AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880044712.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044712.01.T01 MTR_8g467490 96.491 399 9 3 1 398 1 395 0.0 789
MsG0880044712.01.T01 MTR_5g040420 60.417 432 96 12 1 398 1 391 5.22e-162 461
MsG0880044712.01.T01 MTR_6g011860 49.268 410 177 10 1 398 1 391 2.01e-124 365
MsG0880044712.01.T01 MTR_5g090970 50.439 228 104 3 9 233 12 233 3.32e-74 234
MsG0880044712.01.T01 MTR_2g068880 60.753 186 63 6 12 191 19 200 1.94e-73 232
MsG0880044712.01.T01 MTR_5g090970 50.000 228 104 4 9 233 12 232 7.18e-72 228
MsG0880044712.01.T01 MTR_2g068920 63.314 169 55 4 12 174 18 185 9.13e-72 227
MsG0880044712.01.T01 MTR_2g080010 43.111 225 115 3 1 213 1 224 6.67e-61 201
MsG0880044712.01.T01 MTR_4g089135 52.273 176 70 2 17 178 17 192 3.98e-60 198
MsG0880044712.01.T01 MTR_4g134460 51.462 171 71 3 13 183 52 210 1.61e-58 197
MsG0880044712.01.T01 MTR_7g085220 43.496 246 104 7 17 252 10 230 2.91e-58 193
MsG0880044712.01.T01 MTR_2157s0010 48.529 204 92 6 17 216 10 204 1.03e-57 189
MsG0880044712.01.T01 MTR_5g041940 54.321 162 67 3 17 178 5 159 2.87e-57 188
MsG0880044712.01.T01 MTR_8g094580 53.165 158 66 3 17 174 9 158 1.38e-55 185
MsG0880044712.01.T01 MTR_2g093810 53.797 158 68 2 17 174 16 168 2.41e-55 185
MsG0880044712.01.T01 MTR_4g036030 44.498 209 99 5 17 222 9 203 3.88e-55 186
MsG0880044712.01.T01 MTR_3g088110 48.634 183 67 4 17 186 9 177 6.16e-55 183
MsG0880044712.01.T01 MTR_4g081870 55.000 160 65 3 17 176 11 163 7.58e-55 182
MsG0880044712.01.T01 MTR_6g012670 40.293 273 130 7 1 258 5 259 9.20e-55 184
MsG0880044712.01.T01 MTR_2g079990 50.000 182 79 5 17 198 18 187 3.35e-54 183
MsG0880044712.01.T01 MTR_8g076110 43.878 196 92 5 11 202 2 183 5.69e-54 181
MsG0880044712.01.T01 MTR_5g012080 49.133 173 74 3 17 186 9 170 8.24e-54 182
MsG0880044712.01.T01 MTR_4g108760 45.876 194 83 3 17 197 19 203 3.20e-53 181
MsG0880044712.01.T01 MTR_7g100990 50.595 168 73 4 13 177 8 168 4.28e-53 179
MsG0880044712.01.T01 MTR_8g059170 52.096 167 70 5 17 183 16 172 4.78e-53 179
MsG0880044712.01.T01 MTR_3g435150 50.000 176 78 3 1 175 1 167 7.81e-53 178
MsG0880044712.01.T01 MTR_3g096920 51.266 158 68 3 17 174 9 157 3.23e-52 176
MsG0880044712.01.T01 MTR_5g021710 37.079 267 135 10 9 268 2 242 4.02e-52 178
MsG0880044712.01.T01 MTR_4g101680 47.619 168 72 3 17 181 9 163 1.10e-51 177
MsG0880044712.01.T01 MTR_4g075980 49.143 175 72 4 12 185 12 170 2.35e-51 174
MsG0880044712.01.T01 MTR_2g064090 50.311 161 68 4 17 175 8 158 6.86e-51 174
MsG0880044712.01.T01 MTR_6g032770 45.455 176 88 2 12 186 14 182 1.37e-50 174
MsG0880044712.01.T01 MTR_2g079990 45.588 204 83 6 17 198 18 215 1.65e-50 174
MsG0880044712.01.T01 MTR_2g078700 50.000 162 70 2 17 176 25 177 5.18e-50 173
MsG0880044712.01.T01 MTR_3g109340 48.588 177 77 3 1 177 12 174 2.01e-49 171
MsG0880044712.01.T01 MTR_3g109340 48.588 177 76 3 1 177 12 173 2.06e-49 171
MsG0880044712.01.T01 MTR_3g096920 55.474 137 57 2 17 153 9 141 3.11e-49 169
MsG0880044712.01.T01 MTR_6g477900 42.328 189 95 4 17 203 8 184 4.74e-49 166
MsG0880044712.01.T01 MTR_6g084430 37.956 274 136 8 11 269 1 255 5.24e-49 169
MsG0880044712.01.T01 MTR_7g085260 41.589 214 100 4 17 212 19 225 6.60e-49 170
MsG0880044712.01.T01 MTR_4g035590 50.000 164 63 4 17 176 10 158 1.16e-48 169
MsG0880044712.01.T01 MTR_5g076850 47.205 161 72 3 17 175 8 157 6.99e-48 172
MsG0880044712.01.T01 MTR_8g024480 46.988 166 77 4 17 176 17 177 8.13e-48 169
MsG0880044712.01.T01 MTR_3g070030 44.253 174 88 3 12 184 15 180 9.55e-48 166
MsG0880044712.01.T01 MTR_5g069030 50.307 163 68 4 18 178 28 179 1.73e-47 171
MsG0880044712.01.T01 MTR_3g064580 45.078 193 82 6 17 206 8 179 1.75e-47 172
MsG0880044712.01.T01 MTR_2g062730 46.012 163 73 3 17 176 12 162 3.97e-47 164
MsG0880044712.01.T01 MTR_7g005280 45.604 182 85 3 1 182 1 168 5.41e-47 161
MsG0880044712.01.T01 MTR_1g096430 46.108 167 74 4 11 174 3 156 1.07e-46 163
MsG0880044712.01.T01 MTR_1g008740 46.552 174 81 4 3 175 2 164 1.32e-46 163
MsG0880044712.01.T01 MTR_5g014300 46.707 167 66 4 17 174 8 160 1.61e-46 162
MsG0880044712.01.T01 MTR_1g008740 46.552 174 81 4 3 175 16 178 2.51e-46 163
MsG0880044712.01.T01 MTR_3g116070 40.000 240 126 5 9 240 17 246 6.93e-46 161
MsG0880044712.01.T01 MTR_3g093050 47.273 165 74 4 18 180 25 178 1.29e-45 166
MsG0880044712.01.T01 MTR_3g093050 47.273 165 74 4 18 180 25 178 2.16e-45 166
MsG0880044712.01.T01 MTR_1g069805 36.752 234 122 4 17 247 12 222 2.17e-45 158
MsG0880044712.01.T01 MTR_3g096140 45.122 164 77 4 13 174 5 157 2.53e-45 158
MsG0880044712.01.T01 MTR_4g098630 46.784 171 79 4 17 184 8 169 2.96e-45 159
MsG0880044712.01.T01 MTR_7g011130 46.061 165 81 3 18 176 22 184 3.81e-45 159
MsG0880044712.01.T01 MTR_2g064470 46.784 171 79 5 11 181 7 165 1.03e-44 157
MsG0880044712.01.T01 MTR_3g096140 45.122 164 77 4 13 174 5 157 1.47e-44 158
MsG0880044712.01.T01 MTR_7g011120 45.283 159 85 1 18 176 11 167 1.64e-44 156
MsG0880044712.01.T01 MTR_8g063550 43.827 162 78 4 15 174 6 156 2.00e-44 157
MsG0880044712.01.T01 MTR_8g063550 43.827 162 78 4 15 174 6 156 3.67e-44 159
MsG0880044712.01.T01 MTR_8g063550 43.827 162 78 4 15 174 6 156 4.19e-44 159
MsG0880044712.01.T01 MTR_3g093040 43.529 170 82 5 14 180 106 264 6.83e-44 155
MsG0880044712.01.T01 MTR_1g097300 47.024 168 72 5 13 175 15 170 9.98e-44 160
MsG0880044712.01.T01 MTR_7g097090 42.949 156 76 1 17 172 12 154 3.11e-42 150
MsG0880044712.01.T01 MTR_1g090723 46.951 164 73 6 17 177 10 162 3.87e-42 156
MsG0880044712.01.T01 MTR_1g090723 44.311 167 72 5 17 177 10 161 4.07e-42 156
MsG0880044712.01.T01 MTR_1g090723 44.311 167 72 5 17 177 10 161 4.26e-42 156
MsG0880044712.01.T01 MTR_8g093580 37.674 215 98 6 15 205 6 208 1.38e-41 153
MsG0880044712.01.T01 MTR_8g099750 44.516 155 80 2 17 171 16 164 1.62e-41 146
MsG0880044712.01.T01 MTR_1g090720 42.857 168 81 4 15 176 42 200 9.98e-41 150
MsG0880044712.01.T01 MTR_0036s0150 39.785 186 95 6 17 199 7 178 1.41e-39 148
MsG0880044712.01.T01 MTR_2g086880 48.819 127 62 2 15 140 18 142 2.16e-38 145
MsG0880044712.01.T01 MTR_2g086880 48.819 127 62 2 15 140 18 142 2.68e-38 145
MsG0880044712.01.T01 MTR_3g098810 42.857 168 89 3 17 182 16 178 1.87e-37 136
MsG0880044712.01.T01 MTR_8g023840 49.254 134 64 3 18 148 14 146 1.08e-36 138
MsG0880044712.01.T01 MTR_4g052620 35.023 217 124 6 11 222 1 205 2.31e-36 134
MsG0880044712.01.T01 MTR_3g098810 49.618 131 62 2 17 145 16 144 6.74e-35 127
MsG0880044712.01.T01 MTR_7g105170 30.400 250 155 9 15 257 4 241 1.29e-34 129
MsG0880044712.01.T01 MTR_3g070040 40.000 165 85 4 19 181 12 164 1.45e-34 130
MsG0880044712.01.T01 MTR_3g096140 41.781 146 72 4 31 174 2 136 5.32e-34 129
MsG0880044712.01.T01 MTR_2g086690 40.606 165 79 6 17 172 6 160 1.67e-33 125
MsG0880044712.01.T01 MTR_8g023860 47.244 127 63 3 18 141 15 140 4.20e-32 125
MsG0880044712.01.T01 MTR_8g094580 50.000 112 48 3 63 174 1 104 6.09e-32 121
MsG0880044712.01.T01 MTR_8g023900 37.870 169 87 4 18 183 196 349 6.93e-30 120
MsG0880044712.01.T01 MTR_8g023900 35.542 166 91 4 18 180 15 167 7.17e-29 117
MsG0880044712.01.T01 MTR_8g023930 36.686 169 89 5 18 183 27 180 1.72e-28 116
MsG0880044712.01.T01 MTR_4g094302 37.342 158 88 2 17 174 13 159 2.31e-28 110
MsG0880044712.01.T01 MTR_4g094302 40.476 126 67 1 17 142 13 130 1.08e-26 104
MsG0880044712.01.T01 MTR_8g023880 33.155 187 86 8 18 186 10 175 1.29e-21 94.0
MsG0880044712.01.T01 MTR_8g093790 32.941 170 79 7 17 184 12 148 1.61e-19 85.9
MsG0880044712.01.T01 MTR_7g070140 44.828 87 45 1 68 154 17 100 1.76e-19 84.3
MsG0880044712.01.T01 MTR_3g096400 32.099 162 95 5 17 173 9 160 3.04e-18 83.2
MsG0880044712.01.T01 MTR_7g083330 29.518 166 100 6 18 181 21 171 4.25e-16 76.6
MsG0880044712.01.T01 MTR_7g083370 33.333 126 76 5 18 140 13 133 2.30e-15 73.2
MsG0880044712.01.T01 MTR_7g083360 31.944 144 90 6 13 152 7 146 5.47e-15 72.4
MsG0880044712.01.T01 MTR_1g087190 58.333 48 19 1 17 63 7 54 2.45e-13 64.7
MsG0880044712.01.T01 MTR_7g070150 39.241 79 36 1 108 186 3 69 1.20e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044712.01.T01 AT1G26870 60.727 275 90 5 1 264 1 268 3.83e-108 324
MsG0880044712.01.T01 AT5G39820 66.667 204 55 4 2 192 7 210 5.73e-97 293
MsG0880044712.01.T01 AT2G43000 60.116 173 57 3 9 181 12 172 3.29e-72 227
MsG0880044712.01.T01 AT3G12910 56.284 183 71 5 1 175 5 186 6.39e-62 202
MsG0880044712.01.T01 AT2G02450 47.087 206 85 5 14 219 50 231 3.29e-59 197
MsG0880044712.01.T01 AT2G02450 47.087 206 85 5 14 219 50 231 4.07e-59 198
MsG0880044712.01.T01 AT3G15510 42.857 224 107 3 19 240 21 225 8.87e-59 196
MsG0880044712.01.T01 AT3G04070 53.529 170 64 3 17 178 12 174 6.88e-58 192
MsG0880044712.01.T01 AT1G69490 45.813 203 103 4 17 219 11 206 8.51e-58 190
MsG0880044712.01.T01 AT1G61110 53.143 175 71 4 17 183 18 189 3.82e-57 190
MsG0880044712.01.T01 AT3G04070 51.397 179 70 3 17 178 12 190 6.47e-57 191
MsG0880044712.01.T01 AT5G63790 44.186 215 101 6 3 215 36 233 5.87e-56 187
MsG0880044712.01.T01 AT5G63790 44.186 215 101 6 3 215 46 243 7.56e-56 187
MsG0880044712.01.T01 AT1G01720 52.410 166 71 3 17 182 9 166 5.84e-55 183
MsG0880044712.01.T01 AT4G27410 50.595 168 72 3 17 184 16 172 8.40e-55 183
MsG0880044712.01.T01 AT2G17040 50.286 175 70 4 12 185 3 161 7.48e-54 180
MsG0880044712.01.T01 AT1G76420 46.524 187 84 2 2 188 15 185 7.78e-54 182
MsG0880044712.01.T01 AT5G61430 35.811 296 145 6 1 286 1 261 1.67e-53 181
MsG0880044712.01.T01 AT5G08790 51.534 163 71 4 13 174 4 159 1.90e-53 179
MsG0880044712.01.T01 AT3G15500 51.786 168 66 4 17 182 16 170 3.14e-53 180
MsG0880044712.01.T01 AT4G36160 47.701 174 75 4 17 187 16 176 5.30e-53 181
MsG0880044712.01.T01 AT5G07680 43.868 212 100 3 17 218 5 207 5.50e-53 179
MsG0880044712.01.T01 AT4G36160 47.701 174 75 4 17 187 12 172 5.76e-53 181
MsG0880044712.01.T01 AT4G36160 47.701 174 75 4 17 187 12 172 5.76e-53 181
MsG0880044712.01.T01 AT5G07680 43.868 212 100 3 17 218 19 221 8.51e-53 179
MsG0880044712.01.T01 AT5G39610 44.554 202 89 4 17 206 22 212 1.24e-52 177
MsG0880044712.01.T01 AT1G52880 54.438 169 66 3 19 181 21 184 1.41e-52 178
MsG0880044712.01.T01 AT1G12260 48.810 168 70 4 17 181 9 163 1.44e-52 179
MsG0880044712.01.T01 AT1G12260 48.810 168 70 4 17 181 9 163 1.74e-52 180
MsG0880044712.01.T01 AT1G77450 40.244 246 129 7 17 253 12 248 1.89e-52 176
MsG0880044712.01.T01 AT2G18060 47.701 174 74 5 17 187 11 170 2.84e-52 179
MsG0880044712.01.T01 AT2G18060 47.701 174 74 5 17 187 11 170 2.84e-52 179
MsG0880044712.01.T01 AT1G52890 51.479 169 66 5 17 183 16 170 3.27e-52 177
MsG0880044712.01.T01 AT2G24430 47.093 172 81 1 9 180 10 171 1.17e-51 176
MsG0880044712.01.T01 AT2G24430 47.093 172 81 1 9 180 10 171 1.17e-51 176
MsG0880044712.01.T01 AT4G10350 36.934 287 137 9 17 293 11 263 4.20e-51 175
MsG0880044712.01.T01 AT3G17730 48.193 166 73 3 17 180 8 162 5.40e-51 172
MsG0880044712.01.T01 AT5G66300 44.240 217 98 7 17 225 14 215 1.72e-50 172
MsG0880044712.01.T01 AT4G27410 45.946 185 72 4 17 184 16 189 1.73e-50 172
MsG0880044712.01.T01 AT1G62700 47.059 170 74 3 17 183 9 165 2.26e-50 174
MsG0880044712.01.T01 AT1G62700 47.059 170 74 3 17 183 9 165 2.26e-50 174
MsG0880044712.01.T01 AT3G18400 48.235 170 76 3 11 180 1 158 3.75e-50 171
MsG0880044712.01.T01 AT5G18270 48.750 160 74 2 17 176 23 174 3.84e-50 172
MsG0880044712.01.T01 AT3G29035 47.150 193 87 6 6 195 14 194 3.90e-50 172
MsG0880044712.01.T01 AT1G71930 38.132 257 136 8 11 263 5 242 5.52e-50 171
MsG0880044712.01.T01 AT1G71930 38.132 257 136 8 11 263 5 242 5.52e-50 171
MsG0880044712.01.T01 AT5G62380 47.826 161 68 4 17 174 9 156 5.79e-50 172
MsG0880044712.01.T01 AT5G62380 47.826 161 68 4 17 174 9 156 5.79e-50 172
MsG0880044712.01.T01 AT3G04060 48.256 172 77 3 17 184 22 185 6.26e-50 172
MsG0880044712.01.T01 AT1G33280 50.307 163 64 3 17 176 10 158 7.58e-50 171
MsG0880044712.01.T01 AT5G18270 48.125 160 75 2 17 176 23 174 2.60e-49 170
MsG0880044712.01.T01 AT3G03200 45.604 182 86 5 17 195 8 179 3.99e-49 173
MsG0880044712.01.T01 AT4G17980 47.500 160 75 2 17 174 8 160 5.50e-49 167
MsG0880044712.01.T01 AT1G65910 49.080 163 70 3 15 175 6 157 5.78e-49 176
MsG0880044712.01.T01 AT4G17980 47.500 160 75 2 17 174 8 160 6.37e-49 167
MsG0880044712.01.T01 AT3G15170 47.337 169 82 2 12 180 17 178 1.32e-48 167
MsG0880044712.01.T01 AT5G53950 45.930 172 86 2 13 184 15 179 1.49e-48 169
MsG0880044712.01.T01 AT5G17260 46.199 171 80 4 17 185 8 168 1.50e-48 171
MsG0880044712.01.T01 AT3G61910 46.707 167 80 4 17 176 13 177 5.80e-48 166
MsG0880044712.01.T01 AT2G46770 46.108 167 81 3 17 176 18 182 1.97e-47 166
MsG0880044712.01.T01 AT3G10500 46.667 165 75 4 15 177 9 162 7.59e-46 166
MsG0880044712.01.T01 AT5G13180 49.068 161 69 2 17 177 16 163 1.42e-45 157
MsG0880044712.01.T01 AT1G32770 45.122 164 84 3 17 176 18 179 1.75e-45 160
MsG0880044712.01.T01 AT1G54330 46.707 167 73 3 17 181 8 160 2.00e-45 159
MsG0880044712.01.T01 AT1G79580 46.626 163 71 4 17 176 19 168 2.97e-45 160
MsG0880044712.01.T01 AT1G79580 46.626 163 71 4 17 176 19 168 2.97e-45 160
MsG0880044712.01.T01 AT1G79580 46.626 163 71 4 17 176 19 168 2.97e-45 160
MsG0880044712.01.T01 AT1G79580 46.626 163 71 4 17 176 19 168 2.97e-45 160
MsG0880044712.01.T01 AT1G79580 46.626 163 71 4 17 176 19 168 2.97e-45 160
MsG0880044712.01.T01 AT1G32510 35.448 268 144 8 17 266 8 264 3.90e-45 157
MsG0880044712.01.T01 AT3G12977 43.258 178 91 3 2 179 5 172 4.29e-45 157
MsG0880044712.01.T01 AT5G46590 54.688 128 55 2 17 142 8 134 5.41e-45 157
MsG0880044712.01.T01 AT5G46590 54.688 128 55 2 17 142 8 134 7.60e-45 157
MsG0880044712.01.T01 AT1G56010 46.369 179 77 5 2 174 6 171 7.82e-45 158
MsG0880044712.01.T01 AT4G35580 49.686 159 67 4 18 174 12 159 8.14e-45 162
MsG0880044712.01.T01 AT1G33060 46.341 164 75 3 13 174 22 174 9.18e-45 164
MsG0880044712.01.T01 AT4G35580 49.686 159 67 4 18 174 12 159 9.24e-45 162
MsG0880044712.01.T01 AT1G33060 46.341 164 75 3 13 174 22 174 9.36e-45 164
MsG0880044712.01.T01 AT4G35580 49.686 159 67 4 18 174 12 159 9.53e-45 162
MsG0880044712.01.T01 AT1G34180 45.087 173 82 3 7 177 8 169 1.78e-44 160
MsG0880044712.01.T01 AT3G10490 44.512 164 79 4 15 176 27 180 2.47e-44 154
MsG0880044712.01.T01 AT5G24590 46.784 171 78 4 9 176 6 166 4.29e-44 159
MsG0880044712.01.T01 AT1G34190 44.828 174 81 4 7 177 8 169 6.18e-44 160
MsG0880044712.01.T01 AT1G34180 45.087 173 82 3 7 177 8 169 9.09e-44 160
MsG0880044712.01.T01 AT5G04410 45.055 182 83 7 15 193 9 176 2.54e-43 159
MsG0880044712.01.T01 AT3G10480 44.578 166 76 4 15 176 27 180 3.81e-43 156
MsG0880044712.01.T01 AT3G10490 44.512 164 79 4 15 176 27 180 5.29e-43 156
MsG0880044712.01.T01 AT3G10480 44.048 168 73 4 15 176 27 179 5.31e-43 156
MsG0880044712.01.T01 AT1G34180 41.622 185 83 3 7 177 8 181 4.51e-42 154
MsG0880044712.01.T01 AT3G49530 37.089 213 111 5 18 217 16 218 5.83e-42 152
MsG0880044712.01.T01 AT1G34180 41.622 185 83 3 7 177 8 181 1.91e-41 154
MsG0880044712.01.T01 AT3G49530 37.089 213 111 5 18 217 16 218 2.10e-41 152
MsG0880044712.01.T01 AT5G09330 41.975 162 81 4 15 174 6 156 8.15e-41 151
MsG0880044712.01.T01 AT5G09330 41.975 162 81 4 15 174 6 156 8.15e-41 151
MsG0880044712.01.T01 AT5G09330 41.975 162 81 4 15 174 6 156 8.15e-41 151
MsG0880044712.01.T01 AT5G09330 41.975 162 81 4 15 174 6 156 8.15e-41 151
MsG0880044712.01.T01 AT5G09330 41.975 162 81 4 15 174 6 156 8.15e-41 151
MsG0880044712.01.T01 AT5G64060 31.786 280 158 10 15 285 6 261 3.10e-40 146
MsG0880044712.01.T01 AT4G28530 41.379 174 73 3 17 174 12 172 6.79e-40 145
MsG0880044712.01.T01 AT2G33480 41.899 179 90 4 1 179 1 165 8.59e-40 143
MsG0880044712.01.T01 AT5G22290 39.535 172 83 4 15 182 21 175 4.91e-39 143
MsG0880044712.01.T01 AT2G33480 41.341 179 89 4 1 179 1 163 1.75e-38 139
MsG0880044712.01.T01 AT3G44290 46.825 126 64 2 16 140 15 138 1.34e-37 136
MsG0880044712.01.T01 AT3G10480 37.563 197 78 4 15 176 27 213 1.37e-37 142
MsG0880044712.01.T01 AT2G27300 44.531 128 68 2 14 140 13 138 1.79e-37 139
MsG0880044712.01.T01 AT3G44290 46.825 126 64 2 16 140 15 138 4.09e-37 137
MsG0880044712.01.T01 AT5G61430 33.476 233 111 5 63 286 1 198 1.13e-34 129
MsG0880044712.01.T01 AT5G04395 39.623 159 80 3 12 156 25 181 1.68e-34 126
MsG0880044712.01.T01 AT1G32870 50.769 130 58 3 15 142 10 135 4.08e-33 130
MsG0880044712.01.T01 AT1G32870 50.769 130 58 3 15 142 10 135 4.21e-33 130
MsG0880044712.01.T01 AT2G43000 58.095 105 32 3 77 181 2 94 4.41e-33 123
MsG0880044712.01.T01 AT1G32870 50.769 130 58 3 15 142 46 171 8.75e-33 129
MsG0880044712.01.T01 AT4G10350 33.473 239 118 8 62 293 12 216 1.84e-30 119
MsG0880044712.01.T01 AT5G22380 34.536 194 106 8 18 204 8 187 8.71e-30 115
MsG0880044712.01.T01 AT5G64530 39.264 163 82 3 17 174 5 155 1.05e-29 114
MsG0880044712.01.T01 AT3G44350 35.429 175 95 5 11 178 1 164 1.45e-29 115
MsG0880044712.01.T01 AT3G12977 45.833 120 55 3 60 179 10 119 4.63e-29 113
MsG0880044712.01.T01 AT1G56010 49.138 116 43 3 63 174 1 104 7.32e-29 113
MsG0880044712.01.T01 AT5G64530 43.307 127 60 2 17 143 5 119 1.86e-28 109
MsG0880044712.01.T01 AT3G44350 38.000 150 83 4 11 153 1 147 4.58e-28 108
MsG0880044712.01.T01 AT4G01550 43.284 134 72 3 16 145 5 138 5.17e-28 115
MsG0880044712.01.T01 AT4G01540 41.481 135 74 4 16 145 5 139 1.54e-24 104
MsG0880044712.01.T01 AT4G01540 40.411 146 79 5 16 156 5 147 2.59e-24 103
MsG0880044712.01.T01 AT4G01520 34.737 190 102 7 18 202 7 179 2.69e-24 102
MsG0880044712.01.T01 AT4G01540 41.481 135 74 4 16 145 5 139 3.19e-24 104
MsG0880044712.01.T01 AT4G01540 41.481 135 74 4 16 145 5 139 3.56e-24 103
MsG0880044712.01.T01 AT1G02250 34.673 199 113 8 18 211 6 192 2.66e-23 100
MsG0880044712.01.T01 AT1G02230 38.806 134 74 5 18 146 6 136 7.86e-22 96.3
MsG0880044712.01.T01 AT4G28530 40.476 126 59 2 17 126 12 137 8.01e-22 95.5
MsG0880044712.01.T01 AT2G33480 40.179 112 56 3 68 179 8 108 6.12e-21 90.9
MsG0880044712.01.T01 AT2G18060 47.368 95 36 4 93 187 2 82 9.41e-21 91.7
MsG0880044712.01.T01 AT3G04420 37.795 127 73 3 18 140 6 130 3.00e-20 90.5
MsG0880044712.01.T01 AT3G04420 37.795 127 73 3 18 140 6 130 1.13e-19 89.7
MsG0880044712.01.T01 AT1G01010 28.800 250 151 8 18 256 6 239 2.85e-18 86.7
MsG0880044712.01.T01 AT1G02220 37.008 127 71 4 18 140 6 127 1.84e-16 80.9
MsG0880044712.01.T01 AT3G04430 36.842 133 70 5 21 141 6 136 2.91e-15 74.3
MsG0880044712.01.T01 AT5G50820 35.878 131 72 5 17 144 19 140 3.89e-15 73.9
MsG0880044712.01.T01 AT5G14000 31.579 133 85 3 18 148 18 146 1.21e-14 71.6
MsG0880044712.01.T01 AT5G14000 27.108 166 103 4 18 181 18 167 1.51e-14 72.4
MsG0880044712.01.T01 AT3G56530 30.189 159 95 5 17 172 54 199 2.47e-14 73.9
MsG0880044712.01.T01 AT3G10490 38.202 89 45 3 88 176 2 80 7.58e-14 72.8
MsG0880044712.01.T01 AT3G10490 38.202 89 45 3 88 176 2 80 7.58e-14 72.8
MsG0880044712.01.T01 AT5G22290 36.957 92 38 3 94 182 2 76 4.78e-12 65.9

Find 95 sgRNAs with CRISPR-Local

Find 165 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAATCAATGGATCAATAAT+TGG 0.177383 8:+48119193 None:intergenic
TGAAATTGGTAACCGGTATA+AGG 0.232151 8:+48119165 None:intergenic
TTAGGAATGTTAGCCATTAA+TGG 0.250578 8:+48118974 None:intergenic
GTCTTGTCTACATATTTCTT+TGG 0.251750 8:+48120490 None:intergenic
CCAGCTCTTGTTACCCTATT+AGG 0.256540 8:+48120685 None:intergenic
CTTGAAGAGGTTATGCTTCC+AGG 0.267006 8:-48121555 MsG0880044712.01.T01:CDS
AGATCTTGATCATTTGAAAT+TGG 0.267969 8:+48119151 None:intergenic
TCATGTTTGAGGAACAAAAT+TGG 0.269676 8:+48119347 None:intergenic
TTACAAGACCATTACAATAA+TGG 0.289925 8:-48119001 MsG0880044712.01.T01:CDS
CAATAATGGGTATCCATTAA+TGG 0.291946 8:-48118987 MsG0880044712.01.T01:CDS
ATTATAAGATGGAACATCTA+AGG 0.299587 8:+48119219 None:intergenic
TACAAGACCATTACAATAAT+GGG 0.299937 8:-48119000 MsG0880044712.01.T01:CDS
TTCCTGTACTTTCTGTCTCT+TGG 0.313082 8:+48120718 None:intergenic
GGAACAGTGCAAGACCTAAT+AGG 0.314506 8:-48120699 MsG0880044712.01.T01:CDS
GGGTAACAAGAGCTGGGTTT+TGG 0.314918 8:-48120678 MsG0880044712.01.T01:CDS
TATTCAACTTGTAGGAATCT+TGG 0.319905 8:-48119492 MsG0880044712.01.T01:intron
AGGTTATGCTTCCAGGGTTT+AGG 0.326370 8:-48121548 MsG0880044712.01.T01:CDS
GGAAGTCATCAAGTCTTGTT+TGG 0.332787 8:-48118856 MsG0880044712.01.T01:CDS
TTCAGTGTGCCTCTCAATAT+TGG 0.343215 8:-48118887 MsG0880044712.01.T01:CDS
ACACGAGGCACGTTCGCATT+AGG 0.344052 8:+48118956 None:intergenic
CTTTGTTATCATCATGTTTG+AGG 0.377564 8:+48119336 None:intergenic
CCAACTGATGAAGAACTTGT+TGG 0.382953 8:-48121519 MsG0880044712.01.T01:CDS
GAACCCTCTGAGGAATAAAT+AGG 0.385421 8:+48120634 None:intergenic
GAAATTGGTAACCGGTATAA+GGG 0.389296 8:+48119166 None:intergenic
TGTATAGAGTTGGCAAGTAC+AGG 0.404014 8:-48120766 MsG0880044712.01.T01:intron
TCAGAGGGTTCTAAGTGTAT+TGG 0.407108 8:-48120622 MsG0880044712.01.T01:CDS
AAGAGGTTAAGTGTTGTGTT+AGG 0.408400 8:+48119263 None:intergenic
ATTCAACTTGTAGGAATCTT+GGG 0.422352 8:-48119491 MsG0880044712.01.T01:intron
ATGGATACCCATTATTGTAA+TGG 0.426120 8:+48118993 None:intergenic
TACTACCAAGTGTTATACTT+AGG 0.432517 8:-48118792 None:intergenic
GATCATTTGAAATTGGTAAC+CGG 0.434751 8:+48119158 None:intergenic
ACTACCAAGTGTTATACTTA+GGG 0.437461 8:-48118791 None:intergenic
TCTACCTTTGTAGAAAACTA+AGG 0.437881 8:+48120588 None:intergenic
GAACAGTGCAAGACCTAATA+GGG 0.447391 8:-48120698 MsG0880044712.01.T01:CDS
ATAATTGGATTATTATAAGA+TGG 0.450751 8:+48119208 None:intergenic
ATGGATACGGTTCGACCCAT+TGG 0.453647 8:-48118917 MsG0880044712.01.T01:CDS
ATCTTGTAACAAAACTTCAA+TGG 0.456838 8:-48119086 MsG0880044712.01.T01:CDS
GAAGTCATCAAGTCTTGTTT+GGG 0.460153 8:-48118855 MsG0880044712.01.T01:CDS
GAGGTTGATGTTTCAAGTAA+AGG 0.463138 8:+48119400 None:intergenic
CCTAATAGGGTAACAAGAGC+TGG 0.463143 8:-48120685 MsG0880044712.01.T01:CDS
TATAAGGGTTTGTAAATCAA+TGG 0.465297 8:+48119181 None:intergenic
ATATGTAGACAAGACCATTC+CGG 0.469723 8:-48120482 MsG0880044712.01.T01:CDS
CCAAAGGAGTCAAAACTGAT+TGG 0.471412 8:-48120561 MsG0880044712.01.T01:CDS
ATATTTATAAATTTGATCCA+TGG 0.478110 8:-48121434 MsG0880044712.01.T01:CDS
AAAGAGCTCTCTCTCACTCA+TGG 0.486372 8:-48119429 MsG0880044712.01.T01:CDS
TATTTATAAATTTGATCCAT+GGG 0.487821 8:-48121433 MsG0880044712.01.T01:CDS
CCAACAAGTTCTTCATCAGT+TGG 0.490455 8:+48121519 None:intergenic
ATCATTTGTTAGAACATTGG+AGG 0.492381 8:+48119381 None:intergenic
TAGGATATGGAAGAGAGAAA+TGG 0.494544 8:-48121591 None:intergenic
ATATTGAGAGGCACACTGAA+TGG 0.495510 8:+48118890 None:intergenic
TGCATCATTTGTTAGAACAT+TGG 0.496772 8:+48119378 None:intergenic
TTTACTTACATTGGCCGGAA+TGG 0.497789 8:+48120468 None:intergenic
TGATTTACAAACCCTTATAC+CGG 0.505584 8:-48119177 MsG0880044712.01.T01:CDS
TATTGAGAGGCACACTGAAT+GGG 0.507464 8:+48118891 None:intergenic
CTAGAGTGACTTGCAAAGCT+AGG 0.507948 8:+48119310 None:intergenic
GTCTTACTTGGTAGATCCCA+TGG 0.514805 8:+48121417 None:intergenic
AGGAATCTTGGGCAATATGC+AGG 0.518840 8:-48119480 MsG0880044712.01.T01:CDS
AGCTCTTTGAGCTGTAGCAT+TGG 0.520084 8:+48119444 None:intergenic
TTGAAGAGGTTATGCTTCCA+GGG 0.523265 8:-48121554 MsG0880044712.01.T01:CDS
AGTGTTGTGTTAGGTTATTG+TGG 0.533214 8:+48119272 None:intergenic
TTGAGGAACAAAATTGGTTG+TGG 0.548581 8:+48119353 None:intergenic
GATGATGAATCTATGAGAGA+AGG 0.549029 8:+48120517 None:intergenic
TGTTGATGATCAACAAGAGA+TGG 0.550830 8:-48118936 MsG0880044712.01.T01:CDS
AGACCTATTTATTCCTCAGA+GGG 0.557263 8:-48120637 MsG0880044712.01.T01:CDS
CAAGATCTTAACCTTAGCAC+TGG 0.557408 8:-48119136 MsG0880044712.01.T01:CDS
ACACTGAATGGGAATCCAAT+GGG 0.562023 8:+48118902 None:intergenic
GTTGATGTTTCAAGTAAAGG+TGG 0.562150 8:+48119403 None:intergenic
AAGTGTAGTACTACTAGAAG+AGG 0.565912 8:+48119246 None:intergenic
GTATAGAGTTGGCAAGTACA+GGG 0.573043 8:-48120765 MsG0880044712.01.T01:intron
AAGAGCTCTCTCTCACTCAT+GGG 0.573676 8:-48119428 MsG0880044712.01.T01:CDS
TTATAAGATGGAACATCTAA+GGG 0.574187 8:+48119220 None:intergenic
TTGTTACAAGATGTTTCAAG+AGG 0.576354 8:+48119097 None:intergenic
GTAACAACTTCTAACTACAT+TGG 0.580770 8:-48119028 MsG0880044712.01.T01:CDS
GGGTTCATCAGAAGTACAAG+AGG 0.581707 8:+48118826 None:intergenic
CACACTGAATGGGAATCCAA+TGG 0.582826 8:+48118901 None:intergenic
CAAGTACAGGGGAGAAAGAG+TGG 0.591955 8:-48120753 MsG0880044712.01.T01:CDS
CTAATAGGGTAACAAGAGCT+GGG 0.601926 8:-48120684 MsG0880044712.01.T01:CDS
AAAATACTAAGCCAGTGCTA+AGG 0.602217 8:+48119125 None:intergenic
CAGACCTATTTATTCCTCAG+AGG 0.608250 8:-48120638 MsG0880044712.01.T01:CDS
TTGATGTTTCAAGTAAAGGT+GGG 0.610295 8:+48119404 None:intergenic
CTCTCAATATTGGTGATGCA+TGG 0.610941 8:-48118877 MsG0880044712.01.T01:CDS
GTCCAAGAGACAGAAAGTAC+AGG 0.615144 8:-48120720 MsG0880044712.01.T01:CDS
GTTGGATGAAACCTAAACCC+TGG 0.628808 8:+48121537 None:intergenic
TGATCAACAAGAGATGGATA+CGG 0.630429 8:-48118930 MsG0880044712.01.T01:CDS
CATGCATCACCAATATTGAG+AGG 0.634336 8:+48118878 None:intergenic
TTGATGAGCTCAATAGCAAG+AGG 0.642108 8:+48121465 None:intergenic
TACTTGTGAGAAACTTGAAG+AGG 0.650571 8:-48121568 MsG0880044712.01.T01:CDS
CTTGGTAGTAGAATAACTAG+AGG 0.660558 8:+48118805 None:intergenic
TACAAAGGTAGAGCTGCCAA+AGG 0.667663 8:-48120577 MsG0880044712.01.T01:CDS
TAAACCCTAAGTATAACACT+TGG 0.675221 8:+48118787 None:intergenic
TGATGAGCTCAATAGCAAGA+GGG 0.683027 8:+48121466 None:intergenic
TATAGAGTTGGCAAGTACAG+GGG 0.692122 8:-48120764 MsG0880044712.01.T01:intron
TTGGTAGTAGAATAACTAGA+GGG 0.705649 8:+48118806 None:intergenic
AATACACTTAGAACCCTCTG+AGG 0.742862 8:+48120624 None:intergenic
TCTTGTTGATCATCAACACG+AGG 0.747637 8:+48118941 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCACATATATATATATATAT+GGG + Chr8:48120345-48120364 None:intergenic 10.0%
!! ATAATTGGATTATTATAAGA+TGG + Chr8:48121173-48121192 None:intergenic 15.0%
!! ATATTTATAAATTTGATCCA+TGG - Chr8:48118944-48118963 MsG0880044712.01.T01:CDS 15.0%
!! CTCACATATATATATATATA+TGG + Chr8:48120346-48120365 None:intergenic 15.0%
!! TATTTATAAATTTGATCCAT+GGG - Chr8:48118945-48118964 MsG0880044712.01.T01:CDS 15.0%
!! TGTTTATAATAGAAAAACAT+GGG - Chr8:48120244-48120263 MsG0880044712.01.T01:intron 15.0%
!! TTCTAACTAAATATAGATTT+GGG + Chr8:48119944-48119963 None:intergenic 15.0%
!! TTGTTTATAATAGAAAAACA+TGG - Chr8:48120243-48120262 MsG0880044712.01.T01:intron 15.0%
!! AAAGTTTAATAGAGACAAAA+TGG + Chr8:48120180-48120199 None:intergenic 20.0%
!! ATGAGTAATTAGTAAAGTTA+TGG - Chr8:48120454-48120473 MsG0880044712.01.T01:intron 20.0%
!! ATTAGTAAAGTTATGGTATT+TGG - Chr8:48120461-48120480 MsG0880044712.01.T01:intron 20.0%
!! GTGTGTAAATAATATATGTT+GGG - Chr8:48120398-48120417 MsG0880044712.01.T01:intron 20.0%
!! GTTCTAACTAAATATAGATT+TGG + Chr8:48119945-48119964 None:intergenic 20.0%
!! TAAAAAGTAAAGTGATAAAG+AGG + Chr8:48119070-48119089 None:intergenic 20.0%
!! TAAATCAATGGATCAATAAT+TGG + Chr8:48121188-48121207 None:intergenic 20.0%
!! TATATTTAGTTAGAACTTGT+TGG - Chr8:48119949-48119968 MsG0880044712.01.T01:intron 20.0%
!! TGTGTAAATAATATATGTTG+GGG - Chr8:48120399-48120418 MsG0880044712.01.T01:intron 20.0%
!! TGTGTGTAAATAATATATGT+TGG - Chr8:48120397-48120416 MsG0880044712.01.T01:intron 20.0%
!!! CTTTTTTCCTCTTATTTTAA+GGG + Chr8:48120574-48120593 None:intergenic 20.0%
!!! GAAGTAAATTTTACTTACAT+TGG + Chr8:48119922-48119941 None:intergenic 20.0%
!!! GTAATTATTCTTTTAACAAG+TGG + Chr8:48120805-48120824 None:intergenic 20.0%
!!! TCTTTTTTCCTCTTATTTTA+AGG + Chr8:48120575-48120594 None:intergenic 20.0%
! ATCTTGTAACAAAACTTCAA+TGG - Chr8:48121292-48121311 MsG0880044712.01.T01:intron 25.0%
! ATTATAAGATGGAACATCTA+AGG + Chr8:48121162-48121181 None:intergenic 25.0%
! CATGATATACTATAAACCAT+TGG + Chr8:48120437-48120456 None:intergenic 25.0%
! GTGTAAATAATATATGTTGG+GGG - Chr8:48120400-48120419 MsG0880044712.01.T01:intron 25.0%
! GTTATGGTATTTGGATTATA+TGG - Chr8:48120470-48120489 MsG0880044712.01.T01:intron 25.0%
! TAACCTAAAATGCATTTAGT+CGG - Chr8:48120495-48120514 MsG0880044712.01.T01:CDS 25.0%
! TACAAGACCATTACAATAAT+GGG - Chr8:48121378-48121397 MsG0880044712.01.T01:intron 25.0%
! TATAAGGGTTTGTAAATCAA+TGG + Chr8:48121200-48121219 None:intergenic 25.0%
! TATATGTAAGTTACACATCT+AGG + Chr8:48119136-48119155 None:intergenic 25.0%
! TCAAATAAATCAATCGAAAG+AGG + Chr8:48119166-48119185 None:intergenic 25.0%
! TTAAATGCTATTCAACTTGT+AGG - Chr8:48120878-48120897 MsG0880044712.01.T01:intron 25.0%
! TTACAAGACCATTACAATAA+TGG - Chr8:48121377-48121396 MsG0880044712.01.T01:intron 25.0%
! TTATAAGATGGAACATCTAA+GGG + Chr8:48121161-48121180 None:intergenic 25.0%
! TTTGATACATCTTGTTAGAA+TGG - Chr8:48119977-48119996 MsG0880044712.01.T01:intron 25.0%
!! ACAATTTTTGACATGTACAT+AGG - Chr8:48119238-48119257 MsG0880044712.01.T01:CDS 25.0%
!! AGAAAACAATTGAGTCATTT+TGG + Chr8:48120759-48120778 None:intergenic 25.0%
!! AGATCTTGATCATTTGAAAT+TGG + Chr8:48121230-48121249 None:intergenic 25.0%
!! GTTAAGACTTTTTGATATCT+TGG - Chr8:48119551-48119570 MsG0880044712.01.T01:intron 25.0%
!! TAAATTTTACTTACATTGGC+CGG + Chr8:48119918-48119937 None:intergenic 25.0%
!! TGATATTTTGTGTATAGAGT+TGG - Chr8:48119602-48119621 MsG0880044712.01.T01:intron 25.0%
!!! AAATCCTTAGTTTTCTACAA+AGG - Chr8:48119786-48119805 MsG0880044712.01.T01:intron 25.0%
!!! GATTTTTCATCTTTGCTATT+AGG - Chr8:48121314-48121333 MsG0880044712.01.T01:intron 25.0%
!!! TGATAATTTGATGATGTGAT+AGG - Chr8:48120623-48120642 MsG0880044712.01.T01:CDS 25.0%
!!! TGTTTTAGTAAAGTACAAGT+AGG + Chr8:48120157-48120176 None:intergenic 25.0%
!!! TGTTTTGGTAAATAACTAGT+AGG - Chr8:48120267-48120286 MsG0880044712.01.T01:intron 25.0%
ATGGATACCCATTATTGTAA+TGG + Chr8:48121388-48121407 None:intergenic 30.0%
ATTCAACTTGTAGGAATCTT+GGG - Chr8:48120887-48120906 MsG0880044712.01.T01:intron 30.0%
CAAAGTGATAAACACATCTA+GGG + Chr8:48119017-48119036 None:intergenic 30.0%
CATTTGACAAATAATCGAGT+AGG - Chr8:48120367-48120386 MsG0880044712.01.T01:intron 30.0%
GATATACTATAAACCATTGG+AGG + Chr8:48120434-48120453 None:intergenic 30.0%
GTAACAACTTCTAACTACAT+TGG - Chr8:48121350-48121369 MsG0880044712.01.T01:intron 30.0%
GTCTTGTCTACATATTTCTT+TGG + Chr8:48119891-48119910 None:intergenic 30.0%
GTGTGTATACGTATATGTAT+GGG - Chr8:48120078-48120097 MsG0880044712.01.T01:intron 30.0%
TATTCAACTTGTAGGAATCT+TGG - Chr8:48120886-48120905 MsG0880044712.01.T01:intron 30.0%
TCAAAGTGATAAACACATCT+AGG + Chr8:48119018-48119037 None:intergenic 30.0%
TCATGTTTGAGGAACAAAAT+TGG + Chr8:48121034-48121053 None:intergenic 30.0%
TCTACCTTTGTAGAAAACTA+AGG + Chr8:48119793-48119812 None:intergenic 30.0%
TGATTTACAAACCCTTATAC+CGG - Chr8:48121201-48121220 MsG0880044712.01.T01:intron 30.0%
TGTGTATACGTATATGTATG+GGG - Chr8:48120079-48120098 MsG0880044712.01.T01:intron 30.0%
TGTGTGTATACGTATATGTA+TGG - Chr8:48120077-48120096 MsG0880044712.01.T01:intron 30.0%
TTAGGAATGTTAGCCATTAA+TGG + Chr8:48121407-48121426 None:intergenic 30.0%
TTATCCAAACATCGTACTAT+AGG - Chr8:48119519-48119538 MsG0880044712.01.T01:intron 30.0%
TTGTTACAAGATGTTTCAAG+AGG + Chr8:48121284-48121303 None:intergenic 30.0%
! AATCCGACTAAATGCATTTT+AGG + Chr8:48120501-48120520 None:intergenic 30.0%
! ATAGAAAAACATGGGTGTTT+TGG - Chr8:48120252-48120271 MsG0880044712.01.T01:intron 30.0%
! ATCATTTGTTAGAACATTGG+AGG + Chr8:48121000-48121019 None:intergenic 30.0%
! CTTTGTTATCATCATGTTTG+AGG + Chr8:48121045-48121064 None:intergenic 30.0%
! GATCATTTGAAATTGGTAAC+CGG + Chr8:48121223-48121242 None:intergenic 30.0%
! TGCATCATTTGTTAGAACAT+TGG + Chr8:48121003-48121022 None:intergenic 30.0%
! TTGATGTTTCAAGTAAAGGT+GGG + Chr8:48120977-48120996 None:intergenic 30.0%
! TTGGTAGTAGAATAACTAGA+GGG + Chr8:48121575-48121594 None:intergenic 30.0%
!! ACAATTGAGTCATTTTGGAT+CGG + Chr8:48120754-48120773 None:intergenic 30.0%
!! CAATAATGGGTATCCATTAA+TGG - Chr8:48121391-48121410 MsG0880044712.01.T01:intron 30.0%
!!! GTTGCTGAATTTTTTTCTTC+AGG + Chr8:48118891-48118910 None:intergenic 30.0%
!!! TTCATTTTGAAGTGTTTGAC+TGG - Chr8:48120849-48120868 MsG0880044712.01.T01:intron 30.0%
AAAATACTAAGCCAGTGCTA+AGG + Chr8:48121256-48121275 None:intergenic 35.0%
AAGTGTAGTACTACTAGAAG+AGG + Chr8:48121135-48121154 None:intergenic 35.0%
AATATAAGGTTCGCTTGATG+TGG + Chr8:48119108-48119127 None:intergenic 35.0%
ACATCTAGGTAGGGAATATA+AGG + Chr8:48119122-48119141 None:intergenic 35.0%
ACTACCTATAGTACGATGTT+TGG + Chr8:48119526-48119545 None:intergenic 35.0%
AGACCTATTTATTCCTCAGA+GGG - Chr8:48119741-48119760 MsG0880044712.01.T01:intron 35.0%
AGTGTTGTGTTAGGTTATTG+TGG + Chr8:48121109-48121128 None:intergenic 35.0%
ATATGTAGACAAGACCATTC+CGG - Chr8:48119896-48119915 MsG0880044712.01.T01:intron 35.0%
GATGATGAATCTATGAGAGA+AGG + Chr8:48119864-48119883 None:intergenic 35.0%
GCACTATTATGAGTCTTACT+TGG + Chr8:48118976-48118995 None:intergenic 35.0%
GTAAGTTACACATCTAGGTA+GGG + Chr8:48119131-48119150 None:intergenic 35.0%
GTCTACACCCTTAAAATAAG+AGG - Chr8:48120564-48120583 MsG0880044712.01.T01:CDS 35.0%
GTGATAAAGAGGTCAAATAC+TGG + Chr8:48119059-48119078 None:intergenic 35.0%
TACTTGTGAGAAACTTGAAG+AGG - Chr8:48118810-48118829 MsG0880044712.01.T01:CDS 35.0%
TGATCAACAAGAGATGGATA+CGG - Chr8:48121448-48121467 MsG0880044712.01.T01:CDS 35.0%
TGTAAGTTACACATCTAGGT+AGG + Chr8:48119132-48119151 None:intergenic 35.0%
TTGAGGAACAAAATTGGTTG+TGG + Chr8:48121028-48121047 None:intergenic 35.0%
! AAGAGGTTAAGTGTTGTGTT+AGG + Chr8:48121118-48121137 None:intergenic 35.0%
! ACTTGCACCTTAGTGTTTTT+AGG - Chr8:48120302-48120321 MsG0880044712.01.T01:intron 35.0%
! ACTTGCACCTTAGTGTTTTT+AGG + Chr8:48120321-48120302 None:intergenic 35.0%
! CTTGGTAGTAGAATAACTAG+AGG + Chr8:48121576-48121595 None:intergenic 35.0%
! GAAATTGGTAACCGGTATAA+GGG + Chr8:48121215-48121234 None:intergenic 35.0%
! GTTGATGTTTCAAGTAAAGG+TGG + Chr8:48120978-48120997 None:intergenic 35.0%
! TGAAATTGGTAACCGGTATA+AGG + Chr8:48121216-48121235 None:intergenic 35.0%
!! GAAGTCATCAAGTCTTGTTT+GGG - Chr8:48121523-48121542 MsG0880044712.01.T01:CDS 35.0%
!! GAGGTTGATGTTTCAAGTAA+AGG + Chr8:48120981-48121000 None:intergenic 35.0%
!! TGTTGATGATCAACAAGAGA+TGG - Chr8:48121442-48121461 MsG0880044712.01.T01:CDS 35.0%
AATACACTTAGAACCCTCTG+AGG + Chr8:48119757-48119776 None:intergenic 40.0%
ACACTGAATGGGAATCCAAT+GGG + Chr8:48121479-48121498 None:intergenic 40.0%
CAAGATCTTAACCTTAGCAC+TGG - Chr8:48121242-48121261 MsG0880044712.01.T01:intron 40.0%
CAGACCTATTTATTCCTCAG+AGG - Chr8:48119740-48119759 MsG0880044712.01.T01:intron 40.0%
CATGCATCACCAATATTGAG+AGG + Chr8:48121503-48121522 None:intergenic 40.0%
CCAAAGGAGTCAAAACTGAT+TGG - Chr8:48119817-48119836 MsG0880044712.01.T01:intron 40.0%
CCAACAAGTTCTTCATCAGT+TGG + Chr8:48118862-48118881 None:intergenic 40.0%
CCAACTGATGAAGAACTTGT+TGG - Chr8:48118859-48118878 MsG0880044712.01.T01:CDS 40.0%
CTAATAGGGTAACAAGAGCT+GGG - Chr8:48119694-48119713 MsG0880044712.01.T01:intron 40.0%
GAACAGTGCAAGACCTAATA+GGG - Chr8:48119680-48119699 MsG0880044712.01.T01:intron 40.0%
GTATAGAGTTGGCAAGTACA+GGG - Chr8:48119613-48119632 MsG0880044712.01.T01:intron 40.0%
TATAGAGTTGGCAAGTACAG+GGG - Chr8:48119614-48119633 MsG0880044712.01.T01:intron 40.0%
TCTTGTTGATCATCAACACG+AGG + Chr8:48121440-48121459 None:intergenic 40.0%
TGATGAGCTCAATAGCAAGA+GGG + Chr8:48118915-48118934 None:intergenic 40.0%
TGCATTTAGTCGGATTGAGT+TGG - Chr8:48120505-48120524 MsG0880044712.01.T01:CDS 40.0%
TGTATAGAGTTGGCAAGTAC+AGG - Chr8:48119612-48119631 MsG0880044712.01.T01:intron 40.0%
TTCAGTGTGCCTCTCAATAT+TGG - Chr8:48121491-48121510 MsG0880044712.01.T01:CDS 40.0%
TTCCTGTACTTTCTGTCTCT+TGG + Chr8:48119663-48119682 None:intergenic 40.0%
TTGAAGAGGTTATGCTTCCA+GGG - Chr8:48118824-48118843 MsG0880044712.01.T01:CDS 40.0%
TTGATGAGCTCAATAGCAAG+AGG + Chr8:48118916-48118935 None:intergenic 40.0%
TTTACTTACATTGGCCGGAA+TGG + Chr8:48119913-48119932 None:intergenic 40.0%
! ATATTGAGAGGCACACTGAA+TGG + Chr8:48121491-48121510 None:intergenic 40.0%
! GAACCCTCTGAGGAATAAAT+AGG + Chr8:48119747-48119766 None:intergenic 40.0%
! TATTGAGAGGCACACTGAAT+GGG + Chr8:48121490-48121509 None:intergenic 40.0%
!! CTCTCAATATTGGTGATGCA+TGG - Chr8:48121501-48121520 MsG0880044712.01.T01:CDS 40.0%
!! GGAAGTCATCAAGTCTTGTT+TGG - Chr8:48121522-48121541 MsG0880044712.01.T01:CDS 40.0%
!! TCAGAGGGTTCTAAGTGTAT+TGG - Chr8:48119756-48119775 MsG0880044712.01.T01:intron 40.0%
!!! CCAATCAGTTTTGACTCCTT+TGG + Chr8:48119820-48119839 None:intergenic 40.0%
!!! GCACCTTAGTGTTTTTAGGT+GGG - Chr8:48120306-48120325 MsG0880044712.01.T01:intron 40.0%
!!! GCACCTTAGTGTTTTTAGGT+GGG + Chr8:48120325-48120306 None:intergenic 40.0%
!!! TGCACCTTAGTGTTTTTAGG+TGG - Chr8:48120305-48120324 MsG0880044712.01.T01:intron 40.0%
!!! TGCACCTTAGTGTTTTTAGG+TGG + Chr8:48120324-48120305 None:intergenic 40.0%
AAAGAGCTCTCTCTCACTCA+TGG - Chr8:48120949-48120968 MsG0880044712.01.T01:intron 45.0%
AAGAGCTCTCTCTCACTCAT+GGG - Chr8:48120950-48120969 MsG0880044712.01.T01:intron 45.0%
AGCTCTTTGAGCTGTAGCAT+TGG + Chr8:48120937-48120956 None:intergenic 45.0%
AGGAATCTTGGGCAATATGC+AGG - Chr8:48120898-48120917 MsG0880044712.01.T01:intron 45.0%
AGGTTATGCTTCCAGGGTTT+AGG - Chr8:48118830-48118849 MsG0880044712.01.T01:CDS 45.0%
CACACTGAATGGGAATCCAA+TGG + Chr8:48121480-48121499 None:intergenic 45.0%
CCAGCTCTTGTTACCCTATT+AGG + Chr8:48119696-48119715 None:intergenic 45.0%
CCTAATAGGGTAACAAGAGC+TGG - Chr8:48119693-48119712 MsG0880044712.01.T01:intron 45.0%
CTTGAAGAGGTTATGCTTCC+AGG - Chr8:48118823-48118842 MsG0880044712.01.T01:CDS 45.0%
GCACCCACCTAAAAACACTA+AGG - Chr8:48120112-48120131 MsG0880044712.01.T01:intron 45.0%
GCACCCACCTAAAAACACTA+AGG + Chr8:48120131-48120112 None:intergenic 45.0%
GGAACAGTGCAAGACCTAAT+AGG - Chr8:48119679-48119698 MsG0880044712.01.T01:intron 45.0%
GGGGGATTATAATCCTCCAA+TGG - Chr8:48120418-48120437 MsG0880044712.01.T01:intron 45.0%
GTCTTACTTGGTAGATCCCA+TGG + Chr8:48118964-48118983 None:intergenic 45.0%
GTTGGATGAAACCTAAACCC+TGG + Chr8:48118844-48118863 None:intergenic 45.0%
TACAAAGGTAGAGCTGCCAA+AGG - Chr8:48119801-48119820 MsG0880044712.01.T01:intron 45.0%
TGTGGTGCGCACGAAAAATT+AGG + Chr8:48120537-48120556 None:intergenic 45.0%
! CTAGAGTGACTTGCAAAGCT+AGG + Chr8:48121071-48121090 None:intergenic 45.0%
! GGGTTCATCAGAAGTACAAG+AGG + Chr8:48121555-48121574 None:intergenic 45.0%
! GTCCAAGAGACAGAAAGTAC+AGG - Chr8:48119658-48119677 MsG0880044712.01.T01:intron 45.0%
!!! TAAACTTTATTTTAATTAAA+AGG - Chr8:48120192-48120211 MsG0880044712.01.T01:intron 5.0%
ATGGATACGGTTCGACCCAT+TGG - Chr8:48121461-48121480 MsG0880044712.01.T01:CDS 50.0%
CAAGTACAGGGGAGAAAGAG+TGG - Chr8:48119625-48119644 MsG0880044712.01.T01:intron 50.0%
! GGGTAACAAGAGCTGGGTTT+TGG - Chr8:48119700-48119719 MsG0880044712.01.T01:intron 50.0%
! TTTTCGTGCGCACCACATGT+GGG - Chr8:48120540-48120559 MsG0880044712.01.T01:CDS 50.0%
! TTTTTCGTGCGCACCACATG+TGG - Chr8:48120539-48120558 MsG0880044712.01.T01:CDS 50.0%
!!! GCTGGGTTTTGGAAAGCAAC+AGG - Chr8:48119711-48119730 MsG0880044712.01.T01:intron 50.0%
ACACGAGGCACGTTCGCATT+AGG + Chr8:48121425-48121444 None:intergenic 55.0%
AGGGTGTAGACACCCACATG+TGG + Chr8:48120555-48120574 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr8 gene 48118793 48121607 48118793 ID=MsG0880044712.01;Name=MsG0880044712.01
Chr8 mRNA 48118793 48121607 48118793 ID=MsG0880044712.01.T01;Parent=MsG0880044712.01;Name=MsG0880044712.01.T01;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|1|1|3|0|398
Chr8 exon 48121424 48121607 48121424 ID=MsG0880044712.01.T01:exon:19838;Parent=MsG0880044712.01.T01
Chr8 exon 48120477 48120781 48120477 ID=MsG0880044712.01.T01:exon:19837;Parent=MsG0880044712.01.T01
Chr8 exon 48118793 48119500 48118793 ID=MsG0880044712.01.T01:exon:19836;Parent=MsG0880044712.01.T01
Chr8 CDS 48121424 48121607 48121424 ID=MsG0880044712.01.T01:cds;Parent=MsG0880044712.01.T01
Chr8 CDS 48120477 48120781 48120477 ID=MsG0880044712.01.T01:cds;Parent=MsG0880044712.01.T01
Chr8 CDS 48118793 48119500 48118793 ID=MsG0880044712.01.T01:cds;Parent=MsG0880044712.01.T01
Gene Sequence

>MsG0880044712.01.T01

ATGGAAGAGAGAAATGGTACTTGTGAGAAACTTGAAGAGGTTATGCTTCCAGGGTTTAGGTTTCATCCAACTGATGAAGAACTTGTTGGATTTTACCTGAAGAAAAAAATTCAGCAACACCCTCTTGCTATTGAGCTCATCAAGCAGCTTGATATTTATAAATTTGATCCATGGGATCTACCAAAGTTGGCAAGTACAGGGGAGAAAGAGTGGTATTTTTACTGTCCAAGAGACAGAAAGTACAGGAACAGTGCAAGACCTAATAGGGTAACAAGAGCTGGGTTTTGGAAAGCAACAGGAACAGACAGACCTATTTATTCCTCAGAGGGTTCTAAGTGTATTGGCTTGAAAAAATCCTTAGTTTTCTACAAAGGTAGAGCTGCCAAAGGAGTCAAAACTGATTGGATGATGCATGAGTTTAGACTACCTTCTCTCATAGATTCATCATCATCTCCAAAGAAATATGTAGACAAGACCATTCCGGCCAATGAATCTTGGGCAATATGCAGGATATTCAAGAAAACCAATGCTACAGCTCAAAGAGCTCTCTCTCACTCATGGGTCCCACCTTTACTTGAAACATCAACCTCCAATGTTCTAACAAATGATGCAAACCACAACCAATTTTGTTCCTCAAACATGATGATAACAAAGAAACCTAGCTTTGCAAGTCACTCTAGTACTACTACTAATAACCACAATAACCTAACACAACACTTAACCTCTTCTAGTAGTACTACACTTTGTCCCTTAGATGTTCCATCTTATAATAATCCAATTATTGATCCATTGATTTACAAACCCTTATACCGGTTACCAATTTCAAATGATCAAGATCTTAACCTTAGCACTGGCTTAGTATTTTCATCTCCTCTTGAAACATCTTGTAACAAAACTTCAATGGATTTTTCATCTTTGCTATTAGGTATGTCATCTGAAGTAACAACTTCTAACTACATTGGTAATTTACAAGACCATTACAATAATGGGTATCCATTAATGGCTAACATTCCTAATGCGAACGTGCCTCGTGTTGATGATCAACAAGAGATGGATACGGTTCGACCCATTGGATTCCCATTCAGTGTGCCTCTCAATATTGGTGATGCATGGAAGTCATCAAGTCTTGTTTGGGATACTTCCTCTTGTACTTCTGATGAACCCTCTAGTTATTCTACTACCAAGTGTTATACTTAG

Protein sequence

>MsG0880044712.01.T01

MEERNGTCEKLEEVMLPGFRFHPTDEELVGFYLKKKIQQHPLAIELIKQLDIYKFDPWDLPKLASTGEKEWYFYCPRDRKYRNSARPNRVTRAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLIDSSSSPKKYVDKTIPANESWAICRIFKKTNATAQRALSHSWVPPLLETSTSNVLTNDANHNQFCSSNMMITKKPSFASHSSTTTNNHNNLTQHLTSSSSTTLCPLDVPSYNNPIIDPLIYKPLYRLPISNDQDLNLSTGLVFSSPLETSCNKTSMDFSSLLLGMSSEVTTSNYIGNLQDHYNNGYPLMANIPNANVPRVDDQQEMDTVRPIGFPFSVPLNIGDAWKSSSLVWDTSSCTSDEPSSYSTTKCYT*