| ! | ACTTGAAATACAGGTATATA+AGG | - | chr1.4:16994235-16994254 | None:intergenic | 25.0% |
| ! | AGAATATTGTACTTACAAAG+AGG | - | chr1.4:16995854-16995873 | None:intergenic | 25.0% |
| ! | AGATGTGAATCAATAAATAC+TGG | + | chr1.4:16993774-16993793 | MS.gene98977:CDS | 25.0% |
| ! | ATATGTATAGATATGTGGTT+TGG | + | chr1.4:16993664-16993683 | MS.gene98977:intron | 25.0% |
| ! | ATATTTGTAGACACTTATTC+TGG | + | chr1.4:16993727-16993746 | MS.gene98977:intron | 25.0% |
| ! | ATGTGAATCAATAAATACTG+GGG | + | chr1.4:16993776-16993795 | MS.gene98977:CDS | 25.0% |
| ! | CTTATAATAGGGATACAAAA+AGG | - | chr1.4:16995343-16995362 | None:intergenic | 25.0% |
| ! | GATGCATGTTAAAAGAAAAA+AGG | + | chr1.4:16995509-16995528 | MS.gene98977:intron | 25.0% |
| ! | GATGTGAATCAATAAATACT+GGG | + | chr1.4:16993775-16993794 | MS.gene98977:CDS | 25.0% |
| ! | GTATTTATAGATGACCAAAA+TGG | + | chr1.4:16994534-16994553 | MS.gene98977:intron | 25.0% |
| ! | GTCTATTAAGATTATGTTGA+TGG | + | chr1.4:16995558-16995577 | MS.gene98977:intron | 25.0% |
| ! | TAAATATAAGTTTGGCATTG+AGG | + | chr1.4:16992905-16992924 | MS.gene98977:intron | 25.0% |
| ! | TACAAATGGATGAACAAAAT+TGG | - | chr1.4:16994383-16994402 | None:intergenic | 25.0% |
| ! | TCACATTATTAAATGTCCTT+GGG | + | chr1.4:16993571-16993590 | MS.gene98977:intron | 25.0% |
| ! | TCGGTTCTTGATATAAAAAA+TGG | - | chr1.4:16992952-16992971 | None:intergenic | 25.0% |
| ! | TGTAAGTACAATATTCTCAA+GGG | + | chr1.4:16995857-16995876 | MS.gene98977:CDS | 25.0% |
| ! | TTAAAAACAAACATTCCAGA+GGG | - | chr1.4:16992747-16992766 | None:intergenic | 25.0% |
| ! | TTCTAAATATTTCTTGGAAG+AGG | + | chr1.4:16995596-16995615 | MS.gene98977:intron | 25.0% |
| ! | TTGTAAGTACAATATTCTCA+AGG | + | chr1.4:16995856-16995875 | MS.gene98977:CDS | 25.0% |
| ! | TTTATTGAAAAAATTGTCCC+TGG | - | chr1.4:16994342-16994361 | None:intergenic | 25.0% |
| ! | TTTGTTGCTATACTAATGAA+AGG | + | chr1.4:16994611-16994630 | MS.gene98977:intron | 25.0% |
| !! | AAACTCTGAAAATTGTAAGT+TGG | - | chr1.4:16995681-16995700 | None:intergenic | 25.0% |
| !! | AATTGATCACTTCTGAAAAA+TGG | + | chr1.4:16995083-16995102 | MS.gene98977:intron | 25.0% |
| !! | ATACCCTTTGTTTATAAAAG+AGG | + | chr1.4:16994144-16994163 | MS.gene98977:intron | 25.0% |
| !! | ATTTATTTGAGATATCGCAT+TGG | - | chr1.4:16994491-16994510 | None:intergenic | 25.0% |
| !! | GTATCCTCTTTTATAAACAA+AGG | - | chr1.4:16994151-16994170 | None:intergenic | 25.0% |
| !! | GTTTTTGAATAATAGAGAGA+CGG | + | chr1.4:16994110-16994129 | MS.gene98977:intron | 25.0% |
| !! | TTCTTTTAGTACTAAAGGAT+GGG | + | chr1.4:16995475-16995494 | MS.gene98977:intron | 25.0% |
| !! | TTGCAAAATTAACATTTTGC+TGG | + | chr1.4:16993074-16993093 | MS.gene98977:intron | 25.0% |
| !!! | AAAATTGTAAGTTGGTTTCT+GGG | - | chr1.4:16995673-16995692 | None:intergenic | 25.0% |
| !!! | AAGAGCATTTTTGGATTTTT+GGG | + | chr1.4:16992765-16992784 | MS.gene98977:intron | 25.0% |
| !!! | ATTTATTGATTCACATCTCT+TGG | - | chr1.4:16993772-16993791 | None:intergenic | 25.0% |
| !!! | CAATTTTTTTTTGCATGCTA+GGG | + | chr1.4:16991960-16991979 | MS.gene98977:intron | 25.0% |
| !!! | CTCAACTTTGTTCTTTTTTA+AGG | - | chr1.4:16994446-16994465 | None:intergenic | 25.0% |
| !!! | GTATATATTTGTTGATTTGG+GGG | + | chr1.4:16994044-16994063 | MS.gene98977:intron | 25.0% |
| !!! | GTTTTTTAATCTTTACAGGT+TGG | + | chr1.4:16994642-16994661 | MS.gene98977:intron | 25.0% |
| !!! | TAAGAGCATTTTTGGATTTT+TGG | + | chr1.4:16992764-16992783 | MS.gene98977:intron | 25.0% |
| !!! | TCAATTTTTTTTTGCATGCT+AGG | + | chr1.4:16991959-16991978 | MS.gene98977:intron | 25.0% |
| !!! | TTATAAACAAAGGGTATTGA+AGG | - | chr1.4:16994141-16994160 | None:intergenic | 25.0% |
| AAAAACTTGAGAAGAGAAAG+TGG | + | chr1.4:16992323-16992342 | MS.gene98977:intron | 30.0% | |
| AAAACTTGAGAAGAGAAAGT+GGG | + | chr1.4:16992324-16992343 | MS.gene98977:intron | 30.0% | |
| AAATTACTTGATACAGTGCA+AGG | - | chr1.4:16993707-16993726 | None:intergenic | 30.0% | |
| AATTGTTGAATGGAAATCAG+TGG | + | chr1.4:16995111-16995130 | MS.gene98977:intron | 30.0% | |
| ACAAATTTGGAAAACTCTCT+TGG | - | chr1.4:16994305-16994324 | None:intergenic | 30.0% | |
| ACAAGGAATAACAATGAGAA+AGG | - | chr1.4:16993281-16993300 | None:intergenic | 30.0% | |
| AGTGACTAAAACAGAAAATC+AGG | - | chr1.4:16995139-16995158 | None:intergenic | 30.0% | |
| ATTATCAAACAATGAGGAGA+AGG | + | chr1.4:16994929-16994948 | MS.gene98977:CDS | 30.0% | |
| CAAGGACATTTAATAATGTG+AGG | - | chr1.4:16993572-16993591 | None:intergenic | 30.0% | |
| CTAGCAAATAAACTGATAGT+AGG | + | chr1.4:16995534-16995553 | MS.gene98977:intron | 30.0% | |
| CTCACATTATTAAATGTCCT+TGG | + | chr1.4:16993570-16993589 | MS.gene98977:intron | 30.0% | |
| CTTAAAAACAAACATTCCAG+AGG | - | chr1.4:16992748-16992767 | None:intergenic | 30.0% | |
| GAAAGAAAAGTGAACAAAAG+TGG | + | chr1.4:16992541-16992560 | MS.gene98977:intron | 30.0% | |
| GTGACTAAAACAGAAAATCA+GGG | - | chr1.4:16995138-16995157 | None:intergenic | 30.0% | |
| GTTTCACTTACTTGAAATAC+AGG | - | chr1.4:16994244-16994263 | None:intergenic | 30.0% | |
| TAAAAACAAACATTCCAGAG+GGG | - | chr1.4:16992746-16992765 | None:intergenic | 30.0% | |
| TATGTCGTGTAAAAGTTTCA+TGG | - | chr1.4:16993225-16993244 | None:intergenic | 30.0% | |
| TATTAAATGTCCTTGGGAAA+AGG | + | chr1.4:16993577-16993596 | MS.gene98977:intron | 30.0% | |
| TATTCCTTGTGTATGTATAG+AGG | + | chr1.4:16993291-16993310 | MS.gene98977:intron | 30.0% | |
| TCTCAAATTATTAGCTGTGT+CGG | - | chr1.4:16992400-16992419 | None:intergenic | 30.0% | |
| TGAAACATATTACGTAGCTA+TGG | - | chr1.4:16992874-16992893 | None:intergenic | 30.0% | |
| TGATGCATGTTAATCTACTT+TGG | + | chr1.4:16993639-16993658 | MS.gene98977:intron | 30.0% | |
| TGGCTATATGTATAGATATG+TGG | + | chr1.4:16993659-16993678 | MS.gene98977:intron | 30.0% | |
| TTCAGTGTAATTACAAGTGT+TGG | + | chr1.4:16992431-16992450 | MS.gene98977:intron | 30.0% | |
| TTCATTAACATTCCAGTGTA+TGG | + | chr1.4:16993522-16993541 | MS.gene98977:intron | 30.0% | |
| ! | CAAGTTTTTCTTTCACTATC+CGG | - | chr1.4:16992312-16992331 | None:intergenic | 30.0% |
| ! | CTTCTTTTAGTACTAAAGGA+TGG | + | chr1.4:16995474-16995493 | MS.gene98977:intron | 30.0% |
| ! | GTCACTTCTTTTAGTACTAA+AGG | + | chr1.4:16995470-16995489 | MS.gene98977:intron | 30.0% |
| ! | TGATTTGTGTCCTTATTTCT+AGG | + | chr1.4:16993373-16993392 | MS.gene98977:intron | 30.0% |
| !! | CATTTTGAGTGAATATAGGA+AGG | + | chr1.4:16994861-16994880 | MS.gene98977:intron | 30.0% |
| !! | GAAAATTGTAAGTTGGTTTC+TGG | - | chr1.4:16995674-16995693 | None:intergenic | 30.0% |
| !! | GTAAGAAGTGTCACAAATAA+TGG | + | chr1.4:16993248-16993267 | MS.gene98977:intron | 30.0% |
| !!! | ACTTTTGAAGTCGACAAATT+TGG | - | chr1.4:16994318-16994337 | None:intergenic | 30.0% |
| !!! | GTTCTTTTTTAAGGACTGAT+AGG | - | chr1.4:16994437-16994456 | None:intergenic | 30.0% |
| !!! | TATTTGCTGTTTTGCATTTC+AGG | + | chr1.4:16995712-16995731 | MS.gene98977:intron | 30.0% |
| !!! | TATTTTTTCTAGAAGAGCTC+AGG | - | chr1.4:16995642-16995661 | None:intergenic | 30.0% |
| AAAAACAAACATTCCAGAGG+GGG | - | chr1.4:16992745-16992764 | None:intergenic | 35.0% | |
| ACAGAGCTTCTCAATGATAT+GGG | - | chr1.4:16993185-16993204 | None:intergenic | 35.0% | |
| ACATCGAGGTTACAACTTTA+TGG | + | chr1.4:16995381-16995400 | MS.gene98977:intron | 35.0% | |
| AGGAACTTTGTTGAAGATGT+AGG | + | chr1.4:16995616-16995635 | MS.gene98977:intron | 35.0% | |
| AGTCCATTAATTGCTAGTGA+AGG | + | chr1.4:16994464-16994483 | MS.gene98977:intron | 35.0% | |
| ATAGAGAATAGCAATGATGC+AGG | - | chr1.4:16994758-16994777 | None:intergenic | 35.0% | |
| ATCTGACTTTGCAGTGAATT+TGG | + | chr1.4:16992218-16992237 | MS.gene98977:intron | 35.0% | |
| CAATCTATCTCGTCAAAACT+TGG | - | chr1.4:16992170-16992189 | None:intergenic | 35.0% | |
| GTAACCTCTATACATACACA+AGG | - | chr1.4:16993298-16993317 | None:intergenic | 35.0% | |
| GTATACTCACACTCATACAT+AGG | + | chr1.4:16993959-16993978 | MS.gene98977:intron | 35.0% | |
| GTATAGCAACAAACTTTGCA+TGG | - | chr1.4:16994604-16994623 | None:intergenic | 35.0% | |
| GTGTATGTATAGAGGTTACA+AGG | + | chr1.4:16993299-16993318 | MS.gene98977:intron | 35.0% | |
| TAGAGAATAGCAATGATGCA+GGG | - | chr1.4:16994757-16994776 | None:intergenic | 35.0% | |
| TCATCCATTTGTAAACGCAT+CGG | + | chr1.4:16994390-16994409 | MS.gene98977:intron | 35.0% | |
| TCATTATTGCGTAAGAAAGC+CGG | + | chr1.4:16992290-16992309 | MS.gene98977:intron | 35.0% | |
| TCTGACTTTGCAGTGAATTT+GGG | + | chr1.4:16992219-16992238 | MS.gene98977:intron | 35.0% | |
| TGCATGAAGAATGGAAATGA+TGG | - | chr1.4:16995799-16995818 | None:intergenic | 35.0% | |
| TGGTCATCTATAAATACCCT+CGG | - | chr1.4:16994531-16994550 | None:intergenic | 35.0% | |
| TTATAGATGACCAAAATGGG+CGG | + | chr1.4:16994538-16994557 | MS.gene98977:intron | 35.0% | |
| TTCTTATTCACAAGTAGCAG+CGG | + | chr1.4:16993433-16993452 | MS.gene98977:intron | 35.0% | |
| TTGAGTTAAACAAACAACGG+CGG | + | chr1.4:16995304-16995323 | MS.gene98977:intron | 35.0% | |
| ! | AATACTTTTACCTGAGGATG+CGG | + | chr1.4:16995016-16995035 | MS.gene98977:CDS | 35.0% |
| ! | ACGTGCTTTGAATGCTATTA+CGG | + | chr1.4:16992813-16992832 | MS.gene98977:intron | 35.0% |
| ! | AGAACGAATACTTTTACCTG+AGG | + | chr1.4:16995010-16995029 | MS.gene98977:CDS | 35.0% |
| ! | AGACACACACAAGCATTTTT+AGG | - | chr1.4:16994016-16994035 | None:intergenic | 35.0% |
| ! | ATTTGTAAACGCATCGGTAT+GGG | + | chr1.4:16994396-16994415 | MS.gene98977:intron | 35.0% |
| ! | CATTCTATTTCCTTTTCCCA+AGG | - | chr1.4:16993590-16993609 | None:intergenic | 35.0% |
| ! | GTGTTTTGTACATGTTGTGT+TGG | + | chr1.4:16991756-16991775 | MS.gene98977:CDS | 35.0% |
| ! | TTAATTTTGCAACTGCTGCT+AGG | - | chr1.4:16993066-16993085 | None:intergenic | 35.0% |
| ! | TTTTAGTACTAAAGGATGGG+AGG | + | chr1.4:16995478-16995497 | MS.gene98977:intron | 35.0% |
| !! | AGCTTGTCTTGTTTCTTTGA+GGG | + | chr1.4:16992846-16992865 | MS.gene98977:intron | 35.0% |
| !! | GTAATTACAAGTGTTGGTGT+CGG | + | chr1.4:16992437-16992456 | MS.gene98977:intron | 35.0% |
| !! | TAAACAAAGGGTATTGAAGG+AGG | - | chr1.4:16994138-16994157 | None:intergenic | 35.0% |
| !! | TAAATTTTGAAGGCACATCG+AGG | + | chr1.4:16995367-16995386 | MS.gene98977:intron | 35.0% |
| !! | TATATTTGTTGATTTGGGGG+TGG | + | chr1.4:16994047-16994066 | MS.gene98977:intron | 35.0% |
| AACAAAAGTGGGCAGAAGAA+TGG | + | chr1.4:16992553-16992572 | MS.gene98977:intron | 40.0% | |
| AACAATGAGGAGAAGGATAG+TGG | + | chr1.4:16994936-16994955 | MS.gene98977:CDS | 40.0% | |
| AAGAAGCCAAAAGTGGTGAT+TGG | + | chr1.4:16992580-16992599 | MS.gene98977:intron | 40.0% | |
| AGAAAGTGGGCAAAAGAGAT+AGG | + | chr1.4:16992337-16992356 | MS.gene98977:intron | 40.0% | |
| AGAATGGAAATGATGGTTGC+AGG | - | chr1.4:16995792-16995811 | None:intergenic | 40.0% | |
| AGCTCTACTCCATCTTCATA+TGG | - | chr1.4:16995758-16995777 | None:intergenic | 40.0% | |
| ATACTGGGGTTTCATTCCTT+TGG | + | chr1.4:16993790-16993809 | MS.gene98977:CDS | 40.0% | |
| ATTAACATGCATCAGCAGCA+AGG | - | chr1.4:16993633-16993652 | None:intergenic | 40.0% | |
| CAGAGCTTCTCAATGATATG+GGG | - | chr1.4:16993184-16993203 | None:intergenic | 40.0% | |
| CATACCGATGCGTTTACAAA+TGG | - | chr1.4:16994397-16994416 | None:intergenic | 40.0% | |
| CATATTTAGCTACTAGTGGC+TGG | + | chr1.4:16994174-16994193 | MS.gene98977:intron | 40.0% | |
| CCACTAGTAGCTAAATATGC+AGG | - | chr1.4:16994173-16994192 | None:intergenic | 40.0% | |
| CCTGCATATTTAGCTACTAG+TGG | + | chr1.4:16994170-16994189 | MS.gene98977:intron | 40.0% | |
| CGTGTAAAAGTTTCATGGTG+CGG | - | chr1.4:16993220-16993239 | None:intergenic | 40.0% | |
| CTGACTTTGCAGTGAATTTG+GGG | + | chr1.4:16992220-16992239 | MS.gene98977:intron | 40.0% | |
| GAATGGAAATGATGGTTGCA+GGG | - | chr1.4:16995791-16995810 | None:intergenic | 40.0% | |
| GACAGAGCTTCTCAATGATA+TGG | - | chr1.4:16993186-16993205 | None:intergenic | 40.0% | |
| GATTGGAAGACAATTAGTGC+TGG | + | chr1.4:16992597-16992616 | MS.gene98977:intron | 40.0% | |
| GCTATTTGTTCCAGTGCTTA+AGG | + | chr1.4:16993988-16994007 | MS.gene98977:intron | 40.0% | |
| GGTCCTTCACTAGCAATTAA+TGG | - | chr1.4:16994470-16994489 | None:intergenic | 40.0% | |
| GTCATCACTATCGTTACCAT+CGG | - | chr1.4:16991857-16991876 | None:intergenic | 40.0% | |
| GTTCTCATGTTACTGTCAGT+CGG | - | chr1.4:16994819-16994838 | None:intergenic | 40.0% | |
| TATTCTCAAGGGAAACGAAC+AGG | + | chr1.4:16995868-16995887 | MS.gene98977:CDS | 40.0% | |
| TGAGTTAAACAAACAACGGC+GGG | + | chr1.4:16995305-16995324 | MS.gene98977:intron | 40.0% | |
| TGATTTCATGCACGTGAATC+TGG | + | chr1.4:16995180-16995199 | MS.gene98977:intron | 40.0% | |
| TGCCAAAACAACACAGAAGA+TGG | - | chr1.4:16994701-16994720 | None:intergenic | 40.0% | |
| TGCTATTCTCTATGCTGTTG+CGG | + | chr1.4:16994765-16994784 | MS.gene98977:CDS | 40.0% | |
| TTGAATGCTATTACGGCTAG+TGG | + | chr1.4:16992820-16992839 | MS.gene98977:intron | 40.0% | |
| ! | AATAGAGTAACCGCCCATTT+TGG | - | chr1.4:16994551-16994570 | None:intergenic | 40.0% |
| ! | ATTCTAGGGGTTTCAACTGA+AGG | - | chr1.4:16992721-16992740 | None:intergenic | 40.0% |
| ! | CATTTGTAAACGCATCGGTA+TGG | + | chr1.4:16994395-16994414 | MS.gene98977:intron | 40.0% |
| ! | TGTCTTCCAATCACCACTTT+TGG | - | chr1.4:16992589-16992608 | None:intergenic | 40.0% |
| ! | TTGTACATGTTGTGTTGGTG+TGG | + | chr1.4:16991761-16991780 | MS.gene98977:CDS | 40.0% |
| !! | CAGGTTGGCTGTTATCTTTT+TGG | + | chr1.4:16994657-16994676 | MS.gene98977:intron | 40.0% |
| !! | CTTGGTTCTATTGTAGTACG+TGG | - | chr1.4:16994287-16994306 | None:intergenic | 40.0% |
| !! | CTTGTCTTGTTTCTTTGAGG+GGG | + | chr1.4:16992848-16992867 | MS.gene98977:intron | 40.0% |
| !! | GAGCTTGTCTTGTTTCTTTG+AGG | + | chr1.4:16992845-16992864 | MS.gene98977:intron | 40.0% |
| !! | GCTTGTCTTGTTTCTTTGAG+GGG | + | chr1.4:16992847-16992866 | MS.gene98977:intron | 40.0% |
| !! | TGTCGACTTCAAAAGTACCA+GGG | + | chr1.4:16994322-16994341 | MS.gene98977:intron | 40.0% |
| !! | TTGTCGACTTCAAAAGTACC+AGG | + | chr1.4:16994321-16994340 | MS.gene98977:intron | 40.0% |
| !! | TTTTTAGGCACCTTAAGCAC+TGG | - | chr1.4:16994001-16994020 | None:intergenic | 40.0% |
| !!! | GGTTTTGGTATCGATTTCGA+TGG | - | chr1.4:16993045-16993064 | None:intergenic | 40.0% |
| !!! | GTTGTTTTGGCATGCTTGAT+TGG | + | chr1.4:16994709-16994728 | MS.gene98977:CDS | 40.0% |
| !!! | TGCCATCTTCTGTGTTGTTT+TGG | + | chr1.4:16994696-16994715 | MS.gene98977:CDS | 40.0% |
| AAAAGTGGGCAGAAGAATGG+AGG | + | chr1.4:16992556-16992575 | MS.gene98977:intron | 45.0% | |
| AAAGCTTACCAGTACAAGCG+TGG | - | chr1.4:16993873-16993892 | None:intergenic | 45.0% | |
| AACGATAGTGATGACAGCGA+TGG | + | chr1.4:16991862-16991881 | MS.gene98977:CDS | 45.0% | |
| AATGCTATTACGGCTAGTGG+TGG | + | chr1.4:16992823-16992842 | MS.gene98977:intron | 45.0% | |
| ACTGAAGGATGTTCGCTGTT+AGG | - | chr1.4:16992706-16992725 | None:intergenic | 45.0% | |
| AGAAACCACCAGTGCATACT+TGG | + | chr1.4:16994983-16995002 | MS.gene98977:CDS | 45.0% | |
| AGCATTCAAAGCACGTGACA+AGG | - | chr1.4:16992809-16992828 | None:intergenic | 45.0% | |
| AGTGGACAGATTCCATACAC+TGG | - | chr1.4:16993537-16993556 | None:intergenic | 45.0% | |
| ATTCAAAGCACGTGACAAGG+GGG | - | chr1.4:16992806-16992825 | None:intergenic | 45.0% | |
| CACGTGAATCTGGTCATCAA+AGG | + | chr1.4:16995190-16995209 | MS.gene98977:intron | 45.0% | |
| CATTCAAAGCACGTGACAAG+GGG | - | chr1.4:16992807-16992826 | None:intergenic | 45.0% | |
| CTCCATCTTCATATGGACAG+AGG | - | chr1.4:16995751-16995770 | None:intergenic | 45.0% | |
| CTGATAGGTTTGTCACTCCA+AGG | - | chr1.4:16994422-16994441 | None:intergenic | 45.0% | |
| GATGCTGAATTCAGTTCCGA+TGG | + | chr1.4:16991838-16991857 | MS.gene98977:CDS | 45.0% | |
| GCAGCAAGGTCGTTTAAAAG+AGG | - | chr1.4:16993619-16993638 | None:intergenic | 45.0% | |
| GCATTCAAAGCACGTGACAA+GGG | - | chr1.4:16992808-16992827 | None:intergenic | 45.0% | |
| GCTATTCTCTATGCTGTTGC+GGG | + | chr1.4:16994766-16994785 | MS.gene98977:CDS | 45.0% | |
| GGTTTCATTCCTTTGGTGGA+TGG | + | chr1.4:16993797-16993816 | MS.gene98977:CDS | 45.0% | |
| GTGAGGAATGGCAATATCAG+TGG | - | chr1.4:16993555-16993574 | None:intergenic | 45.0% | |
| TGCCTCTGTCCATATGAAGA+TGG | + | chr1.4:16995746-16995765 | MS.gene98977:CDS | 45.0% | |
| TGGAGGAAAGAAGCCAAAAG+TGG | + | chr1.4:16992573-16992592 | MS.gene98977:intron | 45.0% | |
| TGTCTTCAGTGTGTCGAACT+CGG | - | chr1.4:16992971-16992990 | None:intergenic | 45.0% | |
| TTCTGTTGCCAAGTATGCAC+TGG | - | chr1.4:16994994-16995013 | None:intergenic | 45.0% | |
| TTGAGTATCACCGCCGTAAT+CGG | + | chr1.4:16991785-16991804 | MS.gene98977:CDS | 45.0% | |
| ! | AATGAGGAGAAGGATAGTGG+TGG | + | chr1.4:16994939-16994958 | MS.gene98977:CDS | 45.0% |
| ! | GAGAGCATATGTGATACCGA+GGG | + | chr1.4:16994512-16994531 | MS.gene98977:intron | 45.0% |
| ! | TATGCACTGGTGGTTTCTCT+GGG | - | chr1.4:16994981-16995000 | None:intergenic | 45.0% |
| ! | TCATTCCTTTGGTGGATGGT+GGG | + | chr1.4:16993801-16993820 | MS.gene98977:CDS | 45.0% |
| ! | TTCATTCCTTTGGTGGATGG+TGG | + | chr1.4:16993800-16993819 | MS.gene98977:CDS | 45.0% |
| ! | TTGCAACTGCTGCTAGGTTT+TGG | - | chr1.4:16993060-16993079 | None:intergenic | 45.0% |
| !! | ATAAACTAATAAATATAATA+AGG | + | chr1.4:16993397-16993416 | MS.gene98977:intron | 5.0% |
| !! | ATTTGTATTAATAATTTAAT+GGG | + | chr1.4:16991988-16992007 | MS.gene98977:intron | 5.0% |
| !! | TATTTGTATTAATAATTTAA+TGG | + | chr1.4:16991987-16992006 | MS.gene98977:intron | 5.0% |
| AAAAGCCCACCATCCACCAA+AGG | - | chr1.4:16993809-16993828 | None:intergenic | 50.0% | |
| AAGATGCTCCACGCTTGTAC+TGG | + | chr1.4:16993862-16993881 | MS.gene98977:CDS | 50.0% | |
| ATCCGTCCTTGTACGCGAAA+CGG | + | chr1.4:16991558-16991577 | MS.gene98977:CDS | 50.0% | |
| CATGTTCGGATGCTCGTCAA+CGG | - | chr1.4:16991701-16991720 | None:intergenic | 50.0% | |
| CGCTCACATCATGAAGGCAA+CGG | + | chr1.4:16991472-16991491 | MS.gene98977:CDS | 50.0% | |
| CGTAACCTACGATCCAAACG+CGG | - | chr1.4:16991729-16991748 | None:intergenic | 50.0% | |
| CGTTGCCTTCATGATGTGAG+CGG | - | chr1.4:16991474-16991493 | None:intergenic | 50.0% | |
| CTGCGTGTGACTACTGTGTA+TGG | + | chr1.4:16992672-16992691 | MS.gene98977:intron | 50.0% | |
| CTGGGGTTTCATTCCTTTGG+TGG | + | chr1.4:16993793-16993812 | MS.gene98977:CDS | 50.0% | |
| CTTCTCCGCTCACATCATGA+AGG | + | chr1.4:16991466-16991485 | MS.gene98977:CDS | 50.0% | |
| GATGGTTGCAGGGAAGAGTA+TGG | - | chr1.4:16995781-16995800 | None:intergenic | 50.0% | |
| GGAAATCATACCGCATCCTC+AGG | - | chr1.4:16995029-16995048 | None:intergenic | 50.0% | |
| GGACTATTCGCGACTATCAC+TGG | + | chr1.4:16993479-16993498 | MS.gene98977:intron | 50.0% | |
| GTTACGCGCAGCTACATCAT+GGG | + | chr1.4:16993457-16993476 | MS.gene98977:intron | 50.0% | |
| TCACATCATGAAGGCAACGG+CGG | + | chr1.4:16991475-16991494 | MS.gene98977:CDS | 50.0% | |
| TCATGATGTGAGCGGAGAAG+CGG | - | chr1.4:16991466-16991485 | None:intergenic | 50.0% | |
| TGGCTTCGAGTATCCCCAAT+CGG | - | chr1.4:16991611-16991630 | None:intergenic | 50.0% | |
| TGTTACGCGCAGCTACATCA+TGG | + | chr1.4:16993456-16993475 | MS.gene98977:intron | 50.0% | |
| TGTTGCCAAGTATGCACTGG+TGG | - | chr1.4:16994991-16995010 | None:intergenic | 50.0% | |
| TTACGCGCAGCTACATCATG+GGG | + | chr1.4:16993458-16993477 | MS.gene98977:intron | 50.0% | |
| ! | CGGAGGCTGGTTCACTAATA+TGG | + | chr1.4:16992646-16992665 | MS.gene98977:intron | 50.0% |
| ! | GGAGAGCATATGTGATACCG+AGG | + | chr1.4:16994511-16994530 | MS.gene98977:intron | 50.0% |
| ! | GGCTTTTACTGGGTTGTCTC+TGG | + | chr1.4:16993822-16993841 | MS.gene98977:CDS | 50.0% |
| ! | GTATGCACTGGTGGTTTCTC+TGG | - | chr1.4:16994982-16995001 | None:intergenic | 50.0% |
| ! | TAGTGGTGGAGCTGGATCAA+TGG | + | chr1.4:16994953-16994972 | MS.gene98977:CDS | 50.0% |
| !! | ATTCCAGAGGGGGCATTCTA+GGG | - | chr1.4:16992735-16992754 | None:intergenic | 50.0% |
| !!! | GTGGATGGTGGGCTTTTACT+GGG | + | chr1.4:16993812-16993831 | MS.gene98977:CDS | 50.0% |
| ACGTGAACTCGTCTCAGTCC+AGG | + | chr1.4:16991887-16991906 | MS.gene98977:CDS | 55.0% | |
| ACTTCCCTCGCTCAGCTTCT+CGG | + | chr1.4:16991511-16991530 | MS.gene98977:CDS | 55.0% | |
| AGTATCACCGCCGTAATCGG+AGG | + | chr1.4:16991788-16991807 | MS.gene98977:CDS | 55.0% | |
| CAAACGCGGATCGGCATGTT+CGG | - | chr1.4:16991715-16991734 | None:intergenic | 55.0% | |
| CATGGCGTTCGTTGTGGTGT+CGG | + | chr1.4:16991657-16991676 | MS.gene98977:CDS | 55.0% | |
| CCTACGATCCAAACGCGGAT+CGG | - | chr1.4:16991724-16991743 | None:intergenic | 55.0% | |
| CTACCGACACTCCTCGGATT+AGG | - | chr1.4:16992492-16992511 | None:intergenic | 55.0% | |
| GAAAAGTCGCTCAGCGAGCT+TGG | + | chr1.4:16992622-16992641 | MS.gene98977:intron | 55.0% | |
| GAAGCTGAGCGAGGGAAGTA+CGG | - | chr1.4:16991510-16991529 | None:intergenic | 55.0% | |
| GCTCGACATGTCGTGGAACA+TGG | + | chr1.4:16991639-16991658 | MS.gene98977:CDS | 55.0% | |
| GTATCACCGCCGTAATCGGA+GGG | + | chr1.4:16991789-16991808 | MS.gene98977:CDS | 55.0% | |
| GTCGGTAGAGGGAGACTAGA+GGG | + | chr1.4:16992504-16992523 | MS.gene98977:intron | 55.0% | |
| GTGGAACATGGCGTTCGTTG+TGG | + | chr1.4:16991651-16991670 | MS.gene98977:CDS | 55.0% | |
| GTTTCGCGTACAAGGACGGA+TGG | - | chr1.4:16991559-16991578 | None:intergenic | 55.0% | |
| TCGGTAGAGGGAGACTAGAG+GGG | + | chr1.4:16992505-16992524 | MS.gene98977:intron | 55.0% | |
| TCTCTATGCTGTTGCGGGAC+AGG | + | chr1.4:16994771-16994790 | MS.gene98977:CDS | 55.0% | |
| TGTCGGTAGAGGGAGACTAG+AGG | + | chr1.4:16992503-16992522 | MS.gene98977:intron | 55.0% | |
| ! | AAACGCATCGGTATGGGCCT+TGG | + | chr1.4:16994402-16994421 | MS.gene98977:intron | 55.0% |
| ! | ACGCCTAATCCGAGGAGTGT+CGG | + | chr1.4:16992486-16992505 | MS.gene98977:intron | 55.0% |
| ! | AGCGTGGAGCATCTTGCAGA+AGG | - | chr1.4:16993857-16993876 | None:intergenic | 55.0% |
| ! | GAGAAGGATAGTGGTGGAGC+TGG | + | chr1.4:16994945-16994964 | MS.gene98977:CDS | 55.0% |
| !! | AATCCGAGGAGTGTCGGTAG+AGG | + | chr1.4:16992492-16992511 | MS.gene98977:intron | 55.0% |
| !! | ATCCGAGGAGTGTCGGTAGA+GGG | + | chr1.4:16992493-16992512 | MS.gene98977:intron | 55.0% |
| !! | CATTCCAGAGGGGGCATTCT+AGG | - | chr1.4:16992736-16992755 | None:intergenic | 55.0% |
| !! | TTCCAGAGGGGGCATTCTAG+GGG | - | chr1.4:16992734-16992753 | None:intergenic | 55.0% |
| !!! | GGTGGATGGTGGGCTTTTAC+TGG | + | chr1.4:16993811-16993830 | MS.gene98977:CDS | 55.0% |
| AACCCCTAGAATGCCCCCTC+TGG | + | chr1.4:16992729-16992748 | MS.gene98977:intron | 60.0% | |
| AGTCGCTCAGCGAGCTTGGT+CGG | + | chr1.4:16992626-16992645 | MS.gene98977:intron | 60.0% | |
| CATCATGAAGGCAACGGCGG+TGG | + | chr1.4:16991478-16991497 | MS.gene98977:CDS | 60.0% | |
| CCGATCCGCGTTTGGATCGT+AGG | + | chr1.4:16991721-16991740 | MS.gene98977:CDS | 60.0% | |
| CGAACATGCCGATCCGCGTT+TGG | + | chr1.4:16991713-16991732 | MS.gene98977:CDS | 60.0% | |
| CGCCGTTTCGCGTACAAGGA+CGG | - | chr1.4:16991563-16991582 | None:intergenic | 60.0% | |
| CGGTAGAGGGAGACTAGAGG+GGG | + | chr1.4:16992506-16992525 | MS.gene98977:intron | 60.0% | |
| CGTCCTTGTACGCGAAACGG+CGG | + | chr1.4:16991561-16991580 | MS.gene98977:CDS | 60.0% | |
| CTCCCTCTACCGACACTCCT+CGG | - | chr1.4:16992498-16992517 | None:intergenic | 60.0% | |
| GACATGTCGAGCGCTACGAC+TGG | - | chr1.4:16991631-16991650 | None:intergenic | 60.0% | |
| GACGGATGGTCCTCTTCGTC+CGG | - | chr1.4:16991545-16991564 | None:intergenic | 60.0% | |
| GAGCGGAGAAGCGGTGTTTG+TGG | - | chr1.4:16991457-16991476 | None:intergenic | 60.0% | |
| GATTAGGCGTGTCCCGGTGT+CGG | - | chr1.4:16992476-16992495 | None:intergenic | 60.0% | |
| GCCGCGAATCCCTCCGATTA+CGG | - | chr1.4:16991801-16991820 | None:intergenic | 60.0% | |
| GCCGTAATCGGAGGGATTCG+CGG | + | chr1.4:16991797-16991816 | MS.gene98977:CDS | 60.0% | |
| GCGAATCCCTCCGATTACGG+CGG | - | chr1.4:16991798-16991817 | None:intergenic | 60.0% | |
| GTAATCGGAGGGATTCGCGG+CGG | + | chr1.4:16991800-16991819 | MS.gene98977:CDS | 60.0% | |
| TCGTAGCGCTCGACATGTCG+TGG | + | chr1.4:16991632-16991651 | MS.gene98977:CDS | 60.0% | |
| ! | TCCTCGGATTAGGCGTGTCC+CGG | - | chr1.4:16992482-16992501 | None:intergenic | 60.0% |
| !! | CGAAGAGCGTCGTGCCGATT+GGG | + | chr1.4:16991594-16991613 | MS.gene98977:CDS | 60.0% |
| !! | GAAGAGCGTCGTGCCGATTG+GGG | + | chr1.4:16991595-16991614 | MS.gene98977:CDS | 60.0% |
| !! | TCGAAGAGCGTCGTGCCGAT+TGG | + | chr1.4:16991593-16991612 | MS.gene98977:CDS | 60.0% |
| ACACGACGCGTGTCCGACAC+CGG | + | chr1.4:16992460-16992479 | MS.gene98977:intron | 65.0% | |
| ACCGGGACACGCCTAATCCG+AGG | + | chr1.4:16992478-16992497 | MS.gene98977:intron | 65.0% | |
| GCGTCCGAGAAGCTGAGCGA+GGG | - | chr1.4:16991518-16991537 | None:intergenic | 65.0% | |
| GGATGGTCCTCTTCGTCCGG+TGG | - | chr1.4:16991542-16991561 | None:intergenic | 65.0% | |
| ! | GCTGAGCGAGGGAAGTACGG+CGG | - | chr1.4:16991507-16991526 | None:intergenic | 65.0% |
| ! | GGCGTTCGTTGTGGTGTCGG+CGG | + | chr1.4:16991660-16991679 | MS.gene98977:CDS | 65.0% |
| ATCGGAGGGATTCGCGGCGG+AGG | + | chr1.4:16991803-16991822 | MS.gene98977:CDS | 70.0% | |
| CACGACGCGTGTCCGACACC+GGG | + | chr1.4:16992461-16992480 | MS.gene98977:intron | 70.0% | |
| CAGCGAGCTTGGTCGGAGGC+TGG | + | chr1.4:16992633-16992652 | MS.gene98977:intron | 70.0% | |
| CAGCTTCTCGGACGCGCCAC+CGG | + | chr1.4:16991523-16991542 | MS.gene98977:CDS | 70.0% | |
| CGCGTCCGAGAAGCTGAGCG+AGG | - | chr1.4:16991519-16991538 | None:intergenic | 70.0% | |
| CGCTCAGCGAGCTTGGTCGG+AGG | + | chr1.4:16992629-16992648 | MS.gene98977:intron | 70.0% | |
| GCGCCGCCGTTTCGCGTACA+AGG | - | chr1.4:16991567-16991586 | None:intergenic | 70.0% | |
| GGATTCGCGGCGGAGGCAGA+GGG | + | chr1.4:16991810-16991829 | MS.gene98977:CDS | 70.0% | |
| GGACGCGCCACCGGACGAAG+AGG | + | chr1.4:16991532-16991551 | MS.gene98977:CDS | 75.0% | |
| GGGATTCGCGGCGGAGGCAG+AGG | + | chr1.4:16991809-16991828 | MS.gene98977:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 16991427 | 16995895 | 16991427 | ID=MS.gene98977 |
| chr1.4 | mRNA | 16991427 | 16995895 | 16991427 | ID=MS.gene98977.t1;Parent=MS.gene98977 |
| chr1.4 | exon | 16991427 | 16991908 | 16991427 | ID=MS.gene98977.t1.exon1;Parent=MS.gene98977.t1 |
| chr1.4 | CDS | 16991427 | 16991908 | 16991427 | ID=cds.MS.gene98977.t1;Parent=MS.gene98977.t1 |
| chr1.4 | exon | 16993764 | 16993883 | 16993764 | ID=MS.gene98977.t1.exon2;Parent=MS.gene98977.t1 |
| chr1.4 | CDS | 16993764 | 16993883 | 16993764 | ID=cds.MS.gene98977.t1;Parent=MS.gene98977.t1 |
| chr1.4 | exon | 16994660 | 16994792 | 16994660 | ID=MS.gene98977.t1.exon3;Parent=MS.gene98977.t1 |
| chr1.4 | CDS | 16994660 | 16994792 | 16994660 | ID=cds.MS.gene98977.t1;Parent=MS.gene98977.t1 |
| chr1.4 | exon | 16994879 | 16995037 | 16994879 | ID=MS.gene98977.t1.exon4;Parent=MS.gene98977.t1 |
| chr1.4 | CDS | 16994879 | 16995037 | 16994879 | ID=cds.MS.gene98977.t1;Parent=MS.gene98977.t1 |
| chr1.4 | exon | 16995734 | 16995895 | 16995734 | ID=MS.gene98977.t1.exon5;Parent=MS.gene98977.t1 |
| chr1.4 | CDS | 16995734 | 16995895 | 16995734 | ID=cds.MS.gene98977.t1;Parent=MS.gene98977.t1 |
| Gene Sequence |
| Protein sequence |
