Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020797.01.T01 | XP_003606383.1 | 85.246 | 244 | 11 | 4 | 6 | 247 | 65 | 285 | 1.72E-135 | 393 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020797.01.T01 | Q9ATM4 | 75.918 | 245 | 33 | 4 | 6 | 247 | 66 | 287 | 3.13E-123 | 354 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020797.01.T01 | G7JPC5 | 85.246 | 244 | 11 | 4 | 6 | 247 | 65 | 285 | 8.23e-136 | 393 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000011.01 | MsG0480020797.01 | 0.836578 | 8.620779e-57 | 1.090892e-53 |
| MsG0180000029.01 | MsG0480020797.01 | 0.819568 | 1.084784e-52 | 8.378280e-50 |
| MsG0180000040.01 | MsG0480020797.01 | -0.807383 | 5.191539e-50 | 2.887519e-47 |
| MsG0180000466.01 | MsG0480020797.01 | 0.826949 | 2.048160e-54 | 1.949296e-51 |
| MsG0180000489.01 | MsG0480020797.01 | -0.808157 | 3.554804e-50 | 2.017676e-47 |
| MsG0180000490.01 | MsG0480020797.01 | -0.804605 | 1.993358e-49 | 1.032223e-46 |
| MsG0180000491.01 | MsG0480020797.01 | -0.815676 | 8.182462e-52 | 5.678574e-49 |
| MsG0180000942.01 | MsG0480020797.01 | -0.848237 | 6.965978e-60 | 1.270020e-56 |
| MsG0180000976.01 | MsG0480020797.01 | -0.863280 | 2.786887e-64 | 8.402679e-61 |
| MsG0180001029.01 | MsG0480020797.01 | 0.815138 | 1.077766e-51 | 7.369397e-49 |
| MsG0180001523.01 | MsG0480020797.01 | -0.842398 | 2.649988e-58 | 4.013266e-55 |
| MsG0180001548.01 | MsG0480020797.01 | -0.848736 | 5.067307e-60 | 9.390190e-57 |
| MsG0180002891.01 | MsG0480020797.01 | -0.822755 | 1.999029e-53 | 1.688478e-50 |
| MsG0180003196.01 | MsG0480020797.01 | -0.837652 | 4.580424e-57 | 5.989982e-54 |
| MsG0180003320.01 | MsG0480020797.01 | 0.804802 | 1.813359e-49 | 9.438546e-47 |
| MsG0180004202.01 | MsG0480020797.01 | 0.828298 | 9.715908e-55 | 9.617536e-52 |
| MsG0180004326.01 | MsG0480020797.01 | 0.816021 | 6.853889e-52 | 4.801594e-49 |
| MsG0180004792.01 | MsG0480020797.01 | -0.848740 | 5.053671e-60 | 9.366454e-57 |
| MsG0180005146.01 | MsG0480020797.01 | 0.801550 | 8.539727e-49 | 4.089740e-46 |
| MsG0180005184.01 | MsG0480020797.01 | -0.810699 | 1.012499e-50 | 6.145995e-48 |
| MsG0180005338.01 | MsG0480020797.01 | -0.808587 | 2.878752e-50 | 1.652361e-47 |
| MsG0180005339.01 | MsG0480020797.01 | -0.844532 | 7.130435e-59 | 1.154607e-55 |
| MsG0180005416.01 | MsG0480020797.01 | -0.807411 | 5.120692e-50 | 2.850238e-47 |
| MsG0180005741.01 | MsG0480020797.01 | 0.811098 | 8.297763e-51 | 5.090509e-48 |
| MsG0180005898.01 | MsG0480020797.01 | -0.852587 | 4.186581e-61 | 8.789198e-58 |
| MsG0180006027.01 | MsG0480020797.01 | 0.821550 | 3.803966e-53 | 3.104450e-50 |
| MsG0180006183.01 | MsG0480020797.01 | 0.828389 | 9.237148e-55 | 9.168616e-52 |
| MsG0180006253.01 | MsG0480020797.01 | 0.857057 | 2.115514e-62 | 5.154476e-59 |
| MsG0280006319.01 | MsG0480020797.01 | -0.828956 | 6.739065e-55 | 6.799612e-52 |
| MsG0280011020.01 | MsG0480020797.01 | -0.804432 | 2.166853e-49 | 1.117025e-46 |
| MsG0280011036.01 | MsG0480020797.01 | -0.818338 | 2.064612e-52 | 1.541271e-49 |
| MsG0280011110.01 | MsG0480020797.01 | 0.820332 | 7.253295e-53 | 5.722138e-50 |
| MsG0280011218.01 | MsG0480020797.01 | -0.831510 | 1.602629e-55 | 1.742903e-52 |
| MsG0280011362.01 | MsG0480020797.01 | -0.879587 | 1.103220e-69 | 6.015391e-66 |
| MsG0380012222.01 | MsG0480020797.01 | 0.818865 | 1.568282e-52 | 1.187892e-49 |
| MsG0380012931.01 | MsG0480020797.01 | -0.853286 | 2.642211e-61 | 5.679798e-58 |
| MsG0380014144.01 | MsG0480020797.01 | -0.806087 | 9.751243e-50 | 5.245587e-47 |
| MsG0380014517.01 | MsG0480020797.01 | -0.801682 | 8.023278e-49 | 3.855208e-46 |
| MsG0380014646.01 | MsG0480020797.01 | -0.835309 | 1.808330e-56 | 2.203077e-53 |
| MsG0480019812.01 | MsG0480020797.01 | -0.824805 | 6.613647e-54 | 5.921021e-51 |
| MsG0480020448.01 | MsG0480020797.01 | 0.826471 | 2.664438e-54 | 2.500996e-51 |
| MsG0480020473.01 | MsG0480020797.01 | -0.845633 | 3.594933e-59 | 6.028511e-56 |
| MsG0480020689.01 | MsG0480020797.01 | -0.853059 | 3.068393e-61 | 6.545229e-58 |
| MsG0480020704.01 | MsG0480020797.01 | -0.811554 | 6.607022e-51 | 4.102306e-48 |
| MsG0480020797.01 | MsG0480020904.01 | 0.810079 | 1.377662e-50 | 8.226352e-48 |
| MsG0480020797.01 | MsG0480021564.01 | -0.807916 | 4.000009e-50 | 2.255775e-47 |
| MsG0480020797.01 | MsG0480021830.01 | -0.831275 | 1.830769e-55 | 1.977014e-52 |
| MsG0480020797.01 | MsG0480021892.01 | -0.827531 | 1.486490e-54 | 1.438859e-51 |
| MsG0480020797.01 | MsG0480022154.01 | -0.827857 | 1.241196e-54 | 1.212999e-51 |
| MsG0480020797.01 | MsG0480022226.01 | -0.813514 | 2.463210e-51 | 1.611925e-48 |
| MsG0480020797.01 | MsG0480022240.01 | -0.843866 | 1.076297e-58 | 1.706856e-55 |
| MsG0480020797.01 | MsG0480022664.01 | -0.814423 | 1.552555e-51 | 1.041371e-48 |
| MsG0480020797.01 | MsG0480022918.01 | -0.818231 | 2.182989e-52 | 1.624675e-49 |
| MsG0480020797.01 | MsG0480023169.01 | -0.808694 | 2.730958e-50 | 1.571891e-47 |
| MsG0480020797.01 | MsG0480023454.01 | 0.844346 | 8.001853e-59 | 1.288094e-55 |
| MsG0480020797.01 | MsG0480023466.01 | -0.813710 | 2.230646e-51 | 1.467526e-48 |
| MsG0480020797.01 | MsG0480023507.01 | -0.802793 | 4.739720e-49 | 2.342937e-46 |
| MsG0480020797.01 | MsG0580024471.01 | -0.852542 | 4.311014e-61 | 9.037813e-58 |
| MsG0480020797.01 | MsG0580024538.01 | -0.808088 | 3.677974e-50 | 2.083681e-47 |
| MsG0480020797.01 | MsG0580024598.01 | -0.819325 | 1.232214e-52 | 9.451838e-50 |
| MsG0480020797.01 | MsG0580024764.01 | -0.807490 | 4.928811e-50 | 2.749026e-47 |
| MsG0480020797.01 | MsG0580024872.01 | -0.844055 | 9.578515e-59 | 1.528129e-55 |
| MsG0480020797.01 | MsG0580025252.01 | -0.809195 | 2.133821e-50 | 1.244757e-47 |
| MsG0480020797.01 | MsG0580025558.01 | 0.816296 | 5.950121e-52 | 4.200055e-49 |
| MsG0480020797.01 | MsG0580025564.01 | -0.801044 | 1.083947e-48 | 5.125742e-46 |
| MsG0480020797.01 | MsG0580025565.01 | -0.846937 | 1.586487e-59 | 2.774830e-56 |
| MsG0480020797.01 | MsG0580027732.01 | -0.813219 | 2.859623e-51 | 1.856225e-48 |
| MsG0480020797.01 | MsG0580027899.01 | -0.831110 | 2.010372e-55 | 2.160367e-52 |
| MsG0480020797.01 | MsG0580028177.01 | -0.806296 | 8.811250e-50 | 4.765274e-47 |
| MsG0480020797.01 | MsG0580028179.01 | -0.817414 | 3.338775e-52 | 2.429983e-49 |
| MsG0480020797.01 | MsG0580028397.01 | -0.807996 | 3.847388e-50 | 2.174378e-47 |
| MsG0480020797.01 | MsG0580028403.01 | -0.808469 | 3.049776e-50 | 1.745263e-47 |
| MsG0480020797.01 | MsG0580028495.01 | -0.803672 | 3.117893e-49 | 1.576191e-46 |
| MsG0480020797.01 | MsG0580029235.01 | 0.810026 | 1.414273e-50 | 8.433933e-48 |
| MsG0480020797.01 | MsG0580029682.01 | -0.823648 | 1.236911e-53 | 1.071445e-50 |
| MsG0480020797.01 | MsG0580030063.01 | -0.810029 | 1.412507e-50 | 8.423943e-48 |
| MsG0480020797.01 | MsG0580030141.01 | 0.837738 | 4.354297e-57 | 5.709259e-54 |
| MsG0480020797.01 | MsG0680031200.01 | 0.801903 | 7.227599e-49 | 3.492586e-46 |
| MsG0480020797.01 | MsG0680031406.01 | -0.827645 | 1.395542e-54 | 1.355271e-51 |
| MsG0480020797.01 | MsG0680034238.01 | 0.831371 | 1.733576e-55 | 1.877508e-52 |
| MsG0480020797.01 | MsG0680034402.01 | -0.840741 | 7.244993e-58 | 1.041740e-54 |
| MsG0480020797.01 | MsG0680035344.01 | 0.802521 | 5.392453e-49 | 2.646980e-46 |
| MsG0480020797.01 | MsG0680035664.01 | -0.839322 | 1.698052e-57 | 2.336646e-54 |
| MsG0480020797.01 | MsG0680035665.01 | -0.894170 | 3.170675e-75 | 3.116929e-71 |
| MsG0480020797.01 | MsG0780036008.01 | -0.815849 | 7.489309e-52 | 5.221591e-49 |
| MsG0480020797.01 | MsG0780036060.01 | 0.800681 | 1.285932e-48 | 6.024528e-46 |
| MsG0480020797.01 | MsG0780036260.01 | 0.800095 | 1.692272e-48 | 7.811456e-46 |
| MsG0480020797.01 | MsG0780036846.01 | -0.818032 | 2.421625e-52 | 1.792453e-49 |
| MsG0480020797.01 | MsG0780037052.01 | 0.876766 | 1.075512e-68 | 5.278008e-65 |
| MsG0480020797.01 | MsG0780038318.01 | 0.807687 | 4.475998e-50 | 2.509189e-47 |
| MsG0480020797.01 | MsG0780038919.01 | 0.809539 | 1.800349e-50 | 1.059877e-47 |
| MsG0480020797.01 | MsG0780039805.01 | -0.817134 | 3.859280e-52 | 2.787260e-49 |
| MsG0480020797.01 | MsG0780039986.01 | -0.800803 | 1.214194e-48 | 5.706058e-46 |
| MsG0480020797.01 | MsG0780040155.01 | -0.810348 | 1.205163e-50 | 7.247235e-48 |
| MsG0480020797.01 | MsG0780040560.01 | 0.826240 | 3.023492e-54 | 2.819570e-51 |
| MsG0480020797.01 | MsG0780040670.01 | 0.817665 | 2.931687e-52 | 2.148327e-49 |
| MsG0480020797.01 | MsG0780040716.01 | 0.817147 | 3.834923e-52 | 2.770581e-49 |
| MsG0480020797.01 | MsG0780040965.01 | -0.806966 | 6.364442e-50 | 3.501582e-47 |
| MsG0480020797.01 | MsG0780041129.01 | -0.829691 | 4.467239e-55 | 4.606363e-52 |
| MsG0480020797.01 | MsG0780041823.01 | 0.818547 | 1.852026e-52 | 1.390523e-49 |
| MsG0480020797.01 | MsG0880042000.01 | -0.816527 | 5.282055e-52 | 3.751891e-49 |
| MsG0480020797.01 | MsG0880042084.01 | -0.816761 | 4.681362e-52 | 3.346609e-49 |
| MsG0480020797.01 | MsG0880042086.01 | -0.807176 | 5.745094e-50 | 3.178166e-47 |
| MsG0480020797.01 | MsG0880042256.01 | -0.852153 | 5.564699e-61 | 1.152279e-57 |
| MsG0480020797.01 | MsG0880042415.01 | -0.826143 | 3.188462e-54 | 2.965202e-51 |
| MsG0480020797.01 | MsG0880042416.01 | -0.822477 | 2.320180e-53 | 1.944172e-50 |
| MsG0480020797.01 | MsG0880042417.01 | -0.816518 | 5.307300e-52 | 3.768803e-49 |
| MsG0480020797.01 | MsG0880042849.01 | 0.802903 | 4.499060e-49 | 2.230143e-46 |
| MsG0480020797.01 | MsG0880043021.01 | -0.820457 | 6.791042e-53 | 5.376420e-50 |
| MsG0480020797.01 | MsG0880043056.01 | -0.812821 | 3.495886e-51 | 2.245089e-48 |
| MsG0480020797.01 | MsG0880043107.01 | -0.852135 | 5.629164e-61 | 1.164950e-57 |
| MsG0480020797.01 | MsG0880043495.01 | 0.873567 | 1.330559e-67 | 5.801229e-64 |
| MsG0480020797.01 | MsG0880043621.01 | -0.852139 | 5.617053e-61 | 1.162603e-57 |
| MsG0480020797.01 | MsG0880044099.01 | -0.817153 | 3.821723e-52 | 2.761591e-49 |
| MsG0480020797.01 | MsG0880044105.01 | -0.818485 | 1.913099e-52 | 1.433892e-49 |
| MsG0480020797.01 | MsG0880044317.01 | -0.809969 | 1.454580e-50 | 8.661118e-48 |
| MsG0480020797.01 | MsG0880044712.01 | 0.802771 | 4.789661e-49 | 2.366278e-46 |
| MsG0480020797.01 | MsG0880044834.01 | -0.831386 | 1.718763e-55 | 1.862340e-52 |
| MsG0480020797.01 | MsG0880045394.01 | -0.804235 | 2.381027e-49 | 1.221211e-46 |
| MsG0480020797.01 | MsG0880045761.01 | -0.836137 | 1.115825e-56 | 1.393572e-53 |
| MsG0480020797.01 | MsG0880045958.01 | 0.812833 | 3.474002e-51 | 2.231764e-48 |
| MsG0480020797.01 | MsG0880046324.01 | -0.831453 | 1.654714e-55 | 1.796561e-52 |
| MsG0480020797.01 | MsG0880046408.01 | -0.864122 | 1.526022e-64 | 4.737998e-61 |
| MsG0480020797.01 | MsG0880046434.01 | 0.805830 | 1.104477e-49 | 5.902523e-47 |
| MsG0480020797.01 | MsG0880046923.01 | 0.805855 | 1.091370e-49 | 5.836357e-47 |
| MsG0480020797.01 | MsG0880047312.01 | 0.800489 | 1.407103e-48 | 6.560319e-46 |
| MsG0380015393.01 | MsG0480020797.01 | 0.826442 | 2.707130e-54 | 2.539140e-51 |
| MsG0380016066.01 | MsG0480020797.01 | -0.822777 | 1.975795e-53 | 1.669818e-50 |
| MsG0380016151.01 | MsG0480020797.01 | -0.818768 | 1.649856e-52 | 1.246300e-49 |
| MsG0380016490.01 | MsG0480020797.01 | 0.825486 | 4.566949e-54 | 4.168216e-51 |
| MsG0380016527.01 | MsG0480020797.01 | -0.805307 | 1.422092e-49 | 7.498143e-47 |
| MsG0380016997.01 | MsG0480020797.01 | -0.831721 | 1.421315e-55 | 1.555631e-52 |
| MsG0380017200.01 | MsG0480020797.01 | 0.827213 | 1.771663e-54 | 1.699217e-51 |
| MsG0380017353.01 | MsG0480020797.01 | -0.805685 | 1.184915e-49 | 6.308997e-47 |
| MsG0380017666.01 | MsG0480020797.01 | 0.816490 | 5.384925e-52 | 3.820837e-49 |
| MsG0480018337.01 | MsG0480020797.01 | -0.814224 | 1.718052e-51 | 1.146089e-48 |
| MsG0480018338.01 | MsG0480020797.01 | -0.810826 | 9.503874e-51 | 5.788561e-48 |
| MsG0280007085.01 | MsG0480020797.01 | 0.832074 | 1.163261e-55 | 1.286301e-52 |
| MsG0280007423.01 | MsG0480020797.01 | -0.816998 | 4.140672e-52 | 2.979567e-49 |
| MsG0280007511.01 | MsG0480020797.01 | -0.820937 | 5.266429e-53 | 4.225477e-50 |
| MsG0280007689.01 | MsG0480020797.01 | 0.806762 | 7.026223e-50 | 3.845402e-47 |
| MsG0280008072.01 | MsG0480020797.01 | -0.848208 | 7.097235e-60 | 1.292651e-56 |
| MsG0280008139.01 | MsG0480020797.01 | -0.813744 | 2.192073e-51 | 1.443389e-48 |
| MsG0280008419.01 | MsG0480020797.01 | -0.804164 | 2.463182e-49 | 1.261113e-46 |
| MsG0280009435.01 | MsG0480020797.01 | -0.813162 | 2.942714e-51 | 1.907196e-48 |
| MsG0280009436.01 | MsG0480020797.01 | -0.808514 | 2.983322e-50 | 1.709205e-47 |
| MsG0280009675.01 | MsG0480020797.01 | -0.825046 | 5.801795e-54 | 5.229985e-51 |
| MsG0280010253.01 | MsG0480020797.01 | -0.806600 | 7.601452e-50 | 4.142997e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020797.01.T01 | MTR_4g059390 | 85.246 | 244 | 11 | 4 | 6 | 247 | 65 | 285 | 2.09e-139 | 393 |
| MsG0480020797.01.T01 | MTR_2g094270 | 73.279 | 247 | 42 | 3 | 2 | 247 | 64 | 287 | 1.32e-121 | 348 |
| MsG0480020797.01.T01 | MTR_7g101190 | 71.951 | 246 | 44 | 4 | 4 | 247 | 63 | 285 | 1.33e-118 | 340 |
| MsG0480020797.01.T01 | MTR_3g118010 | 70.168 | 238 | 47 | 3 | 10 | 246 | 62 | 276 | 3.34e-111 | 321 |
| MsG0480020797.01.T01 | MTR_2g094270 | 81.283 | 187 | 34 | 1 | 2 | 187 | 64 | 250 | 4.24e-109 | 315 |
| MsG0480020797.01.T01 | MTR_1g095070 | 71.689 | 219 | 38 | 3 | 29 | 246 | 23 | 218 | 2.54e-104 | 301 |
| MsG0480020797.01.T01 | MTR_1g095070 | 83.750 | 160 | 25 | 1 | 29 | 187 | 23 | 182 | 5.36e-95 | 277 |
| MsG0480020797.01.T01 | MTR_4g415300 | 61.039 | 231 | 66 | 3 | 10 | 239 | 81 | 288 | 3.00e-92 | 273 |
| MsG0480020797.01.T01 | MTR_5g010150 | 62.500 | 232 | 62 | 4 | 10 | 239 | 77 | 285 | 3.31e-92 | 273 |
| MsG0480020797.01.T01 | MTR_8g098375 | 61.472 | 231 | 64 | 4 | 10 | 238 | 77 | 284 | 5.35e-92 | 273 |
| MsG0480020797.01.T01 | MTR_5g082070 | 62.069 | 232 | 63 | 4 | 10 | 239 | 80 | 288 | 5.01e-91 | 270 |
| MsG0480020797.01.T01 | MTR_3g070210 | 60.776 | 232 | 66 | 3 | 10 | 239 | 80 | 288 | 3.30e-90 | 268 |
| MsG0480020797.01.T01 | MTR_4g059390 | 96.377 | 138 | 3 | 2 | 6 | 141 | 65 | 202 | 4.72e-90 | 265 |
| MsG0480020797.01.T01 | MTR_3g070210 | 72.222 | 180 | 48 | 1 | 10 | 187 | 80 | 259 | 1.98e-89 | 266 |
| MsG0480020797.01.T01 | MTR_8g098375 | 64.706 | 153 | 50 | 3 | 10 | 158 | 77 | 229 | 4.52e-63 | 197 |
| MsG0480020797.01.T01 | MTR_5g010150 | 72.388 | 134 | 35 | 2 | 10 | 141 | 77 | 210 | 8.44e-62 | 193 |
| MsG0480020797.01.T01 | MTR_3g070210 | 70.896 | 134 | 37 | 1 | 10 | 141 | 80 | 213 | 1.96e-61 | 192 |
| MsG0480020797.01.T01 | MTR_4g415300 | 69.925 | 133 | 39 | 1 | 10 | 141 | 81 | 213 | 5.10e-61 | 192 |
| MsG0480020797.01.T01 | MTR_8g013680 | 38.679 | 212 | 106 | 8 | 16 | 219 | 52 | 247 | 1.67e-23 | 95.5 |
| MsG0480020797.01.T01 | MTR_2g101370 | 38.857 | 175 | 93 | 4 | 10 | 180 | 47 | 211 | 2.16e-23 | 95.5 |
| MsG0480020797.01.T01 | MTR_5g012810 | 41.216 | 148 | 78 | 3 | 31 | 177 | 67 | 206 | 6.18e-22 | 91.3 |
| MsG0480020797.01.T01 | MTR_4g063090 | 40.132 | 152 | 75 | 4 | 31 | 177 | 69 | 209 | 2.89e-20 | 87.0 |
| MsG0480020797.01.T01 | MTR_1g115405 | 39.326 | 178 | 97 | 6 | 1 | 177 | 42 | 209 | 9.79e-20 | 85.5 |
| MsG0480020797.01.T01 | MTR_1g077540 | 36.905 | 168 | 96 | 4 | 11 | 177 | 51 | 209 | 5.11e-19 | 84.0 |
| MsG0480020797.01.T01 | MTR_7g103030 | 39.103 | 156 | 84 | 4 | 23 | 177 | 63 | 208 | 9.66e-19 | 82.8 |
| MsG0480020797.01.T01 | MTR_6g069040 | 40.278 | 144 | 78 | 4 | 35 | 177 | 73 | 209 | 4.82e-18 | 80.9 |
| MsG0480020797.01.T01 | MTR_1g006590 | 30.769 | 208 | 126 | 7 | 7 | 206 | 37 | 234 | 8.30e-16 | 74.7 |
| MsG0480020797.01.T01 | MTR_7g023350 | 36.943 | 157 | 81 | 5 | 26 | 177 | 66 | 209 | 1.02e-15 | 74.7 |
| MsG0480020797.01.T01 | MTR_8g087710 | 31.792 | 173 | 108 | 5 | 14 | 184 | 64 | 228 | 1.15e-15 | 74.7 |
| MsG0480020797.01.T01 | MTR_1g006490 | 30.660 | 212 | 120 | 8 | 5 | 206 | 40 | 234 | 2.86e-15 | 73.2 |
| MsG0480020797.01.T01 | MTR_5g079570 | 31.325 | 166 | 101 | 5 | 22 | 184 | 73 | 228 | 1.91e-14 | 71.2 |
| MsG0480020797.01.T01 | MTR_2g017660 | 31.902 | 163 | 103 | 3 | 18 | 180 | 69 | 223 | 1.69e-13 | 68.9 |
| MsG0480020797.01.T01 | MTR_2g060360 | 36.047 | 172 | 95 | 5 | 9 | 177 | 47 | 206 | 4.12e-13 | 67.4 |
| MsG0480020797.01.T01 | MTR_5g063930 | 30.994 | 171 | 106 | 4 | 18 | 184 | 65 | 227 | 7.86e-13 | 66.6 |
| MsG0480020797.01.T01 | MTR_2g017610 | 32.143 | 168 | 97 | 6 | 22 | 184 | 72 | 227 | 2.39e-12 | 65.5 |
| MsG0480020797.01.T01 | MTR_2g017620 | 30.952 | 168 | 107 | 4 | 18 | 184 | 68 | 227 | 2.94e-12 | 65.1 |
| MsG0480020797.01.T01 | MTR_2g017620 | 30.952 | 168 | 107 | 4 | 18 | 184 | 54 | 213 | 3.09e-12 | 65.1 |
| MsG0480020797.01.T01 | MTR_4g084880 | 29.012 | 162 | 99 | 3 | 22 | 179 | 71 | 220 | 3.92e-12 | 64.7 |
| MsG0480020797.01.T01 | MTR_7g010650 | 29.944 | 177 | 104 | 5 | 14 | 184 | 63 | 225 | 3.96e-12 | 64.7 |
| MsG0480020797.01.T01 | MTR_2g017570 | 30.539 | 167 | 101 | 5 | 22 | 184 | 72 | 227 | 4.67e-12 | 64.7 |
| MsG0480020797.01.T01 | MTR_2g017590 | 32.749 | 171 | 100 | 5 | 18 | 184 | 66 | 225 | 7.18e-12 | 63.9 |
| MsG0480020797.01.T01 | MTR_4g006730 | 30.723 | 166 | 105 | 4 | 20 | 184 | 20 | 176 | 1.45e-11 | 62.4 |
| MsG0480020797.01.T01 | MTR_4g006630 | 30.723 | 166 | 105 | 4 | 20 | 184 | 20 | 176 | 1.50e-11 | 62.4 |
| MsG0480020797.01.T01 | MTR_2g104940 | 31.548 | 168 | 101 | 5 | 20 | 184 | 112 | 268 | 2.44e-11 | 62.8 |
| MsG0480020797.01.T01 | MTR_8g087720 | 31.579 | 171 | 102 | 5 | 18 | 184 | 68 | 227 | 2.76e-11 | 62.4 |
| MsG0480020797.01.T01 | MTR_4g006730 | 30.723 | 166 | 105 | 4 | 20 | 184 | 107 | 263 | 2.81e-11 | 62.8 |
| MsG0480020797.01.T01 | MTR_3g008920 | 29.518 | 166 | 104 | 5 | 22 | 184 | 59 | 214 | 3.44e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020797.01.T01 | AT2G37170 | 71.545 | 246 | 45 | 4 | 4 | 247 | 104 | 326 | 2.19e-115 | 333 |
| MsG0480020797.01.T01 | AT2G37170 | 71.545 | 246 | 45 | 4 | 4 | 247 | 61 | 283 | 5.98e-115 | 331 |
| MsG0480020797.01.T01 | AT2G37180 | 69.919 | 246 | 49 | 4 | 4 | 247 | 61 | 283 | 5.15e-112 | 323 |
| MsG0480020797.01.T01 | AT5G60660 | 69.835 | 242 | 48 | 3 | 6 | 245 | 65 | 283 | 2.64e-111 | 322 |
| MsG0480020797.01.T01 | AT4G35100 | 71.130 | 239 | 45 | 3 | 10 | 247 | 63 | 278 | 3.74e-111 | 321 |
| MsG0480020797.01.T01 | AT4G35100 | 71.130 | 239 | 45 | 3 | 10 | 247 | 63 | 278 | 3.74e-111 | 321 |
| MsG0480020797.01.T01 | AT3G53420 | 68.699 | 246 | 52 | 4 | 4 | 247 | 63 | 285 | 4.63e-109 | 316 |
| MsG0480020797.01.T01 | AT3G53420 | 68.699 | 246 | 52 | 4 | 4 | 247 | 63 | 285 | 4.63e-109 | 316 |
| MsG0480020797.01.T01 | AT2G16850 | 71.245 | 233 | 43 | 3 | 15 | 246 | 66 | 275 | 1.57e-107 | 312 |
| MsG0480020797.01.T01 | AT3G54820 | 67.490 | 243 | 54 | 4 | 6 | 246 | 64 | 283 | 1.67e-107 | 312 |
| MsG0480020797.01.T01 | AT2G39010 | 67.078 | 243 | 55 | 4 | 6 | 246 | 64 | 283 | 6.63e-107 | 310 |
| MsG0480020797.01.T01 | AT4G00430 | 63.203 | 231 | 61 | 3 | 10 | 239 | 78 | 285 | 1.02e-92 | 275 |
| MsG0480020797.01.T01 | AT1G01620 | 63.203 | 231 | 61 | 3 | 10 | 239 | 5 | 212 | 1.81e-92 | 271 |
| MsG0480020797.01.T01 | AT1G01620 | 62.771 | 231 | 62 | 3 | 10 | 239 | 77 | 284 | 6.46e-92 | 272 |
| MsG0480020797.01.T01 | AT2G45960 | 74.457 | 184 | 43 | 2 | 15 | 197 | 82 | 262 | 9.47e-92 | 271 |
| MsG0480020797.01.T01 | AT4G23400 | 61.905 | 231 | 64 | 3 | 10 | 239 | 78 | 285 | 1.13e-91 | 272 |
| MsG0480020797.01.T01 | AT2G45960 | 64.159 | 226 | 57 | 3 | 15 | 239 | 82 | 284 | 5.13e-91 | 270 |
| MsG0480020797.01.T01 | AT3G61430 | 63.717 | 226 | 58 | 3 | 15 | 239 | 82 | 284 | 8.76e-91 | 270 |
| MsG0480020797.01.T01 | AT3G61430 | 63.717 | 226 | 58 | 3 | 15 | 239 | 82 | 284 | 8.76e-91 | 270 |
| MsG0480020797.01.T01 | AT2G45960 | 74.054 | 185 | 43 | 2 | 15 | 198 | 82 | 262 | 2.20e-90 | 269 |
| MsG0480020797.01.T01 | AT2G39010 | 77.099 | 131 | 29 | 1 | 12 | 141 | 71 | 201 | 2.12e-67 | 208 |
| MsG0480020797.01.T01 | AT4G00430 | 72.993 | 137 | 36 | 1 | 10 | 145 | 78 | 214 | 1.71e-63 | 198 |
| MsG0480020797.01.T01 | AT5G47450 | 41.808 | 177 | 82 | 7 | 16 | 184 | 52 | 215 | 1.74e-23 | 95.5 |
| MsG0480020797.01.T01 | AT3G16240 | 38.953 | 172 | 85 | 4 | 16 | 180 | 52 | 210 | 1.31e-21 | 90.5 |
| MsG0480020797.01.T01 | AT4G17340 | 40.120 | 167 | 69 | 6 | 31 | 184 | 67 | 215 | 2.07e-21 | 90.1 |
| MsG0480020797.01.T01 | AT1G17810 | 39.474 | 152 | 73 | 5 | 41 | 187 | 87 | 224 | 1.66e-20 | 88.2 |
| MsG0480020797.01.T01 | AT4G01470 | 38.272 | 162 | 81 | 5 | 31 | 187 | 69 | 216 | 4.12e-20 | 86.7 |
| MsG0480020797.01.T01 | AT1G73190 | 37.968 | 187 | 96 | 6 | 6 | 187 | 53 | 224 | 1.25e-19 | 85.5 |
| MsG0480020797.01.T01 | AT2G36830 | 37.059 | 170 | 89 | 5 | 13 | 177 | 53 | 209 | 2.82e-18 | 81.6 |
| MsG0480020797.01.T01 | AT3G26520 | 37.870 | 169 | 89 | 6 | 13 | 177 | 54 | 210 | 7.42e-18 | 80.5 |
| MsG0480020797.01.T01 | AT3G47440 | 34.868 | 152 | 84 | 5 | 35 | 182 | 75 | 215 | 4.55e-16 | 75.9 |
| MsG0480020797.01.T01 | AT2G25810 | 34.682 | 173 | 89 | 7 | 41 | 203 | 73 | 231 | 2.10e-14 | 70.9 |
| MsG0480020797.01.T01 | AT5G37820 | 31.928 | 166 | 100 | 5 | 22 | 184 | 77 | 232 | 2.72e-13 | 68.2 |
| MsG0480020797.01.T01 | AT5G37820 | 31.928 | 166 | 100 | 5 | 22 | 184 | 113 | 268 | 4.55e-13 | 68.2 |
| MsG0480020797.01.T01 | AT5G37810 | 28.659 | 164 | 108 | 3 | 22 | 184 | 77 | 232 | 4.05e-12 | 65.1 |
Find 97 sgRNAs with CRISPR-Local
Find 147 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGGTATTGCTTGGGCTTT+TGG | 0.189425 | 4:+48494220 | MsG0480020797.01.T01:CDS |
| CTGTGATGGTGTTGGAATTT+TGG | 0.191069 | 4:+48494201 | MsG0480020797.01.T01:CDS |
| ATATGATTATGATAAATTTC+TGG | 0.211508 | 4:+48495964 | MsG0480020797.01.T01:three_prime_UTR |
| TCTACAACGACGGCAAAATT+TGG | 0.232790 | 4:+48495124 | MsG0480020797.01.T01:CDS |
| GAGTCCCTAGCGTTTCTCTT+AGG | 0.240191 | 4:-48494879 | None:intergenic |
| GAAGGATCCAAGAGCTTTAA+TGG | 0.276736 | 4:-48495486 | None:intergenic |
| TTTGTGAACAGTGGATATTC+TGG | 0.288335 | 4:+48495401 | MsG0480020797.01.T01:intron |
| ACTCTTCAACATTATTCTTT+TGG | 0.296879 | 4:-48495581 | None:intergenic |
| GCTGCAACTGCAGTGGGGTT+TGG | 0.298902 | 4:+48495649 | MsG0480020797.01.T01:three_prime_UTR |
| ATCAATCCTGCCGTGACATT+CGG | 0.319082 | 4:+48494627 | MsG0480020797.01.T01:CDS |
| ATTTCATGGTCCCTTGTTAT+TGG | 0.323317 | 4:-48495683 | None:intergenic |
| GCAAATTAAGTGGTCCTATC+TGG | 0.327528 | 4:+48495604 | MsG0480020797.01.T01:three_prime_UTR |
| AAGGAGACTTTAATTAGTTT+AGG | 0.336656 | 4:+48495223 | MsG0480020797.01.T01:intron |
| ATTAACCCGGCAAGAAGTTT+CGG | 0.346372 | 4:+48495090 | MsG0480020797.01.T01:CDS |
| TTAAAGCTCTTGGATCCTTC+AGG | 0.374939 | 4:+48495489 | MsG0480020797.01.T01:CDS |
| ACGGAAGGTGTCCTTGATTA+GGG | 0.379672 | 4:+48494662 | MsG0480020797.01.T01:CDS |
| GACGGAAGGTGTCCTTGATT+AGG | 0.381530 | 4:+48494661 | MsG0480020797.01.T01:CDS |
| TTAATACCGGTGCCGGTAAT+CGG | 0.383368 | 4:-48495072 | None:intergenic |
| ACAAGGATGGAAGATAAATA+TGG | 0.392238 | 4:-48495861 | None:intergenic |
| TCAATCCTGCCGTGACATTC+GGG | 0.394220 | 4:+48494628 | MsG0480020797.01.T01:CDS |
| TACAACAAAGGCACAGCTTT+AGG | 0.394600 | 4:+48494801 | MsG0480020797.01.T01:CDS |
| GCTGATCCGAAACTTCTTGC+CGG | 0.395043 | 4:-48495096 | None:intergenic |
| TCACAGTCAGTACCAGCTTT+AGG | 0.396868 | 4:-48494184 | None:intergenic |
| TACTGCACCGCCGGTATCTC+TGG | 0.401254 | 4:+48494265 | MsG0480020797.01.T01:CDS |
| AGTCCCTAGCGTTTCTCTTA+GGG | 0.401907 | 4:-48494878 | None:intergenic |
| CTACAACGACGGCAAAATTT+GGG | 0.406415 | 4:+48495125 | MsG0480020797.01.T01:CDS |
| AAAGCATACTTTGACAGATA+TGG | 0.407674 | 4:+48494753 | MsG0480020797.01.T01:CDS |
| CACTGCAGTTGCAGCTGAAA+AGG | 0.408278 | 4:-48495641 | None:intergenic |
| GGTTCAGCCATTAAAGCTCT+TGG | 0.411321 | 4:+48495479 | MsG0480020797.01.T01:CDS |
| TAATACCGGTGCCGGTAATC+GGG | 0.412842 | 4:-48495071 | None:intergenic |
| AGCATGGTTCTACAATTTCA+TGG | 0.419918 | 4:-48495697 | None:intergenic |
| AATGATGGAGCTGCTGTGGC+TGG | 0.420690 | 4:+48495431 | MsG0480020797.01.T01:CDS |
| AAAAGACGAAAAGGCCAGAT+AGG | 0.431161 | 4:-48495618 | None:intergenic |
| AGCCACAGCAGCTCCATCAT+TGG | 0.435183 | 4:-48495429 | None:intergenic |
| CGGCAAAATTTGGGATGATC+AGG | 0.438644 | 4:+48495134 | MsG0480020797.01.T01:CDS |
| TTGGAAACCTTTGGCAAGTC+CGG | 0.439461 | 4:-48494730 | None:intergenic |
| TTGGCTACTATCCCGATTAC+CGG | 0.446732 | 4:+48495060 | MsG0480020797.01.T01:CDS |
| GCTTTAGGTGCTGAAATCAT+TGG | 0.457763 | 4:+48494816 | MsG0480020797.01.T01:CDS |
| ACTTCTTGCCGGGTTAATAC+CGG | 0.464164 | 4:-48495085 | None:intergenic |
| ATTCATGATGGCTACAACAA+AGG | 0.473294 | 4:+48494789 | MsG0480020797.01.T01:CDS |
| CTGAACCTCTTAGAATGTAT+TGG | 0.489928 | 4:-48495463 | None:intergenic |
| TACATGGCAGCACAGTGTGC+CGG | 0.490463 | 4:+48494693 | MsG0480020797.01.T01:CDS |
| CTGATCCGAAACTTCTTGCC+GGG | 0.491559 | 4:-48495095 | None:intergenic |
| AGAACCATGCTTGTGTTTCA+AGG | 0.493554 | 4:+48495709 | MsG0480020797.01.T01:three_prime_UTR |
| CTGAAAAGGAAAAGACGAAA+AGG | 0.494274 | 4:-48495627 | None:intergenic |
| ATCCTTGTTTACTGCACCGC+CGG | 0.495855 | 4:+48494256 | MsG0480020797.01.T01:CDS |
| TATTCTGGTTTGTCCAATGA+TGG | 0.499195 | 4:+48495416 | MsG0480020797.01.T01:CDS |
| GCAACTGCAGTGGGGTTTGG+AGG | 0.503181 | 4:+48495652 | MsG0480020797.01.T01:three_prime_UTR |
| AATTAACATCATAGCTTGGT+TGG | 0.506194 | 4:-48495555 | None:intergenic |
| GAGAAATTAACATCATAGCT+TGG | 0.506683 | 4:-48495559 | None:intergenic |
| GTTGAAGAGTGCAAATTAAG+TGG | 0.512272 | 4:+48495594 | MsG0480020797.01.T01:three_prime_UTR |
| GTCCAATGATGGAGCTGCTG+TGG | 0.513788 | 4:+48495427 | MsG0480020797.01.T01:CDS |
| TGCCGGGTTAATACCGGTGC+CGG | 0.514335 | 4:-48495079 | None:intergenic |
| GCCGGCGCAATCTGTGGTAC+CGG | 0.516181 | 4:+48494711 | MsG0480020797.01.T01:CDS |
| CGTGACATTCGGGCTATTCG+TGG | 0.516571 | 4:+48494638 | MsG0480020797.01.T01:CDS |
| AAGAGAAATTTGAAAATGAA+AGG | 0.525243 | 4:-48495826 | None:intergenic |
| GTAAAACACTGCCCTAATCA+AGG | 0.525985 | 4:-48494673 | None:intergenic |
| TACCACCAATACATTCTAAG+AGG | 0.529657 | 4:+48495458 | MsG0480020797.01.T01:CDS |
| GTAGCCATCATGAATAAAGT+TGG | 0.531597 | 4:-48494781 | None:intergenic |
| TTATAGCATACCAGAGATAC+CGG | 0.539251 | 4:-48494275 | None:intergenic |
| TAGGAATTGAATACATACAT+TGG | 0.552401 | 4:-48495775 | None:intergenic |
| ATGAAAACAGCAAATCCAAT+GGG | 0.555341 | 4:-48495030 | None:intergenic |
| TAATTAAGCATTGCTCCTGA+AGG | 0.559103 | 4:-48495504 | None:intergenic |
| AACCTCTTAGAATGTATTGG+TGG | 0.561973 | 4:-48495460 | None:intergenic |
| CGGGCTATTCGTGGGACGGA+AGG | 0.562748 | 4:+48494647 | MsG0480020797.01.T01:CDS |
| GGTGCCAACTTTATTCATGA+TGG | 0.568285 | 4:+48494777 | MsG0480020797.01.T01:CDS |
| ACAGCAAATCCAATGGGAAG+TGG | 0.574194 | 4:-48495024 | None:intergenic |
| TACCGGCGGTGCAGTAAACA+AGG | 0.576199 | 4:-48494258 | None:intergenic |
| CAGTGTGCCGGCGCAATCTG+TGG | 0.577018 | 4:+48494705 | MsG0480020797.01.T01:CDS |
| TTTGCCGTCGTTGTAGATCA+CGG | 0.578627 | 4:-48495118 | None:intergenic |
| CACGAATAGCCCGAATGTCA+CGG | 0.582521 | 4:-48494637 | None:intergenic |
| ATTATATGCTTACAGGAACA+TGG | 0.583004 | 4:-48494902 | None:intergenic |
| TACGAAATTCACAACAAGGA+TGG | 0.583292 | 4:-48495874 | None:intergenic |
| CACCAGTCTGATCCTAAAGC+TGG | 0.583683 | 4:+48494172 | MsG0480020797.01.T01:intron |
| CAATATGGCTAAAGATGTTG+AGG | 0.583700 | 4:+48493984 | None:intergenic |
| GGTACTGACTGTGATGGTGT+TGG | 0.589516 | 4:+48494193 | MsG0480020797.01.T01:CDS |
| TACCGGCACCGGTATTAACC+CGG | 0.590468 | 4:+48495077 | MsG0480020797.01.T01:CDS |
| TGTGGTACCGGACTTGCCAA+AGG | 0.598591 | 4:+48494723 | MsG0480020797.01.T01:CDS |
| CATGAAAACAGCAAATCCAA+TGG | 0.600094 | 4:-48495031 | None:intergenic |
| AATAGCCCGAATGTCACGGC+AGG | 0.600242 | 4:-48494633 | None:intergenic |
| GAACCATGCTTGTGTTTCAA+GGG | 0.600577 | 4:+48495710 | MsG0480020797.01.T01:three_prime_UTR |
| GTGACATTCGGGCTATTCGT+GGG | 0.608893 | 4:+48494639 | MsG0480020797.01.T01:CDS |
| CTGACCCTAAGAGAAACGCT+AGG | 0.623716 | 4:+48494874 | MsG0480020797.01.T01:CDS |
| TCCGGTACCACAGATTGCGC+CGG | 0.626783 | 4:-48494712 | None:intergenic |
| TCAGCCGTGATCTACAACGA+CGG | 0.628333 | 4:+48495114 | MsG0480020797.01.T01:CDS |
| GACAGTGTAGACAAGAACAA+AGG | 0.629321 | 4:-48494841 | None:intergenic |
| GCATACTTTGACAGATATGG+TGG | 0.632537 | 4:+48494756 | MsG0480020797.01.T01:CDS |
| CATTCGGGCTATTCGTGGGA+CGG | 0.637960 | 4:+48494643 | MsG0480020797.01.T01:CDS |
| TTGATACGAAATTCACAACA+AGG | 0.639033 | 4:-48495878 | None:intergenic |
| CAGAAATAAAGTGAACACAT+AGG | 0.641998 | 4:-48495794 | None:intergenic |
| TTATATGCTTACAGGAACAT+GGG | 0.643732 | 4:-48494901 | None:intergenic |
| TGACCCTAAGAGAAACGCTA+GGG | 0.652651 | 4:+48494875 | MsG0480020797.01.T01:CDS |
| ACTATCCCGATTACCGGCAC+CGG | 0.654923 | 4:+48495066 | MsG0480020797.01.T01:CDS |
| TTTCAGCTGCAACTGCAGTG+GGG | 0.659904 | 4:+48495644 | MsG0480020797.01.T01:three_prime_UTR |
| ACACCCTTGAAACACAAGCA+TGG | 0.687112 | 4:-48495713 | None:intergenic |
| AAAGCTGGTACTGACTGTGA+TGG | 0.693407 | 4:+48494187 | MsG0480020797.01.T01:CDS |
| TAGCATACCAGAGATACCGG+CGG | 0.755151 | 4:-48494272 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATGATTATGATAAATTTC+TGG | + | Chr4:48495964-48495983 | MsG0480020797.01.T01:three_prime_UTR | 15.0% |
| !! | TGATAAAATACAAACAAATA+TGG | - | Chr4:48494379-48494398 | None:intergenic | 15.0% |
| !!! | ATTTTTCAGTTTTTTGTTTT+TGG | + | Chr4:48495275-48495294 | MsG0480020797.01.T01:CDS | 15.0% |
| !!! | TTTTATAGATAAATGTTAGT+TGG | + | Chr4:48494551-48494570 | MsG0480020797.01.T01:intron | 15.0% |
| !! | AAATGAAAAAAAGACACAAA+AGG | - | Chr4:48495749-48495768 | None:intergenic | 20.0% |
| !! | AAGAGAAATTTGAAAATGAA+AGG | - | Chr4:48495829-48495848 | None:intergenic | 20.0% |
| !! | AATGAAAAAAAGACACAAAA+GGG | - | Chr4:48495748-48495767 | None:intergenic | 20.0% |
| !! | GTTTATAATTATATGCTTAC+AGG | - | Chr4:48494912-48494931 | None:intergenic | 20.0% |
| !! | TTAAAAAAAAACTCAAGTCA+AGG | - | Chr4:48495945-48495964 | None:intergenic | 20.0% |
| !! | TTAAAGTCTCCTTAAATAAA+CGG | - | Chr4:48495216-48495235 | None:intergenic | 20.0% |
| !!! | ATTTTACAACCGTTTATTTA+AGG | + | Chr4:48495204-48495223 | MsG0480020797.01.T01:intron | 20.0% |
| ! | AGGAAAAAAAACCAATAACA+AGG | + | Chr4:48495672-48495691 | MsG0480020797.01.T01:three_prime_UTR | 25.0% |
| ! | ATTAAGATGAGAAGAGTTTA+TGG | + | Chr4:48494487-48494506 | MsG0480020797.01.T01:intron | 25.0% |
| ! | GGAAAAAAAACCAATAACAA+GGG | + | Chr4:48495673-48495692 | MsG0480020797.01.T01:three_prime_UTR | 25.0% |
| ! | TAGGAATTGAATACATACAT+TGG | - | Chr4:48495778-48495797 | None:intergenic | 25.0% |
| ! | TATATTAACGAGTTTATGTG+TGG | + | Chr4:48494582-48494601 | MsG0480020797.01.T01:intron | 25.0% |
| !! | AAGGAGACTTTAATTAGTTT+AGG | + | Chr4:48495223-48495242 | MsG0480020797.01.T01:intron | 25.0% |
| !! | ACTCTTCAACATTATTCTTT+TGG | - | Chr4:48495584-48495603 | None:intergenic | 25.0% |
| !! | TGTTTTGTGAAATGATGAAA+AGG | + | Chr4:48494993-48495012 | MsG0480020797.01.T01:intron | 25.0% |
| AAAGCATACTTTGACAGATA+TGG | + | Chr4:48494753-48494772 | MsG0480020797.01.T01:CDS | 30.0% | |
| AATTAACATCATAGCTTGGT+TGG | - | Chr4:48495558-48495577 | None:intergenic | 30.0% | |
| ACAAGGATGGAAGATAAATA+TGG | - | Chr4:48495864-48495883 | None:intergenic | 30.0% | |
| ACTGGTGACTATAACAATAA+TGG | - | Chr4:48494159-48494178 | None:intergenic | 30.0% | |
| ATGAAAACAGCAAATCCAAT+GGG | - | Chr4:48495033-48495052 | None:intergenic | 30.0% | |
| ATTATATGCTTACAGGAACA+TGG | - | Chr4:48494905-48494924 | None:intergenic | 30.0% | |
| CAGAAATAAAGTGAACACAT+AGG | - | Chr4:48495797-48495816 | None:intergenic | 30.0% | |
| GAGAAATTAACATCATAGCT+TGG | - | Chr4:48495562-48495581 | None:intergenic | 30.0% | |
| TTATATGCTTACAGGAACAT+GGG | - | Chr4:48494904-48494923 | None:intergenic | 30.0% | |
| TTGATACGAAATTCACAACA+AGG | - | Chr4:48495881-48495900 | None:intergenic | 30.0% | |
| ! | ATCTGTCAAAGTATGCTTTT+TGG | - | Chr4:48494752-48494771 | None:intergenic | 30.0% |
| ! | GTGAAATGATGAAAAGGTTT+TGG | + | Chr4:48494999-48495018 | MsG0480020797.01.T01:intron | 30.0% |
| !!! | GAATTGTTTTTTGTGAACAG+TGG | + | Chr4:48495392-48495411 | MsG0480020797.01.T01:intron | 30.0% |
| AACCTCTTAGAATGTATTGG+TGG | - | Chr4:48495463-48495482 | None:intergenic | 35.0% | |
| AACTCCTCAACATCTATCAA+TGG | - | Chr4:48494062-48494081 | None:intergenic | 35.0% | |
| ATGTTGAGGAGTTAACAAAG+TGG | + | Chr4:48494069-48494088 | MsG0480020797.01.T01:intron | 35.0% | |
| ATTCATGATGGCTACAACAA+AGG | + | Chr4:48494789-48494808 | MsG0480020797.01.T01:CDS | 35.0% | |
| CATGAAAACAGCAAATCCAA+TGG | - | Chr4:48495034-48495053 | None:intergenic | 35.0% | |
| CTGAAAAGGAAAAGACGAAA+AGG | - | Chr4:48495630-48495649 | None:intergenic | 35.0% | |
| CTGAACCTCTTAGAATGTAT+TGG | - | Chr4:48495466-48495485 | None:intergenic | 35.0% | |
| GTAGCCATCATGAATAAAGT+TGG | - | Chr4:48494784-48494803 | None:intergenic | 35.0% | |
| TACACATGCAAGGACTTTAT+AGG | + | Chr4:48494314-48494333 | MsG0480020797.01.T01:intron | 35.0% | |
| TACCACCAATACATTCTAAG+AGG | + | Chr4:48495458-48495477 | MsG0480020797.01.T01:CDS | 35.0% | |
| TACGAAATTCACAACAAGGA+TGG | - | Chr4:48495877-48495896 | None:intergenic | 35.0% | |
| TGGTCAAAACAGTGACATAA+AGG | - | Chr4:48494139-48494158 | None:intergenic | 35.0% | |
| TTATAGCATACCAGAGATAC+CGG | - | Chr4:48494278-48494297 | None:intergenic | 35.0% | |
| TTTGTGAACAGTGGATATTC+TGG | + | Chr4:48495401-48495420 | MsG0480020797.01.T01:intron | 35.0% | |
| ! | AGCATGGTTCTACAATTTCA+TGG | - | Chr4:48495700-48495719 | None:intergenic | 35.0% |
| ! | ATTTCATGGTCCCTTGTTAT+TGG | - | Chr4:48495686-48495705 | None:intergenic | 35.0% |
| ! | GTTGAAGAGTGCAAATTAAG+TGG | + | Chr4:48495594-48495613 | MsG0480020797.01.T01:three_prime_UTR | 35.0% |
| ! | TAATTAAGCATTGCTCCTGA+AGG | - | Chr4:48495507-48495526 | None:intergenic | 35.0% |
| !! | GTATGCTTTTTGGAAACCTT+TGG | - | Chr4:48494742-48494761 | None:intergenic | 35.0% |
| !! | TATTCTGGTTTGTCCAATGA+TGG | + | Chr4:48495416-48495435 | MsG0480020797.01.T01:CDS | 35.0% |
| !! | TGGAATTTTGGGTATTGCTT+GGG | + | Chr4:48494213-48494232 | MsG0480020797.01.T01:CDS | 35.0% |
| !! | TGTGATGGTGTTGGAATTTT+GGG | + | Chr4:48494202-48494221 | MsG0480020797.01.T01:CDS | 35.0% |
| !! | TTGGAATTTTGGGTATTGCT+TGG | + | Chr4:48494212-48494231 | MsG0480020797.01.T01:CDS | 35.0% |
| !!! | CATTGGATTTGCTGTTTTCA+TGG | + | Chr4:48495032-48495051 | MsG0480020797.01.T01:CDS | 35.0% |
| AAAAGACGAAAAGGCCAGAT+AGG | - | Chr4:48495621-48495640 | None:intergenic | 40.0% | |
| ACCTCAACATCTTTAGCCAT+TGG | - | Chr4:48493988-48494007 | None:intergenic | 40.0% | |
| AGAACCATGCTTGTGTTTCA+AGG | + | Chr4:48495709-48495728 | MsG0480020797.01.T01:three_prime_UTR | 40.0% | |
| AGCACCATTGATAGATGTTG+AGG | + | Chr4:48494055-48494074 | MsG0480020797.01.T01:intron | 40.0% | |
| ATGTGTGGAATTGTGATCAC+AGG | + | Chr4:48494597-48494616 | MsG0480020797.01.T01:intron | 40.0% | |
| ATTAACCCGGCAAGAAGTTT+CGG | + | Chr4:48495090-48495109 | MsG0480020797.01.T01:CDS | 40.0% | |
| CTACAACGACGGCAAAATTT+GGG | + | Chr4:48495125-48495144 | MsG0480020797.01.T01:CDS | 40.0% | |
| GAACCATGCTTGTGTTTCAA+GGG | + | Chr4:48495710-48495729 | MsG0480020797.01.T01:three_prime_UTR | 40.0% | |
| GACAGTGTAGACAAGAACAA+AGG | - | Chr4:48494844-48494863 | None:intergenic | 40.0% | |
| GATGTTGAGGTTCAAGAACA+AGG | + | Chr4:48493997-48494016 | MsG0480020797.01.T01:intron | 40.0% | |
| GCAAATTAAGTGGTCCTATC+TGG | + | Chr4:48495604-48495623 | MsG0480020797.01.T01:three_prime_UTR | 40.0% | |
| GCATACTTTGACAGATATGG+TGG | + | Chr4:48494756-48494775 | MsG0480020797.01.T01:CDS | 40.0% | |
| GGTGCCAACTTTATTCATGA+TGG | + | Chr4:48494777-48494796 | MsG0480020797.01.T01:CDS | 40.0% | |
| GTAAAACACTGCCCTAATCA+AGG | - | Chr4:48494676-48494695 | None:intergenic | 40.0% | |
| TCAACATCTATCAATGGTGC+TGG | - | Chr4:48494056-48494075 | None:intergenic | 40.0% | |
| TCTACAACGACGGCAAAATT+TGG | + | Chr4:48495124-48495143 | MsG0480020797.01.T01:CDS | 40.0% | |
| TTAAAGCTCTTGGATCCTTC+AGG | + | Chr4:48495489-48495508 | MsG0480020797.01.T01:CDS | 40.0% | |
| ! | GAAGGATCCAAGAGCTTTAA+TGG | - | Chr4:48495489-48495508 | None:intergenic | 40.0% |
| ! | GATTAGGGCAGTGTTTTACA+TGG | + | Chr4:48494677-48494696 | MsG0480020797.01.T01:CDS | 40.0% |
| ! | TACAACAAAGGCACAGCTTT+AGG | + | Chr4:48494801-48494820 | MsG0480020797.01.T01:CDS | 40.0% |
| !! | CTGTGATGGTGTTGGAATTT+TGG | + | Chr4:48494201-48494220 | MsG0480020797.01.T01:CDS | 40.0% |
| !! | GCTTTAGGTGCTGAAATCAT+TGG | + | Chr4:48494816-48494835 | MsG0480020797.01.T01:CDS | 40.0% |
| !!! | TGCTGTTTTCATGGTTCACT+TGG | + | Chr4:48495041-48495060 | MsG0480020797.01.T01:CDS | 40.0% |
| ACACCCTTGAAACACAAGCA+TGG | - | Chr4:48495716-48495735 | None:intergenic | 45.0% | |
| ACAGCAAATCCAATGGGAAG+TGG | - | Chr4:48495027-48495046 | None:intergenic | 45.0% | |
| ACTTCTTGCCGGGTTAATAC+CGG | - | Chr4:48495088-48495107 | None:intergenic | 45.0% | |
| AGTCCCTAGCGTTTCTCTTA+GGG | - | Chr4:48494881-48494900 | None:intergenic | 45.0% | |
| ATCAATCCTGCCGTGACATT+CGG | + | Chr4:48494627-48494646 | MsG0480020797.01.T01:CDS | 45.0% | |
| ATGGCATGCAACCCTAGTTA+GGG | - | Chr4:48494360-48494379 | None:intergenic | 45.0% | |
| CTCACTCTCTTACACATGCA+AGG | + | Chr4:48494304-48494323 | MsG0480020797.01.T01:intron | 45.0% | |
| GGTTCAGCCATTAAAGCTCT+TGG | + | Chr4:48495479-48495498 | MsG0480020797.01.T01:CDS | 45.0% | |
| TATGGCATGCAACCCTAGTT+AGG | - | Chr4:48494361-48494380 | None:intergenic | 45.0% | |
| TCACAGTCAGTACCAGCTTT+AGG | - | Chr4:48494187-48494206 | None:intergenic | 45.0% | |
| TGACCCTAAGAGAAACGCTA+GGG | + | Chr4:48494875-48494894 | MsG0480020797.01.T01:CDS | 45.0% | |
| TGCATGTGTAAGAGAGTGAG+AGG | - | Chr4:48494304-48494323 | None:intergenic | 45.0% | |
| TGTGGAATTGTGATCACAGG+AGG | + | Chr4:48494600-48494619 | MsG0480020797.01.T01:intron | 45.0% | |
| TTGGAAACCTTTGGCAAGTC+CGG | - | Chr4:48494733-48494752 | None:intergenic | 45.0% | |
| TTGGCTACTATCCCGATTAC+CGG | + | Chr4:48495060-48495079 | MsG0480020797.01.T01:CDS | 45.0% | |
| TTTGCCGTCGTTGTAGATCA+CGG | - | Chr4:48495121-48495140 | None:intergenic | 45.0% | |
| ! | ACATCTATCAATGGTGCTGG+AGG | - | Chr4:48494053-48494072 | None:intergenic | 45.0% |
| ! | ATCTATCAATGGTGCTGGAG+GGG | - | Chr4:48494051-48494070 | None:intergenic | 45.0% |
| ! | CATCTATCAATGGTGCTGGA+GGG | - | Chr4:48494052-48494071 | None:intergenic | 45.0% |
| ! | CGGCAAAATTTGGGATGATC+AGG | + | Chr4:48495134-48495153 | MsG0480020797.01.T01:CDS | 45.0% |
| ! | TTTTCAGCTGCAACTGCAGT+GGG | + | Chr4:48495643-48495662 | MsG0480020797.01.T01:three_prime_UTR | 45.0% |
| !! | AAAGCTGGTACTGACTGTGA+TGG | + | Chr4:48494187-48494206 | MsG0480020797.01.T01:CDS | 45.0% |
| !! | ACGGAAGGTGTCCTTGATTA+GGG | + | Chr4:48494662-48494681 | MsG0480020797.01.T01:CDS | 45.0% |
| !! | TACCAGCTTTAGGATCAGAC+TGG | - | Chr4:48494177-48494196 | None:intergenic | 45.0% |
| !! | TTAATACCGGTGCCGGTAAT+CGG | - | Chr4:48495075-48495094 | None:intergenic | 45.0% |
| !! | TTGGGTATTGCTTGGGCTTT+TGG | + | Chr4:48494220-48494239 | MsG0480020797.01.T01:CDS | 45.0% |
| !! | TAATTAATAATTTAATGATA+TGG | - | Chr4:48495167-48495186 | None:intergenic | 5.0% |
| ACGATGCAGCAACCCTAACT+AGG | + | Chr4:48494345-48494364 | MsG0480020797.01.T01:intron | 50.0% | |
| CACCAGTCTGATCCTAAAGC+TGG | + | Chr4:48494172-48494191 | MsG0480020797.01.T01:intron | 50.0% | |
| CACGAATAGCCCGAATGTCA+CGG | - | Chr4:48494640-48494659 | None:intergenic | 50.0% | |
| CACTGCAGTTGCAGCTGAAA+AGG | - | Chr4:48495644-48495663 | None:intergenic | 50.0% | |
| CGATGCAGCAACCCTAACTA+GGG | + | Chr4:48494346-48494365 | MsG0480020797.01.T01:intron | 50.0% | |
| CTGACCCTAAGAGAAACGCT+AGG | + | Chr4:48494874-48494893 | MsG0480020797.01.T01:CDS | 50.0% | |
| CTGATCCGAAACTTCTTGCC+GGG | - | Chr4:48495098-48495117 | None:intergenic | 50.0% | |
| GAGTCCCTAGCGTTTCTCTT+AGG | - | Chr4:48494882-48494901 | None:intergenic | 50.0% | |
| GCTGATCCGAAACTTCTTGC+CGG | - | Chr4:48495099-48495118 | None:intergenic | 50.0% | |
| GTGACATTCGGGCTATTCGT+GGG | + | Chr4:48494639-48494658 | MsG0480020797.01.T01:CDS | 50.0% | |
| TAGCATACCAGAGATACCGG+CGG | - | Chr4:48494275-48494294 | None:intergenic | 50.0% | |
| TCAATCCTGCCGTGACATTC+GGG | + | Chr4:48494628-48494647 | MsG0480020797.01.T01:CDS | 50.0% | |
| TCAGCCGTGATCTACAACGA+CGG | + | Chr4:48495114-48495133 | MsG0480020797.01.T01:CDS | 50.0% | |
| TTTCAGCTGCAACTGCAGTG+GGG | + | Chr4:48495644-48495663 | MsG0480020797.01.T01:three_prime_UTR | 50.0% | |
| ! | ATCCTTGTTTACTGCACCGC+CGG | + | Chr4:48494256-48494275 | MsG0480020797.01.T01:CDS | 50.0% |
| ! | CTTTTCAGCTGCAACTGCAG+TGG | + | Chr4:48495642-48495661 | MsG0480020797.01.T01:three_prime_UTR | 50.0% |
| ! | GGTATTGCTTGGGCTTTTGG+TGG | + | Chr4:48494223-48494242 | MsG0480020797.01.T01:CDS | 50.0% |
| ! | TCTATCAATGGTGCTGGAGG+GGG | - | Chr4:48494050-48494069 | None:intergenic | 50.0% |
| !! | GACGGAAGGTGTCCTTGATT+AGG | + | Chr4:48494661-48494680 | MsG0480020797.01.T01:CDS | 50.0% |
| !! | GGTACTGACTGTGATGGTGT+TGG | + | Chr4:48494193-48494212 | MsG0480020797.01.T01:CDS | 50.0% |
| !! | GTTTTGGCACCACTTCCCAT+TGG | + | Chr4:48495015-48495034 | MsG0480020797.01.T01:CDS | 50.0% |
| !! | TAATACCGGTGCCGGTAATC+GGG | - | Chr4:48495074-48495093 | None:intergenic | 50.0% |
| AATAGCCCGAATGTCACGGC+AGG | - | Chr4:48494636-48494655 | None:intergenic | 55.0% | |
| ACTATCCCGATTACCGGCAC+CGG | + | Chr4:48495066-48495085 | MsG0480020797.01.T01:CDS | 55.0% | |
| AGCCACAGCAGCTCCATCAT+TGG | - | Chr4:48495432-48495451 | None:intergenic | 55.0% | |
| CATTCGGGCTATTCGTGGGA+CGG | + | Chr4:48494643-48494662 | MsG0480020797.01.T01:CDS | 55.0% | |
| CGTGACATTCGGGCTATTCG+TGG | + | Chr4:48494638-48494657 | MsG0480020797.01.T01:CDS | 55.0% | |
| TACATGGCAGCACAGTGTGC+CGG | + | Chr4:48494693-48494712 | MsG0480020797.01.T01:CDS | 55.0% | |
| TACCGGCGGTGCAGTAAACA+AGG | - | Chr4:48494261-48494280 | None:intergenic | 55.0% | |
| ! | AATGATGGAGCTGCTGTGGC+TGG | + | Chr4:48495431-48495450 | MsG0480020797.01.T01:CDS | 55.0% |
| ! | GTCCAATGATGGAGCTGCTG+TGG | + | Chr4:48495427-48495446 | MsG0480020797.01.T01:CDS | 55.0% |
| ! | TGTGGTACCGGACTTGCCAA+AGG | + | Chr4:48494723-48494742 | MsG0480020797.01.T01:CDS | 55.0% |
| !! | TACCGGCACCGGTATTAACC+CGG | + | Chr4:48495077-48495096 | MsG0480020797.01.T01:CDS | 55.0% |
| GCAACTGCAGTGGGGTTTGG+AGG | + | Chr4:48495652-48495671 | MsG0480020797.01.T01:three_prime_UTR | 60.0% | |
| GCTGCAACTGCAGTGGGGTT+TGG | + | Chr4:48495649-48495668 | MsG0480020797.01.T01:three_prime_UTR | 60.0% | |
| TACTGCACCGCCGGTATCTC+TGG | + | Chr4:48494265-48494284 | MsG0480020797.01.T01:CDS | 60.0% | |
| TCCGGTACCACAGATTGCGC+CGG | - | Chr4:48494715-48494734 | None:intergenic | 60.0% | |
| TGCCGGGTTAATACCGGTGC+CGG | - | Chr4:48495082-48495101 | None:intergenic | 60.0% | |
| CGGGCTATTCGTGGGACGGA+AGG | + | Chr4:48494647-48494666 | MsG0480020797.01.T01:CDS | 65.0% | |
| GCCGGCGCAATCTGTGGTAC+CGG | + | Chr4:48494711-48494730 | MsG0480020797.01.T01:CDS | 65.0% | |
| ! | CAGTGTGCCGGCGCAATCTG+TGG | + | Chr4:48494705-48494724 | MsG0480020797.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 48493988 | 48495990 | 48493988 | ID=MsG0480020797.01;Name=MsG0480020797.01 |
| Chr4 | mRNA | 48493988 | 48495990 | 48493988 | ID=MsG0480020797.01.T01;Parent=MsG0480020797.01;Name=MsG0480020797.01.T01;_AED=0.21;_eAED=0.25;_QI=0|0.4|0.5|1|1|1|6|467|247 |
| Chr4 | exon | 48493988 | 48494005 | 48493988 | ID=MsG0480020797.01.T01:exon:2317;Parent=MsG0480020797.01.T01 |
| Chr4 | exon | 48494178 | 48494286 | 48494178 | ID=MsG0480020797.01.T01:exon:2318;Parent=MsG0480020797.01.T01 |
| Chr4 | exon | 48494619 | 48494911 | 48494619 | ID=MsG0480020797.01.T01:exon:2319;Parent=MsG0480020797.01.T01 |
| Chr4 | exon | 48495015 | 48495155 | 48495015 | ID=MsG0480020797.01.T01:exon:2320;Parent=MsG0480020797.01.T01 |
| Chr4 | exon | 48495226 | 48495296 | 48495226 | ID=MsG0480020797.01.T01:exon:2321;Parent=MsG0480020797.01.T01 |
| Chr4 | exon | 48495412 | 48495990 | 48495412 | ID=MsG0480020797.01.T01:exon:2322;Parent=MsG0480020797.01.T01 |
| Chr4 | CDS | 48493988 | 48494005 | 48493988 | ID=MsG0480020797.01.T01:cds;Parent=MsG0480020797.01.T01 |
| Chr4 | CDS | 48494178 | 48494286 | 48494178 | ID=MsG0480020797.01.T01:cds;Parent=MsG0480020797.01.T01 |
| Chr4 | CDS | 48494619 | 48494911 | 48494619 | ID=MsG0480020797.01.T01:cds;Parent=MsG0480020797.01.T01 |
| Chr4 | CDS | 48495015 | 48495155 | 48495015 | ID=MsG0480020797.01.T01:cds;Parent=MsG0480020797.01.T01 |
| Chr4 | CDS | 48495226 | 48495296 | 48495226 | ID=MsG0480020797.01.T01:cds;Parent=MsG0480020797.01.T01 |
| Chr4 | CDS | 48495412 | 48495523 | 48495412 | ID=MsG0480020797.01.T01:cds;Parent=MsG0480020797.01.T01 |
| Chr4 | three_prime_UTR | 48495524 | 48495990 | 48495524 | ID=MsG0480020797.01.T01:three_prime_utr;Parent=MsG0480020797.01.T01 |
| Gene Sequence |
| Protein sequence |
