Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018318.01.T01 | XP_003604348.4 | 71.025 | 283 | 24 | 3 | 1 | 249 | 1 | 259 | 3.38E-126 | 380 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018318.01.T01 | A0A396I179 | 71.025 | 283 | 24 | 3 | 1 | 249 | 1 | 259 | 1.61e-126 | 380 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047949.01 | MsG0480018318.01 | 0.802770 | 4.792865e-49 | 2.367787e-46 |
| MsG0080047957.01 | MsG0480018318.01 | 0.813233 | 2.839746e-51 | 1.844013e-48 |
| MsG0080048461.01 | MsG0480018318.01 | 0.813492 | 2.490594e-51 | 1.628928e-48 |
| MsG0080048464.01 | MsG0480018318.01 | 0.828383 | 9.271032e-55 | 9.200502e-52 |
| MsG0080048672.01 | MsG0480018318.01 | 0.816823 | 4.533993e-52 | 3.246721e-49 |
| MsG0080048769.01 | MsG0480018318.01 | 0.836375 | 9.708710e-57 | 1.221228e-53 |
| MsG0080048874.01 | MsG0480018318.01 | 0.807230 | 5.594749e-50 | 3.099394e-47 |
| MsG0080048982.01 | MsG0480018318.01 | 0.805488 | 1.302909e-49 | 6.901948e-47 |
| MsG0180000091.01 | MsG0480018318.01 | 0.857997 | 1.114355e-62 | 2.802490e-59 |
| MsG0180000114.01 | MsG0480018318.01 | 0.807055 | 6.093851e-50 | 3.360530e-47 |
| MsG0180000116.01 | MsG0480018318.01 | 0.822571 | 2.205491e-53 | 1.853213e-50 |
| MsG0180000470.01 | MsG0480018318.01 | 0.843002 | 1.830969e-58 | 2.825193e-55 |
| MsG0180000597.01 | MsG0480018318.01 | 0.816053 | 6.743825e-52 | 4.728761e-49 |
| MsG0180000702.01 | MsG0480018318.01 | 0.823017 | 1.736807e-53 | 1.477874e-50 |
| MsG0180000814.01 | MsG0480018318.01 | 0.841403 | 4.854584e-58 | 7.125709e-55 |
| MsG0180001063.01 | MsG0480018318.01 | 0.816408 | 5.617016e-52 | 3.976724e-49 |
| MsG0180001312.01 | MsG0480018318.01 | 0.834886 | 2.311796e-56 | 2.780491e-53 |
| MsG0180001663.01 | MsG0480018318.01 | 0.804928 | 1.706812e-49 | 8.913069e-47 |
| MsG0180001971.01 | MsG0480018318.01 | 0.819482 | 1.134850e-52 | 8.744081e-50 |
| MsG0180002071.01 | MsG0480018318.01 | 0.822798 | 1.953246e-53 | 1.651681e-50 |
| MsG0180002282.01 | MsG0480018318.01 | 0.802805 | 4.713178e-49 | 2.330552e-46 |
| MsG0180002490.01 | MsG0480018318.01 | 0.808112 | 3.634319e-50 | 2.060268e-47 |
| MsG0180002563.01 | MsG0480018318.01 | 0.809999 | 1.433204e-50 | 8.540804e-48 |
| MsG0180002709.01 | MsG0480018318.01 | 0.808143 | 3.579376e-50 | 2.030845e-47 |
| MsG0180002955.01 | MsG0480018318.01 | 0.811477 | 6.866745e-51 | 4.254980e-48 |
| MsG0180003193.01 | MsG0480018318.01 | 0.848343 | 6.512830e-60 | 1.191525e-56 |
| MsG0180003673.01 | MsG0480018318.01 | 0.862626 | 4.435708e-64 | 1.307462e-60 |
| MsG0180003686.01 | MsG0480018318.01 | 0.856370 | 3.367826e-62 | 8.020700e-59 |
| MsG0180003725.01 | MsG0480018318.01 | 0.876359 | 1.486664e-68 | 7.186154e-65 |
| MsG0180003810.01 | MsG0480018318.01 | 0.800526 | 1.382947e-48 | 6.453668e-46 |
| MsG0180004085.01 | MsG0480018318.01 | 0.815851 | 7.479626e-52 | 5.215178e-49 |
| MsG0180004112.01 | MsG0480018318.01 | 0.808139 | 3.586015e-50 | 2.034387e-47 |
| MsG0180004149.01 | MsG0480018318.01 | 0.802115 | 6.537085e-49 | 3.175897e-46 |
| MsG0180004249.01 | MsG0480018318.01 | 0.814321 | 1.635339e-51 | 1.093853e-48 |
| MsG0180004260.01 | MsG0480018318.01 | 0.826428 | 2.727396e-54 | 2.557178e-51 |
| MsG0180004390.01 | MsG0480018318.01 | 0.801250 | 9.837870e-49 | 4.676065e-46 |
| MsG0180004465.01 | MsG0480018318.01 | 0.850203 | 1.976753e-60 | 3.842252e-57 |
| MsG0180004765.01 | MsG0480018318.01 | 0.818643 | 1.761410e-52 | 1.325885e-49 |
| MsG0180004926.01 | MsG0480018318.01 | 0.815023 | 1.142980e-51 | 7.791434e-49 |
| MsG0180004996.01 | MsG0480018318.01 | 0.829912 | 3.947895e-55 | 4.096969e-52 |
| MsG0180005050.01 | MsG0480018318.01 | 0.812615 | 3.877199e-51 | 2.476769e-48 |
| MsG0180005160.01 | MsG0480018318.01 | 0.802411 | 5.681453e-49 | 2.781246e-46 |
| MsG0180005185.01 | MsG0480018318.01 | 0.854057 | 1.586128e-61 | 3.498874e-58 |
| MsG0180005279.01 | MsG0480018318.01 | 0.801270 | 9.746445e-49 | 4.634894e-46 |
| MsG0180005398.01 | MsG0480018318.01 | 0.801329 | 9.478385e-49 | 4.514129e-46 |
| MsG0180005730.01 | MsG0480018318.01 | 0.825429 | 4.709635e-54 | 4.291502e-51 |
| MsG0180005732.01 | MsG0480018318.01 | 0.813580 | 2.382439e-51 | 1.561844e-48 |
| MsG0180005960.01 | MsG0480018318.01 | 0.801562 | 8.490251e-49 | 4.067303e-46 |
| MsG0180006054.01 | MsG0480018318.01 | 0.806270 | 8.923176e-50 | 4.822809e-47 |
| MsG0180006134.01 | MsG0480018318.01 | 0.815078 | 1.111295e-51 | 7.586486e-49 |
| MsG0180006251.01 | MsG0480018318.01 | 0.830884 | 2.283580e-55 | 2.437756e-52 |
| MsG0280006309.01 | MsG0480018318.01 | 0.804772 | 1.840299e-49 | 9.570933e-47 |
| MsG0280006341.01 | MsG0480018318.01 | 0.841186 | 5.534626e-58 | 8.068360e-55 |
| MsG0280006346.01 | MsG0480018318.01 | -0.814189 | 1.749119e-51 | 1.165724e-48 |
| MsG0280010598.01 | MsG0480018318.01 | 0.828109 | 1.079204e-54 | 1.062514e-51 |
| MsG0280010599.01 | MsG0480018318.01 | 0.834732 | 2.528465e-56 | 3.026662e-53 |
| MsG0280010702.01 | MsG0480018318.01 | 0.812574 | 3.959202e-51 | 2.526360e-48 |
| MsG0280010712.01 | MsG0480018318.01 | 0.824751 | 6.812030e-54 | 6.089166e-51 |
| MsG0280010722.01 | MsG0480018318.01 | 0.821980 | 3.026100e-53 | 2.499791e-50 |
| MsG0280010796.01 | MsG0480018318.01 | 0.853135 | 2.919412e-61 | 6.243364e-58 |
| MsG0280010807.01 | MsG0480018318.01 | 0.810816 | 9.549360e-51 | 5.814702e-48 |
| MsG0280010816.01 | MsG0480018318.01 | 0.800170 | 1.634468e-48 | 7.558672e-46 |
| MsG0280010916.01 | MsG0480018318.01 | 0.818592 | 1.809104e-52 | 1.359875e-49 |
| MsG0280010976.01 | MsG0480018318.01 | 0.817171 | 3.786996e-52 | 2.737797e-49 |
| MsG0280011032.01 | MsG0480018318.01 | 0.822632 | 2.134942e-53 | 1.797030e-50 |
| MsG0280011131.01 | MsG0480018318.01 | 0.807983 | 3.871325e-50 | 2.187116e-47 |
| MsG0280011163.01 | MsG0480018318.01 | 0.814225 | 1.717260e-51 | 1.145600e-48 |
| MsG0280011201.01 | MsG0480018318.01 | 0.813018 | 3.165114e-51 | 2.043472e-48 |
| MsG0280011217.01 | MsG0480018318.01 | 0.817959 | 2.516091e-52 | 1.858651e-49 |
| MsG0280011415.01 | MsG0480018318.01 | 0.828645 | 8.014282e-55 | 8.013840e-52 |
| MsG0380011531.01 | MsG0480018318.01 | 0.825039 | 5.825686e-54 | 5.250338e-51 |
| MsG0380011537.01 | MsG0480018318.01 | 0.844787 | 6.088915e-59 | 9.939399e-56 |
| MsG0380011669.01 | MsG0480018318.01 | 0.812309 | 4.523454e-51 | 2.866181e-48 |
| MsG0380011895.01 | MsG0480018318.01 | 0.813763 | 2.171174e-51 | 1.430369e-48 |
| MsG0380012005.01 | MsG0480018318.01 | 0.814989 | 1.163223e-51 | 7.922072e-49 |
| MsG0380012007.01 | MsG0480018318.01 | 0.802173 | 6.362193e-49 | 3.095509e-46 |
| MsG0380012085.01 | MsG0480018318.01 | 0.840613 | 7.824064e-58 | 1.120484e-54 |
| MsG0380012091.01 | MsG0480018318.01 | 0.829826 | 4.142197e-55 | 4.288435e-52 |
| MsG0380012279.01 | MsG0480018318.01 | -0.833493 | 5.165667e-56 | 5.958715e-53 |
| MsG0380012319.01 | MsG0480018318.01 | 0.814714 | 1.338134e-51 | 9.046098e-49 |
| MsG0380012330.01 | MsG0480018318.01 | 0.808720 | 2.695998e-50 | 1.552805e-47 |
| MsG0380012361.01 | MsG0480018318.01 | 0.804507 | 2.089354e-49 | 1.079166e-46 |
| MsG0380012362.01 | MsG0480018318.01 | 0.809487 | 1.847027e-50 | 1.085825e-47 |
| MsG0380012365.01 | MsG0480018318.01 | 0.839500 | 1.526776e-57 | 2.112494e-54 |
| MsG0380012702.01 | MsG0480018318.01 | 0.810130 | 1.343212e-50 | 8.031433e-48 |
| MsG0380012947.01 | MsG0480018318.01 | 0.825526 | 4.467114e-54 | 4.081854e-51 |
| MsG0380013176.01 | MsG0480018318.01 | 0.820681 | 6.033500e-53 | 4.805928e-50 |
| MsG0380013342.01 | MsG0480018318.01 | 0.831533 | 1.581923e-55 | 1.721607e-52 |
| MsG0380013363.01 | MsG0480018318.01 | 0.810744 | 9.897696e-51 | 6.015353e-48 |
| MsG0380013474.01 | MsG0480018318.01 | 0.818648 | 1.756330e-52 | 1.322257e-49 |
| MsG0380014097.01 | MsG0480018318.01 | 0.804689 | 1.914626e-49 | 9.936300e-47 |
| MsG0380014135.01 | MsG0480018318.01 | 0.805908 | 1.063596e-49 | 5.695434e-47 |
| MsG0380014138.01 | MsG0480018318.01 | 0.800541 | 1.373172e-48 | 6.410527e-46 |
| MsG0380014288.01 | MsG0480018318.01 | 0.809773 | 1.603297e-50 | 9.497991e-48 |
| MsG0380014573.01 | MsG0480018318.01 | 0.836439 | 9.350161e-57 | 1.178384e-53 |
| MsG0380014701.01 | MsG0480018318.01 | 0.816971 | 4.200431e-52 | 3.020286e-49 |
| MsG0380014727.01 | MsG0480018318.01 | 0.843189 | 1.632999e-58 | 2.534797e-55 |
| MsG0380014866.01 | MsG0480018318.01 | 0.858962 | 5.744383e-63 | 1.492507e-59 |
| MsG0380015038.01 | MsG0480018318.01 | 0.807032 | 6.160745e-50 | 3.395471e-47 |
| MsG0380015039.01 | MsG0480018318.01 | 0.802736 | 4.869470e-49 | 2.403567e-46 |
| MsG0380015332.01 | MsG0480018318.01 | 0.800040 | 1.736812e-48 | 8.005614e-46 |
| MsG0380015436.01 | MsG0480018318.01 | 0.808238 | 3.415910e-50 | 1.942981e-47 |
| MsG0380015589.01 | MsG0480018318.01 | 0.821838 | 3.262458e-53 | 2.684479e-50 |
| MsG0380015720.01 | MsG0480018318.01 | 0.801204 | 1.005627e-48 | 4.774198e-46 |
| MsG0380015771.01 | MsG0480018318.01 | 0.801963 | 7.026068e-49 | 3.400168e-46 |
| MsG0380015878.01 | MsG0480018318.01 | 0.808504 | 2.998133e-50 | 1.717239e-47 |
| MsG0380015930.01 | MsG0480018318.01 | 0.803535 | 3.328589e-49 | 1.676935e-46 |
| MsG0380016004.01 | MsG0480018318.01 | 0.801398 | 9.173821e-49 | 4.376539e-46 |
| MsG0380016064.01 | MsG0480018318.01 | 0.838683 | 2.485362e-57 | 3.353959e-54 |
| MsG0380016182.01 | MsG0480018318.01 | 0.825682 | 4.104184e-54 | 3.766993e-51 |
| MsG0380016187.01 | MsG0480018318.01 | 0.817739 | 2.820689e-52 | 2.071249e-49 |
| MsG0380016209.01 | MsG0480018318.01 | 0.825716 | 4.026958e-54 | 3.699764e-51 |
| MsG0380016285.01 | MsG0480018318.01 | 0.822121 | 2.806678e-53 | 2.327909e-50 |
| MsG0380016391.01 | MsG0480018318.01 | 0.875775 | 2.362214e-68 | 1.116960e-64 |
| MsG0380016475.01 | MsG0480018318.01 | 0.800214 | 1.600589e-48 | 7.410585e-46 |
| MsG0380016517.01 | MsG0480018318.01 | 0.849879 | 2.435370e-60 | 4.683912e-57 |
| MsG0380016624.01 | MsG0480018318.01 | 0.801468 | 8.877976e-49 | 4.242966e-46 |
| MsG0380016694.01 | MsG0480018318.01 | 0.829872 | 4.036419e-55 | 4.184339e-52 |
| MsG0380016923.01 | MsG0480018318.01 | 0.804579 | 2.018959e-49 | 1.044755e-46 |
| MsG0380017048.01 | MsG0480018318.01 | 0.894117 | 3.331891e-75 | 3.268936e-71 |
| MsG0380017178.01 | MsG0480018318.01 | -0.842922 | 1.923511e-58 | 2.960514e-55 |
| MsG0380017220.01 | MsG0480018318.01 | 0.869681 | 2.579551e-66 | 9.765174e-63 |
| MsG0380017233.01 | MsG0480018318.01 | 0.814630 | 1.396816e-51 | 9.421494e-49 |
| MsG0380017326.01 | MsG0480018318.01 | 0.835931 | 1.258638e-56 | 1.562059e-53 |
| MsG0380017401.01 | MsG0480018318.01 | 0.835636 | 1.495380e-56 | 1.839378e-53 |
| MsG0380017452.01 | MsG0480018318.01 | 0.839754 | 1.311212e-57 | 1.828287e-54 |
| MsG0380017528.01 | MsG0480018318.01 | 0.843419 | 1.417416e-58 | 2.216483e-55 |
| MsG0380017543.01 | MsG0480018318.01 | 0.824996 | 5.962917e-54 | 5.367448e-51 |
| MsG0380017551.01 | MsG0480018318.01 | -0.825603 | 4.284036e-54 | 3.923314e-51 |
| MsG0480018121.01 | MsG0480018318.01 | 0.812706 | 3.705170e-51 | 2.372473e-48 |
| MsG0480018183.01 | MsG0480018318.01 | 0.820864 | 5.475471e-53 | 4.384274e-50 |
| MsG0480018205.01 | MsG0480018318.01 | 0.833318 | 5.711837e-56 | 6.554856e-53 |
| MsG0480018236.01 | MsG0480018318.01 | 0.876249 | 1.623115e-68 | 7.812726e-65 |
| MsG0480018251.01 | MsG0480018318.01 | 0.818376 | 2.024327e-52 | 1.512821e-49 |
| MsG0480018317.01 | MsG0480018318.01 | 0.879018 | 1.754710e-69 | 9.364818e-66 |
| MsG0480018318.01 | MsG0480018402.01 | 0.800594 | 1.339495e-48 | 6.261665e-46 |
| MsG0480018318.01 | MsG0480018778.01 | 0.846006 | 2.847418e-59 | 4.833414e-56 |
| MsG0480018318.01 | MsG0480018872.01 | 0.832750 | 7.908744e-56 | 8.922351e-53 |
| MsG0480018318.01 | MsG0480018883.01 | 0.818490 | 1.907465e-52 | 1.429887e-49 |
| MsG0480018318.01 | MsG0480019035.01 | 0.826421 | 2.737617e-54 | 2.566259e-51 |
| MsG0480018318.01 | MsG0480019335.01 | 0.820080 | 8.284061e-53 | 6.490743e-50 |
| MsG0480018318.01 | MsG0480019434.01 | 0.828375 | 9.310037e-55 | 9.237025e-52 |
| MsG0480018318.01 | MsG0480019435.01 | 0.876408 | 1.430308e-68 | 6.926794e-65 |
| MsG0480018318.01 | MsG0480019442.01 | 0.835069 | 2.079328e-56 | 2.514428e-53 |
| MsG0480018318.01 | MsG0480019562.01 | 0.800460 | 1.426104e-48 | 6.643932e-46 |
| MsG0480018318.01 | MsG0480020024.01 | 0.804085 | 2.558284e-49 | 1.307173e-46 |
| MsG0480018318.01 | MsG0480020322.01 | 0.800149 | 1.650501e-48 | 7.628855e-46 |
| MsG0480018318.01 | MsG0480020323.01 | 0.815163 | 1.064154e-51 | 7.281284e-49 |
| MsG0480018318.01 | MsG0480020465.01 | 0.817125 | 3.877394e-52 | 2.799572e-49 |
| MsG0480018318.01 | MsG0480020505.01 | 0.801887 | 7.282726e-49 | 3.517887e-46 |
| MsG0480018318.01 | MsG0480020887.01 | 0.809316 | 2.010011e-50 | 1.176283e-47 |
| MsG0480018318.01 | MsG0480021021.01 | 0.810558 | 1.086135e-50 | 6.567861e-48 |
| MsG0480018318.01 | MsG0480021280.01 | 0.815762 | 7.830553e-52 | 5.447252e-49 |
| MsG0480018318.01 | MsG0480021426.01 | 0.815364 | 9.602724e-52 | 6.607131e-49 |
| MsG0480018318.01 | MsG0480021501.01 | 0.805864 | 1.086590e-49 | 5.812109e-47 |
| MsG0480018318.01 | MsG0480021534.01 | 0.818283 | 2.125133e-52 | 1.583896e-49 |
| MsG0480018318.01 | MsG0480021784.01 | 0.811147 | 8.096793e-51 | 4.973588e-48 |
| MsG0480018318.01 | MsG0480021869.01 | 0.815148 | 1.072247e-51 | 7.333694e-49 |
| MsG0480018318.01 | MsG0480021917.01 | 0.854579 | 1.120404e-61 | 2.513942e-58 |
| MsG0480018318.01 | MsG0480021918.01 | 0.814961 | 1.180181e-51 | 8.031234e-49 |
| MsG0480018318.01 | MsG0480021927.01 | 0.838656 | 2.526745e-57 | 3.406991e-54 |
| MsG0480018318.01 | MsG0480021948.01 | 0.810735 | 9.942513e-51 | 6.041024e-48 |
| MsG0480018318.01 | MsG0480022029.01 | 0.805645 | 1.207785e-49 | 6.423986e-47 |
| MsG0480018318.01 | MsG0480022068.01 | 0.823949 | 1.051475e-53 | 9.185668e-51 |
| MsG0480018318.01 | MsG0480022145.01 | 0.810092 | 1.369069e-50 | 8.177647e-48 |
| MsG0480018318.01 | MsG0480022169.01 | 0.816405 | 5.623567e-52 | 3.981167e-49 |
| MsG0480018318.01 | MsG0480022178.01 | 0.848564 | 5.655525e-60 | 1.042116e-56 |
| MsG0480018318.01 | MsG0480022198.01 | 0.811508 | 6.759091e-51 | 4.191825e-48 |
| MsG0480018318.01 | MsG0480022259.01 | 0.809277 | 2.049137e-50 | 1.197963e-47 |
| MsG0480018318.01 | MsG0480022262.01 | 0.810275 | 1.249641e-50 | 7.500217e-48 |
| MsG0480018318.01 | MsG0480022361.01 | 0.813782 | 2.150471e-51 | 1.417461e-48 |
| MsG0480018318.01 | MsG0480022615.01 | -0.846662 | 1.886261e-59 | 3.270554e-56 |
| MsG0480018318.01 | MsG0480022624.01 | 0.815032 | 1.137678e-51 | 7.757251e-49 |
| MsG0480018318.01 | MsG0480022827.01 | 0.881127 | 3.106739e-70 | 1.798099e-66 |
| MsG0480018318.01 | MsG0480022916.01 | 0.804680 | 1.923465e-49 | 9.979510e-47 |
| MsG0480018318.01 | MsG0480023045.01 | 0.837399 | 5.318299e-57 | 6.899595e-54 |
| MsG0480018318.01 | MsG0480023248.01 | 0.850758 | 1.380275e-60 | 2.732261e-57 |
| MsG0480018318.01 | MsG0480023251.01 | 0.836262 | 1.037490e-56 | 1.300735e-53 |
| MsG0480018318.01 | MsG0480023354.01 | 0.804484 | 2.112559e-49 | 1.090511e-46 |
| MsG0480018318.01 | MsG0480023488.01 | 0.830869 | 2.303406e-55 | 2.457804e-52 |
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| MsG0480018318.01 | MsG0480023718.01 | 0.811964 | 5.378492e-51 | 3.376096e-48 |
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| MsG0280008030.01 | MsG0480018318.01 | 0.824318 | 8.611827e-54 | 7.601356e-51 |
| MsG0280008073.01 | MsG0480018318.01 | 0.829167 | 5.988532e-55 | 6.080791e-52 |
| MsG0280008112.01 | MsG0480018318.01 | 0.856339 | 3.440230e-62 | 8.184619e-59 |
| MsG0280008113.01 | MsG0480018318.01 | 0.853966 | 1.684529e-61 | 3.704387e-58 |
| MsG0280008363.01 | MsG0480018318.01 | 0.832589 | 8.671256e-56 | 9.735767e-53 |
| MsG0280008615.01 | MsG0480018318.01 | 0.829274 | 5.643050e-55 | 5.748731e-52 |
| MsG0280008648.01 | MsG0480018318.01 | 0.813099 | 3.037963e-51 | 1.965546e-48 |
| MsG0280008738.01 | MsG0480018318.01 | 0.814666 | 1.371732e-51 | 9.260622e-49 |
| MsG0280008765.01 | MsG0480018318.01 | 0.804428 | 2.170818e-49 | 1.118936e-46 |
| MsG0280008894.01 | MsG0480018318.01 | 0.825538 | 4.438316e-54 | 4.056925e-51 |
| MsG0280008970.01 | MsG0480018318.01 | 0.802464 | 5.540639e-49 | 2.715906e-46 |
| MsG0280009024.01 | MsG0480018318.01 | 0.834279 | 3.284894e-56 | 3.879960e-53 |
| MsG0280009054.01 | MsG0480018318.01 | 0.800438 | 1.440979e-48 | 6.709750e-46 |
| MsG0280009533.01 | MsG0480018318.01 | 0.804068 | 2.579856e-49 | 1.317657e-46 |
| MsG0280009646.01 | MsG0480018318.01 | 0.803572 | 3.270619e-49 | 1.649330e-46 |
| MsG0280009668.01 | MsG0480018318.01 | 0.820192 | 7.808622e-53 | 6.136963e-50 |
| MsG0280009739.01 | MsG0480018318.01 | 0.808269 | 3.364899e-50 | 1.915539e-47 |
| MsG0280009754.01 | MsG0480018318.01 | 0.805998 | 1.018244e-49 | 5.465314e-47 |
| MsG0280009813.01 | MsG0480018318.01 | 0.806133 | 9.537194e-50 | 5.136489e-47 |
| MsG0280010349.01 | MsG0480018318.01 | 0.843247 | 1.575709e-58 | 2.450402e-55 |
| MsG0280010350.01 | MsG0480018318.01 | 0.820555 | 6.447234e-53 | 5.117950e-50 |
| MsG0280010443.01 | MsG0480018318.01 | 0.811607 | 6.431999e-51 | 3.999113e-48 |
| MsG0280010517.01 | MsG0480018318.01 | 0.842413 | 2.624829e-58 | 3.977221e-55 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018318.01.T01 | MTR_4g009873 | 72.024 | 168 | 13 | 2 | 1 | 134 | 1 | 168 | 1.46e-75 | 227 |
| MsG0480018318.01.T01 | MTR_4g116170 | 44.211 | 285 | 96 | 6 | 1 | 249 | 1 | 258 | 1.33e-65 | 213 |
| MsG0480018318.01.T01 | MTR_4g009870 | 87.097 | 62 | 8 | 0 | 188 | 249 | 1 | 62 | 8.97e-30 | 114 |
| MsG0480018318.01.T01 | MTR_4g009870 | 87.097 | 62 | 8 | 0 | 188 | 249 | 1 | 62 | 1.32e-29 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018318.01.T01 | AT1G15740 | 49.823 | 283 | 84 | 3 | 1 | 249 | 8 | 266 | 9.15e-75 | 238 |
Find 55 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCACAGTAATTAAGATTTA+AGG | 0.141721 | 4:+3271553 | None:intergenic |
| GCGTCTGATGTCACTGATTT+TGG | 0.168253 | 4:-3271611 | MsG0480018318.01.T01:CDS |
| TTTCTTTAACAGGGTGAAAT+TGG | 0.213329 | 4:-3272681 | MsG0480018318.01.T01:intron |
| CTTCTCTGGTCTTGTTAACT+TGG | 0.285104 | 4:-3269996 | MsG0480018318.01.T01:CDS |
| TCCGATATGAAGCCTTTATC+AGG | 0.299738 | 4:-3269630 | MsG0480018318.01.T01:CDS |
| ATGGATTTACGCTTACAAAA+TGG | 0.306434 | 4:-3272440 | MsG0480018318.01.T01:CDS |
| TAACTTGGTCAAGTTGGATT+TGG | 0.325759 | 4:-3269981 | MsG0480018318.01.T01:CDS |
| CCAGTCCATGATCTGAAATT+TGG | 0.332242 | 4:+3271531 | None:intergenic |
| GAGAGATGTCCTGGGATTCA+TGG | 0.355408 | 4:-3269959 | MsG0480018318.01.T01:CDS |
| ATGCGGGTGTTGATGATTCT+TGG | 0.356326 | 4:-3271685 | MsG0480018318.01.T01:CDS |
| CGCTTCTTGTTGTAAGCAAA+TGG | 0.375086 | 4:+3273377 | None:intergenic |
| GATGGATGTCATCTCATCTC+AGG | 0.377784 | 4:-3271663 | MsG0480018318.01.T01:CDS |
| TTGGATTTGGAGAGATGTCC+TGG | 0.400413 | 4:-3269968 | MsG0480018318.01.T01:CDS |
| TGAGACTTTGACAATCTTGA+AGG | 0.404945 | 4:+3271579 | None:intergenic |
| AGATGCAACAAACCTGATAA+AGG | 0.406288 | 4:+3269618 | None:intergenic |
| TATTTGCCAGGATCTATACT+TGG | 0.424458 | 4:-3271714 | MsG0480018318.01.T01:CDS |
| CAAGGAATGAGTGCCTTCTC+TGG | 0.429753 | 4:-3270010 | MsG0480018318.01.T01:CDS |
| CATAACAAAGACAAAATTGC+AGG | 0.429924 | 4:+3271482 | None:intergenic |
| TGTGACCAAATTTCAGATCA+TGG | 0.438486 | 4:-3271536 | MsG0480018318.01.T01:CDS |
| ACCTGATAAAGGCTTCATAT+CGG | 0.443237 | 4:+3269629 | None:intergenic |
| TCTGGCCTATTGTGATCAAA+AGG | 0.468146 | 4:+3269590 | None:intergenic |
| AGAAAGATCTACCGAGAGTA+AGG | 0.473864 | 4:+3271634 | None:intergenic |
| TCTTGTTAACTTGGTCAAGT+TGG | 0.476241 | 4:-3269987 | MsG0480018318.01.T01:CDS |
| TCAAGGAAATATTGCAAATG+TGG | 0.478014 | 4:-3272503 | MsG0480018318.01.T01:CDS |
| TGCTTACAACAAGAAGCGTT+CGG | 0.478414 | 4:-3273372 | MsG0480018318.01.T01:five_prime_UTR |
| CAAGGAAATATTGCAAATGT+GGG | 0.488242 | 4:-3272502 | MsG0480018318.01.T01:CDS |
| TTTGGTTATTGAATGGATGA+TGG | 0.494307 | 4:-3272643 | MsG0480018318.01.T01:five_prime_UTR |
| CGATGGGTGGTGCGTGTTCG+AGG | 0.511564 | 4:-3272568 | MsG0480018318.01.T01:CDS |
| GCAAATGTGGGAGTTTGAAA+TGG | 0.528018 | 4:-3272490 | MsG0480018318.01.T01:CDS |
| ATTTGCCAGGATCTATACTT+GGG | 0.536030 | 4:-3271713 | MsG0480018318.01.T01:CDS |
| AACTGTTACCGTGACATGAT+CGG | 0.548392 | 4:+3273308 | None:intergenic |
| AATGAAGATGTTCTTACTAG+AGG | 0.549524 | 4:-3272530 | MsG0480018318.01.T01:CDS |
| GTGTTCGAGGAAGCAAGAGC+GGG | 0.549694 | 4:-3272555 | MsG0480018318.01.T01:CDS |
| ATTCTCCCAAGTATAGATCC+TGG | 0.554027 | 4:+3271708 | None:intergenic |
| TGGACAATGTCCGTCACTGT+TGG | 0.557874 | 4:-3272420 | MsG0480018318.01.T01:CDS |
| CAAGTTAACAAGACCAGAGA+AGG | 0.565092 | 4:+3269997 | None:intergenic |
| GGTTATTGAATGGATGATGG+TGG | 0.571252 | 4:-3272640 | MsG0480018318.01.T01:five_prime_UTR |
| TCAGGGTTCATCCTTACTCT+CGG | 0.578819 | 4:-3271645 | MsG0480018318.01.T01:CDS |
| AATGATTCAATATCTGCTCA+AGG | 0.581564 | 4:-3270028 | MsG0480018318.01.T01:CDS |
| CCAAATTTCAGATCATGGAC+TGG | 0.582601 | 4:-3271531 | MsG0480018318.01.T01:CDS |
| CTATACTTGGGAGAATATGC+GGG | 0.584538 | 4:-3271701 | MsG0480018318.01.T01:CDS |
| ATGGATGTCATCTCATCTCA+GGG | 0.587599 | 4:-3271662 | MsG0480018318.01.T01:CDS |
| ACAGTGCCTCCATGAATCCC+AGG | 0.590376 | 4:+3269950 | None:intergenic |
| TGGATTTGGAGAGATGTCCT+GGG | 0.594319 | 4:-3269967 | MsG0480018318.01.T01:CDS |
| TCTATACTTGGGAGAATATG+CGG | 0.596739 | 4:-3271702 | MsG0480018318.01.T01:CDS |
| CGTGTTCGAGGAAGCAAGAG+CGG | 0.602614 | 4:-3272556 | MsG0480018318.01.T01:CDS |
| TGTAAGCGTAAATCCATGGA+CGG | 0.611321 | 4:+3272446 | None:intergenic |
| TGGAATCTCTCAATATGAAG+TGG | 0.616270 | 4:-3269671 | MsG0480018318.01.T01:CDS |
| CAACTTCACCGATCATGTCA+CGG | 0.627426 | 4:-3273316 | MsG0480018318.01.T01:intron |
| CATGGACTGGAGTGTATCAG+TGG | 0.628538 | 4:-3271518 | MsG0480018318.01.T01:CDS |
| AATGTGGGAGTTTGAAATGG+TGG | 0.629760 | 4:-3272487 | MsG0480018318.01.T01:CDS |
| ACACACAAGTCCAACAGTGA+CGG | 0.643962 | 4:+3272410 | None:intergenic |
| GGGTGTTGATGATTCTTGGA+TGG | 0.654279 | 4:-3271681 | MsG0480018318.01.T01:CDS |
| GTGTGTCCAGAAAATAAGTG+AGG | 0.686168 | 4:-3272393 | MsG0480018318.01.T01:intron |
| AGATGTCCTGGGATTCATGG+AGG | 0.711361 | 4:-3269956 | MsG0480018318.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGAAATTAATTTGTAAATTT+TGG | - | Chr4:3270004-3270023 | MsG0480018318.01.T01:CDS | 10.0% |
| !!! | TTAATATTTAATTTTTTTCC+AGG | + | Chr4:3271087-3271106 | None:intergenic | 10.0% |
| !! | ATATCTTATGAAATTGATTA+TGG | + | Chr4:3270248-3270267 | None:intergenic | 15.0% |
| !! | TAAATTAGAACAAAGTTTAA+AGG | + | Chr4:3272634-3272653 | None:intergenic | 15.0% |
| !! | TCAAATATCAAATGTAATAA+AGG | + | Chr4:3271885-3271904 | None:intergenic | 15.0% |
| !! | TGTTAAAATATTTCCAAATT+GGG | + | Chr4:3272479-3272498 | None:intergenic | 15.0% |
| !! | TTAAGAGTTATTATTATGTT+CGG | - | Chr4:3270087-3270106 | MsG0480018318.01.T01:intron | 15.0% |
| !! | TTGTTAAAATATTTCCAAAT+TGG | + | Chr4:3272480-3272499 | None:intergenic | 15.0% |
| !!! | AAAACTTTTTTGTTTACAAA+AGG | + | Chr4:3273150-3273169 | None:intergenic | 15.0% |
| !!! | ATAATCTTTTTTCTTTAACA+GGG | - | Chr4:3270356-3270375 | MsG0480018318.01.T01:intron | 15.0% |
| !!! | ATACCTTTAAAAAAAAATCT+TGG | - | Chr4:3271827-3271846 | MsG0480018318.01.T01:intron | 15.0% |
| !!! | ATTTTAAAGGTATATTATCA+AGG | + | Chr4:3271735-3271754 | None:intergenic | 15.0% |
| !!! | TACTTAATTTTTCAGTAATA+TGG | - | Chr4:3272560-3272579 | MsG0480018318.01.T01:CDS | 15.0% |
| !!! | TATAATCTTTTTTCTTTAAC+AGG | - | Chr4:3270355-3270374 | MsG0480018318.01.T01:intron | 15.0% |
| !!! | TCAGCAAATTTTAAATAATT+TGG | - | Chr4:3270804-3270823 | MsG0480018318.01.T01:intron | 15.0% |
| !!! | TTATGTTACTTTTTTATTCT+CGG | - | Chr4:3269951-3269970 | MsG0480018318.01.T01:CDS | 15.0% |
| !!! | TTTCCAAGATTTTTTTTTAA+AGG | + | Chr4:3271833-3271852 | None:intergenic | 15.0% |
| !! | AAGAAAAATTGTAATAAGAG+TGG | + | Chr4:3269611-3269630 | None:intergenic | 20.0% |
| !! | ATAACTTCAATCAAACTATT+TGG | - | Chr4:3273327-3273346 | MsG0480018318.01.T01:five_prime_UTR | 20.0% |
| !! | CATTATGTTAATTGGATTAA+TGG | + | Chr4:3272760-3272779 | None:intergenic | 20.0% |
| !! | CTGAAAAATTAAGTAGAAAT+AGG | + | Chr4:3272555-3272574 | None:intergenic | 20.0% |
| !! | GAATAAAATATACAACAAAG+AGG | + | Chr4:3271641-3271660 | None:intergenic | 20.0% |
| !! | TATATGTAATGTAATATTCC+AGG | - | Chr4:3272962-3272981 | MsG0480018318.01.T01:intron | 20.0% |
| !! | TTTAGATATTTATCCATTGT+TGG | - | Chr4:3272527-3272546 | MsG0480018318.01.T01:CDS | 20.0% |
| !!! | AGTTATGAAGAAATCAATTT+TGG | + | Chr4:3273313-3273332 | None:intergenic | 20.0% |
| !!! | ATTCATTTTTGGTTATTGAA+TGG | - | Chr4:3270396-3270415 | MsG0480018318.01.T01:intron | 20.0% |
| !!! | GTATGCTAGATTAATTTTAA+AGG | + | Chr4:3271748-3271767 | None:intergenic | 20.0% |
| ! | AAAACTATTTCACCTTACTA+TGG | + | Chr4:3272789-3272808 | None:intergenic | 25.0% |
| ! | AAAGAAAAAAGCTAAAACAC+CGG | + | Chr4:3269816-3269835 | None:intergenic | 25.0% |
| ! | AACAATGCTATGTAACAAAA+AGG | + | Chr4:3272860-3272879 | None:intergenic | 25.0% |
| ! | AATTAACCATCCCAAATAAT+TGG | + | Chr4:3272455-3272474 | None:intergenic | 25.0% |
| ! | ACAATGGTATTTGTGTATTT+AGG | + | Chr4:3272151-3272170 | None:intergenic | 25.0% |
| ! | ATAATGAAATCTCCATAGTA+AGG | - | Chr4:3272774-3272793 | MsG0480018318.01.T01:intron | 25.0% |
| ! | ATCTGCATAAGATTTCAATA+TGG | + | Chr4:3272593-3272612 | None:intergenic | 25.0% |
| ! | ATGTTAATTGGATTAATGGA+TGG | + | Chr4:3272756-3272775 | None:intergenic | 25.0% |
| ! | CTTATTGAATTTGTAGTGTT+TGG | + | Chr4:3271171-3271190 | None:intergenic | 25.0% |
| ! | GGAGATTTCATTATGTTAAT+TGG | + | Chr4:3272768-3272787 | None:intergenic | 25.0% |
| ! | GTAGTGTTTGGTAAAATTAA+TGG | + | Chr4:3271159-3271178 | None:intergenic | 25.0% |
| ! | GTCACAGTAATTAAGATTTA+AGG | + | Chr4:3271496-3271515 | None:intergenic | 25.0% |
| ! | TGTTGTATCACCAATTATTT+GGG | - | Chr4:3272442-3272461 | MsG0480018318.01.T01:CDS | 25.0% |
| ! | TTAAAGGTCATATTTCATCA+AGG | + | Chr4:3272618-3272637 | None:intergenic | 25.0% |
| ! | TTGTTGTATCACCAATTATT+TGG | - | Chr4:3272441-3272460 | MsG0480018318.01.T01:CDS | 25.0% |
| ! | TTTGAAGGTTGTATAATAAC+TGG | + | Chr4:3273207-3273226 | None:intergenic | 25.0% |
| !! | TACTAGAATATTTTGTCGAT+GGG | - | Chr4:3270462-3270481 | MsG0480018318.01.T01:intron | 25.0% |
| !! | TGGTTTCATGTATTCATTTT+TGG | - | Chr4:3270385-3270404 | MsG0480018318.01.T01:intron | 25.0% |
| !! | TGTTAATTGGATTAATGGAT+GGG | + | Chr4:3272755-3272774 | None:intergenic | 25.0% |
| !! | TTACTAGAATATTTTGTCGA+TGG | - | Chr4:3270461-3270480 | MsG0480018318.01.T01:intron | 25.0% |
| !! | TTTTTCCAGGTATTATGATA+GGG | + | Chr4:3271074-3271093 | None:intergenic | 25.0% |
| !!! | ACTATTTGGTTCATATTTTC+AGG | - | Chr4:3273341-3273360 | MsG0480018318.01.T01:five_prime_UTR | 25.0% |
| !!! | TTAGCTTTTTTCTTTCTATG+TGG | - | Chr4:3269821-3269840 | MsG0480018318.01.T01:intron | 25.0% |
| !!! | TTATTTTTCCATTATCACGA+AGG | - | Chr4:3272712-3272731 | MsG0480018318.01.T01:intron | 25.0% |
| !!! | TTTTTTCCAGGTATTATGAT+AGG | + | Chr4:3271075-3271094 | None:intergenic | 25.0% |
| AAAATAGAGAAAACTACGTG+AGG | + | Chr4:3272508-3272527 | None:intergenic | 30.0% | |
| AATGAAGATGTTCTTACTAG+AGG | - | Chr4:3270516-3270535 | MsG0480018318.01.T01:intron | 30.0% | |
| AATGATTCAATATCTGCTCA+AGG | - | Chr4:3273018-3273037 | MsG0480018318.01.T01:intron | 30.0% | |
| ACATTCAATGAATAACATCG+AGG | - | Chr4:3272812-3272831 | MsG0480018318.01.T01:intron | 30.0% | |
| ACCGTCATAATATTCCTAAA+AGG | - | Chr4:3272006-3272025 | MsG0480018318.01.T01:intron | 30.0% | |
| ACTAGGTTTAATCGTATTCT+AGG | + | Chr4:3272267-3272286 | None:intergenic | 30.0% | |
| ATGACAAAAAAAGACTCGTT+TGG | - | Chr4:3270954-3270973 | MsG0480018318.01.T01:intron | 30.0% | |
| ATGGATTTACGCTTACAAAA+TGG | - | Chr4:3270606-3270625 | MsG0480018318.01.T01:intron | 30.0% | |
| ATGGTATTTGTGTATTTAGG+CGG | + | Chr4:3272148-3272167 | None:intergenic | 30.0% | |
| CAAGGAAATATTGCAAATGT+GGG | - | Chr4:3270544-3270563 | MsG0480018318.01.T01:intron | 30.0% | |
| CAAGTACAATATTATGCACT+TGG | - | Chr4:3272304-3272323 | MsG0480018318.01.T01:intron | 30.0% | |
| CACTTGGATTTAGAAGTAAT+TGG | - | Chr4:3272320-3272339 | MsG0480018318.01.T01:intron | 30.0% | |
| CATAACAAAGACAAAATTGC+AGG | + | Chr4:3271567-3271586 | None:intergenic | 30.0% | |
| CATACGATCAATTATGAACT+TGG | - | Chr4:3271267-3271286 | MsG0480018318.01.T01:intron | 30.0% | |
| CTAGGTTTAATCGTATTCTA+GGG | + | Chr4:3272266-3272285 | None:intergenic | 30.0% | |
| CTATCCAGAATTTCATTCTT+CGG | + | Chr4:3272678-3272697 | None:intergenic | 30.0% | |
| TAAAACACCGGAAAAAAATC+AGG | + | Chr4:3269804-3269823 | None:intergenic | 30.0% | |
| TAAATCATATAGGCTCTGTT+TGG | - | Chr4:3270887-3270906 | MsG0480018318.01.T01:intron | 30.0% | |
| TAAGTCATACACTCAAAATG+TGG | + | Chr4:3270918-3270937 | None:intergenic | 30.0% | |
| TCAAGGAAATATTGCAAATG+TGG | - | Chr4:3270543-3270562 | MsG0480018318.01.T01:intron | 30.0% | |
| TCATATATCTTCGATCTAAG+TGG | - | Chr4:3271295-3271314 | MsG0480018318.01.T01:intron | 30.0% | |
| TGAAGTTCATCAAAGAACAT+TGG | + | Chr4:3273178-3273197 | None:intergenic | 30.0% | |
| TGTACTTGCAAAAAACGTAA+GGG | + | Chr4:3272292-3272311 | None:intergenic | 30.0% | |
| TGTCTGAAAAGTAAAGCTTT+GGG | - | Chr4:3273248-3273267 | MsG0480018318.01.T01:intron | 30.0% | |
| TTATGGTTCATCTTACTAAG+AGG | + | Chr4:3270231-3270250 | None:intergenic | 30.0% | |
| TTGTACTTGCAAAAAACGTA+AGG | + | Chr4:3272293-3272312 | None:intergenic | 30.0% | |
| TTGTCTGAAAAGTAAAGCTT+TGG | - | Chr4:3273247-3273266 | MsG0480018318.01.T01:intron | 30.0% | |
| TTTCTTTAACAGGGTGAAAT+TGG | - | Chr4:3270365-3270384 | MsG0480018318.01.T01:intron | 30.0% | |
| TTTGGTTATTGAATGGATGA+TGG | - | Chr4:3270403-3270422 | MsG0480018318.01.T01:intron | 30.0% | |
| ! | ATTTTGTAAGCGTAAATCCA+TGG | + | Chr4:3270607-3270626 | None:intergenic | 30.0% |
| ! | CTGCAATTTTGTCTTTGTTA+TGG | - | Chr4:3271565-3271584 | MsG0480018318.01.T01:CDS | 30.0% |
| ! | GTTTAAATTTGGAGTTTCTG+CGG | - | Chr4:3269925-3269944 | MsG0480018318.01.T01:intron | 30.0% |
| ! | TTCTTACTAGAGGATTTTCA+AGG | - | Chr4:3270526-3270545 | MsG0480018318.01.T01:intron | 30.0% |
| ! | TTTAAATTTGGAGTTTCTGC+GGG | - | Chr4:3269926-3269945 | MsG0480018318.01.T01:intron | 30.0% |
| ! | TTTTCCAGGTATTATGATAG+GGG | + | Chr4:3271073-3271092 | None:intergenic | 30.0% |
| !! | ACAATACCTCACTTATTTTC+TGG | + | Chr4:3270662-3270681 | None:intergenic | 30.0% |
| !! | AGTTTTATCTCTTATTTGCC+AGG | - | Chr4:3271320-3271339 | MsG0480018318.01.T01:intron | 30.0% |
| !! | GCCTTTTAGGAATATTATGA+CGG | + | Chr4:3272010-3272029 | None:intergenic | 30.0% |
| !!! | ATTTTCAGGTCTAACTAAGT+TGG | - | Chr4:3273355-3273374 | MsG0480018318.01.T01:five_prime_UTR | 30.0% |
| !!! | GGATTATCCTGATTTTTTTC+CGG | - | Chr4:3269794-3269813 | MsG0480018318.01.T01:intron | 30.0% |
| !!! | TGTAAATTTTGGAGTCTATG+TGG | - | Chr4:3270015-3270034 | MsG0480018318.01.T01:CDS | 30.0% |
| AAGGCGAAGTGATGAAAATA+TGG | + | Chr4:3271956-3271975 | None:intergenic | 35.0% | |
| AAGTGATGAAAATATGGGAC+TGG | + | Chr4:3271950-3271969 | None:intergenic | 35.0% | |
| AATATACAACAAAGAGGCCA+AGG | + | Chr4:3271635-3271654 | None:intergenic | 35.0% | |
| ACACAAATACCATTGTGCTT+GGG | - | Chr4:3272155-3272174 | MsG0480018318.01.T01:intron | 35.0% | |
| ACCTGATAAAGGCTTCATAT+CGG | + | Chr4:3273420-3273439 | None:intergenic | 35.0% | |
| AGATGCAACAAACCTGATAA+AGG | + | Chr4:3273431-3273450 | None:intergenic | 35.0% | |
| AGGCGAAGTGATGAAAATAT+GGG | + | Chr4:3271955-3271974 | None:intergenic | 35.0% | |
| ATATACAACAAAGAGGCCAA+GGG | + | Chr4:3271634-3271653 | None:intergenic | 35.0% | |
| ATTGATCGTATGACTCTGTT+TGG | + | Chr4:3271259-3271278 | None:intergenic | 35.0% | |
| ATTTGCCAGGATCTATACTT+GGG | - | Chr4:3271333-3271352 | MsG0480018318.01.T01:intron | 35.0% | |
| CAAAAAACGTAAGGGATACT+AGG | + | Chr4:3272284-3272303 | None:intergenic | 35.0% | |
| GGATGGTTAATTTCCCAATT+TGG | - | Chr4:3272463-3272482 | MsG0480018318.01.T01:CDS | 35.0% | |
| GTATCACCAATTATTTGGGA+TGG | - | Chr4:3272446-3272465 | MsG0480018318.01.T01:CDS | 35.0% | |
| TACACAAATACCATTGTGCT+TGG | - | Chr4:3272154-3272173 | MsG0480018318.01.T01:intron | 35.0% | |
| TATTTGCCAGGATCTATACT+TGG | - | Chr4:3271332-3271351 | MsG0480018318.01.T01:intron | 35.0% | |
| TCAATACCTTCCTAAAGACT+TGG | - | Chr4:3271909-3271928 | MsG0480018318.01.T01:intron | 35.0% | |
| TCCTGAATGATCGATCAATT+TGG | - | Chr4:3270323-3270342 | MsG0480018318.01.T01:intron | 35.0% | |
| TCTATACTTGGGAGAATATG+CGG | - | Chr4:3271344-3271363 | MsG0480018318.01.T01:intron | 35.0% | |
| TGAGACTTTGACAATCTTGA+AGG | + | Chr4:3271470-3271489 | None:intergenic | 35.0% | |
| TGGAATCTCTCAATATGAAG+TGG | - | Chr4:3273375-3273394 | MsG0480018318.01.T01:five_prime_UTR | 35.0% | |
| TGGTATTTATAGCCTGCTAT+GGG | + | Chr4:3272202-3272221 | None:intergenic | 35.0% | |
| TGTGACCAAATTTCAGATCA+TGG | - | Chr4:3271510-3271529 | MsG0480018318.01.T01:CDS | 35.0% | |
| TTTACCCCTATCATAATACC+TGG | - | Chr4:3271066-3271085 | MsG0480018318.01.T01:intron | 35.0% | |
| ! | AATATGAAGTGTCTGGACAA+AGG | + | Chr4:3270703-3270722 | None:intergenic | 35.0% |
| ! | AATTGGATTAATGGATGGGT+AGG | + | Chr4:3272751-3272770 | None:intergenic | 35.0% |
| ! | AGACGAAAATATGAAGTGTC+TGG | + | Chr4:3270710-3270729 | None:intergenic | 35.0% |
| ! | CACACAAGCATATCTTTTGA+AGG | + | Chr4:3273222-3273241 | None:intergenic | 35.0% |
| ! | CGGACGTGATATATTGATTA+CGG | + | Chr4:3272658-3272677 | None:intergenic | 35.0% |
| ! | CGGTTTCTAGAAGTTTAGAA+GGG | + | Chr4:3272128-3272147 | None:intergenic | 35.0% |
| ! | GATGAAGTTGATTATGCAGT+TGG | - | Chr4:3270271-3270290 | MsG0480018318.01.T01:intron | 35.0% |
| ! | TAGAATATTTTGTCGATGGG+TGG | - | Chr4:3270465-3270484 | MsG0480018318.01.T01:intron | 35.0% |
| ! | TCTTGTTAACTTGGTCAAGT+TGG | - | Chr4:3273059-3273078 | MsG0480018318.01.T01:intron | 35.0% |
| ! | TTTCTAGAAGTTTAGAAGGG+CGG | + | Chr4:3272125-3272144 | None:intergenic | 35.0% |
| !! | AGTCTTTAGGAAGGTATTGA+CGG | + | Chr4:3271909-3271928 | None:intergenic | 35.0% |
| !! | TAACTTGGTCAAGTTGGATT+TGG | - | Chr4:3273065-3273084 | MsG0480018318.01.T01:intron | 35.0% |
| !! | TCACTTTTCGTTTATGCGTT+TGG | - | Chr4:3269773-3269792 | MsG0480018318.01.T01:intron | 35.0% |
| AACAAAAAGGCTTTGCAGAG+AGG | + | Chr4:3272847-3272866 | None:intergenic | 40.0% | |
| AACTGTTACCGTGACATGAT+CGG | + | Chr4:3269741-3269760 | None:intergenic | 40.0% | |
| ACCATCAGTAAAAGCAACCT+AGG | + | Chr4:3272936-3272955 | None:intergenic | 40.0% | |
| ACGTCCGAAGAATGAAATTC+TGG | - | Chr4:3272671-3272690 | MsG0480018318.01.T01:five_prime_UTR | 40.0% | |
| AGAAAGATCTACCGAGAGTA+AGG | + | Chr4:3271415-3271434 | None:intergenic | 40.0% | |
| AGGATGAGCTTAGCTTATAG+CGG | + | Chr4:3271203-3271222 | None:intergenic | 40.0% | |
| ATCTAGCATACTCATGCTGT+TGG | - | Chr4:3271757-3271776 | MsG0480018318.01.T01:intron | 40.0% | |
| ATGGATGTCATCTCATCTCA+GGG | - | Chr4:3271384-3271403 | MsG0480018318.01.T01:intron | 40.0% | |
| ATTCTCCCAAGTATAGATCC+TGG | + | Chr4:3271341-3271360 | None:intergenic | 40.0% | |
| CAAGTTAACAAGACCAGAGA+AGG | + | Chr4:3273052-3273071 | None:intergenic | 40.0% | |
| CACTGCAATCTTTATTCGAC+AGG | - | Chr4:3270736-3270755 | MsG0480018318.01.T01:intron | 40.0% | |
| CAGAGCCTATATGATTTACC+TGG | + | Chr4:3270885-3270904 | None:intergenic | 40.0% | |
| CCAAATTTCAGATCATGGAC+TGG | - | Chr4:3271515-3271534 | MsG0480018318.01.T01:CDS | 40.0% | |
| CCATCAGTAAAAGCAACCTA+GGG | + | Chr4:3272935-3272954 | None:intergenic | 40.0% | |
| CTATACTTGGGAGAATATGC+GGG | - | Chr4:3271345-3271364 | MsG0480018318.01.T01:intron | 40.0% | |
| GCAAATGTGGGAGTTTGAAA+TGG | - | Chr4:3270556-3270575 | MsG0480018318.01.T01:intron | 40.0% | |
| GCCAAATTGATCGATCATTC+AGG | + | Chr4:3270327-3270346 | None:intergenic | 40.0% | |
| GCTCTCCAGGTAAATCATAT+AGG | - | Chr4:3270877-3270896 | MsG0480018318.01.T01:intron | 40.0% | |
| GTAGAAATAGGTGCCAACAA+TGG | + | Chr4:3272543-3272562 | None:intergenic | 40.0% | |
| GTGGTATTTATAGCCTGCTA+TGG | + | Chr4:3272203-3272222 | None:intergenic | 40.0% | |
| GTGTGTCCAGAAAATAAGTG+AGG | - | Chr4:3270653-3270672 | MsG0480018318.01.T01:intron | 40.0% | |
| TCCGATATGAAGCCTTTATC+AGG | - | Chr4:3273416-3273435 | MsG0480018318.01.T01:five_prime_UTR | 40.0% | |
| TGTAAGCGTAAATCCATGGA+CGG | + | Chr4:3270603-3270622 | None:intergenic | 40.0% | |
| ! | AAAGGCTAAGACCTCTAGAA+AGG | - | Chr4:3272045-3272064 | MsG0480018318.01.T01:intron | 40.0% |
| ! | AATGTGGGAGTTTGAAATGG+TGG | - | Chr4:3270559-3270578 | MsG0480018318.01.T01:intron | 40.0% |
| ! | AGACATTTTCTATGCTGCCA+CGG | - | Chr4:3270773-3270792 | MsG0480018318.01.T01:intron | 40.0% |
| ! | ATCGTTTTCTTATCCGTCCA+TGG | - | Chr4:3270587-3270606 | MsG0480018318.01.T01:intron | 40.0% |
| ! | CCAGTCCATGATCTGAAATT+TGG | + | Chr4:3271518-3271537 | None:intergenic | 40.0% |
| ! | CGCTTCTTGTTGTAAGCAAA+TGG | + | Chr4:3269672-3269691 | None:intergenic | 40.0% |
| ! | GCGGTTTCTAGAAGTTTAGA+AGG | + | Chr4:3272129-3272148 | None:intergenic | 40.0% |
| ! | GCTGATAAGCTAGCTTAAAG+AGG | + | Chr4:3271223-3271242 | None:intergenic | 40.0% |
| ! | GGTTATTGAATGGATGATGG+TGG | - | Chr4:3270406-3270425 | MsG0480018318.01.T01:intron | 40.0% |
| ! | TAAGACCTCTAGAAAGGCTT+AGG | - | Chr4:3272051-3272070 | MsG0480018318.01.T01:intron | 40.0% |
| !! | ATTTGCTGACTTATATCCCG+TGG | + | Chr4:3270793-3270812 | None:intergenic | 40.0% |
| !! | CTTCTCTGGTCTTGTTAACT+TGG | - | Chr4:3273050-3273069 | MsG0480018318.01.T01:intron | 40.0% |
| !! | GCACTGTTCATTTTCAAGGT+TGG | - | Chr4:3273112-3273131 | MsG0480018318.01.T01:intron | 40.0% |
| !! | TGAAAGCACCTTCGTGATAA+TGG | + | Chr4:3272723-3272742 | None:intergenic | 40.0% |
| !! | TGCTTACAACAAGAAGCGTT+CGG | - | Chr4:3269674-3269693 | MsG0480018318.01.T01:CDS | 40.0% |
| ACACACAAGTCCAACAGTGA+CGG | + | Chr4:3270639-3270658 | None:intergenic | 45.0% | |
| ATTTCGAGATTGTGCTCTCC+AGG | - | Chr4:3270864-3270883 | MsG0480018318.01.T01:intron | 45.0% | |
| CAACTTCACCGATCATGTCA+CGG | - | Chr4:3269730-3269749 | MsG0480018318.01.T01:intron | 45.0% | |
| CTTGAGAATGCTCTCAAGAG+TGG | + | Chr4:3272222-3272241 | None:intergenic | 45.0% | |
| CTTGTCAAGTTTGACAGACC+TGG | + | Chr4:3272983-3273002 | None:intergenic | 45.0% | |
| GATGGATGTCATCTCATCTC+AGG | - | Chr4:3271383-3271402 | MsG0480018318.01.T01:intron | 45.0% | |
| TCAGGGTTCATCCTTACTCT+CGG | - | Chr4:3271401-3271420 | MsG0480018318.01.T01:intron | 45.0% | |
| TGACCTTGCCTTGTGAGAAA+AGG | - | Chr4:3272398-3272417 | MsG0480018318.01.T01:CDS | 45.0% | |
| TGGATTTGGAGAGATGTCCT+GGG | - | Chr4:3273079-3273098 | MsG0480018318.01.T01:intron | 45.0% | |
| TTATAGCCTGCTATGGGCTT+GGG | + | Chr4:3272196-3272215 | None:intergenic | 45.0% | |
| TTGCTTGTTCCCAAGCACAA+TGG | + | Chr4:3272167-3272186 | None:intergenic | 45.0% | |
| TTGGATTTGGAGAGATGTCC+TGG | - | Chr4:3273078-3273097 | MsG0480018318.01.T01:intron | 45.0% | |
| TTTATAGCCTGCTATGGGCT+TGG | + | Chr4:3272197-3272216 | None:intergenic | 45.0% | |
| ! | AAGCCTTTTCTCACAAGGCA+AGG | + | Chr4:3272404-3272423 | None:intergenic | 45.0% |
| ! | CAACGAAGCCTTTTCTCACA+AGG | + | Chr4:3272409-3272428 | None:intergenic | 45.0% |
| ! | GACATTTTCTATGCTGCCAC+GGG | - | Chr4:3270774-3270793 | MsG0480018318.01.T01:intron | 45.0% |
| ! | TCTAGAGGTCTTAGCCTTTC+TGG | + | Chr4:3272044-3272063 | None:intergenic | 45.0% |
| ! | TGTCTAGAAGCTTTGTCCCT+AGG | - | Chr4:3272916-3272935 | MsG0480018318.01.T01:intron | 45.0% |
| !! | ATGCGGGTGTTGATGATTCT+TGG | - | Chr4:3271361-3271380 | MsG0480018318.01.T01:intron | 45.0% |
| !! | CACTCTTGAGAGCATTCTCA+AGG | - | Chr4:3272220-3272239 | MsG0480018318.01.T01:intron | 45.0% |
| !! | GGGTGTTGATGATTCTTGGA+TGG | - | Chr4:3271365-3271384 | MsG0480018318.01.T01:intron | 45.0% |
| !!! | CCCTAGGTTGCTTTTACTGA+TGG | - | Chr4:3272932-3272951 | MsG0480018318.01.T01:intron | 45.0% |
| !!! | GCGTCTGATGTCACTGATTT+TGG | - | Chr4:3271435-3271454 | MsG0480018318.01.T01:intron | 45.0% |
| !!! | GGAGGCACTGTTCATTTTCA+AGG | - | Chr4:3273108-3273127 | MsG0480018318.01.T01:intron | 45.0% |
| !! | TTAAAATTAATGTTTAAATT+TGG | - | Chr4:3269914-3269933 | MsG0480018318.01.T01:intron | 5.0% |
| AGATGTCCTGGGATTCATGG+AGG | - | Chr4:3273090-3273109 | MsG0480018318.01.T01:intron | 50.0% | |
| CAAGGAATGAGTGCCTTCTC+TGG | - | Chr4:3273036-3273055 | MsG0480018318.01.T01:intron | 50.0% | |
| GAGAGATGTCCTGGGATTCA+TGG | - | Chr4:3273087-3273106 | MsG0480018318.01.T01:intron | 50.0% | |
| GCACTTGTGTTTCAGTCCCT+TGG | - | Chr4:3271615-3271634 | MsG0480018318.01.T01:CDS | 50.0% | |
| TAAGCACGAGTCTTGGGACA+AGG | + | Chr4:3271975-3271994 | None:intergenic | 50.0% | |
| TGGACAATGTCCGTCACTGT+TGG | - | Chr4:3270626-3270645 | MsG0480018318.01.T01:intron | 50.0% | |
| TGTCCCAAGACTCGTGCTTA+GGG | - | Chr4:3271975-3271994 | MsG0480018318.01.T01:intron | 50.0% | |
| TTGTCCCAAGACTCGTGCTT+AGG | - | Chr4:3271974-3271993 | MsG0480018318.01.T01:intron | 50.0% | |
| ! | AGAGGTCTTAGCCTTTCTGG+AGG | + | Chr4:3272041-3272060 | None:intergenic | 50.0% |
| ! | AGGGCACCAAGTCTTTAGGA+AGG | + | Chr4:3271918-3271937 | None:intergenic | 50.0% |
| ! | GAGGTCTTAGCCTTTCTGGA+GGG | + | Chr4:3272040-3272059 | None:intergenic | 50.0% |
| ! | GGAGGGCTTCTATGCCTTTT+AGG | + | Chr4:3272023-3272042 | None:intergenic | 50.0% |
| !! | AAATATGGGACTGGCCCTTC+TGG | + | Chr4:3271941-3271960 | None:intergenic | 50.0% |
| !! | CATGGACTGGAGTGTATCAG+TGG | - | Chr4:3271528-3271547 | MsG0480018318.01.T01:CDS | 50.0% |
| ACAGTGCCTCCATGAATCCC+AGG | + | Chr4:3273099-3273118 | None:intergenic | 55.0% | |
| CCTGCTATGGGCTTGGGTTT+CGG | + | Chr4:3272190-3272209 | None:intergenic | 55.0% | |
| CGTGTTCGAGGAAGCAAGAG+CGG | - | Chr4:3270490-3270509 | MsG0480018318.01.T01:intron | 55.0% | |
| GGCATAGAAGCCCTCCAGAA+AGG | - | Chr4:3272027-3272046 | MsG0480018318.01.T01:intron | 55.0% | |
| GTCCCAAGACTCGTGCTTAG+GGG | - | Chr4:3271976-3271995 | MsG0480018318.01.T01:intron | 55.0% | |
| GTGTTCGAGGAAGCAAGAGC+GGG | - | Chr4:3270491-3270510 | MsG0480018318.01.T01:intron | 55.0% | |
| TCCCAAGACTCGTGCTTAGG+GGG | - | Chr4:3271977-3271996 | MsG0480018318.01.T01:intron | 55.0% | |
| !! | AAGACTTGGTGCCCTCCAGA+AGG | - | Chr4:3271923-3271942 | MsG0480018318.01.T01:intron | 55.0% |
| !! | AGACTTGGTGCCCTCCAGAA+GGG | - | Chr4:3271924-3271943 | MsG0480018318.01.T01:intron | 55.0% |
| !! | CTGGAGGGCACCAAGTCTTT+AGG | + | Chr4:3271922-3271941 | None:intergenic | 55.0% |
| AGCCCCCTAAGCACGAGTCT+TGG | + | Chr4:3271982-3272001 | None:intergenic | 60.0% | |
| CAAAGCCTCAGGAGCCCTTC+TGG | + | Chr4:3272083-3272102 | None:intergenic | 60.0% | |
| CAGAAGGGCTCCTGAGGCTT+TGG | - | Chr4:3272081-3272100 | MsG0480018318.01.T01:intron | 60.0% | |
| CCGAAACCCAAGCCCATAGC+AGG | - | Chr4:3272187-3272206 | MsG0480018318.01.T01:intron | 60.0% | |
| GCCCCCTAAGCACGAGTCTT+GGG | + | Chr4:3271981-3272000 | None:intergenic | 60.0% | |
| GGGCGCCTAAGCCTTTCTAG+AGG | + | Chr4:3272059-3272078 | None:intergenic | 60.0% | |
| TTTAGAAGGGCGGCGCCCTA+AGG | + | Chr4:3272115-3272134 | None:intergenic | 60.0% | |
| !! | ATGGGACTGGCCCTTCTGGA+GGG | + | Chr4:3271937-3271956 | None:intergenic | 60.0% |
| !! | TATGGGACTGGCCCTTCTGG+AGG | + | Chr4:3271938-3271957 | None:intergenic | 60.0% |
| AGCCTCAGGAGCCCTTCTGG+AGG | + | Chr4:3272080-3272099 | None:intergenic | 65.0% | |
| AGGCTTAGGCGCCCTCCAGA+AGG | - | Chr4:3272065-3272084 | MsG0480018318.01.T01:intron | 65.0% | |
| CGATGGGTGGTGCGTGTTCG+AGG | - | Chr4:3270478-3270497 | MsG0480018318.01.T01:intron | 65.0% | |
| GCCTCAGGAGCCCTTCTGGA+GGG | + | Chr4:3272079-3272098 | None:intergenic | 65.0% | |
| GCTTTGGCGCGCTCGCCTTA+GGG | - | Chr4:3272097-3272116 | MsG0480018318.01.T01:intron | 65.0% | |
| GGCTTAGGCGCCCTCCAGAA+GGG | - | Chr4:3272066-3272085 | MsG0480018318.01.T01:intron | 65.0% | |
| GCCCTCCAGAAGGGCTCCTG+AGG | - | Chr4:3272075-3272094 | MsG0480018318.01.T01:intron | 70.0% | |
| ! | GGCTTTGGCGCGCTCGCCTT+AGG | - | Chr4:3272096-3272115 | MsG0480018318.01.T01:intron | 70.0% |
| GGCGAGCGCGCCAAAGCCTC+AGG | + | Chr4:3272094-3272113 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 3269605 | 3273463 | 3269605 | ID=MsG0480018318.01;Name=MsG0480018318.01 |
| Chr4 | mRNA | 3269605 | 3273463 | 3269605 | ID=MsG0480018318.01.T01;Parent=MsG0480018318.01;Name=MsG0480018318.01.T01;_AED=0.49;_eAED=0.51;_QI=250|0.5|0.6|1|0.25|0.4|5|0|249 |
| Chr4 | exon | 3269605 | 3269705 | 3269605 | ID=MsG0480018318.01.T01:exon:1384;Parent=MsG0480018318.01.T01 |
| Chr4 | exon | 3269939 | 3270084 | 3269939 | ID=MsG0480018318.01.T01:exon:1383;Parent=MsG0480018318.01.T01 |
| Chr4 | exon | 3271446 | 3271753 | 3271446 | ID=MsG0480018318.01.T01:exon:1382;Parent=MsG0480018318.01.T01 |
| Chr4 | exon | 3272394 | 3272691 | 3272394 | ID=MsG0480018318.01.T01:exon:1381;Parent=MsG0480018318.01.T01 |
| Chr4 | exon | 3273317 | 3273463 | 3273317 | ID=MsG0480018318.01.T01:exon:1380;Parent=MsG0480018318.01.T01 |
| Chr4 | five_prime_UTR | 3273317 | 3273463 | 3273317 | ID=MsG0480018318.01.T01:five_prime_utr;Parent=MsG0480018318.01.T01 |
| Chr4 | five_prime_UTR | 3272589 | 3272691 | 3272589 | ID=MsG0480018318.01.T01:five_prime_utr;Parent=MsG0480018318.01.T01 |
| Chr4 | CDS | 3272394 | 3272588 | 3272394 | ID=MsG0480018318.01.T01:cds;Parent=MsG0480018318.01.T01 |
| Chr4 | CDS | 3271446 | 3271753 | 3271446 | ID=MsG0480018318.01.T01:cds;Parent=MsG0480018318.01.T01 |
| Chr4 | CDS | 3269939 | 3270084 | 3269939 | ID=MsG0480018318.01.T01:cds;Parent=MsG0480018318.01.T01 |
| Chr4 | CDS | 3269605 | 3269705 | 3269605 | ID=MsG0480018318.01.T01:cds;Parent=MsG0480018318.01.T01 |
| Gene Sequence |
| Protein sequence |
