AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000845.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000845.01.T01 MTR_1g007340 96.752 431 14 0 1 431 1 431 0.0 859
MsG0180000845.01.T01 MTR_1g007340 75.758 231 55 1 434 664 120 349 7.48e-125 379
MsG0180000845.01.T01 MTR_1g007340 62.264 106 30 3 2 101 380 481 5.28e-30 124
MsG0180000845.01.T01 MTR_1g053270 82.645 363 63 0 10 372 22 384 0.0 639
MsG0180000845.01.T01 MTR_1g053270 80.913 241 44 2 425 664 122 361 7.05e-140 414
MsG0180000845.01.T01 MTR_1g007325 79.741 232 26 2 434 665 4 214 2.56e-127 376
MsG0180000845.01.T01 MTR_1g007325 65.234 256 69 1 117 372 1 236 2.92e-115 345
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000845.01.T01 AT1G28350 59.410 712 213 10 21 664 22 725 0.0 834
MsG0180000845.01.T01 AT1G28350 68.320 363 112 2 10 372 389 748 9.98e-175 516
MsG0180000845.01.T01 AT1G28350 59.410 712 213 10 21 664 22 725 0.0 834
MsG0180000845.01.T01 AT1G28350 68.320 363 112 2 10 372 389 748 9.98e-175 516
MsG0180000845.01.T01 AT1G28350 58.921 667 198 10 66 664 1 659 0.0 770
MsG0180000845.01.T01 AT1G28350 68.320 363 112 2 10 372 323 682 2.75e-175 516
MsG0180000845.01.T01 AT2G33840 74.432 352 88 1 21 372 36 385 0.0 566
MsG0180000845.01.T01 AT2G33840 71.861 231 62 2 434 664 135 362 3.41e-117 356

Find 152 sgRNAs with CRISPR-Local

Find 450 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTATCTTTCCGTGGTTTA+AGG 0.136700 1:+11965191 MsG0180000845.01.T01:CDS
GCCAGTACTTCATTGAAATT+TGG 0.185721 1:+11963681 MsG0180000845.01.T01:CDS
TGCTAAGTTGAACAATAAAA+TGG 0.211101 1:+11963628 MsG0180000845.01.T01:CDS
GTTCACTTCGTCCCATTATT+TGG 0.224298 1:-11963944 None:intergenic
CTCCTCATCTTCCATGTAAA+TGG 0.232675 1:-11964807 None:intergenic
AAGAGAGGTTTGAGATTGTT+AGG 0.241590 1:+11963008 MsG0180000845.01.T01:CDS
AGCTCCACCATTAATCTCTT+TGG 0.246383 1:-11963756 None:intergenic
TTTCAAAAGCTTTGAAGAAT+TGG 0.266152 1:+11969762 MsG0180000845.01.T01:CDS
TTACGGTGTGACAATATTAT+AGG 0.267862 1:-11964651 None:intergenic
TCTGCTTCCCCTATTGATAT+TGG 0.271841 1:-11967071 None:intergenic
CTGTAGTTGTAGCGAGATAA+TGG 0.288221 1:+11968183 MsG0180000845.01.T01:intron
CGGGTTGTCGAGTCAAAATA+TGG 0.291048 1:+11963591 MsG0180000845.01.T01:CDS
GGGTTTGCTTGAACTATCTT+TGG 0.302655 1:-11965147 None:intergenic
TCCATGAAAATGCATGATAA+TGG 0.313841 1:-11969143 None:intergenic
CTCAGAATAACAGCCTTAAA+AGG 0.322339 1:+11963810 MsG0180000845.01.T01:CDS
GGGTTTCCCTCGGCAATCTT+TGG 0.322538 1:-11969516 None:intergenic
TTGTAGGTGTAGCCAAATAA+TGG 0.323398 1:+11963932 MsG0180000845.01.T01:intron
TGGTCATCCAAAGAGATTAA+TGG 0.330747 1:+11963749 MsG0180000845.01.T01:CDS
TTTGAGATTGTTAGGAGTAT+TGG 0.334731 1:+11963016 MsG0180000845.01.T01:CDS
GATTGAAGTTGGAAAGCTAT+TGG 0.338949 1:+11967958 MsG0180000845.01.T01:intron
CTGAGATGTTGCATTTGAAT+TGG 0.340137 1:-11967135 None:intergenic
TCCATGTAAATGGATGATAA+TGG 0.358067 1:-11964797 None:intergenic
AGCTCTTGAAACATTGTCTA+TGG 0.360604 1:+11967103 MsG0180000845.01.T01:CDS
AGTATTGTGATGTTATTAAG+AGG 0.365525 1:+11964619 MsG0180000845.01.T01:CDS
GAAAGCTATTGGGATGGATA+TGG 0.365797 1:+11967969 MsG0180000845.01.T01:CDS
TTCGTTGATCTATTCCCATT+TGG 0.389228 1:-11968909 None:intergenic
CTTGAACTATGTAGTCTGTC+AGG 0.394743 1:+11966560 MsG0180000845.01.T01:intron
TCCAAATTTCAATGAAGTAC+TGG 0.399482 1:-11963682 None:intergenic
ATGGAGTGTGGGGCAGATAA+TGG 0.408690 1:+11965222 MsG0180000845.01.T01:CDS
CCATGAAAATGCATGATAAT+GGG 0.408792 1:-11969142 None:intergenic
TCTTTAATCAGCACATTACT+TGG 0.409793 1:-11970362 None:intergenic
GCTTGTTGGCAAGGATGTTA+AGG 0.411469 1:-11967308 None:intergenic
TCAAAATATGGGTTGCTGAT+TGG 0.414231 1:+11963603 MsG0180000845.01.T01:CDS
ATTATTGTGATATTATTAAG+AGG 0.419869 1:+11968953 MsG0180000845.01.T01:CDS
ATACCGTGTGACAAAATAAC+TGG 0.421589 1:-11968985 None:intergenic
TTAGTCTTCAAAGGATTCTC+AGG 0.423081 1:+11968085 MsG0180000845.01.T01:CDS
TCTTGCCCTTGTTGCAGACC+AGG 0.424708 1:-11964755 None:intergenic
TAGGTCGACATTTGCCAAAT+GGG 0.426876 1:+11968895 MsG0180000845.01.T01:intron
ATTGAAGTTGGAAAGCTATT+GGG 0.427578 1:+11967959 MsG0180000845.01.T01:intron
TTGAGACTGTGAAGAGTGTT+GGG 0.429601 1:+11967259 MsG0180000845.01.T01:CDS
ACAGCCTTAAAAGGATTGTC+AGG 0.430574 1:+11963819 MsG0180000845.01.T01:CDS
CCCATTATCATCCATTTACA+TGG 0.433291 1:+11964796 MsG0180000845.01.T01:CDS
TCCAGGGAACCAATATCAAT+AGG 0.436253 1:+11967062 MsG0180000845.01.T01:intron
GTTCAAAAGCTTTGAAGAGT+TGG 0.438761 1:+11965427 MsG0180000845.01.T01:CDS
TGTAGGTGTAGCCAAATAAT+GGG 0.439733 1:+11963933 MsG0180000845.01.T01:intron
TCTTGCCCTTGCTGTGGACC+AGG 0.440766 1:-11969101 None:intergenic
CCAGGGAACCAATATCAATA+GGG 0.441610 1:+11967063 MsG0180000845.01.T01:intron
TTTCCCTCGGCAATCTTTGG+TGG 0.442859 1:-11969513 None:intergenic
ACATCCAGAGGACCTCAAAC+TGG 0.444445 1:+11965475 MsG0180000845.01.T01:CDS
ATAGGCCGACATCTGCCAAT+TGG 0.446232 1:+11964560 MsG0180000845.01.T01:intron
TTGAAGAGGTTCTGCGTCTC+CGG 0.449035 1:-11962842 None:intergenic
ATAGGTCGACATTTGCCAAA+TGG 0.451851 1:+11968894 MsG0180000845.01.T01:intron
TTGGTTGCTGACTATGAAAT+CGG 0.459516 1:+11969781 MsG0180000845.01.T01:CDS
ACCACGGAAAGATAAGATAT+CGG 0.461319 1:-11965185 None:intergenic
GCTAAGTTGAACAATAAAAT+GGG 0.464780 1:+11963629 MsG0180000845.01.T01:CDS
TAGGCCGACATCTGCCAATT+GGG 0.465959 1:+11964561 MsG0180000845.01.T01:intron
TGGACGAATGCACATTGCTC+AGG 0.467817 1:+11963123 MsG0180000845.01.T01:CDS
CTCAGAAGTTTAGTCTTCAA+AGG 0.469252 1:+11968076 MsG0180000845.01.T01:CDS
AATAATGGGACGAAGTGAAC+AGG 0.469367 1:+11963947 MsG0180000845.01.T01:CDS
CGAGTATTGGCCGCTTGTGT+TGG 0.469729 1:+11968047 MsG0180000845.01.T01:CDS
AAAGCCAGTTTGAGGTCCTC+TGG 0.473971 1:-11965479 None:intergenic
TTCGCTGATCCATTCCCAAT+TGG 0.475955 1:-11964575 None:intergenic
GTGGTTTAAGGAGTTCACTA+TGG 0.479089 1:+11965203 MsG0180000845.01.T01:CDS
CAATATCTTTCTTGTTAGCA+AGG 0.480246 1:-11963075 None:intergenic
ATCTTCTCTTGCCCTTGCTG+TGG 0.480771 1:-11969107 None:intergenic
TTTGCTTGAACTATCTTTGG+TGG 0.482747 1:-11965144 None:intergenic
ATTGAAATTTGGAAAGCCAC+TGG 0.482969 1:+11963692 MsG0180000845.01.T01:CDS
TTCTTAATGTAGTCCAAGCA+TGG 0.483445 1:-11969537 None:intergenic
CCATGTAAATGGATGATAAT+GGG 0.484458 1:-11964796 None:intergenic
TGCCGAGGGAAACCCATGCT+TGG 0.485575 1:+11969524 MsG0180000845.01.T01:CDS
TGTAGTTGTAGCGAGATAAT+GGG 0.485778 1:+11968184 MsG0180000845.01.T01:intron
TTTAATGACTTCGACAAAGC+TGG 0.488272 1:-11969829 None:intergenic
TTGCTTGAACTATCTTTGGT+GGG 0.493037 1:-11965143 None:intergenic
CGGCCAATACTCGTCAGCTC+TGG 0.493969 1:-11968037 None:intergenic
TTCCCTCGGCAATCTTTGGT+GGG 0.495747 1:-11969512 None:intergenic
ATGTCAGCACATTGCATGCA+TGG 0.498935 1:-11968253 None:intergenic
GTGGAGCGTAGTGCTGATAA+TGG 0.501868 1:+11969591 MsG0180000845.01.T01:CDS
TTAAACAAAATTGAGACGGT+TGG 0.502241 1:+11963659 MsG0180000845.01.T01:CDS
AGGCCAGAGCTGACGAGTAT+TGG 0.502710 1:+11968034 MsG0180000845.01.T01:CDS
ACTTTGACAAAGCCAGTTTG+AGG 0.504966 1:-11965487 None:intergenic
AGCAAACAGGATCAGCTTGT+TGG 0.511293 1:-11967322 None:intergenic
AAAGCTGGTTTAAGATCAGC+TGG 0.516888 1:-11969814 None:intergenic
CCTCCACCGTCAGCAATGGC+CGG 0.519452 1:+11962823 None:intergenic
GAGTGTGGGGCAGATAATGG+TGG 0.522761 1:+11965225 MsG0180000845.01.T01:CDS
TTTGAGACTGTGAAGAGTGT+TGG 0.524572 1:+11967258 MsG0180000845.01.T01:CDS
TCCGATATCTTATCTTTCCG+TGG 0.526364 1:+11965184 MsG0180000845.01.T01:CDS
AATAACATCACAATACTCTC+TGG 0.528355 1:-11964613 None:intergenic
AGTGAATATGAAAATAGAAA+AGG 0.529323 1:+11965113 MsG0180000845.01.T01:CDS
ATGTCAGCACACTGCATGCA+TGG 0.529807 1:-11963999 None:intergenic
TTGAAATTTGGAAAGCCACT+GGG 0.532704 1:+11963693 MsG0180000845.01.T01:CDS
CGACATCTGCCAATTGGGAA+TGG 0.537270 1:+11964566 MsG0180000845.01.T01:CDS
AGGAGTTCACTATGGAGTGT+GGG 0.540032 1:+11965211 MsG0180000845.01.T01:CDS
ATGGTGGAGCTGATAAGTAC+TGG 0.542353 1:+11963768 MsG0180000845.01.T01:CDS
TCTTAATGTAGTCCAAGCAT+GGG 0.542374 1:-11969536 None:intergenic
GTGAACAAGTTAACATCTGC+GGG 0.543389 1:+11963572 MsG0180000845.01.T01:CDS
TTTGAATCTGATGATTGAAG+AGG 0.544976 1:-11962856 None:intergenic
TGTTACCTGGTCTGCAACAA+GGG 0.551325 1:+11964750 MsG0180000845.01.T01:CDS
AAAGATATTGTTTGTTACGA+CGG 0.551552 1:+11963088 MsG0180000845.01.T01:CDS
TTGAACTATGTAGTCTGTCA+GGG 0.551640 1:+11966561 MsG0180000845.01.T01:intron
ACAGGATCAGCTTGTTGGCA+AGG 0.553463 1:-11967317 None:intergenic
TATCGGATGTACTCTAAGCA+TGG 0.554262 1:-11965168 None:intergenic
GTCCAAGCATGGGTTTCCCT+CGG 0.556731 1:-11969526 None:intergenic
ATGTTACCTGGTCTGCAACA+AGG 0.559308 1:+11964749 MsG0180000845.01.T01:CDS
AAGGAGTTCACTATGGAGTG+TGG 0.567662 1:+11965210 MsG0180000845.01.T01:CDS
ATGTTACCTGGTCCACAGCA+AGG 0.575328 1:+11969095 MsG0180000845.01.T01:CDS
AATTTGGAAAGCCACTGGGA+TGG 0.575399 1:+11963697 MsG0180000845.01.T01:CDS
TGCAGGCTTACAGAGTCACC+AGG 0.578783 1:+11966736 MsG0180000845.01.T01:intron
TCTGTTGCAGGTCGTTGCAG+AGG 0.582102 1:+11967235 MsG0180000845.01.T01:intron
ATCGGATGTACTCTAAGCAT+GGG 0.582460 1:-11965167 None:intergenic
ATCCATTTACATGGAAGATG+AGG 0.585222 1:+11964805 MsG0180000845.01.T01:CDS
CATTCCCAATTGGCAGATGT+CGG 0.585557 1:-11964565 None:intergenic
AAGTTGGAAAGCTATTGGGA+TGG 0.589917 1:+11967963 MsG0180000845.01.T01:intron
GTCATTAAATAAAATTCTAG+AGG 0.596153 1:+11969843 MsG0180000845.01.T01:CDS
TGTGAACAAGTTAACATCTG+CGG 0.596544 1:+11963571 MsG0180000845.01.T01:CDS
GGTCATTGAGTGTTGAAGAG+AGG 0.598767 1:+11962993 MsG0180000845.01.T01:intron
ATTGGGATGGATATGGAAGG+AGG 0.598963 1:+11967976 MsG0180000845.01.T01:CDS
GTCATTGAATAAAATTCTAG+AGG 0.600216 1:+11965508 MsG0180000845.01.T01:CDS
AGAGCTACTAAAAGAAGTCA+AGG 0.601021 1:+11966612 MsG0180000845.01.T01:CDS
GCTATTGGGATGGATATGGA+AGG 0.603158 1:+11967973 MsG0180000845.01.T01:CDS
CATTTACATGGAAGATGAGG+AGG 0.605288 1:+11964808 MsG0180000845.01.T01:CDS
AGATTTAAACAAAATTGAGA+CGG 0.605847 1:+11963655 MsG0180000845.01.T01:CDS
TGCCCACCAAAGATTGCCGA+GGG 0.606717 1:+11969510 MsG0180000845.01.T01:CDS
TTGCCCACCAAAGATTGCCG+AGG 0.610802 1:+11969509 MsG0180000845.01.T01:CDS
GGGTTGTCGAGTCAAAATAT+GGG 0.612585 1:+11963592 MsG0180000845.01.T01:CDS
ACTGGGATGGATTTCGAAGG+AGG 0.614038 1:+11963710 MsG0180000845.01.T01:CDS
TGGATAGAATATTTGAGAAG+CGG 0.622836 1:-11963979 None:intergenic
GCAATGTGCATTCGTCCAGA+AGG 0.623405 1:-11963118 None:intergenic
ATAGTGAACTCCTTAAACCA+CGG 0.625427 1:-11965201 None:intergenic
CAGGGAACCAATATCAATAG+GGG 0.626702 1:+11967064 MsG0180000845.01.T01:intron
GGAGTTCACTATGGAGTGTG+GGG 0.631293 1:+11965212 MsG0180000845.01.T01:CDS
TGTTACCTGGTCCACAGCAA+GGG 0.631409 1:+11969096 MsG0180000845.01.T01:CDS
TTGGTTGTTGACTATGAAAG+CGG 0.631709 1:+11965446 MsG0180000845.01.T01:CDS
TGGGGAAGAGTGCACTCAAG+AGG 0.632415 1:+11967278 MsG0180000845.01.T01:CDS
TTAAGAAACTTGTCTTACCG+TGG 0.634608 1:+11969553 MsG0180000845.01.T01:CDS
GCCACTGGGATGGATTTCGA+AGG 0.644523 1:+11963707 MsG0180000845.01.T01:CDS
GTGGTCCTCAAAAGAGATCG+AGG 0.644999 1:+11968014 MsG0180000845.01.T01:CDS
CTGGGATGGATTTCGAAGGA+GGG 0.646443 1:+11963711 MsG0180000845.01.T01:CDS
TGAGACTGTGAAGAGTGTTG+GGG 0.653345 1:+11967260 MsG0180000845.01.T01:CDS
GTGGTTTAACGAGTTTACTG+TGG 0.654072 1:+11969572 MsG0180000845.01.T01:CDS
TGTCAGGGAACACTTTCGAA+AGG 0.662394 1:+11966576 MsG0180000845.01.T01:CDS
TCATCCAAAGAGATTAATGG+TGG 0.666178 1:+11963752 MsG0180000845.01.T01:CDS
TGAGCTATATCCAACACAAG+CGG 0.666640 1:-11968057 None:intergenic
AGTGAACATGAAGAATCCGC+TGG 0.672166 1:+11968211 MsG0180000845.01.T01:CDS
AAGCGGAGAGGTACATCCAG+AGG 0.682554 1:+11965463 MsG0180000845.01.T01:CDS
AAGTTGAACAATAAAATGGG+AGG 0.683219 1:+11963632 MsG0180000845.01.T01:CDS
AGTGTGGGGCAGATAATGGT+GGG 0.686173 1:+11965226 MsG0180000845.01.T01:CDS
GAGCGTAGTGCTGATAATGG+TGG 0.690334 1:+11969594 MsG0180000845.01.T01:CDS
TCCTTCGAAATCCATCCCAG+TGG 0.692168 1:-11963708 None:intergenic
GAATATTTGAGAAGTACCAG+CGG 0.710946 1:-11968227 None:intergenic
ACAGTAAACTCGTTAAACCA+CGG 0.711812 1:-11969570 None:intergenic
TGTTGACTATGAAAGCGGAG+AGG 0.762601 1:+11965451 MsG0180000845.01.T01:CDS
TGAGCTATATCTAACACACG+AGG 0.787457 1:-11963791 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATTAAAAATATAAGC+AGG + Chr1:11969292-11969311 MsG0180000845.01.T01:intron 10.0%
!! AAACAATTATATCTTATAAT+AGG + Chr1:11964542-11964561 MsG0180000845.01.T01:intron 10.0%
!! ACTTAAAAATAATTAAATCA+TGG - Chr1:11967529-11967548 None:intergenic 10.0%
!! AGATATATTAATATGTATAA+TGG + Chr1:11967404-11967423 MsG0180000845.01.T01:intron 10.0%
!! TACAACTATTATTATTATAA+TGG - Chr1:11965295-11965314 None:intergenic 10.0%
!! TTATAAAGTATAATCATATT+GGG + Chr1:11965700-11965719 MsG0180000845.01.T01:intron 10.0%
!!! ATGTATTAGTTTTTTATATT+GGG + Chr1:11968461-11968480 MsG0180000845.01.T01:intron 10.0%
!!! TAATTATTTTTAAGTTGATT+TGG + Chr1:11967534-11967553 MsG0180000845.01.T01:intron 10.0%
!!! TAGAAAAAAATTTAATTTCT+CGG - Chr1:11967697-11967716 None:intergenic 10.0%
!!! TTCTTTTTTCAAATTATTAT+CGG - Chr1:11963246-11963265 None:intergenic 10.0%
!!! TTGAAATATTTTTTCTTTTT+TGG + Chr1:11963899-11963918 MsG0180000845.01.T01:intron 10.0%
!! AAATTATTCATTCTTTACAT+AGG + Chr1:11966031-11966050 MsG0180000845.01.T01:intron 15.0%
!! AAATTTAAATGTTGTGTTAT+TGG + Chr1:11965750-11965769 MsG0180000845.01.T01:intron 15.0%
!! AATTAAATTAAATGGCATTA+TGG - Chr1:11966795-11966814 None:intergenic 15.0%
!! ACAAAAAATATATAGTATGT+TGG + Chr1:11969322-11969341 MsG0180000845.01.T01:intron 15.0%
!! AGAACTCTTAAATAAATAAA+TGG + Chr1:11968431-11968450 MsG0180000845.01.T01:intron 15.0%
!! ATTATTGTGATATTATTAAG+AGG + Chr1:11968953-11968972 MsG0180000845.01.T01:CDS 15.0%
!! CTTATAAAGTATAATCATAT+TGG + Chr1:11965699-11965718 MsG0180000845.01.T01:intron 15.0%
!! TAAAAAAAAACCAATTTAGA+TGG + Chr1:11969911-11969930 MsG0180000845.01.T01:intron 15.0%
!!! AAAACATTTATGTAGTTTTT+TGG + Chr1:11966951-11966970 MsG0180000845.01.T01:intron 15.0%
!!! AATGCTTTTTATCTTAAAAT+AGG + Chr1:11968876-11968895 MsG0180000845.01.T01:intron 15.0%
!!! ATAATTCTAAAGTTACATAA+TGG + Chr1:11964121-11964140 MsG0180000845.01.T01:intron 15.0%
!!! ATTAATATTTTTGTTGAAGA+GGG - Chr1:11967620-11967639 None:intergenic 15.0%
!!! CATGTATTAGTTTTTTATAT+TGG + Chr1:11968460-11968479 MsG0180000845.01.T01:intron 15.0%
!!! TAAATTTGTTATCATTACAA+AGG + Chr1:11964851-11964870 MsG0180000845.01.T01:intron 15.0%
!!! TATATTTCGATTTTAGTATA+TGG + Chr1:11969656-11969675 MsG0180000845.01.T01:intron 15.0%
!!! TATTAATATTTTTGTTGAAG+AGG - Chr1:11967621-11967640 None:intergenic 15.0%
!!! TTTTTTCATTTCTTTATTTC+TGG + Chr1:11970122-11970141 MsG0180000845.01.T01:intron 15.0%
!! AAAAAGCTAGAAAAGATTTA+AGG - Chr1:11969685-11969704 None:intergenic 20.0%
!! AGATACAAAATATTTAACAC+AGG - Chr1:11969714-11969733 None:intergenic 20.0%
!! AGATTTAAACAAAATTGAGA+CGG + Chr1:11963655-11963674 MsG0180000845.01.T01:CDS 20.0%
!! AGTGAATATGAAAATAGAAA+AGG + Chr1:11965113-11965132 MsG0180000845.01.T01:CDS 20.0%
!! AGTGAATGTGAAAATAAAAA+AGG + Chr1:11969482-11969501 MsG0180000845.01.T01:CDS 20.0%
!! ATAGAAACAATAAGAAACTA+AGG - Chr1:11968742-11968761 None:intergenic 20.0%
!! ATATAGTATGTTGGAATAAA+AGG + Chr1:11969331-11969350 MsG0180000845.01.T01:intron 20.0%
!! ATATATCTACTCATAGAATA+AGG + Chr1:11967461-11967480 MsG0180000845.01.T01:intron 20.0%
!! ATGGAAGATAAAAGTTTAAA+TGG - Chr1:11965276-11965295 None:intergenic 20.0%
!! ATTAAGTAGAAAGAAACTTA+CGG - Chr1:11962898-11962917 None:intergenic 20.0%
!! ATTTAGCAGAATATTAGTAT+GGG + Chr1:11964965-11964984 MsG0180000845.01.T01:intron 20.0%
!! CAATACATGAAAATATGAAA+TGG - Chr1:11964415-11964434 None:intergenic 20.0%
!! CAATTTACAAAACAAAAACT+TGG - Chr1:11967431-11967450 None:intergenic 20.0%
!! GTCATTAAATAAAATTCTAG+AGG + Chr1:11969843-11969862 MsG0180000845.01.T01:CDS 20.0%
!! TACAAAAATATCAACCAAAA+AGG - Chr1:11965033-11965052 None:intergenic 20.0%
!! TCATAAAACAATGTTCATAT+AGG + Chr1:11968379-11968398 MsG0180000845.01.T01:intron 20.0%
!! TGCAAAACAAAAACAAATTT+AGG - Chr1:11966720-11966739 None:intergenic 20.0%
!! TGGAAGATAAAAGTTTAAAT+GGG - Chr1:11965275-11965294 None:intergenic 20.0%
!! TTGTATCATTACATCTTTAT+TGG + Chr1:11966246-11966265 MsG0180000845.01.T01:intron 20.0%
!! TTTCTTATGGAATTTGAAAA+TGG + Chr1:11964294-11964313 MsG0180000845.01.T01:intron 20.0%
!!! ACTCTTTTACTGTATATATA+GGG + Chr1:11967798-11967817 MsG0180000845.01.T01:intron 20.0%
!!! ATTTCTTTATTTCTGGTATA+TGG + Chr1:11970129-11970148 MsG0180000845.01.T01:intron 20.0%
!!! GCTTATTTTCAAATGATTTA+AGG + Chr1:11963494-11963513 MsG0180000845.01.T01:intron 20.0%
!!! TAAATTTGTTTTTGTTTTGC+AGG + Chr1:11966719-11966738 MsG0180000845.01.T01:intron 20.0%
!!! TGATTTTGTAAGAATATGTT+TGG + Chr1:11963392-11963411 MsG0180000845.01.T01:intron 20.0%
!!! TGTGATTTTATGTAAACATT+TGG + Chr1:11964998-11965017 MsG0180000845.01.T01:intron 20.0%
!!! TTGTATATATGTTTTCTCTT+TGG + Chr1:11970292-11970311 MsG0180000845.01.T01:intron 20.0%
! AAAAATCTAAGAACAGTACA+GGG - Chr1:11964265-11964284 None:intergenic 25.0%
! AGTATTGTGATGTTATTAAG+AGG + Chr1:11964619-11964638 MsG0180000845.01.T01:CDS 25.0%
! ATTGTGTCCTTTATTGTTAA+TGG + Chr1:11964370-11964389 MsG0180000845.01.T01:intron 25.0%
! ATTGTGTTAACCATCTAAAT+TGG - Chr1:11969924-11969943 None:intergenic 25.0%
! CTTCTACTTATGTGTTTATA+GGG + Chr1:11963530-11963549 MsG0180000845.01.T01:intron 25.0%
! GAAGATAAAAGTTTAAATGG+GGG - Chr1:11965273-11965292 None:intergenic 25.0%
! GATTTAGCAGAATATTAGTA+TGG + Chr1:11964964-11964983 MsG0180000845.01.T01:intron 25.0%
! GGAAGATAAAAGTTTAAATG+GGG - Chr1:11965274-11965293 None:intergenic 25.0%
! GTCATTGAATAAAATTCTAG+AGG + Chr1:11965508-11965527 MsG0180000845.01.T01:CDS 25.0%
! GTCATTTGCTTGAAATATAT+TGG + Chr1:11968848-11968867 MsG0180000845.01.T01:intron 25.0%
! GTTCTATCATATACTTAAGT+TGG + Chr1:11966146-11966165 MsG0180000845.01.T01:intron 25.0%
! TAATCATAACAGTAGTTAGT+CGG - Chr1:11965895-11965914 None:intergenic 25.0%
! TATTAACGAGTATCAACTAT+TGG + Chr1:11966885-11966904 MsG0180000845.01.T01:intron 25.0%
! TATTTAGTTGCATTCTTCTT+TGG + Chr1:11964890-11964909 MsG0180000845.01.T01:intron 25.0%
! TCTTCTACTTATGTGTTTAT+AGG + Chr1:11963529-11963548 MsG0180000845.01.T01:intron 25.0%
! TGCTAAACTTAATAATGACT+GGG + Chr1:11967896-11967915 MsG0180000845.01.T01:intron 25.0%
! TGTTAAGTGAAAGACTAAAA+CGG + Chr1:11965918-11965937 MsG0180000845.01.T01:intron 25.0%
! TTAAGAACTGGAAAAACAAA+TGG + Chr1:11964182-11964201 MsG0180000845.01.T01:intron 25.0%
! TTGCTAAACTTAATAATGAC+TGG + Chr1:11967895-11967914 MsG0180000845.01.T01:intron 25.0%
! TTTAGCAGAATATTAGTATG+GGG + Chr1:11964966-11964985 MsG0180000845.01.T01:intron 25.0%
!! AAAGATATTGTTTGTTACGA+CGG + Chr1:11963088-11963107 MsG0180000845.01.T01:CDS 25.0%
!! AACTATTATTGCTTTAAGTC+TGG + Chr1:11965326-11965345 MsG0180000845.01.T01:intron 25.0%
!! CACTCTTTTACTGTATATAT+AGG + Chr1:11967797-11967816 MsG0180000845.01.T01:intron 25.0%
!! CAGTTTAAAATAAATTTCCG+TGG + Chr1:11967201-11967220 MsG0180000845.01.T01:intron 25.0%
!! GACTTTTCAAACTTTGTATT+TGG + Chr1:11969445-11969464 MsG0180000845.01.T01:intron 25.0%
!! GCTAAGTTGAACAATAAAAT+GGG + Chr1:11963629-11963648 MsG0180000845.01.T01:CDS 25.0%
!! GTGTTTAATAAGTGTGATTT+TGG + Chr1:11963313-11963332 MsG0180000845.01.T01:intron 25.0%
!! TGCTAAGTTGAACAATAAAA+TGG + Chr1:11963628-11963647 MsG0180000845.01.T01:CDS 25.0%
!! TTGTGTTTGAAATTTCTATG+TGG + Chr1:11970068-11970087 MsG0180000845.01.T01:intron 25.0%
!! TTTGGATTAACTCTTGATTT+TGG + Chr1:11963331-11963350 MsG0180000845.01.T01:intron 25.0%
!! TTTGGTTATTTGTTCCTTTT+TGG + Chr1:11965016-11965035 MsG0180000845.01.T01:intron 25.0%
!! TTTTCTGTCTTAGTTTCTTA+TGG + Chr1:11964281-11964300 MsG0180000845.01.T01:intron 25.0%
!! TTTTTCTTGTAAGACTTAAG+AGG - Chr1:11965580-11965599 None:intergenic 25.0%
!!! AACTACAATTGTTTTGTTTC+TGG + Chr1:11968707-11968726 MsG0180000845.01.T01:intron 25.0%
!!! ACTTTGTATTTGGTTTTCAT+AGG + Chr1:11965086-11965105 MsG0180000845.01.T01:intron 25.0%
!!! TAATGCAAGCATTGATATAT+AGG - Chr1:11968310-11968329 None:intergenic 25.0%
!!! TCTAGTTGTGTTGTTTATTA+TGG + Chr1:11968805-11968824 MsG0180000845.01.T01:intron 25.0%
!!! TTATTTTAAACTGAAACCTC+AGG - Chr1:11967194-11967213 None:intergenic 25.0%
!!! TTTCAAAAGCTTTGAAGAAT+TGG + Chr1:11969762-11969781 MsG0180000845.01.T01:CDS 25.0%
AAAAACAAATGGATGCACAA+TGG + Chr1:11964193-11964212 MsG0180000845.01.T01:intron 30.0%
AAAATGCAATCAACACCAAT+AGG - Chr1:11966410-11966429 None:intergenic 30.0%
AAATGCAATCAACACCAATA+GGG - Chr1:11966409-11966428 None:intergenic 30.0%
AAGAGCTACTAAAAAAGTCA+AGG + Chr1:11970222-11970241 MsG0180000845.01.T01:intron 30.0%
AAGGAAAAATCAAGTCTAGA+GGG + Chr1:11967480-11967499 MsG0180000845.01.T01:intron 30.0%
AAGTTGAACAATAAAATGGG+AGG + Chr1:11963632-11963651 MsG0180000845.01.T01:CDS 30.0%
AATAACATCACAATACTCTC+TGG - Chr1:11964616-11964635 None:intergenic 30.0%
ACAAATATACATTAGCCGAA+AGG - Chr1:11964692-11964711 None:intergenic 30.0%
ACACTAACTGAATTTGTCTT+TGG + Chr1:11970319-11970338 MsG0180000845.01.T01:intron 30.0%
ACTTTGTATTTGGATATCAC+AGG + Chr1:11969455-11969474 MsG0180000845.01.T01:intron 30.0%
AGAGTGTAATTATGTATCAG+AGG - Chr1:11967783-11967802 None:intergenic 30.0%
ATCAAAAACGAAACTGAAAC+TGG - Chr1:11962950-11962969 None:intergenic 30.0%
ATCTAAAAGCCGGATTTATA+AGG - Chr1:11968497-11968516 None:intergenic 30.0%
ATTGAAGTTGGAAAGCTATT+GGG + Chr1:11967959-11967978 MsG0180000845.01.T01:intron 30.0%
CAATAAAGGACACAATATCT+TGG - Chr1:11964366-11964385 None:intergenic 30.0%
CAATATCTTTCTTGTTAGCA+AGG - Chr1:11963078-11963097 None:intergenic 30.0%
CCAATATCTTTCAAGCATAT+TGG - Chr1:11964510-11964529 None:intergenic 30.0%
CCAATATGCTTGAAAGATAT+TGG + Chr1:11964507-11964526 MsG0180000845.01.T01:intron 30.0%
CCATGAAAATGCATGATAAT+GGG - Chr1:11969145-11969164 None:intergenic 30.0%
CCATGTAAATGGATGATAAT+GGG - Chr1:11964799-11964818 None:intergenic 30.0%
CTAAACTTAATAATGACTGG+GGG + Chr1:11967898-11967917 MsG0180000845.01.T01:intron 30.0%
CTACAATGGTTGCATTAAAA+TGG + Chr1:11968594-11968613 MsG0180000845.01.T01:intron 30.0%
CTACTAAAAAAGTCAAGGTT+GGG + Chr1:11970227-11970246 MsG0180000845.01.T01:intron 30.0%
GAAAAATCTAAGAACAGTAC+AGG - Chr1:11964266-11964285 None:intergenic 30.0%
GAAAACCAAATTCTCAATTC+TGG - Chr1:11966088-11966107 None:intergenic 30.0%
GAAACAATAAGAAACTAAGG+CGG - Chr1:11968739-11968758 None:intergenic 30.0%
GAAAGAAATAGCAATTGCAA+TGG + Chr1:11966998-11967017 MsG0180000845.01.T01:intron 30.0%
GACTGTTCAAACTTTGTATT+TGG + Chr1:11965076-11965095 MsG0180000845.01.T01:intron 30.0%
GCTAAACTTAATAATGACTG+GGG + Chr1:11967897-11967916 MsG0180000845.01.T01:intron 30.0%
GGTTAACATATGATAGATCA+AGG + Chr1:11965771-11965790 MsG0180000845.01.T01:intron 30.0%
GTTTCTATATGTAAACTAGC+TGG + Chr1:11968754-11968773 MsG0180000845.01.T01:intron 30.0%
TAAGCTAAAGTAGTCAATGT+AGG - Chr1:11964066-11964085 None:intergenic 30.0%
TAAGGAAAAATCAAGTCTAG+AGG + Chr1:11967479-11967498 MsG0180000845.01.T01:intron 30.0%
TAGTCTACTTGTAATATGTC+TGG + Chr1:11965723-11965742 MsG0180000845.01.T01:intron 30.0%
TCAAAATAGTGATTGCTGAT+TGG + Chr1:11967871-11967890 MsG0180000845.01.T01:intron 30.0%
TCCAAATTTCAATGAAGTAC+TGG - Chr1:11963685-11963704 None:intergenic 30.0%
TCCATGAAAATGCATGATAA+TGG - Chr1:11969146-11969165 None:intergenic 30.0%
TCCATGTAAATGGATGATAA+TGG - Chr1:11964800-11964819 None:intergenic 30.0%
TCTCTTTATAAACTCTAGTC+AGG + Chr1:11968527-11968546 MsG0180000845.01.T01:intron 30.0%
TGACTAGAGTTTATAAAGAG+AGG - Chr1:11968528-11968547 None:intergenic 30.0%
TGGATAGAATATTTGAGAAG+CGG - Chr1:11963982-11964001 None:intergenic 30.0%
TGTGATCTTATGTAAGATTG+TGG + Chr1:11969355-11969374 MsG0180000845.01.T01:intron 30.0%
TGTGGTAATATATACCCTAT+TGG + Chr1:11966392-11966411 MsG0180000845.01.T01:intron 30.0%
TGTGTGCAGAATCAATAATA+GGG - Chr1:11966058-11966077 None:intergenic 30.0%
TTAAACAAAATTGAGACGGT+TGG + Chr1:11963659-11963678 MsG0180000845.01.T01:CDS 30.0%
TTACGGTGTGACAATATTAT+AGG - Chr1:11964654-11964673 None:intergenic 30.0%
TTAGCAGAATATTAGTATGG+GGG + Chr1:11964967-11964986 MsG0180000845.01.T01:intron 30.0%
TTCATGCTTCCTTTCAATAT+AGG + Chr1:11965402-11965421 MsG0180000845.01.T01:intron 30.0%
TTCCTCTCCATTAACAATAA+AGG - Chr1:11964380-11964399 None:intergenic 30.0%
TTGAAGAAAATTGAGACGAT+TGG + Chr1:11967926-11967945 MsG0180000845.01.T01:intron 30.0%
TTTCCAATAGATTGCTACAA+TGG + Chr1:11968580-11968599 MsG0180000845.01.T01:intron 30.0%
TTTGAAAGTCCTAGAATGAA+CGG - Chr1:11969749-11969768 None:intergenic 30.0%
TTTGAACGTCCTATATTGAA+AGG - Chr1:11965414-11965433 None:intergenic 30.0%
TTTGAATCTGATGATTGAAG+AGG - Chr1:11962859-11962878 None:intergenic 30.0%
! ACACTATCTAAAATGAAACC+AGG - Chr1:11969021-11969040 None:intergenic 30.0%
! CTTACTAGTAATTGATTCTG+GGG + Chr1:11969060-11969079 MsG0180000845.01.T01:intron 30.0%
! GCTTACTAGTAATTGATTCT+GGG + Chr1:11969059-11969078 MsG0180000845.01.T01:intron 30.0%
! TGCTTACTAGTAATTGATTC+TGG + Chr1:11969058-11969077 MsG0180000845.01.T01:intron 30.0%
! TGTTTGAAATTTCTATGTGG+TGG + Chr1:11970071-11970090 MsG0180000845.01.T01:intron 30.0%
! TGTTTGTTACTGTTAAGAAC+TGG + Chr1:11964170-11964189 MsG0180000845.01.T01:intron 30.0%
! TTTGAGATTGTTAGGAGTAT+TGG + Chr1:11963016-11963035 MsG0180000845.01.T01:CDS 30.0%
!! AAACCAGTTATTTTGTCACA+CGG + Chr1:11968982-11969001 MsG0180000845.01.T01:CDS 30.0%
!! GTTTACCATTTTCTGATTTG+AGG + Chr1:11964040-11964059 MsG0180000845.01.T01:intron 30.0%
!! TTGCAATGTTGTTTCATGTT+TGG + Chr1:11968150-11968169 MsG0180000845.01.T01:intron 30.0%
!!! ACATTTTTTTCTTCCAGGTA+CGG + Chr1:11968272-11968291 MsG0180000845.01.T01:intron 30.0%
!!! GAGGTAATGTTTTAGAGAAA+TGG + Chr1:11969862-11969881 MsG0180000845.01.T01:intron 30.0%
AACAGAAAAACATAGCACCA+CGG - Chr1:11967221-11967240 None:intergenic 35.0%
AAGCAGATATAGTGCTTTAC+TGG - Chr1:11966192-11966211 None:intergenic 35.0%
AAGGGATATGAGAGAATTAG+AGG + Chr1:11965972-11965991 MsG0180000845.01.T01:intron 35.0%
AAGTCAAGGTTATGCTTGTT+TGG + Chr1:11966626-11966645 MsG0180000845.01.T01:intron 35.0%
ACAGTAAACTCGTTAAACCA+CGG - Chr1:11969573-11969592 None:intergenic 35.0%
ACCACGGAAAGATAAGATAT+CGG - Chr1:11965188-11965207 None:intergenic 35.0%
ACTATTGGAGTATGCATCTT+TGG + Chr1:11966900-11966919 MsG0180000845.01.T01:intron 35.0%
AGAGCTACTAAAAGAAGTCA+AGG + Chr1:11966612-11966631 MsG0180000845.01.T01:CDS 35.0%
AGCTCTTGAAACATTGTCTA+TGG + Chr1:11967103-11967122 MsG0180000845.01.T01:CDS 35.0%
AGGAATGATAGTTAGATTCC+AGG + Chr1:11966346-11966365 MsG0180000845.01.T01:intron 35.0%
AGGGATATGAGAGAATTAGA+GGG + Chr1:11965973-11965992 MsG0180000845.01.T01:intron 35.0%
AGTCCAAATCCATTATTCAG+TGG - Chr1:11968131-11968150 None:intergenic 35.0%
ATACCGTGTGACAAAATAAC+TGG - Chr1:11968988-11969007 None:intergenic 35.0%
ATAGTGAACTCCTTAAACCA+CGG - Chr1:11965204-11965223 None:intergenic 35.0%
ATCAAGGCCCTTAATTAGTT+GGG + Chr1:11965787-11965806 MsG0180000845.01.T01:intron 35.0%
ATCCATTTACATGGAAGATG+AGG + Chr1:11964805-11964824 MsG0180000845.01.T01:CDS 35.0%
ATTGAAATTTGGAAAGCCAC+TGG + Chr1:11963692-11963711 MsG0180000845.01.T01:CDS 35.0%
ATTTGGCTACACCTACAATT+CGG - Chr1:11963930-11963949 None:intergenic 35.0%
CAACCATTGTAGCAATCTAT+TGG - Chr1:11968586-11968605 None:intergenic 35.0%
CAAGCTAAATGATTGTTTCC+TGG + Chr1:11970154-11970173 MsG0180000845.01.T01:intron 35.0%
CACAATGGTAGCAGTAAAAA+TGG + Chr1:11964208-11964227 MsG0180000845.01.T01:intron 35.0%
CAGGAAACAATCATTTAGCT+TGG - Chr1:11970156-11970175 None:intergenic 35.0%
CCAACTCATCCTTATAAATC+CGG + Chr1:11968485-11968504 MsG0180000845.01.T01:intron 35.0%
CCCATTATCATCCATTTACA+TGG + Chr1:11964796-11964815 MsG0180000845.01.T01:CDS 35.0%
CCCTTTCTAAATGATTCTTG+CGG + Chr1:11964715-11964734 MsG0180000845.01.T01:intron 35.0%
CCGCAAGAATCATTTAGAAA+GGG - Chr1:11964718-11964737 None:intergenic 35.0%
CCTTTCTAAATGATTCTTGC+GGG + Chr1:11964716-11964735 MsG0180000845.01.T01:intron 35.0%
CGGATTTATAAGGATGAGTT+GGG - Chr1:11968487-11968506 None:intergenic 35.0%
CTATTGGAGTATGCATCTTT+GGG + Chr1:11966901-11966920 MsG0180000845.01.T01:intron 35.0%
CTCAGAATAACAGCCTTAAA+AGG + Chr1:11963810-11963829 MsG0180000845.01.T01:CDS 35.0%
CTGAGATGTTGCATTTGAAT+TGG - Chr1:11967138-11967157 None:intergenic 35.0%
CTTGTAAGACTTAAGAGGTA+AGG - Chr1:11965575-11965594 None:intergenic 35.0%
GAGAGAATTAGAGGGAATTT+GGG + Chr1:11965981-11966000 MsG0180000845.01.T01:intron 35.0%
GATACACTGAGTAATCGATT+TGG + Chr1:11963874-11963893 MsG0180000845.01.T01:intron 35.0%
GATTGAAGTTGGAAAGCTAT+TGG + Chr1:11967958-11967977 MsG0180000845.01.T01:intron 35.0%
GCAATTGATTAAGACATCCA+GGG - Chr1:11968657-11968676 None:intergenic 35.0%
GCCAGTACTTCATTGAAATT+TGG + Chr1:11963681-11963700 MsG0180000845.01.T01:CDS 35.0%
GCCTTATCTGTAATCTATGT+GGG + Chr1:11968549-11968568 MsG0180000845.01.T01:intron 35.0%
GCTACTAAAAAAGTCAAGGT+TGG + Chr1:11970226-11970245 MsG0180000845.01.T01:intron 35.0%
GGAAATCTGGAGAATACTTA+CGG - Chr1:11964671-11964690 None:intergenic 35.0%
GGTTGCATTAAAATGGCATT+TGG + Chr1:11968601-11968620 MsG0180000845.01.T01:intron 35.0%
GTAGAAAGAAACTTACGGAT+TGG - Chr1:11962893-11962912 None:intergenic 35.0%
GTATTCTCCAGATTTCCTTT+CGG + Chr1:11964674-11964693 MsG0180000845.01.T01:intron 35.0%
GTCCTTTATTGTTAATGGAG+AGG + Chr1:11964375-11964394 MsG0180000845.01.T01:intron 35.0%
GTGTGTGCAGAATCAATAAT+AGG - Chr1:11966059-11966078 None:intergenic 35.0%
TATTGGAGTATGCATCTTTG+GGG + Chr1:11966902-11966921 MsG0180000845.01.T01:intron 35.0%
TCAAAACCATCATAGCAAAC+AGG - Chr1:11967338-11967357 None:intergenic 35.0%
TCATCCAAAGAGATTAATGG+TGG + Chr1:11963752-11963771 MsG0180000845.01.T01:CDS 35.0%
TCCATTATTCAGTGGAACAT+AGG - Chr1:11968123-11968142 None:intergenic 35.0%
TCCCACATAGATTACAGATA+AGG - Chr1:11968553-11968572 None:intergenic 35.0%
TCCTATGTTCCACTGAATAA+TGG + Chr1:11968119-11968138 MsG0180000845.01.T01:intron 35.0%
TCTTAATGTAGTCCAAGCAT+GGG - Chr1:11969539-11969558 None:intergenic 35.0%
TCTTATCTTTCCGTGGTTTA+AGG + Chr1:11965191-11965210 MsG0180000845.01.T01:CDS 35.0%
TGAGAGAATTAGAGGGAATT+TGG + Chr1:11965980-11965999 MsG0180000845.01.T01:intron 35.0%
TGCAATTGATTAAGACATCC+AGG - Chr1:11968658-11968677 None:intergenic 35.0%
TGGATGTAATTCTCTCATAG+AGG + Chr1:11966971-11966990 MsG0180000845.01.T01:intron 35.0%
TGGTAGTCCCAACTAATTAA+GGG - Chr1:11965797-11965816 None:intergenic 35.0%
TGGTCATCCAAAGAGATTAA+TGG + Chr1:11963749-11963768 MsG0180000845.01.T01:CDS 35.0%
TGTAGGTGTAGCCAAATAAT+GGG + Chr1:11963933-11963952 MsG0180000845.01.T01:intron 35.0%
TGTAGTTGTAGCGAGATAAT+GGG + Chr1:11968184-11968203 MsG0180000845.01.T01:intron 35.0%
TGTGAACAAGTTAACATCTG+CGG + Chr1:11963571-11963590 MsG0180000845.01.T01:CDS 35.0%
TGTGGCTATTTGTTCATTCA+TGG + Chr1:11969373-11969392 MsG0180000845.01.T01:intron 35.0%
TTAAGAAACTTGTCTTACCG+TGG + Chr1:11969553-11969572 MsG0180000845.01.T01:CDS 35.0%
TTACATCTTTATTGGAGCTC+AGG + Chr1:11966254-11966273 MsG0180000845.01.T01:intron 35.0%
TTCCAACTTCAATCATGTAG+CGG - Chr1:11967952-11967971 None:intergenic 35.0%
TTCGTTGATCTATTCCCATT+TGG - Chr1:11968912-11968931 None:intergenic 35.0%
TTCTCTGTCAATTAAGTGAG+AGG + Chr1:11966326-11966345 MsG0180000845.01.T01:intron 35.0%
TTCTTAATGTAGTCCAAGCA+TGG - Chr1:11969540-11969559 None:intergenic 35.0%
TTGAAATTTGGAAAGCCACT+GGG + Chr1:11963693-11963712 MsG0180000845.01.T01:CDS 35.0%
TTGAACTATGTAGTCTGTCA+GGG + Chr1:11966561-11966580 MsG0180000845.01.T01:intron 35.0%
TTGAAGTGTGTGTAAAAGTG+TGG - Chr1:11969996-11970015 None:intergenic 35.0%
TTGCTTGAACTATCTTTGGT+GGG - Chr1:11965146-11965165 None:intergenic 35.0%
TTGTAGGTGTAGCCAAATAA+TGG + Chr1:11963932-11963951 MsG0180000845.01.T01:intron 35.0%
TTTAATGACTTCGACAAAGC+TGG - Chr1:11969832-11969851 None:intergenic 35.0%
TTTGCTTGAACTATCTTTGG+TGG - Chr1:11965147-11965166 None:intergenic 35.0%
! AAGAGAGGTTTGAGATTGTT+AGG + Chr1:11963008-11963027 MsG0180000845.01.T01:CDS 35.0%
! ATAAATCCGGCTTTTAGATG+AGG + Chr1:11968498-11968517 MsG0180000845.01.T01:intron 35.0%
! CCCATTATCATGCATTTTCA+TGG + Chr1:11969142-11969161 MsG0180000845.01.T01:CDS 35.0%
! CTCAGAAGTTTAGTCTTCAA+AGG + Chr1:11968076-11968095 MsG0180000845.01.T01:CDS 35.0%
! GAAACCTGACAATCCTTTTA+AGG - Chr1:11963826-11963845 None:intergenic 35.0%
! GAGGAAAAGTTGAGTTTTTG+TGG + Chr1:11967995-11968014 MsG0180000845.01.T01:CDS 35.0%
! GAGGGAAAGTTGAATTTTTG+TGG + Chr1:11963729-11963748 MsG0180000845.01.T01:CDS 35.0%
! GATTTGGTACTGAGTTTGAA+GGG + Chr1:11967550-11967569 MsG0180000845.01.T01:intron 35.0%
! TAAATCCGGCTTTTAGATGA+GGG + Chr1:11968499-11968518 MsG0180000845.01.T01:intron 35.0%
! TCAAAATATGGGTTGCTGAT+TGG + Chr1:11963603-11963622 MsG0180000845.01.T01:CDS 35.0%
! TGATTTTCAGACATGTTACC+TGG + Chr1:11969083-11969102 MsG0180000845.01.T01:intron 35.0%
! TTAGTCTTCAAAGGATTCTC+AGG + Chr1:11968085-11968104 MsG0180000845.01.T01:CDS 35.0%
! TTGGTTGCTGACTATGAAAT+CGG + Chr1:11969781-11969800 MsG0180000845.01.T01:CDS 35.0%
! TTGGTTGTTGACTATGAAAG+CGG + Chr1:11965446-11965465 MsG0180000845.01.T01:CDS 35.0%
!! GAATATTTGAGAAGTACCAG+CGG - Chr1:11968230-11968249 None:intergenic 35.0%
!! GTTCAAAAGCTTTGAAGAGT+TGG + Chr1:11965427-11965446 MsG0180000845.01.T01:CDS 35.0%
!! GTTCCACTGAATAATGGATT+TGG + Chr1:11968125-11968144 MsG0180000845.01.T01:intron 35.0%
!! TGAATTTGTCTTTGGTTTGC+AGG + Chr1:11970327-11970346 MsG0180000845.01.T01:intron 35.0%
!! TGATTTGGTACTGAGTTTGA+AGG + Chr1:11967549-11967568 MsG0180000845.01.T01:intron 35.0%
!!! CTATGATGGTTTTGAACCTT+CGG + Chr1:11967343-11967362 MsG0180000845.01.T01:intron 35.0%
!!! TATGATGGTTTTGAACCTTC+GGG + Chr1:11967344-11967363 MsG0180000845.01.T01:intron 35.0%
!!! TGCTGACATTTTTTTCTTCC+AGG + Chr1:11968267-11968286 MsG0180000845.01.T01:CDS 35.0%
!!! TTTTGGTTCTTCCGAATTGT+AGG + Chr1:11963916-11963935 MsG0180000845.01.T01:intron 35.0%
AAATCTGCACTGTACGTACT+AGG + Chr1:11965597-11965616 MsG0180000845.01.T01:intron 40.0%
AAATTCTCAATTCTGGCCCA+AGG - Chr1:11966081-11966100 None:intergenic 40.0%
AACAATGTTCATATAGGCCC+AGG + Chr1:11968385-11968404 MsG0180000845.01.T01:intron 40.0%
AAGTTGGAAAGCTATTGGGA+TGG + Chr1:11967963-11967982 MsG0180000845.01.T01:intron 40.0%
ACAGCCTTAAAAGGATTGTC+AGG + Chr1:11963819-11963838 MsG0180000845.01.T01:CDS 40.0%
ACATTAGCCGAAAGGAAATC+TGG - Chr1:11964684-11964703 None:intergenic 40.0%
ACTTTGACAAAGCCAGTTTG+AGG - Chr1:11965490-11965509 None:intergenic 40.0%
AGAAAATGGTAAACTGCACC+TGG - Chr1:11964034-11964053 None:intergenic 40.0%
AGAATTAGAGGGAATTTGGG+AGG + Chr1:11965984-11966003 MsG0180000845.01.T01:intron 40.0%
AGCTCCACCATTAATCTCTT+TGG - Chr1:11963759-11963778 None:intergenic 40.0%
ATAGGTCGACATTTGCCAAA+TGG + Chr1:11968894-11968913 MsG0180000845.01.T01:intron 40.0%
ATATAGTGCTTTACTGGAGG+AGG - Chr1:11966186-11966205 None:intergenic 40.0%
ATCGGATGTACTCTAAGCAT+GGG - Chr1:11965170-11965189 None:intergenic 40.0%
ATCTCGCTACAACTACAGTT+TGG - Chr1:11968181-11968200 None:intergenic 40.0%
ATTGGAGTATGCATCTTTGG+GGG + Chr1:11966903-11966922 MsG0180000845.01.T01:intron 40.0%
CAGATATAGTGCTTTACTGG+AGG - Chr1:11966189-11966208 None:intergenic 40.0%
CAGGGAACCAATATCAATAG+GGG + Chr1:11967064-11967083 MsG0180000845.01.T01:intron 40.0%
CATTTACATGGAAGATGAGG+AGG + Chr1:11964808-11964827 MsG0180000845.01.T01:CDS 40.0%
CCACAGAAACCTAAGCATAA+AGG - Chr1:11966377-11966396 None:intergenic 40.0%
CCAGGGAACCAATATCAATA+GGG + Chr1:11967063-11967082 MsG0180000845.01.T01:intron 40.0%
CCCGCAAGAATCATTTAGAA+AGG - Chr1:11964719-11964738 None:intergenic 40.0%
CCGGATTTATAAGGATGAGT+TGG - Chr1:11968488-11968507 None:intergenic 40.0%
CCTTTATGCTTAGGTTTCTG+TGG + Chr1:11966374-11966393 MsG0180000845.01.T01:intron 40.0%
CTCCTCATCTTCCATGTAAA+TGG - Chr1:11964810-11964829 None:intergenic 40.0%
CTGGTAGTCCCAACTAATTA+AGG - Chr1:11965798-11965817 None:intergenic 40.0%
CTGTAGTTGTAGCGAGATAA+TGG + Chr1:11968183-11968202 MsG0180000845.01.T01:intron 40.0%
CTTGAACTATGTAGTCTGTC+AGG + Chr1:11966560-11966579 MsG0180000845.01.T01:intron 40.0%
GAAAAAAAGTGAACCGTACC+TGG - Chr1:11968288-11968307 None:intergenic 40.0%
GAAAGCTATTGGGATGGATA+TGG + Chr1:11967969-11967988 MsG0180000845.01.T01:CDS 40.0%
GAATTAGAGGGAATTTGGGA+GGG + Chr1:11965985-11966004 MsG0180000845.01.T01:intron 40.0%
GACAACAACTATTGAGTCAG+TGG - Chr1:11967044-11967063 None:intergenic 40.0%
GACTCAATAGTTGTTGTCCA+GGG + Chr1:11967046-11967065 MsG0180000845.01.T01:intron 40.0%
GATCAAGGCCCTTAATTAGT+TGG + Chr1:11965786-11965805 MsG0180000845.01.T01:intron 40.0%
GCAAATGACAACTACAGATG+AGG - Chr1:11968837-11968856 None:intergenic 40.0%
GGGTTGTCGAGTCAAAATAT+GGG + Chr1:11963592-11963611 MsG0180000845.01.T01:CDS 40.0%
GGTAGGCAATCTTTATACTC+AGG + Chr1:11965618-11965637 MsG0180000845.01.T01:intron 40.0%
GTAGGCCTCAAATCAGAAAA+TGG - Chr1:11964048-11964067 None:intergenic 40.0%
GTGAACAAGTTAACATCTGC+GGG + Chr1:11963572-11963591 MsG0180000845.01.T01:CDS 40.0%
GTGGTTTAACGAGTTTACTG+TGG + Chr1:11969572-11969591 MsG0180000845.01.T01:CDS 40.0%
GTGGTTTAAGGAGTTCACTA+TGG + Chr1:11965203-11965222 MsG0180000845.01.T01:CDS 40.0%
GTTCACTTCGTCCCATTATT+TGG - Chr1:11963947-11963966 None:intergenic 40.0%
TAATTAGTTGGGACTACCAG+AGG + Chr1:11965798-11965817 MsG0180000845.01.T01:intron 40.0%
TAGGTCGACATTTGCCAAAT+GGG + Chr1:11968895-11968914 MsG0180000845.01.T01:intron 40.0%
TATCGGATGTACTCTAAGCA+TGG - Chr1:11965171-11965190 None:intergenic 40.0%
TCCAGGGAACCAATATCAAT+AGG + Chr1:11967062-11967081 MsG0180000845.01.T01:intron 40.0%
TCCGATATCTTATCTTTCCG+TGG + Chr1:11965184-11965203 MsG0180000845.01.T01:CDS 40.0%
TCGAATTTCTGCAATGTTGC+AGG + Chr1:11962972-11962991 MsG0180000845.01.T01:intron 40.0%
TCTGCTTCCCCTATTGATAT+TGG - Chr1:11967074-11967093 None:intergenic 40.0%
TGACTCAATAGTTGTTGTCC+AGG + Chr1:11967045-11967064 MsG0180000845.01.T01:intron 40.0%
TGAGCTATATCCAACACAAG+CGG - Chr1:11968060-11968079 None:intergenic 40.0%
TGAGCTATATCTAACACACG+AGG - Chr1:11963794-11963813 None:intergenic 40.0%
TGGCAACTATAGATGAGACT+AGG - Chr1:11964490-11964509 None:intergenic 40.0%
TTACATAATGGCGCCCTTAT+AGG + Chr1:11964133-11964152 MsG0180000845.01.T01:intron 40.0%
TTGGGCCAGAATTGAGAATT+TGG + Chr1:11966080-11966099 MsG0180000845.01.T01:intron 40.0%
TTTACTGGAGGAGGTAATGA+TGG - Chr1:11966177-11966196 None:intergenic 40.0%
TTTGTGCTTCCGTTCATTCT+AGG + Chr1:11969737-11969756 MsG0180000845.01.T01:intron 40.0%
! AAAGCTGGTTTAAGATCAGC+TGG - Chr1:11969817-11969836 None:intergenic 40.0%
! AAATCCGGCTTTTAGATGAG+GGG + Chr1:11968500-11968519 MsG0180000845.01.T01:intron 40.0%
! AATAATGGGACGAAGTGAAC+AGG + Chr1:11963947-11963966 MsG0180000845.01.T01:CDS 40.0%
! ATGCATTTTCATGGAAGACG+AGG + Chr1:11969151-11969170 MsG0180000845.01.T01:CDS 40.0%
! ATTGATTCTGCACACACCTT+GGG + Chr1:11966062-11966081 MsG0180000845.01.T01:intron 40.0%
! GAGGAGGTATGTTGCTAATA+GGG + Chr1:11969170-11969189 MsG0180000845.01.T01:intron 40.0%
! GGATTTTCAGACATGTTACC+TGG + Chr1:11964737-11964756 MsG0180000845.01.T01:intron 40.0%
! GGCCTTATCTGTAATCTATG+TGG + Chr1:11968548-11968567 MsG0180000845.01.T01:intron 40.0%
! GGGTTTGCTTGAACTATCTT+TGG - Chr1:11965150-11965169 None:intergenic 40.0%
! GTGCTATGTTTTTCTGTTGC+AGG + Chr1:11967223-11967242 MsG0180000845.01.T01:intron 40.0%
! TGCTGACATATTTTTCCTCC+AGG + Chr1:11964013-11964032 MsG0180000845.01.T01:CDS 40.0%
! TTTGAGACTGTGAAGAGTGT+TGG + Chr1:11967258-11967277 MsG0180000845.01.T01:CDS 40.0%
!! AATGTTTTTACACATGCCGC+AGG - Chr1:11966939-11966958 None:intergenic 40.0%
!! TATTGATTCTGCACACACCT+TGG + Chr1:11966061-11966080 MsG0180000845.01.T01:intron 40.0%
!! TTGAGACTGTGAAGAGTGTT+GGG + Chr1:11967259-11967278 MsG0180000845.01.T01:CDS 40.0%
!!! ATGATGGTTTTGAACCTTCG+GGG + Chr1:11967345-11967364 MsG0180000845.01.T01:intron 40.0%
!!! CAGCAATCACTATTTTGACC+CGG - Chr1:11967869-11967888 None:intergenic 40.0%
AAATGGTAAACTGCACCTGG+AGG - Chr1:11964031-11964050 None:intergenic 45.0%
AAGGAGTTCACTATGGAGTG+TGG + Chr1:11965210-11965229 MsG0180000845.01.T01:CDS 45.0%
AATTTGGAAAGCCACTGGGA+TGG + Chr1:11963697-11963716 MsG0180000845.01.T01:CDS 45.0%
AGACTAACCACAACCATCCT+GGG - Chr1:11968405-11968424 None:intergenic 45.0%
AGCAAACAGGATCAGCTTGT+TGG - Chr1:11967325-11967344 None:intergenic 45.0%
AGGAGTTCACTATGGAGTGT+GGG + Chr1:11965211-11965230 MsG0180000845.01.T01:CDS 45.0%
AGTGAACATGAAGAATCCGC+TGG + Chr1:11968211-11968230 MsG0180000845.01.T01:CDS 45.0%
ATGTCAGCACATTGCATGCA+TGG - Chr1:11968256-11968275 None:intergenic 45.0%
ATGTTACCTGGTCTGCAACA+AGG + Chr1:11964749-11964768 MsG0180000845.01.T01:CDS 45.0%
ATGTTCATATAGGCCCAGGA+TGG + Chr1:11968389-11968408 MsG0180000845.01.T01:intron 45.0%
ATTGGGATGGATATGGAAGG+AGG + Chr1:11967976-11967995 MsG0180000845.01.T01:CDS 45.0%
CAGGCACTACCTTTATGCTT+AGG + Chr1:11966365-11966384 MsG0180000845.01.T01:intron 45.0%
CATCTTTATTGGAGCTCAGG+TGG + Chr1:11966257-11966276 MsG0180000845.01.T01:intron 45.0%
CATTCCCAATTGGCAGATGT+CGG - Chr1:11964568-11964587 None:intergenic 45.0%
CGGGTTGTCGAGTCAAAATA+TGG + Chr1:11963591-11963610 MsG0180000845.01.T01:CDS 45.0%
CTAAGCATAAAGGTAGTGCC+TGG - Chr1:11966367-11966386 None:intergenic 45.0%
CTCAGGACTGAAACGATGAA+TGG + Chr1:11965635-11965654 MsG0180000845.01.T01:intron 45.0%
GAAAGACTAAAACGGCGAAG+AGG + Chr1:11965926-11965945 MsG0180000845.01.T01:intron 45.0%
GCTATTGGGATGGATATGGA+AGG + Chr1:11967973-11967992 MsG0180000845.01.T01:CDS 45.0%
GGCAACACTTCAAACGAACA+AGG + Chr1:11970193-11970212 MsG0180000845.01.T01:intron 45.0%
GTGAACAAGCTAGTATCTGC+TGG + Chr1:11967840-11967859 MsG0180000845.01.T01:intron 45.0%
TAGACTAACCACAACCATCC+TGG - Chr1:11968406-11968425 None:intergenic 45.0%
TGACAACTACAGATGAGGCT+AGG - Chr1:11968832-11968851 None:intergenic 45.0%
TGTCAGGGAACACTTTCGAA+AGG + Chr1:11966576-11966595 MsG0180000845.01.T01:CDS 45.0%
TGTTACCTGGTCTGCAACAA+GGG + Chr1:11964750-11964769 MsG0180000845.01.T01:CDS 45.0%
TTCGCTGATCCATTCCCAAT+TGG - Chr1:11964578-11964597 None:intergenic 45.0%
! ACCAGGTAATGAGCTGATTC+AGG + Chr1:11966753-11966772 MsG0180000845.01.T01:intron 45.0%
! ATGGTGGAGCTGATAAGTAC+TGG + Chr1:11963768-11963787 MsG0180000845.01.T01:CDS 45.0%
! CAATAGTTCTGCTGAGCTGT+AGG + Chr1:11967749-11967768 MsG0180000845.01.T01:intron 45.0%
! CATTTTCATGGAAGACGAGG+AGG + Chr1:11969154-11969173 MsG0180000845.01.T01:CDS 45.0%
! CGAGGAGGTATGTTGCTAAT+AGG + Chr1:11969169-11969188 MsG0180000845.01.T01:intron 45.0%
! GAGGAGGTATGCTGCTAATA+AGG + Chr1:11964824-11964843 MsG0180000845.01.T01:intron 45.0%
! GCTTGTTGGCAAGGATGTTA+AGG - Chr1:11967311-11967330 None:intergenic 45.0%
! TGTTGACTATGAAAGCGGAG+AGG + Chr1:11965451-11965470 MsG0180000845.01.T01:CDS 45.0%
!! AAGAGGAAGGTTAGCCTGTT+AGG + Chr1:11965943-11965962 MsG0180000845.01.T01:intron 45.0%
!! CCCTATTGATATTGGTTCCC+TGG - Chr1:11967066-11967085 None:intergenic 45.0%
!! CGTTTGAAGTGTTGCCTTAC+AGG - Chr1:11970189-11970208 None:intergenic 45.0%
!! GCTGATCCTGTTTGCTATGA+TGG + Chr1:11967329-11967348 MsG0180000845.01.T01:intron 45.0%
!! GGTCATTGAGTGTTGAAGAG+AGG + Chr1:11962993-11963012 MsG0180000845.01.T01:intron 45.0%
!! TGAGACTGTGAAGAGTGTTG+GGG + Chr1:11967260-11967279 MsG0180000845.01.T01:CDS 45.0%
!!! TACGACGGTTTTGAACCTTC+TGG + Chr1:11963103-11963122 MsG0180000845.01.T01:CDS 45.0%
!! TTAATAACAATTAAATTAAA+TGG - Chr1:11966803-11966822 None:intergenic 5.0%
AAGTCAAGGTTGGGCTCGTT+TGG + Chr1:11970236-11970255 MsG0180000845.01.T01:intron 50.0%
ACATCCAGAGGACCTCAAAC+TGG + Chr1:11965475-11965494 MsG0180000845.01.T01:CDS 50.0%
ACATCCCTCGTGAGCCTATA+AGG - Chr1:11964150-11964169 None:intergenic 50.0%
ATAGGCCGACATCTGCCAAT+TGG + Chr1:11964560-11964579 MsG0180000845.01.T01:intron 50.0%
ATATAGGCCCAGGATGGTTG+TGG + Chr1:11968395-11968414 MsG0180000845.01.T01:intron 50.0%
ATCTTCTCTTGCCCTTGCTG+TGG - Chr1:11969110-11969129 None:intergenic 50.0%
ATGGAGTGTGGGGCAGATAA+TGG + Chr1:11965222-11965241 MsG0180000845.01.T01:CDS 50.0%
ATGTCAGCACACTGCATGCA+TGG - Chr1:11964002-11964021 None:intergenic 50.0%
ATGTTACCTGGTCCACAGCA+AGG + Chr1:11969095-11969114 MsG0180000845.01.T01:CDS 50.0%
ATTGGAGCTCAGGTGGTAAG+TGG + Chr1:11966264-11966283 MsG0180000845.01.T01:intron 50.0%
CACGGTATGCATTCTTCTCC+TGG + Chr1:11969000-11969019 MsG0180000845.01.T01:intron 50.0%
CATCCCTCGTGAGCCTATAA+GGG - Chr1:11964149-11964168 None:intergenic 50.0%
CGACATCTGCCAATTGGGAA+TGG + Chr1:11964566-11964585 MsG0180000845.01.T01:CDS 50.0%
CTGCACTGTACGTACTAGGT+AGG + Chr1:11965601-11965620 MsG0180000845.01.T01:intron 50.0%
GACTAAAACGGCGAAGAGGA+AGG + Chr1:11965930-11965949 MsG0180000845.01.T01:intron 50.0%
GAGGCTAACACACTCTGATG+TGG + Chr1:11965839-11965858 MsG0180000845.01.T01:intron 50.0%
GCAATGTGCATTCGTCCAGA+AGG - Chr1:11963121-11963140 None:intergenic 50.0%
GCCTGAATCAGCTCATTACC+TGG - Chr1:11966757-11966776 None:intergenic 50.0%
GGAGTTCACTATGGAGTGTG+GGG + Chr1:11965212-11965231 MsG0180000845.01.T01:CDS 50.0%
GGCCGCTACATGATTGAAGT+TGG + Chr1:11967947-11967966 MsG0180000845.01.T01:intron 50.0%
GTGGTCCTCAAAAGAGATCG+AGG + Chr1:11968014-11968033 MsG0180000845.01.T01:CDS 50.0%
GTGTGTTGTGTGTGTGTGTG+TGG - Chr1:11969970-11969989 None:intergenic 50.0%
GTTCTGCTGAGCTGTAGGTA+AGG + Chr1:11967754-11967773 MsG0180000845.01.T01:intron 50.0%
TAGCCTGTTAGGCGAGGAAA+GGG + Chr1:11965954-11965973 MsG0180000845.01.T01:intron 50.0%
TAGGCCGACATCTGCCAATT+GGG + Chr1:11964561-11964580 MsG0180000845.01.T01:intron 50.0%
TATCCCTTTCCTCGCCTAAC+AGG - Chr1:11965960-11965979 None:intergenic 50.0%
TCCTTCGAAATCCATCCCAG+TGG - Chr1:11963711-11963730 None:intergenic 50.0%
TGCACTGTTCTCAACTCCTG+AGG + Chr1:11967175-11967194 MsG0180000845.01.T01:intron 50.0%
TGGACGAATGCACATTGCTC+AGG + Chr1:11963123-11963142 MsG0180000845.01.T01:CDS 50.0%
TGTTACCTGGTCCACAGCAA+GGG + Chr1:11969096-11969115 MsG0180000845.01.T01:CDS 50.0%
TTAGCCTGTTAGGCGAGGAA+AGG + Chr1:11965953-11965972 MsG0180000845.01.T01:intron 50.0%
TTCCCTCGGCAATCTTTGGT+GGG - Chr1:11969515-11969534 None:intergenic 50.0%
TTGAAGAGGTTCTGCGTCTC+CGG - Chr1:11962845-11962864 None:intergenic 50.0%
TTTCCCTCGGCAATCTTTGG+TGG - Chr1:11969516-11969535 None:intergenic 50.0%
! AAAGCCAGTTTGAGGTCCTC+TGG - Chr1:11965482-11965501 None:intergenic 50.0%
! ACTGGGATGGATTTCGAAGG+AGG + Chr1:11963710-11963729 MsG0180000845.01.T01:CDS 50.0%
! AGCTAGTATCTGCTGGTTGC+CGG + Chr1:11967847-11967866 MsG0180000845.01.T01:intron 50.0%
! AGTGTGGGGCAGATAATGGT+GGG + Chr1:11965226-11965245 MsG0180000845.01.T01:CDS 50.0%
! CTGGGATGGATTTCGAAGGA+GGG + Chr1:11963711-11963730 MsG0180000845.01.T01:CDS 50.0%
! TCTGGCCTCGATCTCTTTTG+AGG - Chr1:11968022-11968041 None:intergenic 50.0%
!! ACAGGATCAGCTTGTTGGCA+AGG - Chr1:11967320-11967339 None:intergenic 50.0%
!! GAGCGTAGTGCTGATAATGG+TGG + Chr1:11969594-11969613 MsG0180000845.01.T01:CDS 50.0%
!! GTGGAGCGTAGTGCTGATAA+TGG + Chr1:11969591-11969610 MsG0180000845.01.T01:CDS 50.0%
ACTACCAGAGGAGAGCAAGG+GGG + Chr1:11965810-11965829 MsG0180000845.01.T01:intron 55.0%
AGGCCAGAGCTGACGAGTAT+TGG + Chr1:11968034-11968053 MsG0180000845.01.T01:CDS 55.0%
CCTGGAACATGCAGCCTGTA+AGG + Chr1:11970172-11970191 MsG0180000845.01.T01:intron 55.0%
CCTTACAGGCTGCATGTTCC+AGG - Chr1:11970175-11970194 None:intergenic 55.0%
GACTACCAGAGGAGAGCAAG+GGG + Chr1:11965809-11965828 MsG0180000845.01.T01:intron 55.0%
GCAATGTTCATTCGCCCCGA+AGG - Chr1:11967362-11967381 None:intergenic 55.0%
GGACTACCAGAGGAGAGCAA+GGG + Chr1:11965808-11965827 MsG0180000845.01.T01:intron 55.0%
GGCACCCCTCATCTAAAAGC+CGG - Chr1:11968507-11968526 None:intergenic 55.0%
GGGGCGAATGAACATTGCTC+AGG + Chr1:11967364-11967383 MsG0180000845.01.T01:intron 55.0%
GGGTTTCCCTCGGCAATCTT+TGG - Chr1:11969519-11969538 None:intergenic 55.0%
GTCCAAGCATGGGTTTCCCT+CGG - Chr1:11969529-11969548 None:intergenic 55.0%
TCTGTTGCAGGTCGTTGCAG+AGG + Chr1:11967235-11967254 MsG0180000845.01.T01:intron 55.0%
TCTTGCCCTTGTTGCAGACC+AGG - Chr1:11964758-11964777 None:intergenic 55.0%
TGCAGGCTTACAGAGTCACC+AGG + Chr1:11966736-11966755 MsG0180000845.01.T01:intron 55.0%
TGCCCACCAAAGATTGCCGA+GGG + Chr1:11969510-11969529 MsG0180000845.01.T01:CDS 55.0%
TGTTCAGTTGCTCACAGCCC+TGG + Chr1:11968637-11968656 MsG0180000845.01.T01:intron 55.0%
TTGCCCACCAAAGATTGCCG+AGG + Chr1:11969509-11969528 MsG0180000845.01.T01:CDS 55.0%
! AAGCGGAGAGGTACATCCAG+AGG + Chr1:11965463-11965482 MsG0180000845.01.T01:CDS 55.0%
! GAGTGTGGGGCAGATAATGG+TGG + Chr1:11965225-11965244 MsG0180000845.01.T01:CDS 55.0%
! GCCACTGGGATGGATTTCGA+AGG + Chr1:11963707-11963726 MsG0180000845.01.T01:CDS 55.0%
! GCTAGTATCTGCTGGTTGCC+GGG + Chr1:11967848-11967867 MsG0180000845.01.T01:intron 55.0%
! TGGGGAAGAGTGCACTCAAG+AGG + Chr1:11967278-11967297 MsG0180000845.01.T01:CDS 55.0%
! TGGGGGTGTGTTGAATCCTG+CGG + Chr1:11966920-11966939 MsG0180000845.01.T01:intron 55.0%
!! CGAGTATTGGCCGCTTGTGT+TGG + Chr1:11968047-11968066 MsG0180000845.01.T01:CDS 55.0%
!! GAAGGTTAGCCTGTTAGGCG+AGG + Chr1:11965948-11965967 MsG0180000845.01.T01:intron 55.0%
CATTCCCCCTTGCTCTCCTC+TGG - Chr1:11965817-11965836 None:intergenic 60.0%
CGGCCAATACTCGTCAGCTC+TGG - Chr1:11968040-11968059 None:intergenic 60.0%
GAGAGCAAGGGGGAATGCAG+AGG + Chr1:11965820-11965839 MsG0180000845.01.T01:intron 60.0%
GAGGGAATTTGGGAGGGAGC+TGG + Chr1:11965991-11966010 MsG0180000845.01.T01:intron 60.0%
GCGCCCTTATAGGCTCACGA+GGG + Chr1:11964143-11964162 MsG0180000845.01.T01:intron 60.0%
GGGACTACCAGAGGAGAGCA+AGG + Chr1:11965807-11965826 MsG0180000845.01.T01:intron 60.0%
TGCCGAGGGAAACCCATGCT+TGG + Chr1:11969524-11969543 MsG0180000845.01.T01:CDS 60.0%
! TCTTGCCCTTGCTGTGGACC+AGG - Chr1:11969104-11969123 None:intergenic 60.0%
GGCGCCCTTATAGGCTCACG+AGG + Chr1:11964142-11964161 MsG0180000845.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 11962838 11970369 11962838 ID=MsG0180000845.01;Name=MsG0180000845.01
Chr1 mRNA 11962838 11970369 11962838 ID=MsG0180000845.01.T01;Parent=MsG0180000845.01;Name=MsG0180000845.01.T01;_AED=0.37;_eAED=0.38;_QI=0|0.22|0.15|1|1|1|19|0|667
Chr1 exon 11962838 11962896 11962838 ID=MsG0180000845.01.T01:exon:499;Parent=MsG0180000845.01.T01
Chr1 exon 11962994 11963144 11962994 ID=MsG0180000845.01.T01:exon:498;Parent=MsG0180000845.01.T01
Chr1 exon 11963551 11963840 11963551 ID=MsG0180000845.01.T01:exon:497;Parent=MsG0180000845.01.T01
Chr1 exon 11963938 11964034 11963938 ID=MsG0180000845.01.T01:exon:496;Parent=MsG0180000845.01.T01
Chr1 exon 11964564 11964669 11964564 ID=MsG0180000845.01.T01:exon:495;Parent=MsG0180000845.01.T01
Chr1 exon 11964747 11964829 11964747 ID=MsG0180000845.01.T01:exon:494;Parent=MsG0180000845.01.T01
Chr1 exon 11965108 11965253 11965108 ID=MsG0180000845.01.T01:exon:493;Parent=MsG0180000845.01.T01
Chr1 exon 11965424 11965529 11965424 ID=MsG0180000845.01.T01:exon:492;Parent=MsG0180000845.01.T01
Chr1 exon 11966574 11966633 11966574 ID=MsG0180000845.01.T01:exon:491;Parent=MsG0180000845.01.T01
Chr1 exon 11966741 11966757 11966741 ID=MsG0180000845.01.T01:exon:490;Parent=MsG0180000845.01.T01
Chr1 exon 11967067 11967159 11967067 ID=MsG0180000845.01.T01:exon:489;Parent=MsG0180000845.01.T01
Chr1 exon 11967245 11967337 11967245 ID=MsG0180000845.01.T01:exon:488;Parent=MsG0180000845.01.T01
Chr1 exon 11967966 11968106 11967966 ID=MsG0180000845.01.T01:exon:487;Parent=MsG0180000845.01.T01
Chr1 exon 11968189 11968288 11968189 ID=MsG0180000845.01.T01:exon:486;Parent=MsG0180000845.01.T01
Chr1 exon 11968898 11969003 11968898 ID=MsG0180000845.01.T01:exon:485;Parent=MsG0180000845.01.T01
Chr1 exon 11969093 11969175 11969093 ID=MsG0180000845.01.T01:exon:484;Parent=MsG0180000845.01.T01
Chr1 exon 11969477 11969622 11969477 ID=MsG0180000845.01.T01:exon:483;Parent=MsG0180000845.01.T01
Chr1 exon 11969759 11969864 11969759 ID=MsG0180000845.01.T01:exon:482;Parent=MsG0180000845.01.T01
Chr1 exon 11970349 11970369 11970349 ID=MsG0180000845.01.T01:exon:481;Parent=MsG0180000845.01.T01
Chr1 CDS 11962838 11962896 11962838 ID=MsG0180000845.01.T01:cds;Parent=MsG0180000845.01.T01
Chr1 CDS 11962994 11963144 11962994 ID=MsG0180000845.01.T01:cds;Parent=MsG0180000845.01.T01
Chr1 CDS 11963551 11963840 11963551 ID=MsG0180000845.01.T01:cds;Parent=MsG0180000845.01.T01
Chr1 CDS 11963938 11964034 11963938 ID=MsG0180000845.01.T01:cds;Parent=MsG0180000845.01.T01
Chr1 CDS 11964564 11964669 11964564 ID=MsG0180000845.01.T01:cds;Parent=MsG0180000845.01.T01
Chr1 CDS 11964747 11964829 11964747 ID=MsG0180000845.01.T01:cds;Parent=MsG0180000845.01.T01
Chr1 CDS 11965108 11965253 11965108 ID=MsG0180000845.01.T01:cds;Parent=MsG0180000845.01.T01
Chr1 CDS 11965424 11965529 11965424 ID=MsG0180000845.01.T01:cds;Parent=MsG0180000845.01.T01
Chr1 CDS 11966574 11966633 11966574 ID=MsG0180000845.01.T01:cds;Parent=MsG0180000845.01.T01
Chr1 CDS 11966741 11966757 11966741 ID=MsG0180000845.01.T01:cds;Parent=MsG0180000845.01.T01
Chr1 CDS 11967067 11967159 11967067 ID=MsG0180000845.01.T01:cds;Parent=MsG0180000845.01.T01
Chr1 CDS 11967245 11967337 11967245 ID=MsG0180000845.01.T01:cds;Parent=MsG0180000845.01.T01
Chr1 CDS 11967966 11968106 11967966 ID=MsG0180000845.01.T01:cds;Parent=MsG0180000845.01.T01
Chr1 CDS 11968189 11968288 11968189 ID=MsG0180000845.01.T01:cds;Parent=MsG0180000845.01.T01
Chr1 CDS 11968898 11969003 11968898 ID=MsG0180000845.01.T01:cds;Parent=MsG0180000845.01.T01
Chr1 CDS 11969093 11969175 11969093 ID=MsG0180000845.01.T01:cds;Parent=MsG0180000845.01.T01
Chr1 CDS 11969477 11969622 11969477 ID=MsG0180000845.01.T01:cds;Parent=MsG0180000845.01.T01
Chr1 CDS 11969759 11969864 11969759 ID=MsG0180000845.01.T01:cds;Parent=MsG0180000845.01.T01
Chr1 CDS 11970349 11970369 11970349 ID=MsG0180000845.01.T01:cds;Parent=MsG0180000845.01.T01
Gene Sequence

>MsG0180000845.01.T01

ATGGCCGGAGACGCAGAACCTCTTCAATCATCAGATTCAAACGTAGAAACAACCAATCCGTCATTGAGTGTTGAAGAGAGGTTTGAGATTGTTAGGAGTATTGGTGAAGAGTGTATTCAAGATGATGAACTCTTTAGTCTCCTTGCTAACAAGAAAGATATTGTTTGTTACGACGGTTTTGAACCTTCTGGACGAATGCACATTGCTCAGGGTATTTTGAAAGCAATTAATGTGAACAAGTTAACATCTGCGGGTTGTCGAGTCAAAATATGGGTTGCTGATTGGTTTGCTAAGTTGAACAATAAAATGGGAGGAGATTTAAACAAAATTGAGACGGTTGGCCAGTACTTCATTGAAATTTGGAAAGCCACTGGGATGGATTTCGAAGGAGGGAAAGTTGAATTTTTGTGGTCATCCAAAGAGATTAATGGTGGAGCTGATAAGTACTGGCCTCGTGTGTTAGATATAGCTCAGAATAACAGCCTTAAAAGGATTGTCAGGTGTAGCCAAATAATGGGACGAAGTGAACAGGAAGATTTGACCGCTTCTCAAATATTCTATCCATGCATGCAGTGTGCTGACATATTTTTCCTCCAGGCCGACATCTGCCAATTGGGAATGGATCAGCGAAAAGTAAATGTTCTTGCCAGAGAGTATTGTGATGTTATTAAGAGGAGAAACAAACCTATAATATTGTCACACCACATGTTACCTGGTCTGCAACAAGGGCAAGAGAAGATGTCAAAAAGCAACCCATTATCATCCATTTACATGGAAGATGAGGAGGCTGAAGTGAATATGAAAATAGAAAAGGCATATTGCCCACCAAAGATAGTTCAAGCAAACCCATGCTTAGAGTACATCCGATATCTTATCTTTCCGTGGTTTAAGGAGTTCACTATGGAGTGTGGGGCAGATAATGGTGGGAATAAGACGTTCAAAAGCTTTGAAGAGTTGGTTGTTGACTATGAAAGCGGAGAGGTACATCCAGAGGACCTCAAACTGGCTTTGTCAAAGTCATTGAATAAAATTCTAGAGTCTGTCAGGGAACACTTTCGAAAGGACAAGAATGCTAAAGAGCTACTAAAAGAAGTCAAGGCTTACAGAGTCACCAGGGAACCAATATCAATAGGGGAAGCAGAAGACGCAGAAGCTCTTGAAACATTGTCTATGGATGAATCGTCCAATTCAAATGCAACATCTCAGCAGTCGTTGCAGAGGTTTGAGACTGTGAAGAGTGTTGGGGAAGAGTGCACTCAAGAGGACGAGCTCCTTAACATCCTTGCCAACAAGCTGATCCTTTGGAAAGCTATTGGGATGGATATGGAAGGAGGAAAAGTTGAGTTTTTGTGGTCCTCAAAAGAGATCGAGGCCAGAGCTGACGAGTATTGGCCGCTTGTGTTGGATATAGCTCAGAAGTTTAGTCTTCAAAGGATTCTCAGTTGTAGCGAGATAATGGGACGAAGTGAACATGAAGAATCCGCTGGTACTTCTCAAATATTCTATCCATGCATGCAATGTGCTGACATTTTTTTCTTCCAGGTCGACATTTGCCAAATGGGAATAGATCAACGAAAAGTGAATGTGCTTGCGAGAGATTATTGTGATATTATTAAGAGGAAGAACAAACCAGTTATTTTGTCACACGACATGTTACCTGGTCCACAGCAAGGGCAAGAGAAGATGTCAAAAAGTGACCCATTATCATGCATTTTCATGGAAGACGAGGAGGCTGAAGTGAATGTGAAAATAAAAAAGGCTTATTGCCCACCAAAGATTGCCGAGGGAAACCCATGCTTGGACTACATTAAGAAACTTGTCTTACCGTGGTTTAACGAGTTTACTGTGGAGCGTAGTGCTGATAATGGTGGAAATAAGACTTTCAAAAGCTTTGAAGAATTGGTTGCTGACTATGAAATCGGAGAGTTGCATCCAGCTGATCTTAAACCAGCTTTGTCGAAGTCATTAAATAAAATTCTAGAGGCTTACAAAATCACCAAGTAA
Protein sequence

>MsG0180000845.01.T01

MAGDAEPLQSSDSNVETTNPSLSVEERFEIVRSIGEECIQDDELFSLLANKKDIVCYDGFEPSGRMHIAQGILKAINVNKLTSAGCRVKIWVADWFAKLNNKMGGDLNKIETVGQYFIEIWKATGMDFEGGKVEFLWSSKEINGGADKYWPRVLDIAQNNSLKRIVRCSQIMGRSEQEDLTASQIFYPCMQCADIFFLQADICQLGMDQRKVNVLAREYCDVIKRRNKPIILSHHMLPGLQQGQEKMSKSNPLSSIYMEDEEAEVNMKIEKAYCPPKIVQANPCLEYIRYLIFPWFKEFTMECGADNGGNKTFKSFEELVVDYESGEVHPEDLKLALSKSLNKILESVREHFRKDKNAKELLKEVKAYRVTREPISIGEAEDAEALETLSMDESSNSNATSQQSLQRFETVKSVGEECTQEDELLNILANKLILWKAIGMDMEGGKVEFLWSSKEIEARADEYWPLVLDIAQKFSLQRILSCSEIMGRSEHEESAGTSQIFYPCMQCADIFFFQVDICQMGIDQRKVNVLARDYCDIIKRKNKPVILSHDMLPGPQQGQEKMSKSDPLSCIFMEDEEAEVNVKIKKAYCPPKIAEGNPCLDYIKKLVLPWFNEFTVERSADNGGNKTFKSFEELVADYEIGELHPADLKPALSKSLNKILEAYKITK*