Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99096.t1 | XP_004490745.1 | 75.7 | 259 | 56 | 3 | 1 | 258 | 1 | 253 | 1.00E-98 | 369.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99096.t1 | Q8LD98 | 46.8 | 265 | 121 | 3 | 1 | 258 | 1 | 252 | 2.3e-54 | 213.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99096.t1 | A0A1S2XMW5 | 75.7 | 259 | 56 | 3 | 1 | 258 | 1 | 253 | 7.6e-99 | 369.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051959 | MS.gene99096 | 0.817257 | 3.62E-52 | -1.69E-46 |
| MS.gene051960 | MS.gene99096 | 0.816572 | 5.16E-52 | -1.69E-46 |
| MS.gene052053 | MS.gene99096 | 0.844487 | 7.33E-59 | -1.69E-46 |
| MS.gene055549 | MS.gene99096 | 0.822365 | 2.46E-53 | -1.69E-46 |
| MS.gene055550 | MS.gene99096 | 0.817352 | 3.45E-52 | -1.69E-46 |
| MS.gene055551 | MS.gene99096 | 0.806235 | 9.08E-50 | -1.69E-46 |
| MS.gene056365 | MS.gene99096 | 0.808643 | 2.80E-50 | -1.69E-46 |
| MS.gene056530 | MS.gene99096 | 0.805623 | 1.22E-49 | -1.69E-46 |
| MS.gene058628 | MS.gene99096 | 0.832373 | 9.81E-56 | -1.69E-46 |
| MS.gene058629 | MS.gene99096 | 0.811409 | 7.10E-51 | -1.69E-46 |
| MS.gene058630 | MS.gene99096 | 0.813806 | 2.12E-51 | -1.69E-46 |
| MS.gene06023 | MS.gene99096 | 0.815245 | 1.02E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99096.t1 | MTR_5g076170 | 94.677 | 263 | 9 | 1 | 1 | 258 | 1 | 263 | 0.0 | 498 |
| MS.gene99096.t1 | MTR_3g063310 | 62.791 | 258 | 89 | 3 | 1 | 258 | 2 | 252 | 5.47e-100 | 292 |
| MS.gene99096.t1 | MTR_1g077560 | 48.462 | 260 | 122 | 7 | 1 | 258 | 1 | 250 | 1.22e-68 | 212 |
| MS.gene99096.t1 | MTR_5g087760 | 38.424 | 203 | 118 | 3 | 59 | 258 | 56 | 254 | 9.31e-43 | 146 |
| MS.gene99096.t1 | MTR_3g078800 | 37.566 | 189 | 109 | 4 | 74 | 258 | 69 | 252 | 1.69e-34 | 125 |
| MS.gene99096.t1 | MTR_2g012550 | 35.751 | 193 | 119 | 3 | 69 | 258 | 74 | 264 | 3.74e-32 | 119 |
| MS.gene99096.t1 | MTR_2g011350 | 32.099 | 162 | 103 | 3 | 86 | 244 | 35 | 192 | 2.13e-21 | 89.4 |
| MS.gene99096.t1 | MTR_3g078820 | 32.450 | 151 | 95 | 3 | 93 | 240 | 44 | 190 | 3.05e-20 | 86.3 |
| MS.gene99096.t1 | MTR_3g074150 | 26.840 | 231 | 146 | 8 | 19 | 243 | 19 | 232 | 4.70e-19 | 84.0 |
| MS.gene99096.t1 | MTR_7g106000 | 31.771 | 192 | 117 | 6 | 54 | 236 | 20 | 206 | 5.88e-19 | 83.2 |
| MS.gene99096.t1 | MTR_2g100060 | 33.939 | 165 | 105 | 3 | 70 | 232 | 60 | 222 | 3.24e-18 | 82.0 |
| MS.gene99096.t1 | MTR_1g057400 | 29.947 | 187 | 122 | 5 | 57 | 236 | 3 | 187 | 3.76e-18 | 80.5 |
| MS.gene99096.t1 | MTR_3g078810 | 37.008 | 127 | 77 | 3 | 121 | 245 | 9 | 134 | 8.68e-18 | 78.2 |
| MS.gene99096.t1 | MTR_2g090225 | 30.435 | 161 | 109 | 3 | 99 | 258 | 62 | 220 | 9.87e-18 | 79.7 |
| MS.gene99096.t1 | MTR_3g104460 | 27.363 | 201 | 133 | 5 | 67 | 258 | 57 | 253 | 1.77e-17 | 79.7 |
| MS.gene99096.t1 | MTR_7g105970 | 27.461 | 193 | 133 | 4 | 65 | 252 | 32 | 222 | 5.81e-17 | 77.8 |
| MS.gene99096.t1 | MTR_6g071410 | 31.847 | 157 | 95 | 4 | 68 | 217 | 2 | 153 | 1.35e-16 | 76.6 |
| MS.gene99096.t1 | MTR_6g070890 | 31.847 | 157 | 95 | 4 | 68 | 217 | 2 | 153 | 1.35e-16 | 76.6 |
| MS.gene99096.t1 | MTR_6g070900 | 34.395 | 157 | 91 | 7 | 68 | 217 | 2 | 153 | 2.15e-16 | 75.9 |
| MS.gene99096.t1 | MTR_6g071400 | 34.395 | 157 | 91 | 7 | 68 | 217 | 2 | 153 | 2.15e-16 | 75.9 |
| MS.gene99096.t1 | MTR_1g057270 | 27.746 | 173 | 115 | 5 | 92 | 257 | 74 | 243 | 7.22e-16 | 75.1 |
| MS.gene99096.t1 | MTR_4g119428 | 32.979 | 188 | 114 | 7 | 65 | 244 | 41 | 224 | 1.34e-15 | 74.3 |
| MS.gene99096.t1 | MTR_2g086790 | 25.641 | 195 | 132 | 2 | 75 | 256 | 19 | 213 | 1.47e-15 | 73.9 |
| MS.gene99096.t1 | MTR_7g106050 | 29.379 | 177 | 124 | 1 | 76 | 252 | 22 | 197 | 4.46e-15 | 72.4 |
| MS.gene99096.t1 | MTR_7g106120 | 33.871 | 124 | 75 | 3 | 61 | 178 | 4 | 126 | 9.74e-15 | 71.2 |
| MS.gene99096.t1 | MTR_7g106010 | 30.233 | 215 | 128 | 9 | 57 | 256 | 20 | 227 | 1.75e-14 | 70.9 |
| MS.gene99096.t1 | MTR_6g471090 | 31.788 | 151 | 92 | 5 | 68 | 217 | 11 | 151 | 4.83e-14 | 69.3 |
| MS.gene99096.t1 | MTR_7g106030 | 29.064 | 203 | 133 | 7 | 50 | 244 | 16 | 215 | 6.87e-14 | 69.3 |
| MS.gene99096.t1 | MTR_8g016370 | 28.571 | 196 | 110 | 5 | 42 | 232 | 25 | 195 | 1.06e-13 | 68.9 |
| MS.gene99096.t1 | MTR_4g051880 | 30.769 | 169 | 106 | 4 | 98 | 256 | 44 | 211 | 1.28e-13 | 68.6 |
| MS.gene99096.t1 | MTR_2g087000 | 25.568 | 176 | 127 | 4 | 70 | 244 | 45 | 217 | 2.46e-11 | 62.4 |
| MS.gene99096.t1 | MTR_8g090320 | 25.888 | 197 | 123 | 6 | 64 | 255 | 79 | 257 | 3.23e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99096.t1 | AT1G65690 | 52.075 | 265 | 107 | 3 | 1 | 258 | 1 | 252 | 1.12e-90 | 268 |
| MS.gene99096.t1 | AT5G36970 | 52.107 | 261 | 109 | 5 | 1 | 258 | 1 | 248 | 1.64e-87 | 260 |
| MS.gene99096.t1 | AT1G54540 | 44.961 | 258 | 123 | 3 | 1 | 258 | 1 | 239 | 4.68e-63 | 197 |
| MS.gene99096.t1 | AT2G27080 | 37.500 | 192 | 116 | 3 | 62 | 252 | 65 | 253 | 1.48e-39 | 138 |
| MS.gene99096.t1 | AT2G27080 | 37.500 | 192 | 116 | 3 | 62 | 252 | 65 | 253 | 1.48e-39 | 138 |
| MS.gene99096.t1 | AT5G21130 | 28.649 | 185 | 132 | 0 | 62 | 246 | 86 | 270 | 1.74e-26 | 104 |
| MS.gene99096.t1 | AT3G11650 | 32.967 | 182 | 118 | 3 | 65 | 244 | 45 | 224 | 6.49e-25 | 99.4 |
| MS.gene99096.t1 | AT5G06320 | 35.542 | 166 | 100 | 5 | 75 | 236 | 48 | 210 | 3.04e-24 | 97.4 |
| MS.gene99096.t1 | AT2G35980 | 35.260 | 173 | 103 | 5 | 65 | 232 | 31 | 199 | 2.02e-22 | 92.4 |
| MS.gene99096.t1 | AT2G35460 | 31.325 | 166 | 107 | 4 | 75 | 236 | 54 | 216 | 5.90e-21 | 89.0 |
| MS.gene99096.t1 | AT3G52470 | 29.050 | 179 | 124 | 3 | 77 | 254 | 22 | 198 | 8.77e-17 | 77.0 |
| MS.gene99096.t1 | AT5G22870 | 27.778 | 180 | 127 | 2 | 73 | 252 | 27 | 203 | 9.15e-17 | 77.0 |
| MS.gene99096.t1 | AT3G11660 | 26.087 | 184 | 134 | 1 | 75 | 256 | 18 | 201 | 6.43e-16 | 74.7 |
| MS.gene99096.t1 | AT4G09590 | 29.787 | 188 | 120 | 4 | 73 | 254 | 20 | 201 | 8.50e-16 | 74.3 |
| MS.gene99096.t1 | AT2G35970 | 29.787 | 188 | 120 | 4 | 73 | 254 | 20 | 201 | 5.42e-15 | 72.0 |
| MS.gene99096.t1 | AT2G35960 | 28.488 | 172 | 111 | 4 | 89 | 254 | 35 | 200 | 2.08e-14 | 70.5 |
| MS.gene99096.t1 | AT2G22180 | 27.094 | 203 | 123 | 5 | 60 | 257 | 108 | 290 | 3.43e-14 | 71.2 |
| MS.gene99096.t1 | AT1G17620 | 25.521 | 192 | 119 | 4 | 59 | 232 | 43 | 228 | 3.86e-13 | 67.8 |
| MS.gene99096.t1 | AT3G44220 | 29.032 | 155 | 104 | 1 | 84 | 232 | 23 | 177 | 6.56e-13 | 66.2 |
| MS.gene99096.t1 | AT5G53730 | 27.389 | 157 | 106 | 3 | 85 | 236 | 37 | 190 | 2.90e-12 | 64.7 |
| MS.gene99096.t1 | AT5G06330 | 28.082 | 146 | 103 | 1 | 94 | 237 | 39 | 184 | 5.37e-12 | 63.9 |
| MS.gene99096.t1 | AT4G05220 | 24.762 | 210 | 129 | 8 | 48 | 236 | 5 | 206 | 4.58e-11 | 61.6 |
Find 44 sgRNAs with CRISPR-Local
Find 53 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTAACCCTGAAATTAATTT+TGG | 0.050421 | 5.2:-64126859 | None:intergenic |
| AGTTCATCGACCGAGTATTT+TGG | 0.182422 | 5.2:-64126492 | None:intergenic |
| CTAATAATTCTATTAGAATT+AGG | 0.234955 | 5.2:+64126910 | MS.gene99096:CDS |
| GGAGCAGTAGTTGTAAATTT+AGG | 0.237234 | 5.2:+64126931 | MS.gene99096:CDS |
| TTGTGACCTTGATAGAATTT+AGG | 0.240879 | 5.2:-64126678 | None:intergenic |
| AGAAATCCAAACAAGAAAAT+TGG | 0.264628 | 5.2:+64126585 | MS.gene99096:CDS |
| AGCTTCCCAAAATTAATTTC+AGG | 0.315887 | 5.2:+64126853 | MS.gene99096:CDS |
| GGAGGACCATGTTGTTGTTC+AGG | 0.329559 | 5.2:-64126291 | None:intergenic |
| CCAAAATTAATTTCAGGGTT+AGG | 0.341912 | 5.2:+64126859 | MS.gene99096:CDS |
| TTTGATTGATTAATAGGAAT+AGG | 0.373477 | 5.2:-64126342 | None:intergenic |
| GGCAAAGTTTGTTGTGTACT+AGG | 0.373858 | 5.2:-64126321 | None:intergenic |
| GACATGTTTCTTGGTACTAA+AGG | 0.406371 | 5.2:-64126255 | None:intergenic |
| TGTTTCACCTTCAATTTAAG+AGG | 0.407730 | 5.2:-64126801 | None:intergenic |
| GTAGTTGTAAATTTAGGTTT+AGG | 0.411847 | 5.2:+64126937 | MS.gene99096:CDS |
| GTTGCTGCAAATTCTTCTGT+TGG | 0.423745 | 5.2:+64126388 | MS.gene99096:CDS |
| ATAGCACTTGGCATAACAAT+TGG | 0.433295 | 5.2:+64126438 | MS.gene99096:CDS |
| GTTCTTAGTATACCTTTGAC+AGG | 0.440681 | 5.2:+64126711 | MS.gene99096:CDS |
| GTTTGTTGTGTACTAGGAAA+AGG | 0.446325 | 5.2:-64126315 | None:intergenic |
| GCTTCCCAAAATTAATTTCA+GGG | 0.450968 | 5.2:+64126854 | MS.gene99096:CDS |
| TCTTTCAAACAACAACAGTT+TGG | 0.462291 | 5.2:+64126533 | MS.gene99096:CDS |
| TAGTGTTCCTCTTAAATTGA+AGG | 0.472711 | 5.2:+64126794 | MS.gene99096:CDS |
| GGACAAACACAGAATGCAAC+AGG | 0.474658 | 5.2:+64126732 | MS.gene99096:CDS |
| TTCCCAAGCTTAATCCTCAC+AGG | 0.495620 | 5.2:-64126825 | None:intergenic |
| CAGGGTTAGGTGTACGATTG+TGG | 0.496478 | 5.2:+64126872 | MS.gene99096:CDS |
| AAAATTGGAATTGACTATAG+AGG | 0.508164 | 5.2:+64126600 | MS.gene99096:CDS |
| TTCTGTGTTTGTCCTGTCAA+AGG | 0.510330 | 5.2:-64126723 | None:intergenic |
| CTTGGTACTAAAGGTGCTGA+AGG | 0.518344 | 5.2:-64126246 | None:intergenic |
| AACCTGTGAGGATTAAGCTT+GGG | 0.519369 | 5.2:+64126823 | MS.gene99096:CDS |
| TGTTGTGTACTAGGAAAAGG+AGG | 0.521253 | 5.2:-64126312 | None:intergenic |
| TCATTACCTAAATTCTATCA+AGG | 0.551476 | 5.2:+64126672 | MS.gene99096:CDS |
| CAACCTGTGAGGATTAAGCT+TGG | 0.558142 | 5.2:+64126822 | MS.gene99096:CDS |
| GTGGAAGTCACATAAGTGCT+TGG | 0.572955 | 5.2:+64126622 | MS.gene99096:CDS |
| CAGACACAAAATTATGTGAA+GGG | 0.588380 | 5.2:+64126649 | MS.gene99096:CDS |
| ACCAAAGATTCCAAAATACT+CGG | 0.589951 | 5.2:+64126482 | MS.gene99096:CDS |
| ATTGGAATTGACTATAGAGG+TGG | 0.594568 | 5.2:+64126603 | MS.gene99096:CDS |
| ACAGACACAAAATTATGTGA+AGG | 0.595482 | 5.2:+64126648 | MS.gene99096:CDS |
| GGTGCTGAAGGTTGTTGTTG+AGG | 0.603656 | 5.2:-64126234 | None:intergenic |
| CAGCAACAAGTTCAATCAGA+GGG | 0.624043 | 5.2:+64126771 | MS.gene99096:CDS |
| GCAGCAACAAGTTCAATCAG+AGG | 0.642123 | 5.2:+64126770 | MS.gene99096:CDS |
| GGTTAGGTGTACGATTGTGG+TGG | 0.648867 | 5.2:+64126875 | MS.gene99096:CDS |
| GGTGCTTCAACATCATGAAG+TGG | 0.676498 | 5.2:-64126213 | None:intergenic |
| TGTGTACTAGGAAAAGGAGG+AGG | 0.681120 | 5.2:-64126309 | None:intergenic |
| TGAAGGTGAAACAACCTGTG+AGG | 0.706368 | 5.2:+64126811 | MS.gene99096:CDS |
| GATGATCCTGAACAACAACA+TGG | 0.735600 | 5.2:+64126285 | MS.gene99096:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTAATAATTCTATTAGAATT+AGG | + | chr5.2:64126910-64126929 | MS.gene99096:CDS | 15.0% |
| !! | TTTGATTGATTAATAGGAAT+AGG | - | chr5.2:64126345-64126364 | None:intergenic | 20.0% |
| ! | AAAATTGGAATTGACTATAG+AGG | + | chr5.2:64126600-64126619 | MS.gene99096:CDS | 25.0% |
| ! | AGAAATCCAAACAAGAAAAT+TGG | + | chr5.2:64126585-64126604 | MS.gene99096:CDS | 25.0% |
| ! | TCATTACCTAAATTCTATCA+AGG | + | chr5.2:64126672-64126691 | MS.gene99096:CDS | 25.0% |
| !! | CTAACCCTGAAATTAATTTT+GGG | - | chr5.2:64126861-64126880 | None:intergenic | 25.0% |
| !! | GTAGTTGTAAATTTAGGTTT+AGG | + | chr5.2:64126937-64126956 | MS.gene99096:CDS | 25.0% |
| !! | TCAATTCCAATTTTCTTGTT+TGG | - | chr5.2:64126594-64126613 | None:intergenic | 25.0% |
| !!! | ATATTTTTGATCATAGCACT+TGG | + | chr5.2:64126426-64126445 | MS.gene99096:CDS | 25.0% |
| ACAGACACAAAATTATGTGA+AGG | + | chr5.2:64126648-64126667 | MS.gene99096:CDS | 30.0% | |
| ACCAAAGATTCCAAAATACT+CGG | + | chr5.2:64126482-64126501 | MS.gene99096:CDS | 30.0% | |
| AGCTTCCCAAAATTAATTTC+AGG | + | chr5.2:64126853-64126872 | MS.gene99096:CDS | 30.0% | |
| CAGACACAAAATTATGTGAA+GGG | + | chr5.2:64126649-64126668 | MS.gene99096:CDS | 30.0% | |
| CCAAAATTAATTTCAGGGTT+AGG | + | chr5.2:64126859-64126878 | MS.gene99096:CDS | 30.0% | |
| GAATCTTTGGTCTAAAAACA+AGG | - | chr5.2:64126473-64126492 | None:intergenic | 30.0% | |
| GCTTCCCAAAATTAATTTCA+GGG | + | chr5.2:64126854-64126873 | MS.gene99096:CDS | 30.0% | |
| TAGTGTTCCTCTTAAATTGA+AGG | + | chr5.2:64126794-64126813 | MS.gene99096:CDS | 30.0% | |
| TCTTTCAAACAACAACAGTT+TGG | + | chr5.2:64126533-64126552 | MS.gene99096:CDS | 30.0% | |
| TGTTTCACCTTCAATTTAAG+AGG | - | chr5.2:64126804-64126823 | None:intergenic | 30.0% | |
| TTGTGACCTTGATAGAATTT+AGG | - | chr5.2:64126681-64126700 | None:intergenic | 30.0% | |
| ! | CCTAACCCTGAAATTAATTT+TGG | - | chr5.2:64126862-64126881 | None:intergenic | 30.0% |
| !! | TCAGATTTTGACATGTTTCT+TGG | - | chr5.2:64126267-64126286 | None:intergenic | 30.0% |
| !!! | GGTGGTTTTGATTGATTAAT+AGG | - | chr5.2:64126351-64126370 | None:intergenic | 30.0% |
| ATAGCACTTGGCATAACAAT+TGG | + | chr5.2:64126438-64126457 | MS.gene99096:CDS | 35.0% | |
| ATTGGAATTGACTATAGAGG+TGG | + | chr5.2:64126603-64126622 | MS.gene99096:CDS | 35.0% | |
| GACATGTTTCTTGGTACTAA+AGG | - | chr5.2:64126258-64126277 | None:intergenic | 35.0% | |
| GGAGCAGTAGTTGTAAATTT+AGG | + | chr5.2:64126931-64126950 | MS.gene99096:CDS | 35.0% | |
| GTTCTTAGTATACCTTTGAC+AGG | + | chr5.2:64126711-64126730 | MS.gene99096:CDS | 35.0% | |
| ! | CAACAGCTTCTTCTTTTCTT+TGG | - | chr5.2:64126372-64126391 | None:intergenic | 35.0% |
| !! | GTTTGTTGTGTACTAGGAAA+AGG | - | chr5.2:64126318-64126337 | None:intergenic | 35.0% |
| !!! | ACCGAGTATTTTGGAATCTT+TGG | - | chr5.2:64126486-64126505 | None:intergenic | 35.0% |
| AACCTGTGAGGATTAAGCTT+GGG | + | chr5.2:64126823-64126842 | MS.gene99096:CDS | 40.0% | |
| CAGCAACAAGTTCAATCAGA+GGG | + | chr5.2:64126771-64126790 | MS.gene99096:CDS | 40.0% | |
| GATGATCCTGAACAACAACA+TGG | + | chr5.2:64126285-64126304 | MS.gene99096:CDS | 40.0% | |
| GTTGCTGCAAATTCTTCTGT+TGG | + | chr5.2:64126388-64126407 | MS.gene99096:CDS | 40.0% | |
| TGTTGTGTACTAGGAAAAGG+AGG | - | chr5.2:64126315-64126334 | None:intergenic | 40.0% | |
| TTCTGTGTTTGTCCTGTCAA+AGG | - | chr5.2:64126726-64126745 | None:intergenic | 40.0% | |
| ! | AGTTCATCGACCGAGTATTT+TGG | - | chr5.2:64126495-64126514 | None:intergenic | 40.0% |
| ! | CAGCTTCTTCTTTTCTTTGG+TGG | - | chr5.2:64126369-64126388 | None:intergenic | 40.0% |
| !! | GGCAAAGTTTGTTGTGTACT+AGG | - | chr5.2:64126324-64126343 | None:intergenic | 40.0% |
| CAACCTGTGAGGATTAAGCT+TGG | + | chr5.2:64126822-64126841 | MS.gene99096:CDS | 45.0% | |
| GCAGCAACAAGTTCAATCAG+AGG | + | chr5.2:64126770-64126789 | MS.gene99096:CDS | 45.0% | |
| GGACAAACACAGAATGCAAC+AGG | + | chr5.2:64126732-64126751 | MS.gene99096:CDS | 45.0% | |
| GGTGCTTCAACATCATGAAG+TGG | - | chr5.2:64126216-64126235 | None:intergenic | 45.0% | |
| GTGGAAGTCACATAAGTGCT+TGG | + | chr5.2:64126622-64126641 | MS.gene99096:CDS | 45.0% | |
| TGAAGGTGAAACAACCTGTG+AGG | + | chr5.2:64126811-64126830 | MS.gene99096:CDS | 45.0% | |
| TGTGTACTAGGAAAAGGAGG+AGG | - | chr5.2:64126312-64126331 | None:intergenic | 45.0% | |
| TTCCCAAGCTTAATCCTCAC+AGG | - | chr5.2:64126828-64126847 | None:intergenic | 45.0% | |
| !! | CTTGGTACTAAAGGTGCTGA+AGG | - | chr5.2:64126249-64126268 | None:intergenic | 45.0% |
| CAGGGTTAGGTGTACGATTG+TGG | + | chr5.2:64126872-64126891 | MS.gene99096:CDS | 50.0% | |
| GGTTAGGTGTACGATTGTGG+TGG | + | chr5.2:64126875-64126894 | MS.gene99096:CDS | 50.0% | |
| ! | GGAGGACCATGTTGTTGTTC+AGG | - | chr5.2:64126294-64126313 | None:intergenic | 50.0% |
| ! | GGTGCTGAAGGTTGTTGTTG+AGG | - | chr5.2:64126237-64126256 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 64126189 | 64126965 | 64126189 | ID=MS.gene99096 |
| chr5.2 | mRNA | 64126189 | 64126965 | 64126189 | ID=MS.gene99096.t1;Parent=MS.gene99096 |
| chr5.2 | exon | 64126189 | 64126965 | 64126189 | ID=MS.gene99096.t1.exon1;Parent=MS.gene99096.t1 |
| chr5.2 | CDS | 64126189 | 64126965 | 64126189 | ID=cds.MS.gene99096.t1;Parent=MS.gene99096.t1 |
| Gene Sequence |
| Protein sequence |
