AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene99801

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99801.t1 MTR_2g082190 96.371 496 16 1 368 863 357 850 0.0 962
MS.gene99801.t1 MTR_4g081410 69.020 510 137 9 367 873 493 984 0.0 672
MS.gene99801.t1 MTR_4g081410 46.259 147 65 2 8 154 1 133 4.54e-30 128
MS.gene99801.t1 MTR_4g081410 69.020 510 137 9 367 873 499 990 0.0 671
MS.gene99801.t1 MTR_4g081410 46.358 151 67 2 4 154 3 139 5.81e-32 134
MS.gene99801.t1 MTR_4g045670 64.389 483 158 7 397 871 379 855 0.0 583
MS.gene99801.t1 MTR_2g089040 59.534 472 184 4 398 866 365 832 0.0 555
MS.gene99801.t1 MTR_4g095780 48.539 445 193 10 385 813 389 813 1.29e-118 381
MS.gene99801.t1 MTR_5g015690 49.531 426 195 7 395 813 452 864 2.98e-118 381
MS.gene99801.t1 MTR_1g083260 47.268 421 203 8 408 822 497 904 5.53e-116 375
MS.gene99801.t1 MTR_8g027995 48.792 414 194 7 406 813 624 1025 2.43e-113 372
MS.gene99801.t1 MTR_7g080920 46.452 465 218 10 366 821 531 973 5.12e-113 370
MS.gene99801.t1 MTR_4g087890 46.429 448 209 8 394 819 416 854 6.99e-113 366
MS.gene99801.t1 MTR_5g036540 41.096 438 238 7 404 823 359 794 6.64e-89 300
MS.gene99801.t1 MTR_8g062830 38.202 445 250 11 397 823 298 735 2.68e-83 283
MS.gene99801.t1 MTR_3g078623 38.186 474 242 9 361 825 213 644 1.44e-81 277
MS.gene99801.t1 MTR_1g013800 24.248 499 304 12 345 829 1318 1756 4.80e-31 132
MS.gene99801.t1 MTR_5g026645 24.356 505 306 13 350 839 590 1033 7.84e-29 124
MS.gene99801.t1 MTR_5g026645 24.356 505 306 13 350 839 749 1192 8.99e-29 124
MS.gene99801.t1 MTR_5g026645 24.356 505 306 13 350 839 764 1207 9.07e-29 124
MS.gene99801.t1 MTR_4g131020 23.340 467 296 10 387 834 761 1184 1.14e-27 121
MS.gene99801.t1 MTR_4g109040 25.127 394 231 12 406 783 834 1179 1.14e-27 121
MS.gene99801.t1 MTR_4g109040 25.127 394 231 12 406 783 1168 1513 3.56e-27 119
MS.gene99801.t1 MTR_4g131020 25.993 277 187 6 387 646 761 1036 3.51e-26 116
MS.gene99801.t1 MTR_3g037080 25.984 254 174 6 404 646 1504 1754 1.73e-22 104
MS.gene99801.t1 MTR_0094s0010 38.750 80 46 2 746 822 4 83 2.85e-13 66.6
MS.gene99801.t1 MTR_0094s0010 39.474 76 43 2 750 822 2 77 7.95e-13 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99801.t1 AT5G54650 64.458 498 159 6 376 871 419 900 0.0 605
MS.gene99801.t1 AT5G54650 64.458 498 159 6 376 871 419 900 0.0 605
MS.gene99801.t1 AT5G67470 48.222 450 207 6 399 844 452 879 3.17e-121 389
MS.gene99801.t1 AT3G25500 48.131 428 197 7 393 813 582 991 1.51e-116 380
MS.gene99801.t1 AT3G05470 47.529 425 198 7 408 822 470 879 9.87e-115 371
MS.gene99801.t1 AT2G43800 46.370 427 210 7 399 819 438 851 8.36e-113 366
MS.gene99801.t1 AT1G59910 39.952 418 235 7 403 813 457 865 1.01e-83 288
MS.gene99801.t1 AT1G70140 38.610 518 261 11 311 815 242 715 1.14e-82 282
MS.gene99801.t1 AT5G48360 37.838 407 198 9 416 813 420 780 3.07e-67 239
MS.gene99801.t1 AT3G07540 32.319 427 218 10 399 814 469 835 4.05e-47 181
MS.gene99801.t1 AT1G24150 42.925 212 116 3 406 614 310 519 1.42e-45 172
MS.gene99801.t1 AT1G31810 27.891 294 191 6 372 648 774 1063 8.10e-29 125
MS.gene99801.t1 AT1G31810 27.891 294 191 6 372 648 774 1063 8.10e-29 125
MS.gene99801.t1 AT5G07740 29.134 254 171 5 400 646 1216 1467 2.46e-28 123
MS.gene99801.t1 AT5G07740 29.134 254 171 5 400 646 1238 1489 2.58e-28 123
MS.gene99801.t1 AT5G58160 26.263 297 193 7 357 646 803 1080 2.15e-25 114
MS.gene99801.t1 AT5G07740 27.055 292 162 8 400 646 1238 1523 2.31e-24 110
MS.gene99801.t1 AT2G25050 24.643 280 178 5 399 646 735 1013 1.05e-21 102
MS.gene99801.t1 AT5G07770 26.333 300 191 9 404 692 187 467 6.42e-20 95.9
MS.gene99801.t1 AT5G07770 26.333 300 191 9 404 692 194 474 7.27e-20 95.5
MS.gene99801.t1 AT5G07770 25.896 251 166 5 404 646 53 291 1.83e-19 94.0
MS.gene99801.t1 AT5G07770 28.571 224 148 5 474 692 224 440 1.62e-18 91.3
MS.gene99801.t1 AT3G32400 25.770 357 227 8 299 646 13 340 4.93e-17 85.5
MS.gene99801.t1 AT5G07760 23.906 297 178 6 474 765 523 776 5.13e-17 86.7
MS.gene99801.t1 AT5G07760 23.906 297 178 6 474 765 523 776 6.54e-17 86.3
MS.gene99801.t1 AT5G07650 25.714 210 153 2 439 646 435 643 9.53e-17 85.5
MS.gene99801.t1 AT5G07650 23.504 234 152 3 439 646 435 667 4.89e-13 73.6
MS.gene99801.t1 AT5G07780 26.136 176 127 2 474 646 144 319 1.83e-12 71.2
MS.gene99801.t1 AT3G25493 34.831 89 47 2 747 824 45 133 9.17e-12 64.7
MS.gene99801.t1 AT3G32400 25.000 360 224 9 299 641 5 335 7.40e-11 66.2

Find 185 sgRNAs with CRISPR-Local

Find 376 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTACCAGGTGGAGGTTTC+AGG 0.125285 2.3:-14888621 None:intergenic
GGCGGTGGACGATGAGTTTC+TGG 0.160316 2.3:-14891401 None:intergenic
AGGAAGCTTTGATTCATTTA+AGG 0.179244 2.3:+14887513 MS.gene99801:CDS
TTATCTTGTTTCACATTCTT+TGG 0.186776 2.3:-14891347 None:intergenic
GGTAATAATTCAACAGTATA+TGG 0.204014 2.3:+14886399 MS.gene99801:CDS
TTCTTTGGTGTTGGTTTCTT+TGG 0.209468 2.3:-14891332 None:intergenic
TCCACCACCACCAGCGAAAC+CGG 0.283636 2.3:+14888879 MS.gene99801:CDS
ATTCATTTAAGGAAAGATAT+TGG 0.294417 2.3:+14887524 MS.gene99801:CDS
AGGAAAGATATTGGAGATCT+TGG 0.307252 2.3:+14887533 MS.gene99801:CDS
CTTGAAGCTGTTCTTAAAAC+AGG 0.312564 2.3:+14890675 MS.gene99801:CDS
CTAAAACTATCTGATGTAAA+AGG 0.323915 2.3:+14890759 MS.gene99801:CDS
GAATCTCAACCAGAGATTTC+AGG 0.325755 2.3:-14890192 None:intergenic
GGTGGTGGAGGAGGAGGCTT+AGG 0.333577 2.3:-14888865 None:intergenic
ATCAGGGTTTGAAGGAATTC+TGG 0.333997 2.3:-14890085 None:intergenic
TGATCCTGCATCTGGACTAT+TGG 0.336989 2.3:+14886528 MS.gene99801:CDS
ATGTTGGTGCCATCTTCATC+AGG 0.340858 2.3:-14890102 None:intergenic
GGACCACCATTTCCAGGTTT+CGG 0.341832 2.3:-14888844 None:intergenic
TTAGATGCTGATGGTTTAAC+AGG 0.343190 2.3:+14891011 MS.gene99801:CDS
CCTCCGCCTCCTCCACCTCC+TGG 0.343258 2.3:+14888745 MS.gene99801:CDS
GATTTCTGAGCTAATTTCAT+TGG 0.344293 2.3:-14887588 None:intergenic
CTGCTAGGCGTTTCTATTCC+AGG 0.348931 2.3:-14888763 None:intergenic
AACAATTTAGACGGTGATAA+GGG 0.352857 2.3:+14891098 MS.gene99801:CDS
CTAAAGGTCTAGGACCCTTT+TGG 0.362464 2.3:-14888960 None:intergenic
TCCATTCGTTTAAAAGCAAA+TGG 0.362540 2.3:-14890214 None:intergenic
CTTTCTTTGAGTCAATGATT+TGG 0.362650 2.3:-14889473 None:intergenic
CTCGTTCCAGGTTGCTAGTA+AGG 0.363942 2.3:+14890620 MS.gene99801:intron
GGCTTAGGACCACCATTTCC+AGG 0.376836 2.3:-14888850 None:intergenic
GGAGGTGGAGGAGGCGGAGG+AGG 0.377444 2.3:-14888742 None:intergenic
TCATGTTTCGCCTCGACACT+TGG 0.379415 2.3:+14887742 MS.gene99801:CDS
TGTTTCCAGCAGTGGTAGAT+AGG 0.389487 2.3:+14891444 MS.gene99801:CDS
AACATGACGTAGATATCTTC+TGG 0.391536 2.3:-14887726 None:intergenic
CCAGGTTTCGGTGGTGGAGG+TGG 0.391590 2.3:-14888832 None:intergenic
CCCGGTTTCGCTGGTGGTGG+TGG 0.391977 2.3:-14888880 None:intergenic
TGTTTCACATTCTTTGGTGT+TGG 0.393924 2.3:-14891341 None:intergenic
TTTCTTAATAATGTTGGATA+AGG 0.396902 2.3:+14891286 MS.gene99801:CDS
CTCAACTTGGTCCGGCTGAT+CGG 0.398682 2.3:+14890167 MS.gene99801:CDS
ATGCTCGACAAAACCCTTAA+CGG 0.400671 2.3:-14891132 None:intergenic
GAAATGTTCCATCGTTCATT+CGG 0.402919 2.3:-14890701 None:intergenic
TCTGATGTAAAAGGAGTAGA+TGG 0.403720 2.3:+14890768 MS.gene99801:CDS
CCATTTCCAGGTTTCGGTGG+TGG 0.406813 2.3:-14888838 None:intergenic
AGCAAACTCAGATCAAACTA+TGG 0.409718 2.3:+14889083 MS.gene99801:CDS
GTGCTACTAGGTGATTCCTT+TGG 0.413288 2.3:-14887566 None:intergenic
TTCGCTGGTGGTGGTGGAGG+AGG 0.414427 2.3:-14888874 None:intergenic
TCGGGCTGCTCTTAATCCTT+CGG 0.418787 2.3:-14890835 None:intergenic
GCTGGTGGTGGTGGAGGAGG+AGG 0.419258 2.3:-14888871 None:intergenic
GTAAGAGCTCCTCCGCCATT+TGG 0.420375 2.3:+14888937 MS.gene99801:CDS
GGAGCTCTTACACCACTCTT+AGG 0.421489 2.3:-14888925 None:intergenic
TCCTCCGCCATTTGGCCAAA+AGG 0.421543 2.3:+14888945 MS.gene99801:CDS
ACTCAGATCAAACTATGGTT+TGG 0.427166 2.3:+14889088 MS.gene99801:CDS
TTCGGTGGTGGAGGTGGAGG+AGG 0.428489 2.3:-14888826 None:intergenic
CCAGGAGGTGGAGGAGGCGG+AGG 0.429487 2.3:-14888745 None:intergenic
GTTCGTGATGCACTACTTGA+AGG 0.431387 2.3:+14889546 MS.gene99801:CDS
TTCAGGTCAAATGAAGGTCT+TGG 0.431812 2.3:-14888604 None:intergenic
CCACCTCCACCACCGAAACC+TGG 0.433893 2.3:+14888832 MS.gene99801:CDS
GTTCAAGAAAAGGCTGTTGT+TGG 0.435872 2.3:+14888997 MS.gene99801:CDS
AGTGGTGGTCTTGCTCAACT+TGG 0.441374 2.3:+14890154 MS.gene99801:CDS
CTAATTTCATTGGTGCTACT+AGG 0.442937 2.3:-14887578 None:intergenic
GGTTTCGGTGGTGGAGGTGG+AGG 0.443619 2.3:-14888829 None:intergenic
GGCGTTTCTATTCCAGGAGG+TGG 0.445753 2.3:-14888757 None:intergenic
GAAAGAGGATCAAATCTTCC+AGG 0.446400 2.3:-14888676 None:intergenic
GAACAATTTAGACGGTGATA+AGG 0.447793 2.3:+14891097 MS.gene99801:CDS
AGGAGGCGGAGGAGGATTAA+CGG 0.447831 2.3:-14888734 None:intergenic
CAACTATTTGATCCTGCATC+TGG 0.450629 2.3:+14886520 MS.gene99801:CDS
ACGTGATTTCTTAATAATGT+TGG 0.452407 2.3:+14891280 MS.gene99801:CDS
CAGGTTTAATGAAGAAATGA+TGG 0.453857 2.3:+14889362 MS.gene99801:intron
GACTTCAGGCAGAGATGCTA+TGG 0.455099 2.3:+14887480 MS.gene99801:intron
GGTTTCGCTGGTGGTGGTGG+AGG 0.455786 2.3:-14888877 None:intergenic
CCACCACCGAAACCTGGAAA+TGG 0.460099 2.3:+14888838 MS.gene99801:CDS
CGAGGACCACCCGGTTTCGC+TGG 0.464139 2.3:-14888889 None:intergenic
CCTCCGCCATTTGGCCAAAA+GGG 0.469716 2.3:+14888946 MS.gene99801:CDS
CCACCTGGTAGGGCAGGAAA+TGG 0.472574 2.3:+14888631 MS.gene99801:CDS
CAGATGCAGGATCAAATAGT+TGG 0.473030 2.3:-14886519 None:intergenic
TTTAGTTCTTCCTCTGATGT+TGG 0.475205 2.3:-14890118 None:intergenic
CTGCTCTTAATCCTTCGGTT+CGG 0.475915 2.3:-14890830 None:intergenic
CAACTTGAAGACCGAGTTCG+CGG 0.477053 2.3:-14890941 None:intergenic
ATTCCAGGAGGTGGAGGAGG+CGG 0.483155 2.3:-14888748 None:intergenic
GATCCACCAGCTAAAGGTCT+AGG 0.483765 2.3:-14888970 None:intergenic
TGATCGGTTCCTGAAATCTC+TGG 0.484368 2.3:+14890183 MS.gene99801:CDS
GGGAGTGCAGGAAGAGATGA+AGG 0.497222 2.3:+14891236 MS.gene99801:CDS
CTAAAGTTGCAAAAGACTCT+CGG 0.498477 2.3:-14890282 None:intergenic
CCATCTTCATCAGGGTTTGA+AGG 0.502258 2.3:-14890093 None:intergenic
TTTCCTGCCCTACCAGGTGG+AGG 0.502340 2.3:-14888628 None:intergenic
ACTCTCCTATCTACCACTGC+TGG 0.504037 2.3:-14891449 None:intergenic
TCTATTCCAGGAGGTGGAGG+AGG 0.504289 2.3:-14888751 None:intergenic
GACTGTGGTTCATTTGAAAG+AGG 0.504981 2.3:-14888691 None:intergenic
TGTTGTAGATGTTGTGGAAG+TGG 0.507308 2.3:+14887896 MS.gene99801:CDS
TTTCCAGGTTTCGGTGGTGG+AGG 0.508336 2.3:-14888835 None:intergenic
ATACCATTTCCTGCCCTACC+AGG 0.511705 2.3:-14888634 None:intergenic
TTAGGAGGCGGTGGTGGACG+AGG 0.514544 2.3:-14888907 None:intergenic
CAAGATTAATGTCTTCAAGA+AGG 0.514869 2.3:-14890902 None:intergenic
GGACCGCCACCACTAGGCTT+CGG 0.516991 2.3:-14888805 None:intergenic
CCTTCAAACCCTGATGAAGA+TGG 0.518374 2.3:+14890093 MS.gene99801:CDS
AAGGCTGTTGTTGGTTCAGA+AGG 0.518631 2.3:+14889006 MS.gene99801:CDS
GAAGATCATTACCGCGAACT+CGG 0.521402 2.3:+14890930 MS.gene99801:CDS
TAAAGTTGCAAAAGACTCTC+GGG 0.521682 2.3:-14890281 None:intergenic
TGGATCAAAAGTTCAAGAAA+AGG 0.521862 2.3:+14888987 MS.gene99801:CDS
AAACCTCCACCTGGTAGGGC+AGG 0.523719 2.3:+14888625 MS.gene99801:CDS
GTTTCTATTCCAGGAGGTGG+AGG 0.524131 2.3:-14888754 None:intergenic
TGCCATAGCTATAACTGCAT+TGG 0.524216 2.3:+14887838 MS.gene99801:CDS
CGAGCGATTGTTTCCAGCAG+TGG 0.524863 2.3:+14891436 MS.gene99801:CDS
CCACCACCACCAGCGAAACC+GGG 0.527329 2.3:+14888880 MS.gene99801:CDS
CACCAATGCAGTTATAGCTA+TGG 0.527972 2.3:-14887840 None:intergenic
CCACTCTTAGGAGGCGGTGG+TGG 0.530043 2.3:-14888913 None:intergenic
AGCAAGAGTGATTACTCTGT+TGG 0.530075 2.3:+14887959 MS.gene99801:CDS
ACAGGAACAACAGCTAGATT+AGG 0.531477 2.3:+14891029 MS.gene99801:CDS
GCACCGAAGCCTAGTGGTGG+CGG 0.531669 2.3:+14888802 MS.gene99801:CDS
TGGACTATTGGATGAGGATA+CGG 0.531729 2.3:+14886540 MS.gene99801:CDS
CTTCCAGGAGGAGGTTTCAA+AGG 0.532912 2.3:-14888661 None:intergenic
ATGGCTCTTGTGAAGAGTAC+TGG 0.533568 2.3:+14891200 MS.gene99801:CDS
GTAATAATTCAACAGTATAT+GGG 0.533992 2.3:+14886400 MS.gene99801:CDS
AATGTCTTCAAGAAGGTCCT+CGG 0.535036 2.3:-14890895 None:intergenic
AGATGCAGGATCAAATAGTT+GGG 0.535246 2.3:-14886518 None:intergenic
GATTTCAGGAACCGATCAGC+CGG 0.536024 2.3:-14890178 None:intergenic
CCACCCGGTTTCGCTGGTGG+TGG 0.536669 2.3:-14888883 None:intergenic
CCTGAAACCTCCACCTGGTA+GGG 0.540596 2.3:+14888621 MS.gene99801:CDS
CCACCTTTGAAACCTCCTCC+TGG 0.543216 2.3:+14888658 MS.gene99801:CDS
ATGAACGATGGAACATTTCG+AGG 0.547179 2.3:+14890705 MS.gene99801:CDS
TGGTCTTGCTCAACTTGGTC+CGG 0.547417 2.3:+14890159 MS.gene99801:CDS
CTCTTGCTCATGCTGAGAAG+TGG 0.550094 2.3:-14887944 None:intergenic
AAACGATGCTTATGTGGGAT+CGG 0.551160 2.3:+14887697 MS.gene99801:CDS
GGATCAAATCTTCCAGGAGG+AGG 0.554128 2.3:-14888670 None:intergenic
TTACATGACTACTCTTCAAG+AGG 0.554868 2.3:+14890246 MS.gene99801:CDS
TTATGTTGTTGTAGATGTTG+TGG 0.556852 2.3:+14887890 MS.gene99801:CDS
GAACAGCTTCAAGAAGCTTG+AGG 0.558395 2.3:-14890665 None:intergenic
GATGCTATGGATTACTTGCA+AGG 0.559176 2.3:+14887493 MS.gene99801:CDS
AGAAGAAGAGAAGAAAATCA+TGG 0.559378 2.3:+14891181 MS.gene99801:CDS
GTTTGGAATCAACTCAAAGC+AGG 0.561607 2.3:+14889105 MS.gene99801:CDS
CCACCATTTCCAGGTTTCGG+TGG 0.564202 2.3:-14888841 None:intergenic
TCATCCAATAGTCCAGATGC+AGG 0.565151 2.3:-14886532 None:intergenic
TGTTGGTGCCATCTTCATCA+GGG 0.567332 2.3:-14890101 None:intergenic
AAAGATACTGCTAGTTCTAG+AGG 0.569240 2.3:+14891368 MS.gene99801:CDS
TCGCGAAAATCTGACGGCGG+TGG 0.571138 2.3:-14891416 None:intergenic
GGAGGAGGACCGCCACCACT+AGG 0.571983 2.3:-14888811 None:intergenic
CCACTAGGCTTCGGTGCGGG+AGG 0.573393 2.3:-14888796 None:intergenic
CCACCACTAGGCTTCGGTGC+GGG 0.576779 2.3:-14888799 None:intergenic
TGCATCTGGACTATTGGATG+AGG 0.577696 2.3:+14886534 MS.gene99801:CDS
ACACCACTCTTAGGAGGCGG+TGG 0.579181 2.3:-14888916 None:intergenic
GGACCACCCGGTTTCGCTGG+TGG 0.583166 2.3:-14888886 None:intergenic
GGAGGTTTCAGGTCAAATGA+AGG 0.584390 2.3:-14888610 None:intergenic
CAACAGAATGATAAAATCAA+AGG 0.588922 2.3:+14889405 MS.gene99801:CDS
AAGGGTCCTAGACCTTTAGC+TGG 0.593350 2.3:+14888964 MS.gene99801:CDS
GGAGGAATGACACCACTGCT+AGG 0.594048 2.3:-14888778 None:intergenic
CCAGGAGGAGGTTTCAAAGG+TGG 0.595560 2.3:-14888658 None:intergenic
CCACCACCGCCTCCTAAGAG+TGG 0.598949 2.3:+14888913 MS.gene99801:CDS
CAGAATGATAAAATCAAAGG+TGG 0.603431 2.3:+14889408 MS.gene99801:CDS
ACAATTTAGACGGTGATAAG+GGG 0.606059 2.3:+14891099 MS.gene99801:CDS
GCAGCAGCATTAGATGCTGA+TGG 0.606061 2.3:+14891002 MS.gene99801:CDS
ATACTGAGGTGTATCACGTA+AGG 0.606224 2.3:-14889448 None:intergenic
TTCAGATGATGACAGTCCAT+AGG 0.607063 2.3:+14891484 MS.gene99801:CDS
AGGGTTTGAAGGAATTCTGG+TGG 0.608476 2.3:-14890082 None:intergenic
CCACCGAAACCTGGAAATGG+TGG 0.613467 2.3:+14888841 MS.gene99801:CDS
ACCTGAAACCTCCACCTGGT+AGG 0.613751 2.3:+14888620 MS.gene99801:CDS
GGTCCTAGACCTTTAGCTGG+TGG 0.614496 2.3:+14888967 MS.gene99801:CDS
CATGTTTCGCCTCGACACTT+GGG 0.614612 2.3:+14887743 MS.gene99801:CDS
CCCGCACCGAAGCCTAGTGG+TGG 0.615428 2.3:+14888799 MS.gene99801:CDS
AGATTTCATAAACAAAGAGA+TGG 0.619315 2.3:+14891073 MS.gene99801:CDS
GCTCTTACACCACTCTTAGG+AGG 0.619882 2.3:-14888922 None:intergenic
GGGTTTGAAGGAATTCTGGT+GGG 0.622489 2.3:-14890081 None:intergenic
TCAGAAGTCTTAACTGACTG+TGG 0.622598 2.3:-14888706 None:intergenic
GGAATAGAAACGCCTAGCAG+TGG 0.622924 2.3:+14888766 MS.gene99801:CDS
CCTCCCGCACCGAAGCCTAG+TGG 0.625183 2.3:+14888796 MS.gene99801:CDS
GAAGATGGCACCAACATCAG+AGG 0.626240 2.3:+14890108 MS.gene99801:CDS
GAGTTAGACAAACTGATGAA+AGG 0.628143 2.3:+14887921 MS.gene99801:CDS
CAAGAGATAATCCGAACCGA+AGG 0.628886 2.3:+14890819 MS.gene99801:CDS
TCTTGGCTTATGCATACCAA+AGG 0.634402 2.3:+14887550 MS.gene99801:CDS
TCACTAAATGAGGAGAAACA+TGG 0.637364 2.3:+14888520 MS.gene99801:CDS
AATCGCTCGCGAAAATCTGA+CGG 0.637744 2.3:-14891422 None:intergenic
CTTACACCACTCTTAGGAGG+CGG 0.638813 2.3:-14888919 None:intergenic
GGTGGTGGACGAGGACCACC+CGG 0.645287 2.3:-14888898 None:intergenic
AGCAGTGGTAGATAGGAGAG+TGG 0.648892 2.3:+14891451 MS.gene99801:CDS
ACAGGAAACCGAATGAACGA+TGG 0.649015 2.3:+14890693 MS.gene99801:CDS
GTTGTTGGTTCAGAAGGTGA+AGG 0.650438 2.3:+14889012 MS.gene99801:CDS
ACAACAGCTAGATTAGGCCA+TGG 0.652796 2.3:+14891035 MS.gene99801:CDS
CCATTTCCTGCCCTACCAGG+TGG 0.654093 2.3:-14888631 None:intergenic
TATAAGCATTGAAGAACACA+AGG 0.662657 2.3:+14886474 MS.gene99801:CDS
TTTGACCTGAAACCTCCACC+TGG 0.664115 2.3:+14888616 MS.gene99801:CDS
GAGATGGCGAACAATTTAGA+CGG 0.672384 2.3:+14891089 MS.gene99801:CDS
GCCACCACTAGGCTTCGGTG+CGG 0.675932 2.3:-14888800 None:intergenic
CGCTCGCGAAAATCTGACGG+CGG 0.688519 2.3:-14891419 None:intergenic
CCACCACCAGCGAAACCGGG+TGG 0.696337 2.3:+14888883 MS.gene99801:CDS
AACGATGGAACATTTCGAGG+AGG 0.696651 2.3:+14890708 MS.gene99801:CDS
CTAGGCGTTTCTATTCCAGG+AGG 0.705891 2.3:-14888760 None:intergenic
GGAGTGCAGGAAGAGATGAA+GGG 0.730427 2.3:+14891237 MS.gene99801:CDS
AGAGGATCAAATCTTCCAGG+AGG 0.731044 2.3:-14888673 None:intergenic
TCAATGATTTGGATATACTG+AGG 0.769854 2.3:-14889462 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAGTACTATTTTAATTAAAA+AGG - chr2.3:14889162-14889181 None:intergenic 10.0%
!! AAGTATATGAAATTAATTCT+AGG - chr2.3:14889709-14889728 None:intergenic 15.0%
!! CCAATAATATCTTAAAATTT+GGG + chr2.3:14886896-14886915 MS.gene99801:intron 15.0%
!! TCCAATAATATCTTAAAATT+TGG + chr2.3:14886895-14886914 MS.gene99801:intron 15.0%
!! TTGATAAATAAAAAGAGTTA+AGG - chr2.3:14890570-14890589 None:intergenic 15.0%
!!! TGTTAAAATAATGAAAGTAT+TGG - chr2.3:14886613-14886632 None:intergenic 15.0%
!! ACTTTAACAATAATTACATG+TGG - chr2.3:14887403-14887422 None:intergenic 20.0%
!! AGATGAATAATAATTTACCA+TGG + chr2.3:14889294-14889313 MS.gene99801:intron 20.0%
!! ATTCATTTAAGGAAAGATAT+TGG + chr2.3:14887524-14887543 MS.gene99801:CDS 20.0%
!! ATTTGTGGATTTAAAAATTG+AGG + chr2.3:14888369-14888388 MS.gene99801:intron 20.0%
!! GTAATAATTCAACAGTATAT+GGG + chr2.3:14886400-14886419 MS.gene99801:CDS 20.0%
!! TAAATAAAAAGAGTTAAGGA+CGG - chr2.3:14890566-14890585 None:intergenic 20.0%
!! TAATATCTTAAAATTTGGGT+TGG + chr2.3:14886900-14886919 MS.gene99801:intron 20.0%
!! TTATCAAAATGAAAACCAAT+TGG + chr2.3:14890583-14890602 MS.gene99801:intron 20.0%
!! TTTCTTAATAATGTTGGATA+AGG + chr2.3:14891286-14891305 MS.gene99801:CDS 20.0%
!! TTTGTGGATTTAAAAATTGA+GGG + chr2.3:14888370-14888389 MS.gene99801:intron 20.0%
!!! AGAATAGATTTTGAAACTAA+TGG - chr2.3:14887201-14887220 None:intergenic 20.0%
!!! CCCAAATTTTAAGATATTAT+TGG - chr2.3:14886899-14886918 None:intergenic 20.0%
!!! CGTCATTGATAATAATTTAA+TGG - chr2.3:14889866-14889885 None:intergenic 20.0%
!!! CTTTTTAATGCTATGTTATA+GGG + chr2.3:14888019-14888038 MS.gene99801:intron 20.0%
!!! GTCACATATTTTAAAATTTG+AGG + chr2.3:14888340-14888359 MS.gene99801:intron 20.0%
!!! TAAGTTAAAGCCTTTTTTTT+GGG + chr2.3:14889050-14889069 MS.gene99801:CDS 20.0%
! AACTTAAAAGGCTATGTAAA+TGG - chr2.3:14886590-14886609 None:intergenic 25.0%
! AATAATAATTTACCATGGCT+AGG + chr2.3:14889299-14889318 MS.gene99801:intron 25.0%
! AATATAACACTTTATATGGC+TGG + chr2.3:14887156-14887175 MS.gene99801:intron 25.0%
! AATATTATGTTATAGGTGTG+AGG - chr2.3:14886820-14886839 None:intergenic 25.0%
! AATTTGAGGAATCAAATTTG+TGG + chr2.3:14888354-14888373 MS.gene99801:intron 25.0%
! ACGTGATTTCTTAATAATGT+TGG + chr2.3:14891280-14891299 MS.gene99801:CDS 25.0%
! AGAGCCTATTCAAAATATAT+TGG - chr2.3:14887051-14887070 None:intergenic 25.0%
! AGATGTCTCTTATATAATGT+GGG + chr2.3:14887133-14887152 MS.gene99801:intron 25.0%
! AGATTTCATAAACAAAGAGA+TGG + chr2.3:14891073-14891092 MS.gene99801:CDS 25.0%
! AGTTCGACATTATAATATCA+AGG - chr2.3:14889228-14889247 None:intergenic 25.0%
! ATATTATGTTATAGGTGTGA+GGG - chr2.3:14886819-14886838 None:intergenic 25.0%
! ATCAACCAAAAACATATCAA+AGG - chr2.3:14890048-14890067 None:intergenic 25.0%
! CAACAGAATGATAAAATCAA+AGG + chr2.3:14889405-14889424 MS.gene99801:CDS 25.0%
! CACACCTATAACATAATATT+TGG + chr2.3:14886820-14886839 MS.gene99801:intron 25.0%
! CACTCCAAATATTATGTTAT+AGG - chr2.3:14886827-14886846 None:intergenic 25.0%
! CCTATAACATAGCATTAAAA+AGG - chr2.3:14888021-14888040 None:intergenic 25.0%
! CTAAAACTATCTGATGTAAA+AGG + chr2.3:14890759-14890778 MS.gene99801:CDS 25.0%
! CTAGTTTCAAATAGTTTGAT+TGG - chr2.3:14889738-14889757 None:intergenic 25.0%
! GATATGTGTGATATGATATT+AGG + chr2.3:14887021-14887040 MS.gene99801:intron 25.0%
! GGTAATAATTCAACAGTATA+TGG + chr2.3:14886399-14886418 MS.gene99801:CDS 25.0%
! GTGACACTAATAAGTAATTA+GGG + chr2.3:14889653-14889672 MS.gene99801:intron 25.0%
! GTTCGACATTATAATATCAA+GGG - chr2.3:14889227-14889246 None:intergenic 25.0%
! TAACATTGACATGTAAACAT+CGG - chr2.3:14890506-14890525 None:intergenic 25.0%
! TATATCATCATCATCATCAT+AGG - chr2.3:14888431-14888450 None:intergenic 25.0%
! TGGGAATATAACACTTTATA+TGG + chr2.3:14887152-14887171 MS.gene99801:intron 25.0%
! TGTACTTGAATCTTAATTAC+AGG + chr2.3:14888466-14888485 MS.gene99801:intron 25.0%
! TGTGACACTAATAAGTAATT+AGG + chr2.3:14889652-14889671 MS.gene99801:intron 25.0%
! TTCCTCAAATATTTGTTTGA+GGG - chr2.3:14886636-14886655 None:intergenic 25.0%
! TTCGAAAAATTCACTAAATG+AGG + chr2.3:14888510-14888529 MS.gene99801:CDS 25.0%
! TTCGACATTATAATATCAAG+GGG - chr2.3:14889226-14889245 None:intergenic 25.0%
! TTTCCTCAAATATTTGTTTG+AGG - chr2.3:14886637-14886656 None:intergenic 25.0%
!! ATTTTTCGCATTCACAATTT+CGG + chr2.3:14888066-14888085 MS.gene99801:intron 25.0%
!! CATTTCTAGAAGAAAATTGA+TGG - chr2.3:14889584-14889603 None:intergenic 25.0%
!! CCTTTTTAATGCTATGTTAT+AGG + chr2.3:14888018-14888037 MS.gene99801:intron 25.0%
!! TGATACCTTTGATATGTTTT+TGG + chr2.3:14890040-14890059 MS.gene99801:intron 25.0%
!! TTATCTTGTTTCACATTCTT+TGG - chr2.3:14891350-14891369 None:intergenic 25.0%
!!! AGAAAGTTTTGTTTCAAATG+TGG - chr2.3:14887662-14887681 None:intergenic 25.0%
!!! CATTTAGTGAATTTTTCGAA+GGG - chr2.3:14888510-14888529 None:intergenic 25.0%
!!! CTAAGTTAAAGCCTTTTTTT+TGG + chr2.3:14889049-14889068 MS.gene99801:CDS 25.0%
!!! TATTTTGACCAATATCCAAA+AGG - chr2.3:14889963-14889982 None:intergenic 25.0%
!!! TCAATCACTTTTAAAATCGA+GGG - chr2.3:14888121-14888140 None:intergenic 25.0%
!!! TCATTTAGTGAATTTTTCGA+AGG - chr2.3:14888511-14888530 None:intergenic 25.0%
!!! TGAAAGTATTGGAACTTAAA+AGG - chr2.3:14886602-14886621 None:intergenic 25.0%
!!! TGGTCCAATATATTTTGAAT+AGG + chr2.3:14887044-14887063 MS.gene99801:intron 25.0%
!!! TTGTTTTGCATTTCTATGTA+AGG - chr2.3:14889989-14890008 None:intergenic 25.0%
AAAATCAGCTTGTAAGATGA+AGG + chr2.3:14886767-14886786 MS.gene99801:intron 30.0%
AAAATCGTGGATTTAGAAAC+AGG - chr2.3:14888095-14888114 None:intergenic 30.0%
AAATCAGCTTGTAAGATGAA+GGG + chr2.3:14886768-14886787 MS.gene99801:intron 30.0%
AAATCGTGGATTTAGAAACA+GGG - chr2.3:14888094-14888113 None:intergenic 30.0%
AACAATTTAGACGGTGATAA+GGG + chr2.3:14891098-14891117 MS.gene99801:CDS 30.0%
AACCTAACTAAGATCCATTT+GGG - chr2.3:14886876-14886895 None:intergenic 30.0%
AATAGTATCATCAGATTCTC+TGG + chr2.3:14889629-14889648 MS.gene99801:intron 30.0%
AATGTATCCGTATGAAGTAT+TGG - chr2.3:14889919-14889938 None:intergenic 30.0%
AATTGAGGGATCAGAAAAAT+AGG + chr2.3:14888384-14888403 MS.gene99801:intron 30.0%
AGAAAAAACGATGCTTATGT+GGG + chr2.3:14887692-14887711 MS.gene99801:CDS 30.0%
AGAAGAAGAGAAGAAAATCA+TGG + chr2.3:14891181-14891200 MS.gene99801:CDS 30.0%
AGAGGTCATATAATTGCATA+TGG + chr2.3:14887243-14887262 MS.gene99801:intron 30.0%
AGTCTCAAAATGTATAACTG+GGG - chr2.3:14888150-14888169 None:intergenic 30.0%
ATGTGTGATATGATATTAGG+TGG + chr2.3:14887024-14887043 MS.gene99801:intron 30.0%
ATTGAGGGATCAGAAAAATA+GGG + chr2.3:14888385-14888404 MS.gene99801:intron 30.0%
CAAGATTAATGTCTTCAAGA+AGG - chr2.3:14890905-14890924 None:intergenic 30.0%
CAGAATGATAAAATCAAAGG+TGG + chr2.3:14889408-14889427 MS.gene99801:CDS 30.0%
CAGGTTTAATGAAGAAATGA+TGG + chr2.3:14889362-14889381 MS.gene99801:intron 30.0%
CAGTCTCAAAATGTATAACT+GGG - chr2.3:14888151-14888170 None:intergenic 30.0%
CATAAACCTGACATTAACAT+TGG - chr2.3:14890534-14890553 None:intergenic 30.0%
CTCTGTACCATCTTAAAATT+CGG + chr2.3:14887067-14887086 MS.gene99801:intron 30.0%
CTTTCTTTGAGTCAATGATT+TGG - chr2.3:14889476-14889495 None:intergenic 30.0%
GAGATGTCTCTTATATAATG+TGG + chr2.3:14887132-14887151 MS.gene99801:intron 30.0%
GATTTCTGAGCTAATTTCAT+TGG - chr2.3:14887591-14887610 None:intergenic 30.0%
TATTATGTTATAGGTGTGAG+GGG - chr2.3:14886818-14886837 None:intergenic 30.0%
TATTCATCTGCATCAAAAGA+AGG - chr2.3:14889283-14889302 None:intergenic 30.0%
TCAGTCTCAAAATGTATAAC+TGG - chr2.3:14888152-14888171 None:intergenic 30.0%
TCATATAATTGCATATGGCT+TGG + chr2.3:14887248-14887267 MS.gene99801:intron 30.0%
TCCATTCGTTTAAAAGCAAA+TGG - chr2.3:14890217-14890236 None:intergenic 30.0%
TCGGTCATAATGTAAAAAAG+TGG - chr2.3:14890487-14890506 None:intergenic 30.0%
TGGATCAAAAGTTCAAGAAA+AGG + chr2.3:14888987-14889006 MS.gene99801:CDS 30.0%
TTATGTTGTTGTAGATGTTG+TGG + chr2.3:14887890-14887909 MS.gene99801:CDS 30.0%
TTTCTCTAGTATAAAAACCG+AGG + chr2.3:14890878-14890897 MS.gene99801:CDS 30.0%
! AGGAAGCTTTGATTCATTTA+AGG + chr2.3:14887513-14887532 MS.gene99801:CDS 30.0%
! AGTTCTAACACGAACATTAA+AGG + chr2.3:14889779-14889798 MS.gene99801:intron 30.0%
! TACTACTCTCTTTTATCACT+CGG - chr2.3:14890857-14890876 None:intergenic 30.0%
! TCAATGATTTGGATATACTG+AGG - chr2.3:14889465-14889484 None:intergenic 30.0%
! TCATTTTACAACTGTTTACG+AGG + chr2.3:14889186-14889205 MS.gene99801:intron 30.0%
! TGAACTTCACATTTGAAATC+TGG - chr2.3:14887372-14887391 None:intergenic 30.0%
!! ATCTTACAAGCTGATTTTGT+AGG - chr2.3:14886765-14886784 None:intergenic 30.0%
!! GAAATGATGGAATCTCTTTT+TGG + chr2.3:14889375-14889394 MS.gene99801:CDS 30.0%
!! GTACTGGTGATTATTTTCAT+GGG + chr2.3:14891216-14891235 MS.gene99801:CDS 30.0%
!! GTGTACTTTTTGCATTGTTT+TGG + chr2.3:14886432-14886451 MS.gene99801:CDS 30.0%
!! TATAAGCATTGAAGAACACA+AGG + chr2.3:14886474-14886493 MS.gene99801:CDS 30.0%
!! TATCAAAGGTATCATACAAG+TGG - chr2.3:14890034-14890053 None:intergenic 30.0%
!! TCCATTTGCTTTTAAACGAA+TGG + chr2.3:14890213-14890232 MS.gene99801:CDS 30.0%
!! TCTTACAAGCTGATTTTGTA+GGG - chr2.3:14886764-14886783 None:intergenic 30.0%
!!! ACCTTACAAGTTGGTTTTTT+AGG - chr2.3:14887110-14887129 None:intergenic 30.0%
!!! AGTACTGGTGATTATTTTCA+TGG + chr2.3:14891215-14891234 MS.gene99801:CDS 30.0%
!!! ATTTTGAGACTGAATTTCGA+TGG + chr2.3:14888159-14888178 MS.gene99801:intron 30.0%
!!! CCTTACAAGTTGGTTTTTTA+GGG - chr2.3:14887109-14887128 None:intergenic 30.0%
!!! CTCTTGTTTTTATAAGACCA+TGG - chr2.3:14891055-14891074 None:intergenic 30.0%
!!! GGTTATAGTTTTATGACTTC+AGG + chr2.3:14887466-14887485 MS.gene99801:intron 30.0%
!!! GTCAATCACTTTTAAAATCG+AGG - chr2.3:14888122-14888141 None:intergenic 30.0%
!!! TGATATGTTTTTGGTTGATC+AGG + chr2.3:14890049-14890068 MS.gene99801:intron 30.0%
AAAATCAGCCGTAAATGCAA+AGG + chr2.3:14888307-14888326 MS.gene99801:intron 35.0%
AACATGACGTAGATATCTTC+TGG - chr2.3:14887729-14887748 None:intergenic 35.0%
ACAATTTAGACGGTGATAAG+GGG + chr2.3:14891099-14891118 MS.gene99801:CDS 35.0%
ACTCAGATCAAACTATGGTT+TGG + chr2.3:14889088-14889107 MS.gene99801:CDS 35.0%
AGACTACCAATGTTAATGTC+AGG + chr2.3:14890525-14890544 MS.gene99801:intron 35.0%
AGATGCAGGATCAAATAGTT+GGG - chr2.3:14886521-14886540 None:intergenic 35.0%
AGCAAACTCAGATCAAACTA+TGG + chr2.3:14889083-14889102 MS.gene99801:CDS 35.0%
AGGAAAGATATTGGAGATCT+TGG + chr2.3:14887533-14887552 MS.gene99801:CDS 35.0%
ATTATGTTATAGGTGTGAGG+GGG - chr2.3:14886817-14886836 None:intergenic 35.0%
CACCCTCAAACAAATATTTG+AGG + chr2.3:14886631-14886650 MS.gene99801:intron 35.0%
CCCTAAAAAACCAACTTGTA+AGG + chr2.3:14887106-14887125 MS.gene99801:intron 35.0%
CTAAAGTTGCAAAAGACTCT+CGG - chr2.3:14890285-14890304 None:intergenic 35.0%
CTTGAAGCTGTTCTTAAAAC+AGG + chr2.3:14890675-14890694 MS.gene99801:CDS 35.0%
GAAATGTTCCATCGTTCATT+CGG - chr2.3:14890704-14890723 None:intergenic 35.0%
GAACAATTTAGACGGTGATA+AGG + chr2.3:14891097-14891116 MS.gene99801:CDS 35.0%
GAACCTAACTAAGATCCATT+TGG - chr2.3:14886877-14886896 None:intergenic 35.0%
GAGAAAAAACGATGCTTATG+TGG + chr2.3:14887691-14887710 MS.gene99801:CDS 35.0%
GAGTTAGACAAACTGATGAA+AGG + chr2.3:14887921-14887940 MS.gene99801:CDS 35.0%
GATGAAGGAATGAATCCAAT+TGG - chr2.3:14890601-14890620 None:intergenic 35.0%
GTCTCAAAATGTATAACTGG+GGG - chr2.3:14888149-14888168 None:intergenic 35.0%
GTTTGTGCCAATACTTCATA+CGG + chr2.3:14889909-14889928 MS.gene99801:intron 35.0%
TAAAGTTGCAAAAGACTCTC+GGG - chr2.3:14890284-14890303 None:intergenic 35.0%
TCACTAAATGAGGAGAAACA+TGG + chr2.3:14888520-14888539 MS.gene99801:CDS 35.0%
TCTGATGTAAAAGGAGTAGA+TGG + chr2.3:14890768-14890787 MS.gene99801:CDS 35.0%
TGAACCTTGTCCCAAAAAAA+AGG - chr2.3:14889063-14889082 None:intergenic 35.0%
TGTCAGATACTGACACATAT+CGG - chr2.3:14889817-14889836 None:intergenic 35.0%
TTACATGACTACTCTTCAAG+AGG + chr2.3:14890246-14890265 MS.gene99801:CDS 35.0%
TTAGATGCTGATGGTTTAAC+AGG + chr2.3:14891011-14891030 MS.gene99801:CDS 35.0%
TTGCAAGTGAGTAACTTATG+TGG - chr2.3:14888279-14888298 None:intergenic 35.0%
! ACTACTCTCTTTTATCACTC+GGG - chr2.3:14890856-14890875 None:intergenic 35.0%
! AGAGTCTTTTGCAACTTTAG+AGG + chr2.3:14890285-14890304 MS.gene99801:CDS 35.0%
! CTAAAGCTTAGACTTTTCAG+TGG + chr2.3:14890136-14890155 MS.gene99801:CDS 35.0%
! TAGATGAGTGGACTCTAAAA+CGG + chr2.3:14887444-14887463 MS.gene99801:intron 35.0%
! TGTTTCACATTCTTTGGTGT+TGG - chr2.3:14891344-14891363 None:intergenic 35.0%
!! AAAGATACTGCTAGTTCTAG+AGG + chr2.3:14891368-14891387 MS.gene99801:CDS 35.0%
!! AGAAAGAGTGTCAAACAAGA+CGG - chr2.3:14886713-14886732 None:intergenic 35.0%
!! CTAATTTCATTGGTGCTACT+AGG - chr2.3:14887581-14887600 None:intergenic 35.0%
!! GGATCATCCGAATTTTAAGA+TGG - chr2.3:14887077-14887096 None:intergenic 35.0%
!! GTTGATGATGAATATGTGAC+AGG + chr2.3:14889343-14889362 MS.gene99801:intron 35.0%
!! TCTTTTGCAACTTTAGAGGT+AGG + chr2.3:14890289-14890308 MS.gene99801:intron 35.0%
!! TTCTTTGGTGTTGGTTTCTT+TGG - chr2.3:14891335-14891354 None:intergenic 35.0%
!! TTTAGTTCTTCCTCTGATGT+TGG - chr2.3:14890121-14890140 None:intergenic 35.0%
!!! AAAGCCTTTTTTTTGGGACA+AGG + chr2.3:14889056-14889075 MS.gene99801:CDS 35.0%
!!! ACAAACTGGTTTTGTATGGT+TGG - chr2.3:14886933-14886952 None:intergenic 35.0%
!!! CATGACAAACTGGTTTTGTA+TGG - chr2.3:14886937-14886956 None:intergenic 35.0%
AAACGATGCTTATGTGGGAT+CGG + chr2.3:14887697-14887716 MS.gene99801:CDS 40.0%
AAATCGAGGGACTAAAATCG+TGG - chr2.3:14888108-14888127 None:intergenic 40.0%
AAGAAGGACGAGTCTATGAT+AGG - chr2.3:14889267-14889286 None:intergenic 40.0%
AATGTCTTCAAGAAGGTCCT+CGG - chr2.3:14890898-14890917 None:intergenic 40.0%
ACACTTCAATTGTCTAGTCC+TGG - chr2.3:14887001-14887020 None:intergenic 40.0%
ACAGGAACAACAGCTAGATT+AGG + chr2.3:14891029-14891048 MS.gene99801:CDS 40.0%
ACATCTCTCACCTTACAAGT+TGG - chr2.3:14887119-14887138 None:intergenic 40.0%
ACTTGTCAGTGTCTAGTGAT+TGG + chr2.3:14889886-14889905 MS.gene99801:intron 40.0%
AGCAAGAGTGATTACTCTGT+TGG + chr2.3:14887959-14887978 MS.gene99801:CDS 40.0%
AGTAACTTATGTGGCACACA+TGG - chr2.3:14888270-14888289 None:intergenic 40.0%
ATACTGAGGTGTATCACGTA+AGG - chr2.3:14889451-14889470 None:intergenic 40.0%
ATCAGGGTTTGAAGGAATTC+TGG - chr2.3:14890088-14890107 None:intergenic 40.0%
ATGAACGATGGAACATTTCG+AGG + chr2.3:14890705-14890724 MS.gene99801:CDS 40.0%
ATGCTCGACAAAACCCTTAA+CGG - chr2.3:14891135-14891154 None:intergenic 40.0%
CAACTATTTGATCCTGCATC+TGG + chr2.3:14886520-14886539 MS.gene99801:CDS 40.0%
CACCAATGCAGTTATAGCTA+TGG - chr2.3:14887843-14887862 None:intergenic 40.0%
CAGATGCAGGATCAAATAGT+TGG - chr2.3:14886522-14886541 None:intergenic 40.0%
CCAACCATTTCTTAGATGAG+TGG + chr2.3:14887432-14887451 MS.gene99801:intron 40.0%
CCACTCATCTAAGAAATGGT+TGG - chr2.3:14887435-14887454 None:intergenic 40.0%
CTAGGGAGGTTCTTCAAATA+GGG + chr2.3:14888231-14888250 MS.gene99801:intron 40.0%
CTATTCTTCCAAGTGTCTTG+AGG + chr2.3:14887214-14887233 MS.gene99801:intron 40.0%
CTTGTCAGTGTCTAGTGATT+GGG + chr2.3:14889887-14889906 MS.gene99801:intron 40.0%
GAAAGAGGATCAAATCTTCC+AGG - chr2.3:14888679-14888698 None:intergenic 40.0%
GAATCTCAACCAGAGATTTC+AGG - chr2.3:14890195-14890214 None:intergenic 40.0%
GACTGTGGTTCATTTGAAAG+AGG - chr2.3:14888694-14888713 None:intergenic 40.0%
GAGATACTTATGTGGCTACA+TGG + chr2.3:14888190-14888209 MS.gene99801:intron 40.0%
GAGATGGCGAACAATTTAGA+CGG + chr2.3:14891089-14891108 MS.gene99801:CDS 40.0%
GAGTCCACTCATCTAAGAAA+TGG - chr2.3:14887439-14887458 None:intergenic 40.0%
GTTCAAGAAAAGGCTGTTGT+TGG + chr2.3:14888997-14889016 MS.gene99801:CDS 40.0%
TCAGAAGTCTTAACTGACTG+TGG - chr2.3:14888709-14888728 None:intergenic 40.0%
TCATACGGATACATTCACTG+AGG + chr2.3:14889924-14889943 MS.gene99801:intron 40.0%
TCTAGGGAGGTTCTTCAAAT+AGG + chr2.3:14888230-14888249 MS.gene99801:intron 40.0%
TCTCATAATAGGTGCCCAAA+TGG + chr2.3:14886859-14886878 MS.gene99801:intron 40.0%
TCTTGGCTTATGCATACCAA+AGG + chr2.3:14887550-14887569 MS.gene99801:CDS 40.0%
TGACGAGTGAGATACTTATG+TGG + chr2.3:14888182-14888201 MS.gene99801:intron 40.0%
TGCCATAGCTATAACTGCAT+TGG + chr2.3:14887838-14887857 MS.gene99801:CDS 40.0%
TGCCCAAATGGATCTTAGTT+AGG + chr2.3:14886871-14886890 MS.gene99801:intron 40.0%
TGGACTATTGGATGAGGATA+CGG + chr2.3:14886540-14886559 MS.gene99801:CDS 40.0%
TGTGTGTGATGAGATGTAAG+AGG - chr2.3:14886969-14886988 None:intergenic 40.0%
TGTTGTAGATGTTGTGGAAG+TGG + chr2.3:14887896-14887915 MS.gene99801:CDS 40.0%
TTAGTTCCTTACTAGCAACC+TGG - chr2.3:14890629-14890648 None:intergenic 40.0%
TTATGTGGCTACATGGTTGA+TGG + chr2.3:14888197-14888216 MS.gene99801:intron 40.0%
TTCAGGTCAAATGAAGGTCT+TGG - chr2.3:14888607-14888626 None:intergenic 40.0%
TTTCCCGACCTTTGCATTTA+CGG - chr2.3:14888318-14888337 None:intergenic 40.0%
! AACACTTTATATGGCTGGCT+AGG + chr2.3:14887161-14887180 MS.gene99801:intron 40.0%
! AAGCTTAGACTTTTCAGTGG+TGG + chr2.3:14890139-14890158 MS.gene99801:CDS 40.0%
! ACACTTTATATGGCTGGCTA+GGG + chr2.3:14887162-14887181 MS.gene99801:intron 40.0%
! ACAGAGCTCCTTTTGGATAT+TGG + chr2.3:14889952-14889971 MS.gene99801:intron 40.0%
! ACGAACATTAAAGGCATGTC+CGG + chr2.3:14889788-14889807 MS.gene99801:intron 40.0%
! ACTTTTGATCCACCAGCTAA+AGG - chr2.3:14888979-14888998 None:intergenic 40.0%
! GATGCTATGGATTACTTGCA+AGG + chr2.3:14887493-14887512 MS.gene99801:CDS 40.0%
! GTTTGGAATCAACTCAAAGC+AGG + chr2.3:14889105-14889124 MS.gene99801:CDS 40.0%
!! AGATGAGTGGACTCTAAAAC+GGG + chr2.3:14887445-14887464 MS.gene99801:intron 40.0%
!! GATTATTTTCATGGGAGTGC+AGG + chr2.3:14891224-14891243 MS.gene99801:CDS 40.0%
!!! GGTTTTTTAGGGTTGTGCTA+AGG - chr2.3:14887098-14887117 None:intergenic 40.0%
!!! TTTTTTTCTCCCAAGTGTCG+AGG - chr2.3:14887755-14887774 None:intergenic 40.0%
AACCCGTGTGGTCTCATAAT+AGG + chr2.3:14886848-14886867 MS.gene99801:intron 45.0%
AACGATGGAACATTTCGAGG+AGG + chr2.3:14890708-14890727 MS.gene99801:CDS 45.0%
AATCGCTCGCGAAAATCTGA+CGG - chr2.3:14891425-14891444 None:intergenic 45.0%
AATGTAACCACATCGACGTG+AGG - chr2.3:14890455-14890474 None:intergenic 45.0%
ACAACAGCTAGATTAGGCCA+TGG + chr2.3:14891035-14891054 MS.gene99801:CDS 45.0%
ACAGGAAACCGAATGAACGA+TGG + chr2.3:14890693-14890712 MS.gene99801:CDS 45.0%
ACTTATGTGGCACACATGGT+TGG - chr2.3:14888266-14888285 None:intergenic 45.0%
AGAGGATCAAATCTTCCAGG+AGG - chr2.3:14888676-14888695 None:intergenic 45.0%
AGCTATGTAACACCTAGCCA+TGG - chr2.3:14889314-14889333 None:intergenic 45.0%
AGGGTTTGAAGGAATTCTGG+TGG - chr2.3:14890085-14890104 None:intergenic 45.0%
CAAGAGATAATCCGAACCGA+AGG + chr2.3:14890819-14890838 MS.gene99801:CDS 45.0%
CACCTATTATGAGACCACAC+GGG - chr2.3:14886853-14886872 None:intergenic 45.0%
CAGTATCTGACACGAACACA+TGG + chr2.3:14889825-14889844 MS.gene99801:intron 45.0%
CCATCTTCATCAGGGTTTGA+AGG - chr2.3:14890096-14890115 None:intergenic 45.0%
CCTTCAAACCCTGATGAAGA+TGG + chr2.3:14890093-14890112 MS.gene99801:CDS 45.0%
CTGCTCTTAATCCTTCGGTT+CGG - chr2.3:14890833-14890852 None:intergenic 45.0%
CTTCCAAGTGTCTTGAGGAT+CGG + chr2.3:14887219-14887238 MS.gene99801:intron 45.0%
GAACAGCTTCAAGAAGCTTG+AGG - chr2.3:14890668-14890687 None:intergenic 45.0%
GAAGAAGATCGATCACTCAC+TGG - chr2.3:14889137-14889156 None:intergenic 45.0%
GAAGATCATTACCGCGAACT+CGG + chr2.3:14890930-14890949 MS.gene99801:CDS 45.0%
GCACCTATTATGAGACCACA+CGG - chr2.3:14886854-14886873 None:intergenic 45.0%
GCATCTCTCACATGACAAAC+TGG - chr2.3:14886947-14886966 None:intergenic 45.0%
GGGTTTGAAGGAATTCTGGT+GGG - chr2.3:14890084-14890103 None:intergenic 45.0%
GTTCGTGATGCACTACTTGA+AGG + chr2.3:14889546-14889565 MS.gene99801:CDS 45.0%
TACTGACACATATCGGACAC+CGG - chr2.3:14889810-14889829 None:intergenic 45.0%
TCAGCCGTAAATGCAAAGGT+CGG + chr2.3:14888311-14888330 MS.gene99801:intron 45.0%
TCATCCAATAGTCCAGATGC+AGG - chr2.3:14886535-14886554 None:intergenic 45.0%
TCATTCCTTCATCTCGTTCC+AGG + chr2.3:14890608-14890627 MS.gene99801:intron 45.0%
TCTATGATAGGTCAGCTCAG+TGG - chr2.3:14889255-14889274 None:intergenic 45.0%
TGACGTTAGACAACAAGCAC+AGG - chr2.3:14890423-14890442 None:intergenic 45.0%
TGATCCTGCATCTGGACTAT+TGG + chr2.3:14886528-14886547 MS.gene99801:CDS 45.0%
TGCATCTGGACTATTGGATG+AGG + chr2.3:14886534-14886553 MS.gene99801:CDS 45.0%
TGTTTCCAGCAGTGGTAGAT+AGG + chr2.3:14891444-14891463 MS.gene99801:CDS 45.0%
! ATGGCTCTTGTGAAGAGTAC+TGG + chr2.3:14891200-14891219 MS.gene99801:CDS 45.0%
! GGAGGTTTCAGGTCAAATGA+AGG - chr2.3:14888613-14888632 None:intergenic 45.0%
! GGGTTTTACGAGACCGTTAA+GGG + chr2.3:14891119-14891138 MS.gene99801:CDS 45.0%
! GTGCTACTAGGTGATTCCTT+TGG - chr2.3:14887569-14887588 None:intergenic 45.0%
! TGATCGGTTCCTGAAATCTC+TGG + chr2.3:14890183-14890202 MS.gene99801:CDS 45.0%
! TGATGGTGCAACACTCTCTA+GGG + chr2.3:14888214-14888233 MS.gene99801:intron 45.0%
!! AAGGCTGTTGTTGGTTCAGA+AGG + chr2.3:14889006-14889025 MS.gene99801:CDS 45.0%
!! ATGTTGGTGCCATCTTCATC+AGG - chr2.3:14890105-14890124 None:intergenic 45.0%
!! CTAAAGGTCTAGGACCCTTT+TGG - chr2.3:14888963-14888982 None:intergenic 45.0%
!! GTTGTTGGTTCAGAAGGTGA+AGG + chr2.3:14889012-14889031 MS.gene99801:CDS 45.0%
!! TGTTGGTGCCATCTTCATCA+GGG - chr2.3:14890104-14890123 None:intergenic 45.0%
!! TTGATGGTGCAACACTCTCT+AGG + chr2.3:14888213-14888232 MS.gene99801:intron 45.0%
AAGGGTCCTAGACCTTTAGC+TGG + chr2.3:14888964-14888983 MS.gene99801:CDS 50.0%
ACTCTCCTATCTACCACTGC+TGG - chr2.3:14891452-14891471 None:intergenic 50.0%
AGCAACCTGGAACGAGATGA+AGG - chr2.3:14890616-14890635 None:intergenic 50.0%
AGCAGTGGTAGATAGGAGAG+TGG + chr2.3:14891451-14891470 MS.gene99801:CDS 50.0%
ATACCATTTCCTGCCCTACC+AGG - chr2.3:14888637-14888656 None:intergenic 50.0%
CAACTTGAAGACCGAGTTCG+CGG - chr2.3:14890944-14890963 None:intergenic 50.0%
CAGCCGTAAATGCAAAGGTC+GGG + chr2.3:14888312-14888331 MS.gene99801:intron 50.0%
CATGTTTCGCCTCGACACTT+GGG + chr2.3:14887743-14887762 MS.gene99801:CDS 50.0%
CTAGGCGTTTCTATTCCAGG+AGG - chr2.3:14888763-14888782 None:intergenic 50.0%
CTCGTTCCAGGTTGCTAGTA+AGG + chr2.3:14890620-14890639 MS.gene99801:intron 50.0%
CTCTTGCTCATGCTGAGAAG+TGG - chr2.3:14887947-14887966 None:intergenic 50.0%
CTGCTAGGCGTTTCTATTCC+AGG - chr2.3:14888766-14888785 None:intergenic 50.0%
CTTACACCACTCTTAGGAGG+CGG - chr2.3:14888922-14888941 None:intergenic 50.0%
CTTCCAGGAGGAGGTTTCAA+AGG - chr2.3:14888664-14888683 None:intergenic 50.0%
GAAGATGGCACCAACATCAG+AGG + chr2.3:14890108-14890127 MS.gene99801:CDS 50.0%
GACTTCAGGCAGAGATGCTA+TGG + chr2.3:14887480-14887499 MS.gene99801:intron 50.0%
GATCCACCAGCTAAAGGTCT+AGG - chr2.3:14888973-14888992 None:intergenic 50.0%
GATTTCAGGAACCGATCAGC+CGG - chr2.3:14890181-14890200 None:intergenic 50.0%
GCAGCAGCATTAGATGCTGA+TGG + chr2.3:14891002-14891021 MS.gene99801:CDS 50.0%
GCTCTTACACCACTCTTAGG+AGG - chr2.3:14888925-14888944 None:intergenic 50.0%
GGAATAGAAACGCCTAGCAG+TGG + chr2.3:14888766-14888785 MS.gene99801:CDS 50.0%
GGACCACCATTTCCAGGTTT+CGG - chr2.3:14888847-14888866 None:intergenic 50.0%
GGAGCTCTTACACCACTCTT+AGG - chr2.3:14888928-14888947 None:intergenic 50.0%
GGAGTGCAGGAAGAGATGAA+GGG + chr2.3:14891237-14891256 MS.gene99801:CDS 50.0%
GGATCAAATCTTCCAGGAGG+AGG - chr2.3:14888673-14888692 None:intergenic 50.0%
GTTTCTATTCCAGGAGGTGG+AGG - chr2.3:14888757-14888776 None:intergenic 50.0%
TCATGTTTCGCCTCGACACT+TGG + chr2.3:14887742-14887761 MS.gene99801:CDS 50.0%
TCGGGCTGCTCTTAATCCTT+CGG - chr2.3:14890838-14890857 None:intergenic 50.0%
TTGTCTAGTCCTGGACGTGA+TGG - chr2.3:14886992-14887011 None:intergenic 50.0%
TTTGACCTGAAACCTCCACC+TGG + chr2.3:14888616-14888635 MS.gene99801:CDS 50.0%
! AGTGGTGGTCTTGCTCAACT+TGG + chr2.3:14890154-14890173 MS.gene99801:CDS 50.0%
! CTAGGACCCTTTTGGCCAAA+TGG - chr2.3:14888955-14888974 None:intergenic 50.0%
! GGGGTTTTACGAGACCGTTA+AGG + chr2.3:14891118-14891137 MS.gene99801:CDS 50.0%
! TATTTGGAGTGCAACCCGTG+TGG + chr2.3:14886836-14886855 MS.gene99801:intron 50.0%
! TGGTCTTGCTCAACTTGGTC+CGG + chr2.3:14890159-14890178 MS.gene99801:CDS 50.0%
!!! GTGGCACACATGGTTGGTTT+TGG - chr2.3:14888260-14888279 None:intergenic 50.0%
ACCTGAAACCTCCACCTGGT+AGG + chr2.3:14888620-14888639 MS.gene99801:CDS 55.0%
ACGACATCCTCACGTCGATG+TGG + chr2.3:14890445-14890464 MS.gene99801:intron 55.0%
AGGAGGCGGAGGAGGATTAA+CGG - chr2.3:14888737-14888756 None:intergenic 55.0%
AGTGTCTTGAGGATCGGCAG+AGG + chr2.3:14887225-14887244 MS.gene99801:intron 55.0%
CCACCACCGAAACCTGGAAA+TGG + chr2.3:14888838-14888857 MS.gene99801:CDS 55.0%
CCACCATTTCCAGGTTTCGG+TGG - chr2.3:14888844-14888863 None:intergenic 55.0%
CCACCGAAACCTGGAAATGG+TGG + chr2.3:14888841-14888860 MS.gene99801:CDS 55.0%
CCAGGAGGAGGTTTCAAAGG+TGG - chr2.3:14888661-14888680 None:intergenic 55.0%
CCATTTCCAGGTTTCGGTGG+TGG - chr2.3:14888841-14888860 None:intergenic 55.0%
CCTCCGCCATTTGGCCAAAA+GGG + chr2.3:14888946-14888965 MS.gene99801:CDS 55.0%
CCTGAAACCTCCACCTGGTA+GGG + chr2.3:14888621-14888640 MS.gene99801:CDS 55.0%
CGAGCGATTGTTTCCAGCAG+TGG + chr2.3:14891436-14891455 MS.gene99801:CDS 55.0%
CTCAACTTGGTCCGGCTGAT+CGG + chr2.3:14890167-14890186 MS.gene99801:CDS 55.0%
CTGCCGATCCTCAAGACACT+TGG - chr2.3:14887225-14887244 None:intergenic 55.0%
GGAGGAATGACACCACTGCT+AGG - chr2.3:14888781-14888800 None:intergenic 55.0%
GGCGTTTCTATTCCAGGAGG+TGG - chr2.3:14888760-14888779 None:intergenic 55.0%
GGCTTAGGACCACCATTTCC+AGG - chr2.3:14888853-14888872 None:intergenic 55.0%
GGTCCTAGACCTTTAGCTGG+TGG + chr2.3:14888967-14888986 MS.gene99801:CDS 55.0%
GTAAGAGCTCCTCCGCCATT+TGG + chr2.3:14888937-14888956 MS.gene99801:CDS 55.0%
TCACACACACCATCACGTCC+AGG + chr2.3:14886980-14886999 MS.gene99801:intron 55.0%
TCCTCCGCCATTTGGCCAAA+AGG + chr2.3:14888945-14888964 MS.gene99801:CDS 55.0%
TCTATTCCAGGAGGTGGAGG+AGG - chr2.3:14888754-14888773 None:intergenic 55.0%
! AGGTGTGAGGGGGTGTATGA+TGG - chr2.3:14886807-14886826 None:intergenic 55.0%
! GGACCCTTTTGGCCAAATGG+CGG - chr2.3:14888952-14888971 None:intergenic 55.0%
! GGCACACACAGAGCTCCTTT+TGG + chr2.3:14889945-14889964 MS.gene99801:intron 55.0%
! GGGAGTGCAGGAAGAGATGA+AGG + chr2.3:14891236-14891255 MS.gene99801:CDS 55.0%
! GGTGTGAGGGGGTGTATGAT+GGG - chr2.3:14886806-14886825 None:intergenic 55.0%
! TGGTGCAACACTCTCTAGGG+AGG + chr2.3:14888217-14888236 MS.gene99801:intron 55.0%
! TTTCCAGGTTTCGGTGGTGG+AGG - chr2.3:14888838-14888857 None:intergenic 55.0%
!! CCACCTTTGAAACCTCCTCC+TGG + chr2.3:14888658-14888677 MS.gene99801:CDS 55.0%
!! GGGTTTTGTCGAGCATGCTG+AGG + chr2.3:14891139-14891158 MS.gene99801:CDS 55.0%
AAACCTCCACCTGGTAGGGC+AGG + chr2.3:14888625-14888644 MS.gene99801:CDS 60.0%
ACACCACTCTTAGGAGGCGG+TGG - chr2.3:14888919-14888938 None:intergenic 60.0%
ATTCCAGGAGGTGGAGGAGG+CGG - chr2.3:14888751-14888770 None:intergenic 60.0%
CCACCTGGTAGGGCAGGAAA+TGG + chr2.3:14888631-14888650 MS.gene99801:CDS 60.0%
CCATTTCCTGCCCTACCAGG+TGG - chr2.3:14888634-14888653 None:intergenic 60.0%
CCCTACCAGGTGGAGGTTTC+AGG - chr2.3:14888624-14888643 None:intergenic 60.0%
CGCTCGCGAAAATCTGACGG+CGG - chr2.3:14891422-14891441 None:intergenic 60.0%
GGCGGTGGACGATGAGTTTC+TGG - chr2.3:14891404-14891423 None:intergenic 60.0%
TCCACCACCACCAGCGAAAC+CGG + chr2.3:14888879-14888898 MS.gene99801:CDS 60.0%
TCGCGAAAATCTGACGGCGG+TGG - chr2.3:14891419-14891438 None:intergenic 60.0%
TTTCCTGCCCTACCAGGTGG+AGG - chr2.3:14888631-14888650 None:intergenic 60.0%
! CCCTTTTGGCCAAATGGCGG+AGG - chr2.3:14888949-14888968 None:intergenic 60.0%
CCACCACCACCAGCGAAACC+GGG + chr2.3:14888880-14888899 MS.gene99801:CDS 65.0%
CCACCACCGCCTCCTAAGAG+TGG + chr2.3:14888913-14888932 MS.gene99801:CDS 65.0%
CCACCTCCACCACCGAAACC+TGG + chr2.3:14888832-14888851 MS.gene99801:CDS 65.0%
CCACTCTTAGGAGGCGGTGG+TGG - chr2.3:14888916-14888935 None:intergenic 65.0%
GCACCGAAGCCTAGTGGTGG+CGG + chr2.3:14888802-14888821 MS.gene99801:CDS 65.0%
GCCACCACTAGGCTTCGGTG+CGG - chr2.3:14888803-14888822 None:intergenic 65.0%
GGACCGCCACCACTAGGCTT+CGG - chr2.3:14888808-14888827 None:intergenic 65.0%
! CCACCACTAGGCTTCGGTGC+GGG - chr2.3:14888802-14888821 None:intergenic 65.0%
!! CCAGGTTTCGGTGGTGGAGG+TGG - chr2.3:14888835-14888854 None:intergenic 65.0%
!! GGTGGTGGAGGAGGAGGCTT+AGG - chr2.3:14888868-14888887 None:intergenic 65.0%
!! GGTTTCGCTGGTGGTGGTGG+AGG - chr2.3:14888880-14888899 None:intergenic 65.0%
!! GGTTTCGGTGGTGGAGGTGG+AGG - chr2.3:14888832-14888851 None:intergenic 65.0%
!! TTAGGAGGCGGTGGTGGACG+AGG - chr2.3:14888910-14888929 None:intergenic 65.0%
!! TTCGCTGGTGGTGGTGGAGG+AGG - chr2.3:14888877-14888896 None:intergenic 65.0%
!! TTCGGTGGTGGAGGTGGAGG+AGG - chr2.3:14888829-14888848 None:intergenic 65.0%
CCACCACCAGCGAAACCGGG+TGG + chr2.3:14888883-14888902 MS.gene99801:CDS 70.0%
CCACCCGGTTTCGCTGGTGG+TGG - chr2.3:14888886-14888905 None:intergenic 70.0%
CCCGCACCGAAGCCTAGTGG+TGG + chr2.3:14888799-14888818 MS.gene99801:CDS 70.0%
CCTCCCGCACCGAAGCCTAG+TGG + chr2.3:14888796-14888815 MS.gene99801:CDS 70.0%
CGAGGACCACCCGGTTTCGC+TGG - chr2.3:14888892-14888911 None:intergenic 70.0%
GGACCACCCGGTTTCGCTGG+TGG - chr2.3:14888889-14888908 None:intergenic 70.0%
GGAGGAGGACCGCCACCACT+AGG - chr2.3:14888814-14888833 None:intergenic 70.0%
! CCACTAGGCTTCGGTGCGGG+AGG - chr2.3:14888799-14888818 None:intergenic 70.0%
!! CCCGGTTTCGCTGGTGGTGG+TGG - chr2.3:14888883-14888902 None:intergenic 70.0%
!! GCTGGTGGTGGTGGAGGAGG+AGG - chr2.3:14888874-14888893 None:intergenic 70.0%
!! GGTGGTGGACGAGGACCACC+CGG - chr2.3:14888901-14888920 None:intergenic 70.0%
CCAGGAGGTGGAGGAGGCGG+AGG - chr2.3:14888748-14888767 None:intergenic 75.0%
CCTCCGCCTCCTCCACCTCC+TGG + chr2.3:14888745-14888764 MS.gene99801:CDS 75.0%
GGAGGTGGAGGAGGCGGAGG+AGG - chr2.3:14888745-14888764 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 14886397 14891505 14886397 ID=MS.gene99801
chr2.3 mRNA 14886397 14891505 14886397 ID=MS.gene99801.t1;Parent=MS.gene99801
chr2.3 exon 14886397 14886561 14886397 ID=MS.gene99801.t1.exon1;Parent=MS.gene99801.t1
chr2.3 CDS 14886397 14886561 14886397 ID=cds.MS.gene99801.t1;Parent=MS.gene99801.t1
chr2.3 exon 14887488 14887980 14887488 ID=MS.gene99801.t1.exon2;Parent=MS.gene99801.t1
chr2.3 CDS 14887488 14887980 14887488 ID=cds.MS.gene99801.t1;Parent=MS.gene99801.t1
chr2.3 exon 14888488 14889136 14888488 ID=MS.gene99801.t1.exon3;Parent=MS.gene99801.t1
chr2.3 CDS 14888488 14889136 14888488 ID=cds.MS.gene99801.t1;Parent=MS.gene99801.t1
chr2.3 exon 14889365 14889567 14889365 ID=MS.gene99801.t1.exon4;Parent=MS.gene99801.t1
chr2.3 CDS 14889365 14889567 14889365 ID=cds.MS.gene99801.t1;Parent=MS.gene99801.t1
chr2.3 exon 14890071 14890306 14890071 ID=MS.gene99801.t1.exon5;Parent=MS.gene99801.t1
chr2.3 CDS 14890071 14890306 14890071 ID=cds.MS.gene99801.t1;Parent=MS.gene99801.t1
chr2.3 exon 14890630 14891505 14890630 ID=MS.gene99801.t1.exon6;Parent=MS.gene99801.t1
chr2.3 CDS 14890630 14891505 14890630 ID=cds.MS.gene99801.t1;Parent=MS.gene99801.t1
Gene Sequence

>MS.gene99801

ATGGTAATAATTCAACAGTATATGGGTGTCATAAAGTGTACTTTTTGCATTGTTTTGGTTCTGAACATTGTAGCAGCTATAAGCATTGAAGAACACAAGGAAACAGATGAAGAATTCATTACCCAACTATTTGATCCTGCATCTGGACTATTGGATGAGGATACGGTGAGACTCACTTCACTAGTTATTTCCATTTACATAGCCTTTTAAGTTCCAATACTTTCATTATTTTAACACCCTCAAACAAATATTTGAGGAAAATTTAAGTGAACATGACGTAGTAGCATACATGTGATACTAAACTTGCACGATACCGTCTTGTTTGACACTCTTTCTCTTAGAAGTTATGTCAAGTCTAACTCAGCCCTACAAAATCAGCTTGTAAGATGAAGGGAATCTCTCATATCCCATCATACACCCCCTCACACCTATAACATAATATTTGGAGTGCAACCCGTGTGGTCTCATAATAGGTGCCCAAATGGATCTTAGTTAGGTTCCAATAATATCTTAAAATTTGGGTTGGACTTAATCCAACCATACAAAACCAGTTTGTCATGTGAGAGATGCCTCTTACATCTCATCACACACACCATCACGTCCAGGACTAGACAATTGAAGTGTGATATGTGTGATATGATATTAGGTGGTCCAATATATTTTGAATAGGCTCTGTACCATCTTAAAATTCGGATGATCCTTAGCACAACCCTAAAAAACCAACTTGTAAGGTGAGAGATGTCTCTTATATAATGTGGGAATATAACACTTTATATGGCTGGCTAGGGTTTGTGCTCTTTTCCATTAGTTTCAAAATCTATTCTTCCAAGTGTCTTGAGGATCGGCAGAGGTCATATAATTGCATATGGCTTGGTTTTGTTATGTACTTTCTGTTCTGCTCTGTCAAATTAAGCACTTAATTGATCAAGAAAGATTTTGTGATTTAAGAATATATTTATGCTTCTACTTCAACCAGATTTCAAATGTGAAGTTCAATAAACTTCCACATGTAATTATTGTTAAAGTGACTTATTACCAACCATTTCTTAGATGAGTGGACTCTAAAACGGGTTATAGTTTTATGACTTCAGGCAGAGATGCTATGGATTACTTGCAAGGAAGCTTTGATTCATTTAAGGAAAGATATTGGAGATCTTGGCTTATGCATACCAAAGGAATCACCTAGTAGCACCAATGAAATTAGCTCAGAAATCAGATCAATATCAAGAAAAGACATACAAAAATTGATTAGTACTTGCAATCCACATTTGAAACAAAACTTTCTTAACTGTTTGAGAAAAAACGATGCTTATGTGGGATCGGTTTCATCCAGAAGATATCTACGTCATGTTTCGCCTCGACACTTGGGAGAAAAAAAAGACAAGAAAAAGAAGAAGTCGAAAAAAGACAAGAGTAGTGATCACAAGAAAAATGTTACGCATGCCATAGCTATAACTGCATTGGTGACATTTATATTTGCAGCATTTCTCTTTTTATGTTGTTGTAGATGTTGTGGAAGTGGTAGAGTTAGACAAACTGATGAAAGGCCACTTCTCAGCATGAGCAAGAGTGATTACTCTGTTGGTACATAACAAAAAAATTCATTCTCTCACAAGTAACACCTTTTTAATGCTATGTTATAGGGTTAAATGCAATTTCAGTCTCTTCGATTTTTCGCATTCACAATTTCGGTTCCCTGTTTCTAAATCCACGATTTTAGTCCCTCGATTTTAAAAGTGATTGACTTTTCCCCCAGTTATACATTTTGAGACTGAATTTCGATGGTGACGAGTGAGATACTTATGTGGCTACATGGTTGATGGTGCAACACTCTCTAGGGAGGTTCTTCAAATAGGGTGACCAAAACCAACCATGTGTGCCACATAAGTTACTCACTTGCAATGTAATAAAAAATCAGCCGTAAATGCAAAGGTCGGGAAAATGTCACATATTTTAAAATTTGAGGAATCAAATTTGTGGATTTAAAAATTGAGGGATCAGAAAAATAGGGCGACTGAAATTGCAATTAAGCCTATGATGATGATGATGATATACTAGTCTTAACATGATGTACTTGAATCTTAATTACAGGTTCTTCTTCAAATAATAACCCTTCGAAAAATTCACTAAATGAGGAGAAACATGGTGTTCAATCAATAAGTAATGCTTTTGTTGATGAAAAAAAGAATGTAATGCAAGAAGATGCTCCAAGACCTTCATTTGACCTGAAACCTCCACCTGGTAGGGCAGGAAATGGTATTCCACCTTTGAAACCTCCTCCTGGAAGATTTGATCCTCTTTCAAATGAACCACAGTCAGTTAAGACTTCTGATTTTTCCGTTAATCCTCCTCCGCCTCCTCCACCTCCTGGAATAGAAACGCCTAGCAGTGGTGTCATTCCTCCCGCACCGAAGCCTAGTGGTGGCGGTCCTCCTCCACCTCCACCACCGAAACCTGGAAATGGTGGTCCTAAGCCTCCTCCTCCACCACCACCAGCGAAACCGGGTGGTCCTCGTCCACCACCGCCTCCTAAGAGTGGTGTAAGAGCTCCTCCGCCATTTGGCCAAAAGGGTCCTAGACCTTTAGCTGGTGGATCAAAAGTTCAAGAAAAGGCTGTTGTTGGTTCAGAAGGTGAAGGTGATAGTCATAAAACTAAGTTAAAGCCTTTTTTTTGGGACAAGGTTCAAGCAAACTCAGATCAAACTATGGTTTGGAATCAACTCAAAGCAGGATCGTTCCAGTGAGTGATCGATCTTCTTCTTCCTTTTTAATTAAAATAGTACTAATGATCATTTTACAACTGTTTACGAGGAAATTTCAACTCTACCCCTTGATATTATAATGTCGAACTCTTACCACTGAGCTGACCTATCATAGACTCGTCCTTCTTTTGATGCAGATGAATAATAATTTACCATGGCTAGGTGTTACATAGCTAATTTTGTTGTTGATGATGAATATGTGACAGGTTTAATGAAGAAATGATGGAATCTCTTTTTGGATATACTCAACAGAATGATAAAATCAAAGGTGGACAGAAGAAAGAGTCTTCCTTACGTGATACACCTCAGTATATCCAAATCATTGACTCAAAGAAAGCACAAAATTTATCAATTCTCTTGCGAGCACTAAATGTGACACTAGAAGAAGTTCGTGATGCACTACTTGAAGGTTTTTTTCTGTTCCATCAATTTTCTTCTAGAAATGCATATAGCTACAAGAAGAAAATAATAATAGTATCATCAGATTCTCTGGTGTGACACTAATAAGTAATTAGGGCTTTAATATGCGAACTTTATGTATCAATAGCCTAGAATTAATTTCATATACTTGCAGTACCAATCAAACTATTTGAAACTAGCATATTTTAGTATGCTAGATTAGTTCTAACACGAACATTAAAGGCATGTCCGGTGTCCGATATGTGTCAGTATCTGACACGAACACATGGTTATATTCAACTGTTCCATTAAATTATTATCAATGACGACTTGTCAGTGTCTAGTGATTGGGTTTGTGCCAATACTTCATACGGATACATTCACTGAGGCACACACAGAGCTCCTTTTGGATATTGGTCAAAATAGCTCCTTACATAGAAATGCAAAACAAATATAGTTTATTGTCACTAGTTCCACTTGTATGATACCTTTGATATGTTTTTGGTTGATCAGGAAATGAGCTCCCACCAGAATTCCTTCAAACCCTGATGAAGATGGCACCAACATCAGAGGAAGAACTAAAGCTTAGACTTTTCAGTGGTGGTCTTGCTCAACTTGGTCCGGCTGATCGGTTCCTGAAATCTCTGGTTGAGATTCCATTTGCTTTTAAACGAATGGAAGCATTGCTTTACATGACTACTCTTCAAGAGGAACTCGCTACAACCCGAGAGTCTTTTGCAACTTTAGAGGTAGGATCTCTAAATTTCATCACTCATTTGATACATTGCTTATACTCTATAGTCTTAATCTTACATGATAGTCATGACTGCTAAGCACCAACACTTCAGATTGTAACGTGTCTCCTGTGCTTGTTGTCTAACGTCAACACGACATCCTCACGTCGATGTGGTTACATTCAATAAAGACCACTTTTTTACATTATGACCGATGTTTACATGTCAATGTTAGACTACCAATGTTAATGTCAGGTTTATGTGTCTGTGTCCGTCCTTAACTCTTTTTATTTATCAAAATGAAAACCAATTGGATTCATTCCTTCATCTCGTTCCAGGTTGCTAGTAAGGAACTAAGAAACAGTAGACTATTCCTCAAGCTTCTTGAAGCTGTTCTTAAAACAGGAAACCGAATGAACGATGGAACATTTCGAGGAGGTGCACTTGCATTCAAACTTGATACACTACTAAAACTATCTGATGTAAAAGGAGTAGATGGAAAAATCACACTCTTACACTTTGTTGTTCAAGAGATAATCCGAACCGAAGGATTAAGAGCAGCCCGAGTGATAAAAGAGAGTAGTAGTTTCTCTAGTATAAAAACCGAGGACCTTCTTGAAGACATTAATCTTGAATCAGAAGATCATTACCGCGAACTCGGTCTTCAAGTTGTTTCGCGTTTGAGCAGTGAGCTTGAGAATGTGAAGAAAGCAGCAGCATTAGATGCTGATGGTTTAACAGGAACAACAGCTAGATTAGGCCATGGTCTTATAAAAACAAGAGATTTCATAAACAAAGAGATGGCGAACAATTTAGACGGTGATAAGGGGTTTTACGAGACCGTTAAGGGTTTTGTCGAGCATGCTGAGGCTGATGTCACAAATTTGTTAGAAGAAGAGAAGAAAATCATGGCTCTTGTGAAGAGTACTGGTGATTATTTTCATGGGAGTGCAGGAAGAGATGAAGGGTTAAGATTGTTTGTAATAGTACGTGATTTCTTAATAATGTTGGATAAGGTGTGCAAAGAGATTCAAAAAGCACCAAAGAAACCAACACCAAAGAATGTGAAACAAGATAAAGATACTGCTAGTTCTAGAGGTTCATCAAAGCCAGAAACTCATCGTCCACCGCCGTCAGATTTTCGCGAGCGATTGTTTCCAGCAGTGGTAGATAGGAGAGTGGATGATTTTAGTTCAGATGATGACAGTCCATAG
Protein sequence

>MS.gene99801.t1

MVIIQQYMGVIKCTFCIVLVLNIVAAISIEEHKETDEEFITQLFDPASGLLDEDTAEMLWITCKEALIHLRKDIGDLGLCIPKESPSSTNEISSEIRSISRKDIQKLISTCNPHLKQNFLNCLRKNDAYVGSVSSRRYLRHVSPRHLGEKKDKKKKKSKKDKSSDHKKNVTHAIAITALVTFIFAAFLFLCCCRCCGSGRVRQTDERPLLSMSKSDYSVGSSSNNNPSKNSLNEEKHGVQSISNAFVDEKKNVMQEDAPRPSFDLKPPPGRAGNGIPPLKPPPGRFDPLSNEPQSVKTSDFSVNPPPPPPPPGIETPSSGVIPPAPKPSGGGPPPPPPPKPGNGGPKPPPPPPPAKPGGPRPPPPPKSGVRAPPPFGQKGPRPLAGGSKVQEKAVVGSEGEGDSHKTKLKPFFWDKVQANSDQTMVWNQLKAGSFQFNEEMMESLFGYTQQNDKIKGGQKKESSLRDTPQYIQIIDSKKAQNLSILLRALNVTLEEVRDALLEGNELPPEFLQTLMKMAPTSEEELKLRLFSGGLAQLGPADRFLKSLVEIPFAFKRMEALLYMTTLQEELATTRESFATLEVASKELRNSRLFLKLLEAVLKTGNRMNDGTFRGGALAFKLDTLLKLSDVKGVDGKITLLHFVVQEIIRTEGLRAARVIKESSSFSSIKTEDLLEDINLESEDHYRELGLQVVSRLSSELENVKKAAALDADGLTGTTARLGHGLIKTRDFINKEMANNLDGDKGFYETVKGFVEHAEADVTNLLEEEKKIMALVKSTGDYFHGSAGRDEGLRLFVIVRDFLIMLDKVCKEIQKAPKKPTPKNVKQDKDTASSRGSSKPETHRPPPSDFRERLFPAVVDRRVDDFSSDDDSP