Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06023.t1 | XP_013447130.1 | 92.5 | 147 | 11 | 0 | 1 | 147 | 81 | 227 | 2.20E-69 | 271.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06023.t1 | A0A072TUP3 | 92.5 | 147 | 11 | 0 | 1 | 147 | 81 | 227 | 1.6e-69 | 271.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050961 | MS.gene06023 | 0.828674 | 7.88E-55 | -1.69E-46 |
MS.gene051959 | MS.gene06023 | 0.850024 | 2.22E-60 | -1.69E-46 |
MS.gene051960 | MS.gene06023 | 0.84488 | 5.75E-59 | -1.69E-46 |
MS.gene052053 | MS.gene06023 | 0.840742 | 7.24E-58 | -1.69E-46 |
MS.gene052559 | MS.gene06023 | 0.819024 | 1.44E-52 | -1.69E-46 |
MS.gene053932 | MS.gene06023 | 0.815441 | 9.23E-52 | -1.69E-46 |
MS.gene054892 | MS.gene06023 | 0.843243 | 1.58E-58 | -1.69E-46 |
MS.gene054893 | MS.gene06023 | 0.849431 | 3.25E-60 | -1.69E-46 |
MS.gene055150 | MS.gene06023 | 0.823814 | 1.13E-53 | -1.69E-46 |
MS.gene055549 | MS.gene06023 | 0.81104 | 8.54E-51 | -1.69E-46 |
MS.gene055550 | MS.gene06023 | 0.811029 | 8.59E-51 | -1.69E-46 |
MS.gene055551 | MS.gene06023 | 0.811447 | 6.97E-51 | -1.69E-46 |
MS.gene05624 | MS.gene06023 | 0.809796 | 1.58E-50 | -1.69E-46 |
MS.gene057001 | MS.gene06023 | 0.803731 | 3.03E-49 | -1.69E-46 |
MS.gene057093 | MS.gene06023 | 0.80279 | 4.75E-49 | -1.69E-46 |
MS.gene057622 | MS.gene06023 | 0.807299 | 5.41E-50 | -1.69E-46 |
MS.gene058592 | MS.gene06023 | 0.826716 | 2.33E-54 | -1.69E-46 |
MS.gene05878 | MS.gene06023 | 0.842468 | 2.54E-58 | -1.69E-46 |
MS.gene05952 | MS.gene06023 | 0.835366 | 1.75E-56 | -1.69E-46 |
MS.gene06023 | MS.gene060413 | 0.801618 | 8.27E-49 | -1.69E-46 |
MS.gene06023 | MS.gene060964 | 0.819154 | 1.35E-52 | -1.69E-46 |
MS.gene06023 | MS.gene061729 | 0.808686 | 2.74E-50 | -1.69E-46 |
MS.gene06023 | MS.gene061782 | 0.811706 | 6.12E-51 | -1.69E-46 |
MS.gene06023 | MS.gene062288 | 0.808585 | 2.88E-50 | -1.69E-46 |
MS.gene06023 | MS.gene062327 | 0.824105 | 9.67E-54 | -1.69E-46 |
MS.gene06023 | MS.gene063094 | 0.84629 | 2.38E-59 | -1.69E-46 |
MS.gene06023 | MS.gene063687 | 0.805073 | 1.59E-49 | -1.69E-46 |
MS.gene06023 | MS.gene064415 | 0.816832 | 4.51E-52 | -1.69E-46 |
MS.gene06023 | MS.gene065021 | 0.807338 | 5.31E-50 | -1.69E-46 |
MS.gene06023 | MS.gene065510 | 0.819133 | 1.36E-52 | -1.69E-46 |
MS.gene06023 | MS.gene066012 | 0.809338 | 1.99E-50 | -1.69E-46 |
MS.gene06023 | MS.gene06625 | 0.802161 | 6.40E-49 | -1.69E-46 |
MS.gene06023 | MS.gene066272 | 0.827773 | 1.30E-54 | -1.69E-46 |
MS.gene06023 | MS.gene066724 | 0.80373 | 3.03E-49 | -1.69E-46 |
MS.gene06023 | MS.gene066879 | 0.845415 | 4.12E-59 | -1.69E-46 |
MS.gene06023 | MS.gene067477 | 0.838925 | 2.15E-57 | -1.69E-46 |
MS.gene06023 | MS.gene068282 | 0.801829 | 7.49E-49 | -1.69E-46 |
MS.gene06023 | MS.gene06842 | 0.837462 | 5.12E-57 | -1.69E-46 |
MS.gene06023 | MS.gene068508 | 0.800832 | 1.20E-48 | -1.69E-46 |
MS.gene06023 | MS.gene068941 | 0.828372 | 9.33E-55 | -1.69E-46 |
MS.gene06023 | MS.gene070025 | 0.807713 | 4.42E-50 | -1.69E-46 |
MS.gene06023 | MS.gene070275 | 0.8104 | 1.17E-50 | -1.69E-46 |
MS.gene06023 | MS.gene070320 | 0.808766 | 2.64E-50 | -1.69E-46 |
MS.gene06023 | MS.gene071513 | 0.814555 | 1.45E-51 | -1.69E-46 |
MS.gene06023 | MS.gene071569 | 0.803911 | 2.78E-49 | -1.69E-46 |
MS.gene06023 | MS.gene071949 | 0.86552 | 5.56E-65 | -1.69E-46 |
MS.gene06023 | MS.gene073244 | 0.826365 | 2.82E-54 | -1.69E-46 |
MS.gene06023 | MS.gene073306 | 0.810029 | 1.41E-50 | -1.69E-46 |
MS.gene06023 | MS.gene07347 | 0.803655 | 3.14E-49 | -1.69E-46 |
MS.gene06023 | MS.gene074124 | 0.825052 | 5.79E-54 | -1.69E-46 |
MS.gene06023 | MS.gene07450 | 0.867936 | 9.47E-66 | -1.69E-46 |
MS.gene06023 | MS.gene08120 | 0.859095 | 5.24E-63 | -1.69E-46 |
MS.gene06023 | MS.gene21437 | 0.804333 | 2.27E-49 | -1.69E-46 |
MS.gene06023 | MS.gene21770 | 0.807926 | 3.98E-50 | -1.69E-46 |
MS.gene06023 | MS.gene21853 | 0.817661 | 2.94E-52 | -1.69E-46 |
MS.gene06023 | MS.gene24099 | 0.805271 | 1.45E-49 | -1.69E-46 |
MS.gene06023 | MS.gene24849 | 0.817222 | 3.69E-52 | -1.69E-46 |
MS.gene06023 | MS.gene25530 | 0.803307 | 3.71E-49 | -1.69E-46 |
MS.gene06023 | MS.gene27204 | 0.857937 | 1.16E-62 | -1.69E-46 |
MS.gene06023 | MS.gene29036 | 0.808158 | 3.55E-50 | -1.69E-46 |
MS.gene06023 | MS.gene29096 | 0.802678 | 5.01E-49 | -1.69E-46 |
MS.gene06023 | MS.gene29969 | 0.828841 | 7.18E-55 | -1.69E-46 |
MS.gene06023 | MS.gene30878 | 0.831537 | 1.58E-55 | -1.69E-46 |
MS.gene06023 | MS.gene31091 | 0.825558 | 4.39E-54 | -1.69E-46 |
MS.gene06023 | MS.gene32207 | 0.826646 | 2.42E-54 | -1.69E-46 |
MS.gene06023 | MS.gene32409 | 0.801136 | 1.04E-48 | -1.69E-46 |
MS.gene06023 | MS.gene32929 | 0.844781 | 6.11E-59 | -1.69E-46 |
MS.gene06023 | MS.gene33412 | 0.813629 | 2.32E-51 | -1.69E-46 |
MS.gene06023 | MS.gene33633 | 0.802972 | 4.35E-49 | -1.69E-46 |
MS.gene06023 | MS.gene34754 | 0.804854 | 1.77E-49 | -1.69E-46 |
MS.gene06023 | MS.gene36100 | 0.838172 | 3.37E-57 | -1.69E-46 |
MS.gene06023 | MS.gene36866 | 0.801484 | 8.81E-49 | -1.69E-46 |
MS.gene06023 | MS.gene36867 | 0.80536 | 1.39E-49 | -1.69E-46 |
MS.gene06023 | MS.gene36868 | 0.821844 | 3.25E-53 | -1.69E-46 |
MS.gene06023 | MS.gene36870 | 0.805409 | 1.35E-49 | -1.69E-46 |
MS.gene06023 | MS.gene37412 | 0.813701 | 2.24E-51 | -1.69E-46 |
MS.gene06023 | MS.gene38368 | 0.846158 | 2.59E-59 | -1.69E-46 |
MS.gene06023 | MS.gene39037 | 0.814715 | 1.34E-51 | -1.69E-46 |
MS.gene06023 | MS.gene40619 | 0.806411 | 8.34E-50 | -1.69E-46 |
MS.gene06023 | MS.gene40620 | 0.808391 | 3.17E-50 | -1.69E-46 |
MS.gene06023 | MS.gene41022 | 0.839847 | 1.24E-57 | -1.69E-46 |
MS.gene06023 | MS.gene43381 | 0.84201 | 3.36E-58 | -1.69E-46 |
MS.gene06023 | MS.gene43751 | 0.804976 | 1.67E-49 | -1.69E-46 |
MS.gene06023 | MS.gene44909 | 0.835562 | 1.56E-56 | -1.69E-46 |
MS.gene06023 | MS.gene45115 | 0.810444 | 1.15E-50 | -1.69E-46 |
MS.gene06023 | MS.gene45290 | 0.811821 | 5.78E-51 | -1.69E-46 |
MS.gene06023 | MS.gene45292 | 0.80747 | 4.98E-50 | -1.69E-46 |
MS.gene06023 | MS.gene45552 | 0.841433 | 4.77E-58 | -1.69E-46 |
MS.gene06023 | MS.gene46055 | 0.836557 | 8.73E-57 | -1.69E-46 |
MS.gene06023 | MS.gene46442 | 0.850804 | 1.34E-60 | -1.69E-46 |
MS.gene06023 | MS.gene46918 | 0.808475 | 3.04E-50 | -1.69E-46 |
MS.gene06023 | MS.gene48078 | 0.811269 | 7.62E-51 | -1.69E-46 |
MS.gene06023 | MS.gene49158 | 0.808279 | 3.35E-50 | -1.69E-46 |
MS.gene06023 | MS.gene49627 | 0.810596 | 1.07E-50 | -1.69E-46 |
MS.gene06023 | MS.gene52994 | 0.810809 | 9.58E-51 | -1.69E-46 |
MS.gene06023 | MS.gene54738 | 0.804332 | 2.27E-49 | -1.69E-46 |
MS.gene06023 | MS.gene55755 | 0.994432 | 3.31E-207 | -1.69E-46 |
MS.gene06023 | MS.gene56623 | 0.827817 | 1.27E-54 | -1.69E-46 |
MS.gene06023 | MS.gene57128 | 0.818135 | 2.30E-52 | -1.69E-46 |
MS.gene06023 | MS.gene57517 | 0.816633 | 5.00E-52 | -1.69E-46 |
MS.gene06023 | MS.gene57519 | 0.819664 | 1.03E-52 | -1.69E-46 |
MS.gene06023 | MS.gene57704 | 0.835389 | 1.73E-56 | -1.69E-46 |
MS.gene06023 | MS.gene58527 | 0.806237 | 9.07E-50 | -1.69E-46 |
MS.gene06023 | MS.gene58768 | 0.846551 | 2.02E-59 | -1.69E-46 |
MS.gene06023 | MS.gene58769 | 0.839884 | 1.21E-57 | -1.69E-46 |
MS.gene06023 | MS.gene58793 | 0.8436 | 1.27E-58 | -1.69E-46 |
MS.gene06023 | MS.gene59032 | 0.827063 | 1.92E-54 | -1.69E-46 |
MS.gene06023 | MS.gene59184 | 0.805865 | 1.09E-49 | -1.69E-46 |
MS.gene06023 | MS.gene60615 | 0.804245 | 2.37E-49 | -1.69E-46 |
MS.gene06023 | MS.gene62676 | 0.868862 | 4.76E-66 | -1.69E-46 |
MS.gene06023 | MS.gene62677 | 0.846361 | 2.28E-59 | -1.69E-46 |
MS.gene06023 | MS.gene63577 | 0.800439 | 1.44E-48 | -1.69E-46 |
MS.gene06023 | MS.gene63905 | 0.816485 | 5.40E-52 | -1.69E-46 |
MS.gene06023 | MS.gene65244 | 0.806236 | 9.07E-50 | -1.69E-46 |
MS.gene06023 | MS.gene66673 | 0.803655 | 3.14E-49 | -1.69E-46 |
MS.gene06023 | MS.gene68141 | 0.841683 | 4.10E-58 | -1.69E-46 |
MS.gene06023 | MS.gene69691 | 0.80307 | 4.15E-49 | -1.69E-46 |
MS.gene06023 | MS.gene70154 | 0.826046 | 3.36E-54 | -1.69E-46 |
MS.gene06023 | MS.gene70277 | 0.810357 | 1.20E-50 | -1.69E-46 |
MS.gene06023 | MS.gene70742 | 0.838498 | 2.77E-57 | -1.69E-46 |
MS.gene06023 | MS.gene71511 | 0.815624 | 8.40E-52 | -1.69E-46 |
MS.gene06023 | MS.gene71867 | 0.832291 | 1.03E-55 | -1.69E-46 |
MS.gene06023 | MS.gene72157 | 0.808407 | 3.14E-50 | -1.69E-46 |
MS.gene06023 | MS.gene72178 | 0.805051 | 1.61E-49 | -1.69E-46 |
MS.gene06023 | MS.gene72611 | 0.841541 | 4.46E-58 | -1.69E-46 |
MS.gene06023 | MS.gene72748 | 0.812692 | 3.73E-51 | -1.69E-46 |
MS.gene06023 | MS.gene73236 | 0.844621 | 6.75E-59 | -1.69E-46 |
MS.gene06023 | MS.gene73644 | 0.84916 | 3.87E-60 | -1.69E-46 |
MS.gene06023 | MS.gene73678 | 0.814843 | 1.25E-51 | -1.69E-46 |
MS.gene06023 | MS.gene73859 | 0.812016 | 5.24E-51 | -1.69E-46 |
MS.gene06023 | MS.gene76159 | 0.841962 | 3.46E-58 | -1.69E-46 |
MS.gene06023 | MS.gene76262 | 0.822848 | 1.90E-53 | -1.69E-46 |
MS.gene06023 | MS.gene76423 | 0.834837 | 2.38E-56 | -1.69E-46 |
MS.gene06023 | MS.gene76884 | 0.813012 | 3.17E-51 | -1.69E-46 |
MS.gene06023 | MS.gene77362 | 0.825174 | 5.41E-54 | -1.69E-46 |
MS.gene06023 | MS.gene78383 | 0.830237 | 3.29E-55 | -1.69E-46 |
MS.gene06023 | MS.gene80558 | 0.814192 | 1.75E-51 | -1.69E-46 |
MS.gene06023 | MS.gene80821 | 0.811223 | 7.80E-51 | -1.69E-46 |
MS.gene06023 | MS.gene81359 | 0.821316 | 4.31E-53 | -1.69E-46 |
MS.gene06023 | MS.gene81397 | 0.818553 | 1.85E-52 | -1.69E-46 |
MS.gene06023 | MS.gene81401 | 0.806555 | 7.77E-50 | -1.69E-46 |
MS.gene06023 | MS.gene83022 | 0.830377 | 3.04E-55 | -1.69E-46 |
MS.gene06023 | MS.gene83604 | 0.838587 | 2.63E-57 | -1.69E-46 |
MS.gene06023 | MS.gene83687 | 0.833579 | 4.92E-56 | -1.69E-46 |
MS.gene06023 | MS.gene83853 | 0.815651 | 8.29E-52 | -1.69E-46 |
MS.gene06023 | MS.gene84162 | 0.819679 | 1.02E-52 | -1.69E-46 |
MS.gene06023 | MS.gene86455 | 0.804861 | 1.76E-49 | -1.69E-46 |
MS.gene06023 | MS.gene88803 | 0.814175 | 1.76E-51 | -1.69E-46 |
MS.gene06023 | MS.gene88946 | 0.823052 | 1.70E-53 | -1.69E-46 |
MS.gene06023 | MS.gene89255 | 0.808517 | 2.98E-50 | -1.69E-46 |
MS.gene06023 | MS.gene89256 | 0.844767 | 6.16E-59 | -1.69E-46 |
MS.gene06023 | MS.gene89702 | 0.964911 | 6.31E-124 | -1.69E-46 |
MS.gene06023 | MS.gene90362 | 0.823956 | 1.05E-53 | -1.69E-46 |
MS.gene06023 | MS.gene92076 | 0.85746 | 1.61E-62 | -1.69E-46 |
MS.gene06023 | MS.gene93160 | 0.809094 | 2.24E-50 | -1.69E-46 |
MS.gene06023 | MS.gene93163 | 0.823201 | 1.57E-53 | -1.69E-46 |
MS.gene06023 | MS.gene93972 | 0.844435 | 7.57E-59 | -1.69E-46 |
MS.gene06023 | MS.gene94266 | 0.833281 | 5.84E-56 | -1.69E-46 |
MS.gene06023 | MS.gene95332 | 0.836862 | 7.30E-57 | -1.69E-46 |
MS.gene06023 | MS.gene95833 | 0.815264 | 1.01E-51 | -1.69E-46 |
MS.gene06023 | MS.gene96344 | 0.810461 | 1.14E-50 | -1.69E-46 |
MS.gene06023 | MS.gene98636 | 0.809905 | 1.50E-50 | -1.69E-46 |
MS.gene06023 | MS.gene99096 | 0.815245 | 1.02E-51 | -1.69E-46 |
MS.gene06023 | MS.gene99431 | 0.814529 | 1.47E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06023.t1 | MTR_8g099035 | 92.517 | 147 | 11 | 0 | 1 | 147 | 81 | 227 | 2.85e-96 | 277 |
MS.gene06023.t1 | MTR_8g028475 | 38.393 | 112 | 68 | 1 | 19 | 130 | 93 | 203 | 2.66e-21 | 85.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06023.t1 | AT2G46150 | 33.871 | 124 | 80 | 2 | 19 | 141 | 93 | 215 | 1.58e-19 | 81.3 |
MS.gene06023.t1 | AT3G54200 | 31.868 | 91 | 62 | 0 | 25 | 115 | 114 | 204 | 8.75e-11 | 58.2 |
Find 31 sgRNAs with CRISPR-Local
Find 34 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGTTGAAACTTCCACTTATA+AGG | 0.143507 | 4.1:+5118692 | None:intergenic |
TATTGGATTCATTAATATTT+AGG | 0.155942 | 4.1:-5118284 | None:intergenic |
ATACAAATTCATTCACTTTC+AGG | 0.174928 | 4.1:-5118618 | MS.gene06023:CDS |
TTCTATAATGGAATTGATAT+TGG | 0.258144 | 4.1:-5118571 | MS.gene06023:CDS |
AATATGTTCAAGAGGTCAAT+TGG | 0.340166 | 4.1:-5118373 | MS.gene06023:CDS |
GTTGAAACTTCCACTTATAA+GGG | 0.363902 | 4.1:+5118693 | None:intergenic |
ACACGTGGTGATAATTGTAT+TGG | 0.405537 | 4.1:-5118301 | MS.gene06023:CDS |
AATTCATTCACTTTCAGGTA+TGG | 0.412565 | 4.1:-5118613 | MS.gene06023:CDS |
AGTACTTATACGAAGATCAA+TGG | 0.434098 | 4.1:-5118412 | MS.gene06023:CDS |
AGCTTGTGGACAATCAAGAT+TGG | 0.439651 | 4.1:-5118468 | MS.gene06023:CDS |
ATATGTTCAAGAGGTCAATT+GGG | 0.448508 | 4.1:-5118372 | MS.gene06023:CDS |
AATAGTGTTACCCTTATAAG+TGG | 0.474862 | 4.1:-5118703 | MS.gene06023:CDS |
ATTCATTCACTTTCAGGTAT+GGG | 0.482613 | 4.1:-5118612 | MS.gene06023:CDS |
TATAATGGAATTGATATTGG+AGG | 0.495203 | 4.1:-5118568 | MS.gene06023:CDS |
AGTACATACGATATCCCAAC+AGG | 0.525073 | 4.1:-5118331 | MS.gene06023:CDS |
AAAAGCTAAGGCGCAAAGAA+CGG | 0.530162 | 4.1:-5118527 | MS.gene06023:CDS |
CACGTGTGATTGAACCTGTT+GGG | 0.532056 | 4.1:+5118317 | None:intergenic |
TTCATTCACTTTCAGGTATG+GGG | 0.551722 | 4.1:-5118611 | MS.gene06023:CDS |
AATGGAATTGATATTGGAGG+AGG | 0.560744 | 4.1:-5118565 | MS.gene06023:CDS |
CTTATAAGTGGAAGTTTCAA+CGG | 0.570737 | 4.1:-5118691 | MS.gene06023:CDS |
TGGAGGAGGAATACAACCAC+CGG | 0.577353 | 4.1:-5118551 | MS.gene06023:CDS |
ACAACCACCGGGAAAAGCTA+AGG | 0.582230 | 4.1:-5118539 | MS.gene06023:CDS |
AAATATTGAATATGTTCAAG+AGG | 0.596331 | 4.1:-5118381 | MS.gene06023:CDS |
CCACGTGTGATTGAACCTGT+TGG | 0.609505 | 4.1:+5118316 | None:intergenic |
CTAAGGCGCAAAGAACGGCA+AGG | 0.613584 | 4.1:-5118522 | MS.gene06023:CDS |
GGCAAGGGTAAACGTGACAT+TGG | 0.620256 | 4.1:-5118506 | MS.gene06023:CDS |
TAAGGCGCAAAGAACGGCAA+GGG | 0.636962 | 4.1:-5118521 | MS.gene06023:CDS |
TATGTTCAAGAGGTCAATTG+GGG | 0.679448 | 4.1:-5118371 | MS.gene06023:CDS |
GGAGGAGGAATACAACCACC+GGG | 0.691763 | 4.1:-5118550 | MS.gene06023:CDS |
CCAACAGGTTCAATCACACG+TGG | 0.713111 | 4.1:-5118316 | MS.gene06023:CDS |
AATTCCATTATAGAAAACAG+TGG | 0.718426 | 4.1:+5118579 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATATTGAATATGTTCAAG+AGG | - | chr4.1:5118610-5118629 | MS.gene06023:CDS | 20.0% |
!!! | TTCTATAATGGAATTGATAT+TGG | - | chr4.1:5118420-5118439 | MS.gene06023:CDS | 20.0% |
! | AATTCCATTATAGAAAACAG+TGG | + | chr4.1:5118415-5118434 | None:intergenic | 25.0% |
! | ATACAAATTCATTCACTTTC+AGG | - | chr4.1:5118373-5118392 | MS.gene06023:CDS | 25.0% |
!! | TATAATGGAATTGATATTGG+AGG | - | chr4.1:5118423-5118442 | MS.gene06023:CDS | 25.0% |
AATAGTGTTACCCTTATAAG+TGG | - | chr4.1:5118288-5118307 | MS.gene06023:CDS | 30.0% | |
AATATGTTCAAGAGGTCAAT+TGG | - | chr4.1:5118618-5118637 | MS.gene06023:CDS | 30.0% | |
AGTACTTATACGAAGATCAA+TGG | - | chr4.1:5118579-5118598 | MS.gene06023:CDS | 30.0% | |
ATATGTTCAAGAGGTCAATT+GGG | - | chr4.1:5118619-5118638 | MS.gene06023:CDS | 30.0% | |
CTTATAAGTGGAAGTTTCAA+CGG | - | chr4.1:5118300-5118319 | MS.gene06023:CDS | 30.0% | |
GTTGAAACTTCCACTTATAA+GGG | + | chr4.1:5118301-5118320 | None:intergenic | 30.0% | |
! | AACACCACTGTTTTCTATAA+TGG | - | chr4.1:5118408-5118427 | MS.gene06023:CDS | 30.0% |
! | AATTCATTCACTTTCAGGTA+TGG | - | chr4.1:5118378-5118397 | MS.gene06023:CDS | 30.0% |
! | ATTCATTCACTTTCAGGTAT+GGG | - | chr4.1:5118379-5118398 | MS.gene06023:CDS | 30.0% |
AATGGAATTGATATTGGAGG+AGG | - | chr4.1:5118426-5118445 | MS.gene06023:CDS | 35.0% | |
ACACGTGGTGATAATTGTAT+TGG | - | chr4.1:5118690-5118709 | MS.gene06023:CDS | 35.0% | |
CGTTGAAACTTCCACTTATA+AGG | + | chr4.1:5118302-5118321 | None:intergenic | 35.0% | |
GATTAATGCGAAAAAGCTTG+TGG | - | chr4.1:5118509-5118528 | MS.gene06023:CDS | 35.0% | |
TATGTTCAAGAGGTCAATTG+GGG | - | chr4.1:5118620-5118639 | MS.gene06023:CDS | 35.0% | |
! | TTCATTCACTTTCAGGTATG+GGG | - | chr4.1:5118380-5118399 | MS.gene06023:CDS | 35.0% |
AAAAGCTAAGGCGCAAAGAA+CGG | - | chr4.1:5118464-5118483 | MS.gene06023:CDS | 40.0% | |
AGCTTGTGGACAATCAAGAT+TGG | - | chr4.1:5118523-5118542 | MS.gene06023:CDS | 40.0% | |
AGTACATACGATATCCCAAC+AGG | - | chr4.1:5118660-5118679 | MS.gene06023:CDS | 40.0% | |
CACGTGTGATTGAACCTGTT+GGG | + | chr4.1:5118677-5118696 | None:intergenic | 45.0% | |
ACAACCACCGGGAAAAGCTA+AGG | - | chr4.1:5118452-5118471 | MS.gene06023:CDS | 50.0% | |
CCAACAGGTTCAATCACACG+TGG | - | chr4.1:5118675-5118694 | MS.gene06023:CDS | 50.0% | |
CCACGTGTGATTGAACCTGT+TGG | + | chr4.1:5118678-5118697 | None:intergenic | 50.0% | |
GGCAAGGGTAAACGTGACAT+TGG | - | chr4.1:5118485-5118504 | MS.gene06023:CDS | 50.0% | |
TAAGGCGCAAAGAACGGCAA+GGG | - | chr4.1:5118470-5118489 | MS.gene06023:CDS | 50.0% | |
TGGAGGAGGAATACAACCAC+CGG | - | chr4.1:5118440-5118459 | MS.gene06023:CDS | 50.0% | |
!! | CTTTGCGCCTTAGCTTTTCC+CGG | + | chr4.1:5118462-5118481 | None:intergenic | 50.0% |
CTAAGGCGCAAAGAACGGCA+AGG | - | chr4.1:5118469-5118488 | MS.gene06023:CDS | 55.0% | |
GGAGGAGGAATACAACCACC+GGG | - | chr4.1:5118441-5118460 | MS.gene06023:CDS | 55.0% | |
!! | TGCGCCTTAGCTTTTCCCGG+TGG | + | chr4.1:5118459-5118478 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 5118285 | 5118728 | 5118285 | ID=MS.gene06023 |
chr4.1 | mRNA | 5118285 | 5118728 | 5118285 | ID=MS.gene06023.t1;Parent=MS.gene06023 |
chr4.1 | exon | 5118285 | 5118728 | 5118285 | ID=MS.gene06023.t1.exon1;Parent=MS.gene06023.t1 |
chr4.1 | CDS | 5118285 | 5118728 | 5118285 | ID=cds.MS.gene06023.t1;Parent=MS.gene06023.t1 |
Gene Sequence |
Protein sequence |