Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004326.01.T01 | XP_013468807.1 | 97.568 | 329 | 6 | 1 | 1 | 329 | 1 | 327 | 0 | 665 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004326.01.T01 | Q9SZB9 | 69.909 | 329 | 95 | 2 | 1 | 329 | 1 | 325 | 2.34E-169 | 476 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004326.01.T01 | A0A072VLG5 | 97.568 | 329 | 6 | 1 | 1 | 329 | 1 | 327 | 0.0 | 665 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080049045.01 | MsG0180004326.01 | 0.829803 | 4.195193e-55 | 4.340394e-52 |
| MsG0180004121.01 | MsG0180004326.01 | 0.808390 | 3.170964e-50 | 1.810856e-47 |
| MsG0180004202.01 | MsG0180004326.01 | 0.987593 | 8.030666e-171 | 4.232145e-164 |
| MsG0180004326.01 | MsG0180005127.01 | 0.820365 | 7.127717e-53 | 5.628497e-50 |
| MsG0180004326.01 | MsG0180005146.01 | 0.825182 | 5.389660e-54 | 4.877296e-51 |
| MsG0180004326.01 | MsG0180006183.01 | 0.821530 | 3.845625e-53 | 3.136531e-50 |
| MsG0180004326.01 | MsG0180006253.01 | 0.805772 | 1.136154e-49 | 6.062858e-47 |
| MsG0180004326.01 | MsG0380015557.01 | 0.812259 | 4.637832e-51 | 2.934770e-48 |
| MsG0180004326.01 | MsG0380017200.01 | 0.801680 | 8.033381e-49 | 3.859776e-46 |
| MsG0180004326.01 | MsG0380017901.01 | 0.806845 | 6.748128e-50 | 3.701295e-47 |
| MsG0180004326.01 | MsG0480020797.01 | 0.816021 | 6.853889e-52 | 4.801594e-49 |
| MsG0180004326.01 | MsG0480022244.01 | -0.800494 | 1.403532e-48 | 6.544550e-46 |
| MsG0180004326.01 | MsG0480023454.01 | 0.811900 | 5.554594e-51 | 3.480507e-48 |
| MsG0180004326.01 | MsG0580029158.01 | 0.801551 | 8.535803e-49 | 4.087939e-46 |
| MsG0180004326.01 | MsG0580030141.01 | 0.811309 | 7.465699e-51 | 4.605389e-48 |
| MsG0180004326.01 | MsG0780041062.01 | 0.801518 | 8.668760e-49 | 4.148308e-46 |
| MsG0180004326.01 | MsG0880043495.01 | 0.826976 | 2.018554e-54 | 1.922623e-51 |
| MsG0180004326.01 | MsG0880044712.01 | 0.805801 | 1.120114e-49 | 5.981677e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0180000723.01 | MsG0180004326.01 | PPI |
| MsG0180000029.01 | MsG0180004326.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004326.01.T01 | MTR_1g077000 | 97.568 | 329 | 6 | 1 | 1 | 329 | 1 | 327 | 0.0 | 665 |
| MsG0180004326.01.T01 | MTR_0155s0040 | 63.291 | 316 | 115 | 1 | 14 | 329 | 1 | 315 | 3.51e-149 | 422 |
| MsG0180004326.01.T01 | MTR_5g022870 | 46.462 | 325 | 156 | 4 | 14 | 329 | 1 | 316 | 1.68e-101 | 301 |
| MsG0180004326.01.T01 | MTR_8g075100 | 48.505 | 301 | 142 | 3 | 38 | 329 | 23 | 319 | 2.13e-97 | 291 |
| MsG0180004326.01.T01 | MTR_1g025980 | 45.820 | 323 | 157 | 5 | 12 | 325 | 1 | 314 | 1.93e-95 | 286 |
| MsG0180004326.01.T01 | MTR_1g101830 | 47.651 | 298 | 145 | 3 | 41 | 329 | 27 | 322 | 9.53e-94 | 281 |
| MsG0180004326.01.T01 | MTR_3g092990 | 46.512 | 301 | 149 | 5 | 41 | 329 | 26 | 326 | 1.01e-86 | 264 |
| MsG0180004326.01.T01 | MTR_3g094650 | 42.331 | 326 | 170 | 6 | 11 | 329 | 8 | 322 | 1.54e-85 | 261 |
| MsG0180004326.01.T01 | MTR_4g046713 | 44.000 | 300 | 157 | 3 | 41 | 329 | 27 | 326 | 5.56e-85 | 259 |
| MsG0180004326.01.T01 | MTR_1g086320 | 43.807 | 331 | 170 | 8 | 14 | 329 | 4 | 333 | 5.87e-85 | 259 |
| MsG0180004326.01.T01 | MTR_3g072190 | 45.578 | 294 | 154 | 5 | 41 | 329 | 26 | 318 | 1.06e-83 | 256 |
| MsG0180004326.01.T01 | MTR_7g107520 | 41.304 | 322 | 175 | 6 | 18 | 329 | 3 | 320 | 4.48e-83 | 254 |
| MsG0180004326.01.T01 | MTR_5g074970 | 41.420 | 338 | 177 | 6 | 1 | 329 | 1 | 326 | 4.01e-82 | 252 |
| MsG0180004326.01.T01 | MTR_1g086490 | 41.765 | 340 | 175 | 8 | 12 | 329 | 2 | 340 | 4.15e-82 | 253 |
| MsG0180004326.01.T01 | MTR_7g072510 | 43.131 | 313 | 169 | 6 | 22 | 329 | 4 | 312 | 6.38e-82 | 251 |
| MsG0180004326.01.T01 | MTR_4g122640 | 41.791 | 335 | 181 | 7 | 9 | 329 | 2 | 336 | 1.11e-81 | 251 |
| MsG0180004326.01.T01 | MTR_7g026990 | 42.947 | 319 | 177 | 4 | 15 | 329 | 5 | 322 | 1.19e-81 | 251 |
| MsG0180004326.01.T01 | MTR_1g115900 | 41.159 | 328 | 176 | 8 | 12 | 329 | 1 | 321 | 1.00e-80 | 249 |
| MsG0180004326.01.T01 | MTR_3g466200 | 42.056 | 321 | 167 | 6 | 17 | 329 | 11 | 320 | 1.45e-80 | 248 |
| MsG0180004326.01.T01 | MTR_7g086820 | 42.857 | 294 | 162 | 3 | 41 | 329 | 20 | 312 | 1.56e-80 | 248 |
| MsG0180004326.01.T01 | MTR_7g086870 | 42.373 | 295 | 163 | 3 | 39 | 329 | 20 | 311 | 2.28e-80 | 247 |
| MsG0180004326.01.T01 | MTR_5g074760 | 44.631 | 298 | 155 | 7 | 41 | 329 | 25 | 321 | 1.76e-79 | 245 |
| MsG0180004326.01.T01 | MTR_5g083860 | 43.919 | 296 | 158 | 5 | 41 | 329 | 31 | 325 | 2.20e-79 | 245 |
| MsG0180004326.01.T01 | MTR_1g038680 | 44.554 | 303 | 151 | 8 | 43 | 329 | 31 | 332 | 2.58e-79 | 245 |
| MsG0180004326.01.T01 | MTR_3g466180 | 44.127 | 315 | 163 | 6 | 20 | 329 | 17 | 323 | 3.37e-79 | 244 |
| MsG0180004326.01.T01 | MTR_3g094670 | 41.566 | 332 | 176 | 6 | 5 | 329 | 2 | 322 | 3.92e-79 | 244 |
| MsG0180004326.01.T01 | MTR_5g017850 | 42.000 | 300 | 163 | 4 | 41 | 329 | 27 | 326 | 4.53e-79 | 244 |
| MsG0180004326.01.T01 | MTR_5g074740 | 43.624 | 298 | 158 | 7 | 41 | 329 | 25 | 321 | 1.38e-78 | 243 |
| MsG0180004326.01.T01 | MTR_7g072480 | 41.846 | 325 | 173 | 6 | 10 | 329 | 3 | 316 | 1.93e-78 | 242 |
| MsG0180004326.01.T01 | MTR_2g088770 | 40.199 | 301 | 167 | 6 | 41 | 329 | 26 | 325 | 2.98e-78 | 242 |
| MsG0180004326.01.T01 | MTR_5g017860 | 41.000 | 300 | 166 | 4 | 41 | 329 | 27 | 326 | 7.73e-78 | 241 |
| MsG0180004326.01.T01 | MTR_2g029560 | 41.391 | 302 | 164 | 5 | 41 | 329 | 24 | 325 | 3.75e-77 | 240 |
| MsG0180004326.01.T01 | MTR_5g074860 | 43.098 | 297 | 159 | 7 | 41 | 328 | 29 | 324 | 4.15e-77 | 239 |
| MsG0180004326.01.T01 | MTR_7g093370 | 41.584 | 303 | 163 | 6 | 41 | 329 | 69 | 371 | 2.04e-76 | 239 |
| MsG0180004326.01.T01 | MTR_1g054205 | 42.295 | 305 | 162 | 6 | 39 | 329 | 22 | 326 | 2.86e-76 | 237 |
| MsG0180004326.01.T01 | MTR_5g049280 | 42.623 | 305 | 159 | 7 | 41 | 329 | 33 | 337 | 4.07e-76 | 237 |
| MsG0180004326.01.T01 | MTR_2g084080 | 38.941 | 321 | 187 | 6 | 14 | 329 | 1 | 317 | 4.27e-76 | 236 |
| MsG0180004326.01.T01 | MTR_2g029730 | 41.060 | 302 | 165 | 5 | 41 | 329 | 25 | 326 | 5.29e-76 | 237 |
| MsG0180004326.01.T01 | MTR_4g030890 | 42.809 | 299 | 159 | 5 | 41 | 329 | 100 | 396 | 7.33e-76 | 239 |
| MsG0180004326.01.T01 | MTR_4g029170 | 40.741 | 297 | 168 | 6 | 40 | 329 | 26 | 321 | 2.01e-75 | 235 |
| MsG0180004326.01.T01 | MTR_4g031140 | 42.140 | 299 | 161 | 5 | 41 | 329 | 28 | 324 | 2.10e-75 | 235 |
| MsG0180004326.01.T01 | MTR_4g029180 | 41.638 | 293 | 163 | 6 | 44 | 329 | 30 | 321 | 2.81e-75 | 234 |
| MsG0180004326.01.T01 | MTR_6g027440 | 39.812 | 319 | 175 | 4 | 17 | 329 | 7 | 314 | 4.22e-75 | 234 |
| MsG0180004326.01.T01 | MTR_6g043280 | 40.816 | 294 | 169 | 3 | 40 | 329 | 40 | 332 | 4.83e-75 | 234 |
| MsG0180004326.01.T01 | MTR_4g029190 | 43.299 | 291 | 159 | 4 | 45 | 329 | 50 | 340 | 6.49e-75 | 234 |
| MsG0180004326.01.T01 | MTR_5g074710 | 41.946 | 298 | 163 | 7 | 41 | 329 | 25 | 321 | 9.40e-75 | 233 |
| MsG0180004326.01.T01 | MTR_1g022970 | 42.244 | 303 | 162 | 6 | 40 | 329 | 45 | 347 | 1.72e-74 | 233 |
| MsG0180004326.01.T01 | MTR_5g016010 | 41.722 | 302 | 162 | 5 | 41 | 328 | 27 | 328 | 2.43e-74 | 232 |
| MsG0180004326.01.T01 | MTR_4g029200 | 43.434 | 297 | 156 | 6 | 41 | 329 | 46 | 338 | 3.68e-74 | 232 |
| MsG0180004326.01.T01 | MTR_8g062780 | 42.809 | 299 | 158 | 5 | 44 | 329 | 26 | 324 | 4.03e-74 | 232 |
| MsG0180004326.01.T01 | MTR_2g028980 | 39.697 | 330 | 181 | 7 | 18 | 329 | 1 | 330 | 4.48e-74 | 232 |
| MsG0180004326.01.T01 | MTR_5g014100 | 43.137 | 306 | 157 | 7 | 41 | 329 | 26 | 331 | 8.07e-74 | 231 |
| MsG0180004326.01.T01 | MTR_3g092990 | 43.522 | 301 | 147 | 6 | 41 | 329 | 26 | 315 | 9.88e-74 | 230 |
| MsG0180004326.01.T01 | MTR_3g094630 | 43.243 | 296 | 160 | 5 | 41 | 329 | 28 | 322 | 1.12e-73 | 230 |
| MsG0180004326.01.T01 | MTR_2g084090 | 40.068 | 292 | 168 | 6 | 44 | 329 | 28 | 318 | 1.50e-73 | 230 |
| MsG0180004326.01.T01 | MTR_1g090760 | 39.697 | 330 | 179 | 8 | 14 | 329 | 7 | 330 | 1.57e-73 | 230 |
| MsG0180004326.01.T01 | MTR_6g043460 | 42.414 | 290 | 163 | 2 | 40 | 325 | 35 | 324 | 1.84e-73 | 231 |
| MsG0180004326.01.T01 | MTR_5g021060 | 40.984 | 305 | 168 | 6 | 37 | 329 | 26 | 330 | 2.03e-73 | 230 |
| MsG0180004326.01.T01 | MTR_2g008710 | 39.216 | 306 | 170 | 5 | 37 | 329 | 23 | 325 | 2.58e-73 | 229 |
| MsG0180004326.01.T01 | MTR_2g029850 | 37.500 | 336 | 191 | 6 | 7 | 329 | 1 | 330 | 3.23e-73 | 230 |
| MsG0180004326.01.T01 | MTR_7g029030 | 38.066 | 331 | 186 | 7 | 7 | 329 | 1 | 320 | 5.23e-73 | 228 |
| MsG0180004326.01.T01 | MTR_6g043240 | 41.216 | 296 | 163 | 6 | 40 | 329 | 41 | 331 | 6.16e-73 | 229 |
| MsG0180004326.01.T01 | MTR_2g084110 | 40.893 | 291 | 166 | 5 | 44 | 329 | 28 | 317 | 3.72e-72 | 226 |
| MsG0180004326.01.T01 | MTR_2g437770 | 40.203 | 296 | 166 | 4 | 41 | 329 | 50 | 341 | 4.11e-72 | 227 |
| MsG0180004326.01.T01 | MTR_4g083710 | 39.252 | 321 | 186 | 5 | 18 | 329 | 4 | 324 | 1.62e-71 | 225 |
| MsG0180004326.01.T01 | MTR_8g076820 | 41.118 | 304 | 167 | 6 | 38 | 329 | 27 | 330 | 4.62e-71 | 224 |
| MsG0180004326.01.T01 | MTR_2g029750 | 40.064 | 312 | 172 | 7 | 32 | 329 | 20 | 330 | 6.52e-71 | 224 |
| MsG0180004326.01.T01 | MTR_2g029820 | 38.585 | 311 | 178 | 6 | 32 | 329 | 20 | 330 | 6.04e-70 | 222 |
| MsG0180004326.01.T01 | MTR_3g072190 | 47.012 | 251 | 127 | 5 | 84 | 329 | 2 | 251 | 8.40e-70 | 218 |
| MsG0180004326.01.T01 | MTR_2g040000 | 42.857 | 301 | 154 | 8 | 45 | 329 | 33 | 331 | 9.17e-70 | 221 |
| MsG0180004326.01.T01 | MTR_2g029815 | 36.795 | 337 | 191 | 7 | 6 | 329 | 3 | 330 | 1.23e-69 | 221 |
| MsG0180004326.01.T01 | MTR_4g125940 | 40.000 | 325 | 174 | 8 | 20 | 329 | 11 | 329 | 1.35e-69 | 220 |
| MsG0180004326.01.T01 | MTR_2g029800 | 36.923 | 325 | 192 | 6 | 18 | 329 | 6 | 330 | 1.70e-69 | 221 |
| MsG0180004326.01.T01 | MTR_2g084010 | 38.272 | 324 | 186 | 8 | 14 | 329 | 1 | 318 | 2.50e-69 | 219 |
| MsG0180004326.01.T01 | MTR_4g095450 | 39.796 | 294 | 168 | 5 | 41 | 325 | 27 | 320 | 2.54e-69 | 219 |
| MsG0180004326.01.T01 | MTR_2g084020 | 39.726 | 292 | 169 | 6 | 44 | 329 | 28 | 318 | 2.55e-69 | 219 |
| MsG0180004326.01.T01 | MTR_2g029740 | 37.386 | 329 | 187 | 8 | 19 | 329 | 3 | 330 | 3.57e-69 | 220 |
| MsG0180004326.01.T01 | MTR_2g029860 | 38.079 | 302 | 174 | 5 | 41 | 329 | 29 | 330 | 4.10e-69 | 219 |
| MsG0180004326.01.T01 | MTR_4g114210 | 38.019 | 313 | 177 | 4 | 31 | 329 | 11 | 320 | 8.69e-69 | 218 |
| MsG0180004326.01.T01 | MTR_4g087965 | 40.244 | 328 | 177 | 9 | 17 | 325 | 15 | 342 | 6.49e-68 | 216 |
| MsG0180004326.01.T01 | MTR_4g074995 | 41.077 | 297 | 155 | 6 | 41 | 329 | 24 | 308 | 7.96e-68 | 215 |
| MsG0180004326.01.T01 | MTR_1g009750 | 36.697 | 327 | 185 | 7 | 17 | 329 | 10 | 328 | 1.64e-67 | 214 |
| MsG0180004326.01.T01 | MTR_3g467600 | 40.134 | 299 | 168 | 8 | 41 | 329 | 27 | 324 | 2.88e-67 | 214 |
| MsG0180004326.01.T01 | MTR_2g029830 | 37.987 | 308 | 178 | 6 | 35 | 329 | 22 | 329 | 3.25e-67 | 215 |
| MsG0180004326.01.T01 | MTR_2g029910 | 36.810 | 326 | 192 | 5 | 18 | 329 | 7 | 332 | 6.18e-67 | 214 |
| MsG0180004326.01.T01 | MTR_0286s0010 | 39.934 | 303 | 166 | 6 | 41 | 329 | 34 | 334 | 1.42e-66 | 213 |
| MsG0180004326.01.T01 | MTR_6g008075 | 39.934 | 303 | 166 | 6 | 41 | 329 | 34 | 334 | 1.42e-66 | 213 |
| MsG0180004326.01.T01 | MTR_4g133800 | 37.966 | 295 | 173 | 3 | 42 | 329 | 42 | 333 | 5.84e-66 | 211 |
| MsG0180004326.01.T01 | MTR_2g084000 | 36.000 | 325 | 193 | 8 | 14 | 329 | 1 | 319 | 1.12e-65 | 209 |
| MsG0180004326.01.T01 | MTR_4g074990 | 36.875 | 320 | 179 | 5 | 18 | 329 | 1 | 305 | 6.39e-64 | 205 |
| MsG0180004326.01.T01 | MTR_4g127670 | 38.284 | 303 | 170 | 6 | 41 | 329 | 24 | 323 | 8.93e-64 | 205 |
| MsG0180004326.01.T01 | MTR_4g132490 | 36.533 | 323 | 194 | 5 | 18 | 329 | 5 | 327 | 5.47e-63 | 203 |
| MsG0180004326.01.T01 | MTR_4g125940 | 41.971 | 274 | 142 | 7 | 71 | 329 | 3 | 274 | 1.16e-62 | 201 |
| MsG0180004326.01.T01 | MTR_2g067440 | 32.425 | 367 | 196 | 7 | 2 | 328 | 32 | 386 | 1.39e-61 | 201 |
| MsG0180004326.01.T01 | MTR_3g105790 | 36.036 | 333 | 187 | 7 | 12 | 329 | 1 | 322 | 3.86e-61 | 198 |
| MsG0180004326.01.T01 | MTR_5g033470 | 37.459 | 307 | 176 | 6 | 39 | 329 | 71 | 377 | 5.54e-61 | 199 |
| MsG0180004326.01.T01 | MTR_2g077990 | 35.135 | 333 | 174 | 6 | 38 | 328 | 73 | 405 | 1.71e-59 | 196 |
| MsG0180004326.01.T01 | MTR_4g074980 | 38.488 | 291 | 156 | 5 | 41 | 329 | 25 | 294 | 3.13e-59 | 192 |
| MsG0180004326.01.T01 | MTR_1g009750 | 34.769 | 325 | 177 | 8 | 17 | 329 | 10 | 311 | 5.24e-59 | 192 |
| MsG0180004326.01.T01 | MTR_2g008160 | 37.748 | 302 | 173 | 7 | 41 | 329 | 24 | 323 | 6.64e-59 | 192 |
| MsG0180004326.01.T01 | MTR_2g078610 | 34.627 | 335 | 173 | 7 | 38 | 328 | 73 | 405 | 1.88e-58 | 194 |
| MsG0180004326.01.T01 | MTR_2g099175 | 37.954 | 303 | 171 | 4 | 41 | 329 | 36 | 335 | 3.32e-58 | 191 |
| MsG0180004326.01.T01 | MTR_4g132110 | 34.694 | 294 | 184 | 3 | 40 | 325 | 31 | 324 | 1.37e-57 | 189 |
| MsG0180004326.01.T01 | MTR_4g074980 | 39.453 | 256 | 139 | 5 | 14 | 261 | 6 | 253 | 9.57e-56 | 182 |
| MsG0180004326.01.T01 | MTR_5g074860 | 37.037 | 297 | 138 | 7 | 41 | 328 | 29 | 285 | 9.76e-56 | 183 |
| MsG0180004326.01.T01 | MTR_4g132110 | 34.114 | 299 | 184 | 4 | 40 | 325 | 31 | 329 | 2.69e-55 | 184 |
| MsG0180004326.01.T01 | MTR_2g078280 | 34.591 | 318 | 166 | 6 | 38 | 313 | 73 | 390 | 1.00e-54 | 183 |
| MsG0180004326.01.T01 | MTR_0147s0010 | 34.906 | 318 | 164 | 6 | 41 | 328 | 77 | 381 | 2.11e-54 | 182 |
| MsG0180004326.01.T01 | MTR_2g008730 | 34.098 | 305 | 161 | 5 | 38 | 329 | 24 | 301 | 3.31e-52 | 174 |
| MsG0180004326.01.T01 | MTR_2g029830 | 38.911 | 257 | 144 | 6 | 86 | 329 | 5 | 261 | 6.04e-52 | 173 |
| MsG0180004326.01.T01 | MTR_1g066380 | 31.987 | 297 | 194 | 3 | 41 | 329 | 27 | 323 | 8.18e-52 | 174 |
| MsG0180004326.01.T01 | MTR_1g066710 | 31.650 | 297 | 195 | 3 | 41 | 329 | 27 | 323 | 6.53e-50 | 169 |
| MsG0180004326.01.T01 | MTR_2g008160 | 35.374 | 294 | 156 | 6 | 41 | 329 | 24 | 288 | 2.81e-49 | 166 |
| MsG0180004326.01.T01 | MTR_2g067450 | 34.084 | 311 | 176 | 7 | 38 | 328 | 8 | 309 | 1.59e-48 | 165 |
| MsG0180004326.01.T01 | MTR_1g066640 | 31.313 | 297 | 196 | 3 | 41 | 329 | 27 | 323 | 1.48e-47 | 163 |
| MsG0180004326.01.T01 | MTR_1g066680 | 31.650 | 297 | 194 | 4 | 41 | 329 | 27 | 322 | 4.89e-46 | 159 |
| MsG0180004326.01.T01 | MTR_2g008160 | 43.787 | 169 | 93 | 1 | 36 | 204 | 19 | 185 | 1.35e-44 | 152 |
| MsG0180004326.01.T01 | MTR_5g074700 | 39.013 | 223 | 117 | 7 | 113 | 329 | 5 | 214 | 5.68e-43 | 148 |
| MsG0180004326.01.T01 | MTR_3g105790 | 37.551 | 245 | 135 | 5 | 100 | 329 | 5 | 246 | 4.24e-41 | 144 |
| MsG0180004326.01.T01 | MTR_1g066380 | 31.225 | 253 | 166 | 3 | 85 | 329 | 3 | 255 | 1.85e-39 | 140 |
| MsG0180004326.01.T01 | MTR_3g072210 | 43.011 | 186 | 97 | 7 | 151 | 329 | 55 | 238 | 3.39e-37 | 133 |
| MsG0180004326.01.T01 | MTR_2g029880 | 35.450 | 189 | 106 | 5 | 150 | 329 | 7 | 188 | 7.03e-31 | 116 |
| MsG0180004326.01.T01 | MTR_7g086790 | 40.909 | 154 | 79 | 2 | 88 | 241 | 17 | 158 | 1.42e-30 | 115 |
| MsG0180004326.01.T01 | MTR_3g072260 | 50.000 | 110 | 54 | 1 | 41 | 149 | 26 | 135 | 5.44e-29 | 109 |
| MsG0180004326.01.T01 | MTR_7g072490 | 33.778 | 225 | 95 | 6 | 87 | 309 | 2 | 174 | 5.99e-28 | 108 |
| MsG0180004326.01.T01 | MTR_6g071110 | 61.798 | 89 | 23 | 2 | 109 | 197 | 82 | 159 | 5.50e-27 | 104 |
| MsG0180004326.01.T01 | MTR_1g089005 | 39.416 | 137 | 70 | 2 | 22 | 152 | 3 | 132 | 1.07e-24 | 98.2 |
| MsG0180004326.01.T01 | MTR_2g077980 | 27.915 | 283 | 157 | 8 | 93 | 328 | 1 | 283 | 4.92e-24 | 99.8 |
| MsG0180004326.01.T01 | MTR_2g078560 | 29.204 | 226 | 119 | 5 | 144 | 328 | 94 | 319 | 5.17e-23 | 97.8 |
| MsG0180004326.01.T01 | MTR_5g058120 | 37.662 | 154 | 90 | 3 | 174 | 325 | 6 | 155 | 1.30e-21 | 92.4 |
| MsG0180004326.01.T01 | MTR_4g114220 | 52.439 | 82 | 30 | 2 | 66 | 147 | 28 | 100 | 3.68e-21 | 88.2 |
| MsG0180004326.01.T01 | MTR_6g048160 | 55.882 | 68 | 27 | 1 | 80 | 147 | 22 | 86 | 3.82e-20 | 84.0 |
| MsG0180004326.01.T01 | MTR_3g107060 | 30.859 | 256 | 108 | 9 | 72 | 308 | 105 | 310 | 8.38e-20 | 88.6 |
| MsG0180004326.01.T01 | MTR_7g086810 | 33.898 | 118 | 53 | 1 | 41 | 158 | 6 | 98 | 8.46e-19 | 84.3 |
| MsG0180004326.01.T01 | MTR_1g098320 | 48.611 | 72 | 37 | 0 | 254 | 325 | 49 | 120 | 1.53e-17 | 78.6 |
| MsG0180004326.01.T01 | MTR_3g462850 | 37.589 | 141 | 74 | 5 | 203 | 329 | 9 | 149 | 7.45e-17 | 77.0 |
| MsG0180004326.01.T01 | MTR_7g086785 | 45.205 | 73 | 40 | 0 | 86 | 158 | 3 | 75 | 8.95e-17 | 76.3 |
| MsG0180004326.01.T01 | MTR_4g012865 | 49.254 | 67 | 34 | 0 | 41 | 107 | 77 | 143 | 8.09e-15 | 71.2 |
| MsG0180004326.01.T01 | MTR_3g088160 | 29.389 | 262 | 138 | 11 | 75 | 314 | 121 | 357 | 1.79e-14 | 73.9 |
| MsG0180004326.01.T01 | MTR_3g088160 | 29.389 | 262 | 138 | 11 | 75 | 314 | 121 | 357 | 2.06e-14 | 73.9 |
| MsG0180004326.01.T01 | MTR_4g073410 | 27.899 | 276 | 135 | 11 | 53 | 311 | 15 | 243 | 3.51e-14 | 72.0 |
| MsG0180004326.01.T01 | MTR_5g022510 | 27.407 | 270 | 144 | 9 | 53 | 311 | 14 | 242 | 6.31e-14 | 71.2 |
| MsG0180004326.01.T01 | MTR_7g107500 | 40.541 | 74 | 43 | 1 | 256 | 329 | 25 | 97 | 4.36e-13 | 64.7 |
| MsG0180004326.01.T01 | MTR_5g022510 | 28.821 | 229 | 120 | 7 | 87 | 311 | 28 | 217 | 2.24e-12 | 66.6 |
| MsG0180004326.01.T01 | MTR_6g071100 | 50.000 | 62 | 24 | 1 | 153 | 214 | 26 | 80 | 4.36e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004326.01.T01 | AT4G33420 | 69.909 | 329 | 95 | 2 | 1 | 329 | 1 | 325 | 2.39e-170 | 476 |
| MsG0180004326.01.T01 | AT4G33420 | 71.787 | 319 | 86 | 2 | 11 | 329 | 58 | 372 | 1.68e-169 | 476 |
| MsG0180004326.01.T01 | AT5G42180 | 47.315 | 298 | 145 | 3 | 40 | 328 | 22 | 316 | 1.12e-96 | 289 |
| MsG0180004326.01.T01 | AT5G51890 | 44.207 | 328 | 167 | 4 | 12 | 329 | 1 | 322 | 1.66e-94 | 283 |
| MsG0180004326.01.T01 | AT4G11290 | 45.364 | 302 | 152 | 8 | 41 | 329 | 25 | 326 | 1.11e-88 | 269 |
| MsG0180004326.01.T01 | AT1G05260 | 43.636 | 330 | 165 | 7 | 12 | 329 | 5 | 325 | 1.73e-86 | 263 |
| MsG0180004326.01.T01 | AT4G16270 | 47.573 | 309 | 148 | 6 | 33 | 329 | 42 | 348 | 4.23e-85 | 260 |
| MsG0180004326.01.T01 | AT4G36430 | 42.623 | 305 | 163 | 6 | 37 | 329 | 26 | 330 | 3.65e-84 | 258 |
| MsG0180004326.01.T01 | AT3G03670 | 42.475 | 299 | 162 | 4 | 41 | 329 | 23 | 321 | 2.05e-82 | 253 |
| MsG0180004326.01.T01 | AT5G05340 | 41.538 | 325 | 182 | 5 | 12 | 329 | 1 | 324 | 6.02e-80 | 246 |
| MsG0180004326.01.T01 | AT2G35380 | 41.994 | 331 | 168 | 8 | 18 | 329 | 10 | 335 | 2.45e-79 | 245 |
| MsG0180004326.01.T01 | AT1G71695 | 40.741 | 297 | 169 | 4 | 40 | 329 | 43 | 339 | 3.47e-79 | 246 |
| MsG0180004326.01.T01 | AT2G18150 | 38.872 | 337 | 184 | 8 | 14 | 329 | 1 | 336 | 3.53e-79 | 245 |
| MsG0180004326.01.T01 | AT2G18140 | 39.286 | 336 | 183 | 9 | 14 | 329 | 1 | 335 | 5.17e-79 | 244 |
| MsG0180004326.01.T01 | AT1G68850 | 41.617 | 334 | 177 | 9 | 14 | 329 | 2 | 335 | 6.16e-79 | 244 |
| MsG0180004326.01.T01 | AT5G17820 | 42.905 | 296 | 156 | 5 | 41 | 329 | 24 | 313 | 1.90e-78 | 242 |
| MsG0180004326.01.T01 | AT1G44970 | 40.173 | 346 | 179 | 9 | 12 | 329 | 1 | 346 | 8.15e-78 | 242 |
| MsG0180004326.01.T01 | AT3G21770 | 41.751 | 297 | 160 | 6 | 41 | 325 | 29 | 324 | 9.99e-78 | 241 |
| MsG0180004326.01.T01 | AT5G06720 | 39.881 | 336 | 181 | 7 | 12 | 329 | 1 | 333 | 1.03e-77 | 241 |
| MsG0180004326.01.T01 | AT5G06730 | 40.923 | 325 | 174 | 9 | 20 | 329 | 13 | 334 | 2.37e-77 | 241 |
| MsG0180004326.01.T01 | AT5G17820 | 40.606 | 330 | 171 | 7 | 7 | 329 | 55 | 366 | 2.75e-77 | 241 |
| MsG0180004326.01.T01 | AT5G66390 | 40.256 | 313 | 175 | 6 | 29 | 329 | 21 | 333 | 6.74e-77 | 239 |
| MsG0180004326.01.T01 | AT5G64120 | 37.994 | 329 | 192 | 4 | 10 | 329 | 3 | 328 | 9.10e-77 | 238 |
| MsG0180004326.01.T01 | AT3G01190 | 42.244 | 303 | 156 | 6 | 40 | 329 | 25 | 321 | 2.61e-76 | 237 |
| MsG0180004326.01.T01 | AT5G19880 | 41.018 | 334 | 176 | 7 | 12 | 329 | 1 | 329 | 2.92e-76 | 237 |
| MsG0180004326.01.T01 | AT3G28200 | 43.581 | 296 | 160 | 4 | 41 | 329 | 21 | 316 | 3.14e-76 | 237 |
| MsG0180004326.01.T01 | AT5G39580 | 38.154 | 325 | 186 | 5 | 14 | 329 | 1 | 319 | 4.41e-76 | 236 |
| MsG0180004326.01.T01 | AT1G05240 | 40.728 | 302 | 156 | 6 | 41 | 325 | 26 | 321 | 1.20e-75 | 236 |
| MsG0180004326.01.T01 | AT1G05250 | 40.728 | 302 | 156 | 6 | 41 | 325 | 26 | 321 | 1.20e-75 | 236 |
| MsG0180004326.01.T01 | AT5G19890 | 42.378 | 328 | 169 | 8 | 16 | 329 | 6 | 327 | 2.60e-75 | 235 |
| MsG0180004326.01.T01 | AT5G15180 | 39.521 | 334 | 186 | 7 | 7 | 329 | 1 | 329 | 4.86e-75 | 234 |
| MsG0180004326.01.T01 | AT5G58390 | 43.771 | 297 | 158 | 5 | 41 | 329 | 21 | 316 | 1.00e-74 | 233 |
| MsG0180004326.01.T01 | AT1G49570 | 43.042 | 309 | 160 | 7 | 32 | 325 | 39 | 346 | 4.06e-74 | 232 |
| MsG0180004326.01.T01 | AT2G24800 | 40.397 | 302 | 164 | 5 | 41 | 329 | 31 | 329 | 1.61e-73 | 230 |
| MsG0180004326.01.T01 | AT2G22420 | 39.571 | 326 | 177 | 6 | 14 | 329 | 4 | 319 | 2.04e-73 | 230 |
| MsG0180004326.01.T01 | AT3G50990 | 38.393 | 336 | 193 | 6 | 6 | 329 | 8 | 341 | 2.76e-73 | 230 |
| MsG0180004326.01.T01 | AT5G40150 | 42.295 | 305 | 168 | 5 | 33 | 329 | 24 | 328 | 2.80e-73 | 229 |
| MsG0180004326.01.T01 | AT5G58400 | 42.424 | 297 | 162 | 5 | 41 | 329 | 30 | 325 | 3.58e-73 | 229 |
| MsG0180004326.01.T01 | AT4G17690 | 41.751 | 297 | 165 | 4 | 41 | 329 | 26 | 322 | 1.66e-72 | 228 |
| MsG0180004326.01.T01 | AT1G77100 | 38.125 | 320 | 186 | 6 | 18 | 329 | 4 | 319 | 2.28e-72 | 227 |
| MsG0180004326.01.T01 | AT4G26010 | 40.206 | 291 | 169 | 4 | 41 | 329 | 22 | 309 | 2.72e-72 | 226 |
| MsG0180004326.01.T01 | AT4G26010 | 40.206 | 291 | 169 | 4 | 41 | 329 | 50 | 337 | 3.64e-72 | 227 |
| MsG0180004326.01.T01 | AT2G41480 | 41.254 | 303 | 161 | 6 | 41 | 329 | 29 | 328 | 1.43e-71 | 225 |
| MsG0180004326.01.T01 | AT4G31760 | 38.206 | 301 | 171 | 4 | 41 | 329 | 29 | 326 | 2.17e-71 | 224 |
| MsG0180004326.01.T01 | AT1G14540 | 41.554 | 296 | 165 | 6 | 41 | 329 | 21 | 315 | 8.52e-71 | 223 |
| MsG0180004326.01.T01 | AT1G14550 | 40.878 | 296 | 168 | 5 | 41 | 329 | 26 | 321 | 1.02e-70 | 223 |
| MsG0180004326.01.T01 | AT2G38380 | 40.789 | 304 | 164 | 8 | 41 | 329 | 31 | 333 | 1.95e-68 | 218 |
| MsG0180004326.01.T01 | AT4G08770 | 40.789 | 304 | 165 | 6 | 41 | 329 | 24 | 327 | 7.66e-68 | 216 |
| MsG0180004326.01.T01 | AT4G08780 | 40.461 | 304 | 166 | 6 | 41 | 329 | 24 | 327 | 8.08e-68 | 216 |
| MsG0180004326.01.T01 | AT5G47000 | 40.604 | 298 | 168 | 5 | 41 | 329 | 33 | 330 | 1.07e-67 | 215 |
| MsG0180004326.01.T01 | AT5G14130 | 39.203 | 301 | 169 | 6 | 41 | 329 | 32 | 330 | 3.02e-67 | 214 |
| MsG0180004326.01.T01 | AT4G33870 | 36.145 | 332 | 167 | 4 | 41 | 327 | 68 | 399 | 3.29e-67 | 216 |
| MsG0180004326.01.T01 | AT5G14130 | 39.203 | 301 | 169 | 6 | 41 | 329 | 73 | 371 | 4.01e-67 | 215 |
| MsG0180004326.01.T01 | AT2G39040 | 39.423 | 312 | 167 | 8 | 37 | 329 | 42 | 350 | 5.40e-67 | 214 |
| MsG0180004326.01.T01 | AT2G18980 | 38.614 | 303 | 168 | 6 | 41 | 329 | 25 | 323 | 1.70e-66 | 212 |
| MsG0180004326.01.T01 | AT1G34510 | 38.699 | 292 | 172 | 5 | 41 | 329 | 22 | 309 | 2.70e-66 | 211 |
| MsG0180004326.01.T01 | AT4G25980 | 36.957 | 322 | 184 | 7 | 22 | 329 | 10 | 326 | 1.67e-65 | 209 |
| MsG0180004326.01.T01 | AT2G38390 | 39.145 | 304 | 169 | 8 | 41 | 329 | 31 | 333 | 2.69e-65 | 209 |
| MsG0180004326.01.T01 | AT2G34060 | 39.404 | 302 | 167 | 8 | 41 | 326 | 42 | 343 | 4.01e-65 | 209 |
| MsG0180004326.01.T01 | AT3G49110 | 39.474 | 304 | 169 | 6 | 41 | 329 | 33 | 336 | 1.55e-64 | 208 |
| MsG0180004326.01.T01 | AT3G49120 | 39.474 | 304 | 169 | 6 | 41 | 329 | 32 | 335 | 2.12e-64 | 207 |
| MsG0180004326.01.T01 | AT4G37530 | 36.964 | 303 | 177 | 5 | 41 | 329 | 27 | 329 | 5.33e-64 | 206 |
| MsG0180004326.01.T01 | AT4G37520 | 36.964 | 303 | 177 | 5 | 41 | 329 | 27 | 329 | 8.38e-64 | 205 |
| MsG0180004326.01.T01 | AT3G32980 | 39.344 | 305 | 168 | 7 | 41 | 329 | 31 | 334 | 5.12e-63 | 204 |
| MsG0180004326.01.T01 | AT5G64100 | 36.923 | 325 | 189 | 6 | 17 | 329 | 11 | 331 | 1.35e-62 | 202 |
| MsG0180004326.01.T01 | AT3G49960 | 37.954 | 303 | 174 | 6 | 41 | 329 | 27 | 329 | 3.14e-62 | 201 |
| MsG0180004326.01.T01 | AT4G37520 | 36.634 | 303 | 175 | 6 | 41 | 329 | 27 | 326 | 9.61e-62 | 200 |
| MsG0180004326.01.T01 | AT1G30870 | 37.500 | 304 | 178 | 4 | 35 | 329 | 45 | 345 | 1.06e-61 | 200 |
| MsG0180004326.01.T01 | AT5G67400 | 36.170 | 329 | 193 | 6 | 18 | 329 | 1 | 329 | 1.75e-61 | 199 |
| MsG0180004326.01.T01 | AT4G30170 | 35.314 | 303 | 178 | 6 | 41 | 329 | 27 | 325 | 8.73e-61 | 197 |
| MsG0180004326.01.T01 | AT5G22410 | 37.730 | 326 | 183 | 9 | 15 | 326 | 3 | 322 | 2.24e-59 | 194 |
| MsG0180004326.01.T01 | AT5G64110 | 37.710 | 297 | 169 | 7 | 45 | 329 | 38 | 330 | 1.46e-58 | 192 |
| MsG0180004326.01.T01 | AT1G24110 | 37.209 | 301 | 177 | 6 | 41 | 329 | 22 | 322 | 4.16e-57 | 188 |
| MsG0180004326.01.T01 | AT3G17070 | 34.983 | 303 | 184 | 4 | 40 | 329 | 37 | 339 | 1.24e-55 | 184 |
| MsG0180004326.01.T01 | AT4G21960 | 34.228 | 298 | 188 | 3 | 40 | 329 | 30 | 327 | 3.04e-55 | 183 |
| MsG0180004326.01.T01 | AT2G35380 | 42.915 | 247 | 120 | 7 | 102 | 329 | 3 | 247 | 8.83e-55 | 179 |
| MsG0180004326.01.T01 | AT5G24070 | 32.544 | 338 | 200 | 6 | 16 | 329 | 2 | 335 | 5.55e-53 | 177 |
| MsG0180004326.01.T01 | AT4G37530 | 37.500 | 256 | 146 | 5 | 41 | 282 | 27 | 282 | 6.90e-52 | 173 |
| MsG0180004326.01.T01 | AT2G37130 | 32.459 | 305 | 196 | 5 | 35 | 329 | 23 | 327 | 7.29e-51 | 172 |
| MsG0180004326.01.T01 | AT2G43480 | 33.115 | 305 | 184 | 5 | 41 | 329 | 35 | 335 | 1.37e-50 | 171 |
| MsG0180004326.01.T01 | AT2G37130 | 32.095 | 296 | 192 | 4 | 43 | 329 | 1 | 296 | 1.23e-49 | 167 |
| MsG0180004326.01.T01 | AT5G39580 | 40.206 | 194 | 110 | 2 | 14 | 207 | 1 | 188 | 1.13e-46 | 158 |
| MsG0180004326.01.T01 | AT4G25980 | 40.984 | 183 | 103 | 2 | 24 | 206 | 57 | 234 | 2.56e-46 | 159 |
| MsG0180004326.01.T01 | AT2G24800 | 45.455 | 165 | 86 | 2 | 41 | 204 | 31 | 192 | 1.25e-44 | 153 |
| MsG0180004326.01.T01 | AT3G17070 | 31.752 | 274 | 173 | 5 | 69 | 329 | 4 | 276 | 7.24e-40 | 141 |
| MsG0180004326.01.T01 | AT4G32320 | 28.467 | 274 | 127 | 10 | 53 | 308 | 97 | 319 | 5.46e-17 | 80.9 |
| MsG0180004326.01.T01 | AT1G77490 | 29.344 | 259 | 142 | 11 | 75 | 314 | 106 | 342 | 1.37e-15 | 77.4 |
| MsG0180004326.01.T01 | AT1G77490 | 29.344 | 259 | 142 | 11 | 75 | 314 | 106 | 342 | 1.70e-15 | 77.4 |
| MsG0180004326.01.T01 | AT4G35970 | 29.259 | 270 | 138 | 10 | 53 | 311 | 13 | 240 | 3.92e-15 | 74.7 |
| MsG0180004326.01.T01 | AT4G35970 | 29.600 | 250 | 123 | 10 | 53 | 291 | 13 | 220 | 1.35e-12 | 66.6 |
| MsG0180004326.01.T01 | AT3G42570 | 30.556 | 108 | 71 | 2 | 102 | 206 | 43 | 149 | 1.33e-11 | 62.4 |
Find 83 sgRNAs with CRISPR-Local
Find 141 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATCATCTTAAAGCAATTA+AGG | 0.190992 | 1:-76443963 | None:intergenic |
| CTTCCATCCTTTCTACCTTT+AGG | 0.226072 | 1:-76445465 | None:intergenic |
| TTCACAATGTTCCTTGTTCT+TGG | 0.227426 | 1:-76445938 | None:intergenic |
| TTCTATGAAGTCATTGAAAA+TGG | 0.271689 | 1:+76443993 | MsG0180004326.01.T01:CDS |
| CAATTACTTCATATCCTCTT+AGG | 0.281434 | 1:-76445071 | None:intergenic |
| TTTGGATTTGGATTTGGATT+TGG | 0.288868 | 1:+76444069 | MsG0180004326.01.T01:CDS |
| GCAATTAAGGGTATTTATAA+AGG | 0.291314 | 1:-76443950 | None:intergenic |
| TGCCAATTTGGATTTGGATT+TGG | 0.293291 | 1:+76444063 | MsG0180004326.01.T01:CDS |
| ATTACATGCCAATTTGGATT+TGG | 0.293555 | 1:+76444057 | MsG0180004326.01.T01:CDS |
| ATCCAAATCCAAATCCAAAT+TGG | 0.319427 | 1:-76444065 | None:intergenic |
| CCATGGCTTGTTGAAAATCT+AGG | 0.323135 | 1:-76445991 | None:intergenic |
| TTCTGCTGTATTATCCTTAG+TGG | 0.329301 | 1:-76445025 | None:intergenic |
| TCACAATGTTCCTTGTTCTT+GGG | 0.350332 | 1:-76445937 | None:intergenic |
| GAGGTGATTACATGCCAATT+TGG | 0.350555 | 1:+76444051 | MsG0180004326.01.T01:CDS |
| TTATAAAGGAATATAGAGTT+TGG | 0.361060 | 1:-76443936 | None:intergenic |
| CCTCTTAGGCTCAAATTTGC+TGG | 0.368750 | 1:-76445057 | None:intergenic |
| CTATCAAGAACATGTACTTC+TGG | 0.371534 | 1:+76445800 | MsG0180004326.01.T01:CDS |
| TTCACTATGTCCTTAACAAC+TGG | 0.383944 | 1:-76444141 | None:intergenic |
| GGATTTGGATTTGGATTTGG+AGG | 0.385693 | 1:+76444072 | MsG0180004326.01.T01:CDS |
| TATATATAAGCATCACATAT+TGG | 0.400701 | 1:+76446353 | MsG0180004326.01.T01:three_prime_UTR |
| CCAGCAAATTTGAGCCTAAG+AGG | 0.404877 | 1:+76445057 | MsG0180004326.01.T01:CDS |
| TTAACAACTGGTTCAACAAA+AGG | 0.406122 | 1:-76444129 | None:intergenic |
| AAGCCAAGTGGATCCAGCTT+TGG | 0.413980 | 1:+76445757 | MsG0180004326.01.T01:CDS |
| CATCATCTTAAAGCAATTAA+GGG | 0.419174 | 1:-76443962 | None:intergenic |
| TCAACAAGCCATGGTGAAGA+TGG | 0.422355 | 1:+76446000 | MsG0180004326.01.T01:CDS |
| TCCGAGCTCATCACGCAGTT+TGG | 0.424446 | 1:+76445540 | MsG0180004326.01.T01:CDS |
| TGCTCTAAATTGTTTATGTC+GGG | 0.426853 | 1:+76446214 | MsG0180004326.01.T01:three_prime_UTR |
| ATGTGCTGATATTCTTGCTA+TGG | 0.434317 | 1:+76445140 | MsG0180004326.01.T01:CDS |
| TTGGATTTGGATTTGGAGGA+GGG | 0.437592 | 1:+76444076 | MsG0180004326.01.T01:CDS |
| GGACATAGTGAATAGAGCTT+TGG | 0.440304 | 1:+76444152 | MsG0180004326.01.T01:CDS |
| CAAGAGATGGTCGCTCTATC+CGG | 0.442185 | 1:+76445582 | MsG0180004326.01.T01:CDS |
| TAAGGATAATACAGCAGAAA+AGG | 0.444182 | 1:+76445029 | MsG0180004326.01.T01:CDS |
| TTTGGATTTGGATTTGGAGG+AGG | 0.448939 | 1:+76444075 | MsG0180004326.01.T01:CDS |
| TTTGTCCCCTAGGGATGTGA+TGG | 0.449539 | 1:+76444985 | MsG0180004326.01.T01:intron |
| CTTTGGATTCAGAATTTGCC+AGG | 0.451170 | 1:+76445774 | MsG0180004326.01.T01:CDS |
| CTTCCATGACTGCTTCATAC+AGG | 0.455801 | 1:+76444215 | MsG0180004326.01.T01:CDS |
| ATTTGCTCGTACTTCACCAT+TGG | 0.458895 | 1:-76446047 | None:intergenic |
| TCGTTCCTAGTTGCATCAAA+TGG | 0.467823 | 1:-76445839 | None:intergenic |
| CAACAAGCCATGGTGAAGAT+GGG | 0.482582 | 1:+76446001 | MsG0180004326.01.T01:CDS |
| TTGCTCTAAATTGTTTATGT+CGG | 0.484906 | 1:+76446213 | MsG0180004326.01.T01:three_prime_UTR |
| TAACATACCTAAAGGTAGAA+AGG | 0.492130 | 1:+76445458 | MsG0180004326.01.T01:CDS |
| TCTAAATTGTTTATGTCGGG+TGG | 0.501108 | 1:+76446217 | MsG0180004326.01.T01:three_prime_UTR |
| TAAATTGTTTATGTCGGGTG+GGG | 0.505411 | 1:+76446219 | MsG0180004326.01.T01:three_prime_UTR |
| GCAAATTCTGAATCCAAAGC+TGG | 0.507065 | 1:-76445770 | None:intergenic |
| CTAAATTGTTTATGTCGGGT+GGG | 0.521989 | 1:+76446218 | MsG0180004326.01.T01:three_prime_UTR |
| AATTCTGCTTGATTCCACTA+AGG | 0.524922 | 1:+76445011 | MsG0180004326.01.T01:CDS |
| TAACAACTGGTTCAACAAAA+GGG | 0.527365 | 1:-76444128 | None:intergenic |
| TTGTCCCCTAGGGATGTGAT+GGG | 0.528369 | 1:+76444986 | MsG0180004326.01.T01:intron |
| TCAGCACATGAAACCACGCC+AGG | 0.530493 | 1:-76445126 | None:intergenic |
| GAGCTTGAAAACCGATGCCC+TGG | 0.541064 | 1:+76445108 | MsG0180004326.01.T01:CDS |
| CCAGTGTATAACATACCTAA+AGG | 0.544678 | 1:+76445450 | MsG0180004326.01.T01:CDS |
| TTCTTATAAGAGCAGCTGCA+AGG | 0.544991 | 1:-76444188 | None:intergenic |
| AATCTAGGAAGAACATGGCT+TGG | 0.545440 | 1:-76445976 | None:intergenic |
| GATATTAAACAAGGTTCCAA+TGG | 0.546015 | 1:+76446031 | MsG0180004326.01.T01:CDS |
| ATCACGCAGTTTGGTCAACA+TGG | 0.546453 | 1:+76445549 | MsG0180004326.01.T01:CDS |
| ATACCTAAAGGTAGAAAGGA+TGG | 0.552044 | 1:+76445462 | MsG0180004326.01.T01:CDS |
| AGCTCGGATGCATTAAAAGA+AGG | 0.555115 | 1:-76445525 | None:intergenic |
| TTTATTTCAACGCTTTGTTG+AGG | 0.556199 | 1:+76445873 | MsG0180004326.01.T01:CDS |
| TCTTACGTAGAAAACTGCTT+CGG | 0.565409 | 1:-76445169 | None:intergenic |
| TATAAGAGCAGCTGCAAGGG+TGG | 0.568217 | 1:-76444184 | None:intergenic |
| GAACCTGTATGAAGCAGTCA+TGG | 0.568430 | 1:-76444218 | None:intergenic |
| TCTTATAAGAGCAGCTGCAA+GGG | 0.569116 | 1:-76444187 | None:intergenic |
| ACATGTTCTTGATAGTGTCC+TGG | 0.570162 | 1:-76445792 | None:intergenic |
| GAAGTCATTGAAAATGGCAA+TGG | 0.573486 | 1:+76443999 | MsG0180004326.01.T01:CDS |
| AATCCAAAGCTGGATCCACT+TGG | 0.576508 | 1:-76445760 | None:intergenic |
| ACCAAACTGCGTGATGAGCT+CGG | 0.577150 | 1:-76445541 | None:intergenic |
| TTGAAAATCTAGGAAGAACA+TGG | 0.583664 | 1:-76445981 | None:intergenic |
| CCTTTAGGTATGTTATACAC+TGG | 0.588884 | 1:-76445450 | None:intergenic |
| ATGAAACCACGCCAGGGCAT+CGG | 0.597007 | 1:-76445119 | None:intergenic |
| GGTTTGCTTGATATTAAACA+AGG | 0.599211 | 1:+76446022 | MsG0180004326.01.T01:CDS |
| TGAAAACCGATGCCCTGGCG+TGG | 0.606785 | 1:+76445113 | MsG0180004326.01.T01:CDS |
| GATGCATTAAAAGAAGGTGA+TGG | 0.610373 | 1:-76445519 | None:intergenic |
| CAAGAACAGATTAAGCCAAG+TGG | 0.610606 | 1:+76445745 | MsG0180004326.01.T01:CDS |
| ATAAGAGCAGCTGCAAGGGT+GGG | 0.610728 | 1:-76444183 | None:intergenic |
| TATGCAGGGGCACATACACT+AGG | 0.612698 | 1:+76445701 | MsG0180004326.01.T01:intron |
| TACGTAGAAAACTGCTTCGG+TGG | 0.619353 | 1:-76445166 | None:intergenic |
| TCTACTCTAGCCCAAGAACA+AGG | 0.644908 | 1:+76445927 | MsG0180004326.01.T01:CDS |
| CACATACACTAGGAGTGGCA+AGG | 0.657351 | 1:+76445711 | MsG0180004326.01.T01:CDS |
| TATTGAATATTGCAGGCTGG+AGG | 0.657358 | 1:+76445426 | MsG0180004326.01.T01:intron |
| AACAACCATTTGATGCAACT+AGG | 0.664237 | 1:+76445834 | MsG0180004326.01.T01:CDS |
| CAGCACATGAAACCACGCCA+GGG | 0.671985 | 1:-76445125 | None:intergenic |
| AGGGGCACATACACTAGGAG+TGG | 0.676546 | 1:+76445706 | MsG0180004326.01.T01:intron |
| AAGCAAACCCATCTTCACCA+TGG | 0.690111 | 1:-76446008 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTTAAAAATTAATGTTTAA+TGG | + | Chr1:76444344-76444363 | MsG0180004326.01.T01:intron | 10.0% |
| !! | CTTAAAAATTAATGTTTAAT+GGG | + | Chr1:76444345-76444364 | MsG0180004326.01.T01:intron | 10.0% |
| !!! | ATTAAACATTAATTTTTAAG+TGG | - | Chr1:76444345-76444364 | None:intergenic | 10.0% |
| !! | ATATAATAAACTTGTCTTAA+TGG | + | Chr1:76445193-76445212 | MsG0180004326.01.T01:intron | 15.0% |
| !! | ATGATTGATTGATATAAAAT+TGG | + | Chr1:76445367-76445386 | MsG0180004326.01.T01:intron | 15.0% |
| !! | TAACTATATAATGTAGAAAA+TGG | - | Chr1:76444928-76444947 | None:intergenic | 15.0% |
| !! | TGAATTATATATTATATGCA+GGG | + | Chr1:76445687-76445706 | MsG0180004326.01.T01:intron | 15.0% |
| !!! | AAAATGATTAGTTAATTTTG+CGG | - | Chr1:76446075-76446094 | None:intergenic | 15.0% |
| !!! | ATTAACTAATCATTTTGTTA+TGG | + | Chr1:76446079-76446098 | MsG0180004326.01.T01:exon | 15.0% |
| !!! | TTACATTAAATTACTTGTTT+TGG | + | Chr1:76444465-76444484 | MsG0180004326.01.T01:intron | 15.0% |
| !!! | TTTTTGTTTATCATTACAAA+CGG | - | Chr1:76445631-76445650 | None:intergenic | 15.0% |
| !! | AATGAAATATTGAATATTGC+AGG | + | Chr1:76445419-76445438 | MsG0180004326.01.T01:intron | 20.0% |
| !! | ATGAAACTCTACATATTTAT+AGG | - | Chr1:76445238-76445257 | None:intergenic | 20.0% |
| !! | CTGAATTATATATTATATGC+AGG | + | Chr1:76445686-76445705 | MsG0180004326.01.T01:intron | 20.0% |
| !! | CTGCATATAATATATAATTC+AGG | - | Chr1:76445688-76445707 | None:intergenic | 20.0% |
| !! | GAATTATATATTATATGCAG+GGG | + | Chr1:76445688-76445707 | MsG0180004326.01.T01:intron | 20.0% |
| !! | TAAACTCATACTATAAAACA+TGG | - | Chr1:76444530-76444549 | None:intergenic | 20.0% |
| !! | TATATATAAGCATCACATAT+TGG | + | Chr1:76446353-76446372 | MsG0180004326.01.T01:three_prime_UTR | 20.0% |
| ! | ACATCATCTTAAAGCAATTA+AGG | - | Chr1:76443966-76443985 | None:intergenic | 25.0% |
| ! | ATGTTTAACAAAAGTCTACT+TGG | + | Chr1:76445315-76445334 | MsG0180004326.01.T01:intron | 25.0% |
| ! | CATCATCTTAAAGCAATTAA+GGG | - | Chr1:76443965-76443984 | None:intergenic | 25.0% |
| ! | CCTAATCCAAAATTATAAGA+TGG | - | Chr1:76444602-76444621 | None:intergenic | 25.0% |
| ! | CTAATCTTCACTTTACAAAA+CGG | - | Chr1:76444645-76444664 | None:intergenic | 25.0% |
| ! | TATAGTTAGTATGTTGTTAC+CGG | - | Chr1:76445604-76445623 | None:intergenic | 25.0% |
| ! | TTCTATGAAGTCATTGAAAA+TGG | + | Chr1:76443993-76444012 | MsG0180004326.01.T01:CDS | 25.0% |
| !! | CCATCTTATAATTTTGGATT+AGG | + | Chr1:76444599-76444618 | MsG0180004326.01.T01:intron | 25.0% |
| !! | CTCATACCATCTTATAATTT+TGG | + | Chr1:76444593-76444612 | MsG0180004326.01.T01:intron | 25.0% |
| !! | TTGCTCTAAATTGTTTATGT+CGG | + | Chr1:76446213-76446232 | MsG0180004326.01.T01:three_prime_UTR | 25.0% |
| !!! | AAAGTTGATGTATTATATCG+AGG | + | Chr1:76445661-76445680 | MsG0180004326.01.T01:intron | 25.0% |
| !!! | GACATTTTTTATGCTAATAG+AGG | + | Chr1:76444032-76444051 | MsG0180004326.01.T01:CDS | 25.0% |
| !!! | GCAATTAAGGGTATTTATAA+AGG | - | Chr1:76443953-76443972 | None:intergenic | 25.0% |
| AAATATTGAATATTGCAGGC+TGG | + | Chr1:76445423-76445442 | MsG0180004326.01.T01:intron | 30.0% | |
| AATGATAAACAGTGCATTCA+GGG | - | Chr1:76444505-76444524 | None:intergenic | 30.0% | |
| ATCCAAATCCAAATCCAAAT+TGG | - | Chr1:76444068-76444087 | None:intergenic | 30.0% | |
| ATTACATGCCAATTTGGATT+TGG | + | Chr1:76444057-76444076 | MsG0180004326.01.T01:CDS | 30.0% | |
| CAATTACTTCATATCCTCTT+AGG | - | Chr1:76445074-76445093 | None:intergenic | 30.0% | |
| CATCAATCAACTACAACTAT+AGG | + | Chr1:76444874-76444893 | MsG0180004326.01.T01:intron | 30.0% | |
| CATGTCGTTATAGTTAAACA+AGG | - | Chr1:76445298-76445317 | None:intergenic | 30.0% | |
| GATATTAAACAAGGTTCCAA+TGG | + | Chr1:76446031-76446050 | MsG0180004326.01.T01:CDS | 30.0% | |
| TAACATACCTAAAGGTAGAA+AGG | + | Chr1:76445458-76445477 | MsG0180004326.01.T01:CDS | 30.0% | |
| TAAGGATAATACAGCAGAAA+AGG | + | Chr1:76445029-76445048 | MsG0180004326.01.T01:CDS | 30.0% | |
| TGGAAGAAGATCAAAAATAG+AGG | + | Chr1:76445482-76445501 | MsG0180004326.01.T01:CDS | 30.0% | |
| TTGAAAATCTAGGAAGAACA+TGG | - | Chr1:76445984-76446003 | None:intergenic | 30.0% | |
| TTTGGATTTGGATTTGGATT+TGG | + | Chr1:76444069-76444088 | MsG0180004326.01.T01:CDS | 30.0% | |
| ! | CGTTTTGTAAAGTGAAGATT+AGG | + | Chr1:76444643-76444662 | MsG0180004326.01.T01:intron | 30.0% |
| ! | GGTTTGCTTGATATTAAACA+AGG | + | Chr1:76446022-76446041 | MsG0180004326.01.T01:CDS | 30.0% |
| ! | TAACAACTGGTTCAACAAAA+GGG | - | Chr1:76444131-76444150 | None:intergenic | 30.0% |
| ! | TGCTCTAAATTGTTTATGTC+GGG | + | Chr1:76446214-76446233 | MsG0180004326.01.T01:three_prime_UTR | 30.0% |
| ! | TTAACAACTGGTTCAACAAA+AGG | - | Chr1:76444132-76444151 | None:intergenic | 30.0% |
| ! | TTTATTTCAACGCTTTGTTG+AGG | + | Chr1:76445873-76445892 | MsG0180004326.01.T01:CDS | 30.0% |
| ! | TTTTGTTGAACCAGTTGTTA+AGG | + | Chr1:76444131-76444150 | MsG0180004326.01.T01:CDS | 30.0% |
| !!! | TTGTTTATTTTTGTCCCCTA+GGG | + | Chr1:76444976-76444995 | MsG0180004326.01.T01:intron | 30.0% |
| !!! | TTTGTTTATTTTTGTCCCCT+AGG | + | Chr1:76444975-76444994 | MsG0180004326.01.T01:intron | 30.0% |
| AACAACCATTTGATGCAACT+AGG | + | Chr1:76445834-76445853 | MsG0180004326.01.T01:CDS | 35.0% | |
| AATTCTGCTTGATTCCACTA+AGG | + | Chr1:76445011-76445030 | MsG0180004326.01.T01:CDS | 35.0% | |
| ATACCTAAAGGTAGAAAGGA+TGG | + | Chr1:76445462-76445481 | MsG0180004326.01.T01:CDS | 35.0% | |
| CCAGTGTATAACATACCTAA+AGG | + | Chr1:76445450-76445469 | MsG0180004326.01.T01:CDS | 35.0% | |
| CCTTTAGGTATGTTATACAC+TGG | - | Chr1:76445453-76445472 | None:intergenic | 35.0% | |
| CTAAATTGTTTATGTCGGGT+GGG | + | Chr1:76446218-76446237 | MsG0180004326.01.T01:three_prime_UTR | 35.0% | |
| CTATCAAGAACATGTACTTC+TGG | + | Chr1:76445800-76445819 | MsG0180004326.01.T01:CDS | 35.0% | |
| GAAGTCATTGAAAATGGCAA+TGG | + | Chr1:76443999-76444018 | MsG0180004326.01.T01:CDS | 35.0% | |
| GAATGATAAACAGTGCATTC+AGG | - | Chr1:76444506-76444525 | None:intergenic | 35.0% | |
| GATGCATTAAAAGAAGGTGA+TGG | - | Chr1:76445522-76445541 | None:intergenic | 35.0% | |
| TAAATTGTTTATGTCGGGTG+GGG | + | Chr1:76446219-76446238 | MsG0180004326.01.T01:three_prime_UTR | 35.0% | |
| TATTGCACGACACACATATA+CGG | - | Chr1:76444848-76444867 | None:intergenic | 35.0% | |
| TCACAATGTTCCTTGTTCTT+GGG | - | Chr1:76445940-76445959 | None:intergenic | 35.0% | |
| TCTAAATTGTTTATGTCGGG+TGG | + | Chr1:76446217-76446236 | MsG0180004326.01.T01:three_prime_UTR | 35.0% | |
| TCTTACGTAGAAAACTGCTT+CGG | - | Chr1:76445172-76445191 | None:intergenic | 35.0% | |
| TGCCAATTTGGATTTGGATT+TGG | + | Chr1:76444063-76444082 | MsG0180004326.01.T01:CDS | 35.0% | |
| TTCACAATGTTCCTTGTTCT+TGG | - | Chr1:76445941-76445960 | None:intergenic | 35.0% | |
| TTCACTATGTCCTTAACAAC+TGG | - | Chr1:76444144-76444163 | None:intergenic | 35.0% | |
| TTCCTTAATCATTGCTCTGA+GGG | - | Chr1:76444386-76444405 | None:intergenic | 35.0% | |
| TTCTGCTGTATTATCCTTAG+TGG | - | Chr1:76445028-76445047 | None:intergenic | 35.0% | |
| TTTCCTTAATCATTGCTCTG+AGG | - | Chr1:76444387-76444406 | None:intergenic | 35.0% | |
| ! | AACGCTTTGTTGAGGAAAAA+TGG | + | Chr1:76445881-76445900 | MsG0180004326.01.T01:CDS | 35.0% |
| ! | ATGTGCTGATATTCTTGCTA+TGG | + | Chr1:76445140-76445159 | MsG0180004326.01.T01:CDS | 35.0% |
| AATCTAGGAAGAACATGGCT+TGG | - | Chr1:76445979-76445998 | None:intergenic | 40.0% | |
| AGCTCGGATGCATTAAAAGA+AGG | - | Chr1:76445528-76445547 | None:intergenic | 40.0% | |
| ATGTTGCATGCATACATGCA+TGG | + | Chr1:76444318-76444337 | MsG0180004326.01.T01:intron | 40.0% | |
| ATTTGCTCGTACTTCACCAT+TGG | - | Chr1:76446050-76446069 | None:intergenic | 40.0% | |
| CAAGAACAGATTAAGCCAAG+TGG | + | Chr1:76445745-76445764 | MsG0180004326.01.T01:CDS | 40.0% | |
| CTTCCATCCTTTCTACCTTT+AGG | - | Chr1:76445468-76445487 | None:intergenic | 40.0% | |
| CTTTGGATTCAGAATTTGCC+AGG | + | Chr1:76445774-76445793 | MsG0180004326.01.T01:CDS | 40.0% | |
| GAGGTGATTACATGCCAATT+TGG | + | Chr1:76444051-76444070 | MsG0180004326.01.T01:CDS | 40.0% | |
| GCAAATTCTGAATCCAAAGC+TGG | - | Chr1:76445773-76445792 | None:intergenic | 40.0% | |
| GGACATAGTGAATAGAGCTT+TGG | + | Chr1:76444152-76444171 | MsG0180004326.01.T01:CDS | 40.0% | |
| GGATTTGGATTTGGATTTGG+AGG | + | Chr1:76444072-76444091 | MsG0180004326.01.T01:CDS | 40.0% | |
| TATTGAATATTGCAGGCTGG+AGG | + | Chr1:76445426-76445445 | MsG0180004326.01.T01:intron | 40.0% | |
| TCGTTCCTAGTTGCATCAAA+TGG | - | Chr1:76445842-76445861 | None:intergenic | 40.0% | |
| TCTTATAAGAGCAGCTGCAA+GGG | - | Chr1:76444190-76444209 | None:intergenic | 40.0% | |
| TTCTTATAAGAGCAGCTGCA+AGG | - | Chr1:76444191-76444210 | None:intergenic | 40.0% | |
| TTGGATTTGGATTTGGAGGA+GGG | + | Chr1:76444076-76444095 | MsG0180004326.01.T01:CDS | 40.0% | |
| TTTGGATTTGGATTTGGAGG+AGG | + | Chr1:76444075-76444094 | MsG0180004326.01.T01:CDS | 40.0% | |
| ! | CCTAGATTTTCAACAAGCCA+TGG | + | Chr1:76445991-76446010 | MsG0180004326.01.T01:CDS | 40.0% |
| ! | TGGTTTTTCTGCACAAGAGA+TGG | + | Chr1:76445569-76445588 | MsG0180004326.01.T01:CDS | 40.0% |
| !! | ACATGTTCTTGATAGTGTCC+TGG | - | Chr1:76445795-76445814 | None:intergenic | 40.0% |
| !! | CCATGGCTTGTTGAAAATCT+AGG | - | Chr1:76445994-76446013 | None:intergenic | 40.0% |
| AAACAGTGCATTCAGGGCAT+TGG | - | Chr1:76444499-76444518 | None:intergenic | 45.0% | |
| AAGCAAACCCATCTTCACCA+TGG | - | Chr1:76446011-76446030 | None:intergenic | 45.0% | |
| AATCCAAAGCTGGATCCACT+TGG | - | Chr1:76445763-76445782 | None:intergenic | 45.0% | |
| AATTGACCCATCACATCCCT+AGG | - | Chr1:76444995-76445014 | None:intergenic | 45.0% | |
| ATCACGCAGTTTGGTCAACA+TGG | + | Chr1:76445549-76445568 | MsG0180004326.01.T01:CDS | 45.0% | |
| ATGTAGAGAGAGAGAGAGAG+AGG | - | Chr1:76444258-76444277 | None:intergenic | 45.0% | |
| ATTGACCCATCACATCCCTA+GGG | - | Chr1:76444994-76445013 | None:intergenic | 45.0% | |
| CAACAAGCCATGGTGAAGAT+GGG | + | Chr1:76446001-76446020 | MsG0180004326.01.T01:CDS | 45.0% | |
| CCAGCAAATTTGAGCCTAAG+AGG | + | Chr1:76445057-76445076 | MsG0180004326.01.T01:CDS | 45.0% | |
| CCTCTTAGGCTCAAATTTGC+TGG | - | Chr1:76445060-76445079 | None:intergenic | 45.0% | |
| CTTCCATGACTGCTTCATAC+AGG | + | Chr1:76444215-76444234 | MsG0180004326.01.T01:CDS | 45.0% | |
| GAACCTGTATGAAGCAGTCA+TGG | - | Chr1:76444221-76444240 | None:intergenic | 45.0% | |
| GCATGAGACACTCAAACACA+TGG | + | Chr1:76444282-76444301 | MsG0180004326.01.T01:intron | 45.0% | |
| TACGTAGAAAACTGCTTCGG+TGG | - | Chr1:76445169-76445188 | None:intergenic | 45.0% | |
| TCAACAAGCCATGGTGAAGA+TGG | + | Chr1:76446000-76446019 | MsG0180004326.01.T01:CDS | 45.0% | |
| TCTACTCTAGCCCAAGAACA+AGG | + | Chr1:76445927-76445946 | MsG0180004326.01.T01:CDS | 45.0% | |
| TGAGACACTCAAACACATGG+TGG | + | Chr1:76444285-76444304 | MsG0180004326.01.T01:intron | 45.0% | |
| TGCCCTCAGAGCAATGATTA+AGG | + | Chr1:76444381-76444400 | MsG0180004326.01.T01:intron | 45.0% | |
| TGTAGAGAGAGAGAGAGAGA+GGG | - | Chr1:76444257-76444276 | None:intergenic | 45.0% | |
| AAGCCAAGTGGATCCAGCTT+TGG | + | Chr1:76445757-76445776 | MsG0180004326.01.T01:CDS | 50.0% | |
| ACCAAACTGCGTGATGAGCT+CGG | - | Chr1:76445544-76445563 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGGGACAGAA+GGG | - | Chr1:76444248-76444267 | None:intergenic | 50.0% | |
| AGCAACCACTGACGTCGTAT+TGG | - | Chr1:76444797-76444816 | None:intergenic | 50.0% | |
| ATAAGAGCAGCTGCAAGGGT+GGG | - | Chr1:76444186-76444205 | None:intergenic | 50.0% | |
| CAAGAGATGGTCGCTCTATC+CGG | + | Chr1:76445582-76445601 | MsG0180004326.01.T01:CDS | 50.0% | |
| CACATACACTAGGAGTGGCA+AGG | + | Chr1:76445711-76445730 | MsG0180004326.01.T01:CDS | 50.0% | |
| TATAAGAGCAGCTGCAAGGG+TGG | - | Chr1:76444187-76444206 | None:intergenic | 50.0% | |
| TGCACGACACACATATACGG+TGG | - | Chr1:76444845-76444864 | None:intergenic | 50.0% | |
| TTGACCCATCACATCCCTAG+GGG | - | Chr1:76444993-76445012 | None:intergenic | 50.0% | |
| TTGTCCCCTAGGGATGTGAT+GGG | + | Chr1:76444986-76445005 | MsG0180004326.01.T01:intron | 50.0% | |
| TTTGTCCCCTAGGGATGTGA+TGG | + | Chr1:76444985-76445004 | MsG0180004326.01.T01:intron | 50.0% | |
| ! | TATGCAGGGGCACATACACT+AGG | + | Chr1:76445701-76445720 | MsG0180004326.01.T01:intron | 50.0% |
| !! | AATCATTGCTCTGAGGGCAC+TGG | - | Chr1:76444380-76444399 | None:intergenic | 50.0% |
| ATGAAACCACGCCAGGGCAT+CGG | - | Chr1:76445122-76445141 | None:intergenic | 55.0% | |
| CAGCACATGAAACCACGCCA+GGG | - | Chr1:76445128-76445147 | None:intergenic | 55.0% | |
| CCATGCCAATACGACGTCAG+TGG | + | Chr1:76444789-76444808 | MsG0180004326.01.T01:intron | 55.0% | |
| GAGAGAGAGAGAGGGACAGA+AGG | - | Chr1:76444249-76444268 | None:intergenic | 55.0% | |
| GAGAGAGAGAGGGACAGAAG+GGG | - | Chr1:76444247-76444266 | None:intergenic | 55.0% | |
| GAGCTTGAAAACCGATGCCC+TGG | + | Chr1:76445108-76445127 | MsG0180004326.01.T01:CDS | 55.0% | |
| TCAGCACATGAAACCACGCC+AGG | - | Chr1:76445129-76445148 | None:intergenic | 55.0% | |
| TCCGAGCTCATCACGCAGTT+TGG | + | Chr1:76445540-76445559 | MsG0180004326.01.T01:CDS | 55.0% | |
| ! | AGGGGCACATACACTAGGAG+TGG | + | Chr1:76445706-76445725 | MsG0180004326.01.T01:intron | 55.0% |
| ! | CCACTGACGTCGTATTGGCA+TGG | - | Chr1:76444792-76444811 | None:intergenic | 55.0% |
| TGAAAACCGATGCCCTGGCG+TGG | + | Chr1:76445113-76445132 | MsG0180004326.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 76443938 | 76446382 | 76443938 | ID=MsG0180004326.01;Name=MsG0180004326.01 |
| Chr1 | mRNA | 76443938 | 76446382 | 76443938 | ID=MsG0180004326.01.T01;Parent=MsG0180004326.01;Name=MsG0180004326.01.T01;_AED=0.25;_eAED=0.25;_QI=41|1|1|1|0.75|0.6|5|233|329 |
| Chr1 | exon | 76443938 | 76444236 | 76443938 | ID=MsG0180004326.01.T01:exon:12624;Parent=MsG0180004326.01.T01 |
| Chr1 | exon | 76444997 | 76445185 | 76444997 | ID=MsG0180004326.01.T01:exon:12625;Parent=MsG0180004326.01.T01 |
| Chr1 | exon | 76445441 | 76445603 | 76445441 | ID=MsG0180004326.01.T01:exon:12626;Parent=MsG0180004326.01.T01 |
| Chr1 | exon | 76445708 | 76446283 | 76445708 | ID=MsG0180004326.01.T01:exon:12627;Parent=MsG0180004326.01.T01 |
| Chr1 | exon | 76446346 | 76446382 | 76446346 | ID=MsG0180004326.01.T01:exon:12628;Parent=MsG0180004326.01.T01 |
| Chr1 | five_prime_UTR | 76443938 | 76443978 | 76443938 | ID=MsG0180004326.01.T01:five_prime_utr;Parent=MsG0180004326.01.T01 |
| Chr1 | CDS | 76443979 | 76444236 | 76443979 | ID=MsG0180004326.01.T01:cds;Parent=MsG0180004326.01.T01 |
| Chr1 | CDS | 76444997 | 76445185 | 76444997 | ID=MsG0180004326.01.T01:cds;Parent=MsG0180004326.01.T01 |
| Chr1 | CDS | 76445441 | 76445603 | 76445441 | ID=MsG0180004326.01.T01:cds;Parent=MsG0180004326.01.T01 |
| Chr1 | CDS | 76445708 | 76446087 | 76445708 | ID=MsG0180004326.01.T01:cds;Parent=MsG0180004326.01.T01 |
| Chr1 | three_prime_UTR | 76446088 | 76446283 | 76446088 | ID=MsG0180004326.01.T01:three_prime_utr;Parent=MsG0180004326.01.T01 |
| Chr1 | three_prime_UTR | 76446346 | 76446382 | 76446346 | ID=MsG0180004326.01.T01:three_prime_utr;Parent=MsG0180004326.01.T01 |
| Gene Sequence |
| Protein sequence |
