AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004374.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004374.01.T01 MTR_1g077980 96.170 470 16 2 1 469 1 469 0.0 925
MsG0180004374.01.T01 MTR_1g077980 96.739 368 12 0 469 836 555 922 0.0 728
MsG0180004374.01.T01 MTR_7g088760 50.327 459 216 8 19 470 14 467 1.88e-140 439
MsG0180004374.01.T01 MTR_7g088760 42.564 390 198 9 446 828 551 921 1.66e-95 320
MsG0180004374.01.T01 MTR_7g088760 50.218 458 216 8 19 469 14 466 4.92e-140 437
MsG0180004374.01.T01 MTR_7g088760 42.564 390 198 9 446 828 534 904 1.50e-95 319
MsG0180004374.01.T01 MTR_7g106570 44.693 358 168 6 120 469 101 436 1.16e-83 286
MsG0180004374.01.T01 MTR_7g106570 41.935 403 184 15 460 835 515 894 7.83e-71 251
MsG0180004374.01.T01 MTR_2g087710 46.000 350 161 3 120 469 99 420 8.01e-82 281
MsG0180004374.01.T01 MTR_2g087710 42.078 385 195 11 457 829 498 866 5.26e-79 274
MsG0180004374.01.T01 MTR_1g014260 33.143 175 91 6 671 822 351 522 4.06e-22 102
MsG0180004374.01.T01 MTR_4g115880 31.737 167 88 5 679 822 415 578 1.11e-20 97.4
MsG0180004374.01.T01 MTR_4g115880 32.667 150 73 3 318 439 195 344 1.80e-13 74.7
MsG0180004374.01.T01 MTR_6g022310 38.312 154 89 5 675 827 280 428 1.13e-19 94.7
MsG0180004374.01.T01 MTR_1g014680 37.908 153 88 4 676 825 339 487 1.56e-19 94.4
MsG0180004374.01.T01 MTR_5g430360 37.908 153 87 6 679 827 136 284 4.18e-18 89.0
MsG0180004374.01.T01 MTR_5g030360 37.908 153 87 6 679 827 304 452 5.97e-18 89.4
MsG0180004374.01.T01 MTR_3g100480 32.973 185 103 6 656 825 711 889 6.14e-18 89.7
MsG0180004374.01.T01 MTR_5g032380 36.242 149 88 4 679 824 582 726 2.05e-17 87.8
MsG0180004374.01.T01 MTR_6g022300 37.333 150 88 5 679 827 224 368 2.69e-17 87.0
MsG0180004374.01.T01 MTR_2g071620 34.228 149 91 4 679 824 625 769 5.10e-17 86.7
MsG0180004374.01.T01 MTR_6g022290 36.667 150 89 5 679 827 186 330 6.34e-17 85.5
MsG0180004374.01.T01 MTR_8g090190 32.203 177 99 6 665 826 194 364 6.63e-17 84.0
MsG0180004374.01.T01 MTR_4g130940 36.424 151 91 5 676 824 248 395 2.26e-16 84.3
MsG0180004374.01.T01 MTR_4g130940 36.424 151 91 5 676 824 248 395 3.06e-16 84.0
MsG0180004374.01.T01 MTR_8g471100 37.162 148 85 5 684 827 366 509 1.35e-15 81.3
MsG0180004374.01.T01 MTR_8g067060 37.162 148 85 5 684 827 357 500 1.37e-15 81.3
MsG0180004374.01.T01 MTR_3g083600 35.338 133 70 4 707 824 938 1069 1.44e-15 82.0
MsG0180004374.01.T01 MTR_5g066000 30.270 185 107 7 656 825 669 846 4.63e-15 80.1
MsG0180004374.01.T01 MTR_3g087140 29.050 179 106 5 665 828 194 366 5.33e-15 78.2
MsG0180004374.01.T01 MTR_3g100480 29.577 213 103 7 656 825 711 919 1.36e-14 79.0
MsG0180004374.01.T01 MTR_0279s0020 37.209 129 75 4 700 827 163 286 2.67e-14 75.1
MsG0180004374.01.T01 MTR_0279s0020 37.302 126 73 4 700 824 172 292 1.16e-13 73.6
MsG0180004374.01.T01 MTR_2g070390 32.886 149 94 5 679 825 185 329 1.61e-11 68.6
MsG0180004374.01.T01 MTR_3g108660 33.846 130 82 3 679 805 255 383 4.36e-11 67.4
MsG0180004374.01.T01 MTR_3g108660 33.846 130 82 3 679 805 255 383 5.71e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004374.01.T01 AT4G10590 61.263 475 155 9 1 469 1 452 0.0 557
MsG0180004374.01.T01 AT4G10590 54.756 431 169 7 411 832 488 901 3.66e-141 441
MsG0180004374.01.T01 AT4G10590 61.263 475 155 9 1 469 1 452 0.0 557
MsG0180004374.01.T01 AT4G10590 54.756 431 169 7 411 832 488 901 3.66e-141 441
MsG0180004374.01.T01 AT4G10590 61.263 475 155 9 1 469 1 452 0.0 557
MsG0180004374.01.T01 AT4G10590 54.756 431 169 7 411 832 488 901 3.66e-141 441
MsG0180004374.01.T01 AT4G10590 61.263 475 155 9 1 469 1 452 0.0 557
MsG0180004374.01.T01 AT4G10590 54.756 431 169 7 411 832 488 901 3.66e-141 441
MsG0180004374.01.T01 AT4G10570 61.263 475 156 8 1 469 1 453 0.0 553
MsG0180004374.01.T01 AT4G10570 58.505 388 139 5 457 834 529 904 2.05e-144 449
MsG0180004374.01.T01 AT1G32850 57.930 454 166 8 20 469 18 450 7.22e-168 509
MsG0180004374.01.T01 AT1G32850 57.909 373 135 7 460 828 529 883 7.50e-127 402
MsG0180004374.01.T01 AT2G40930 50.431 464 205 9 19 469 15 466 3.86e-139 436
MsG0180004374.01.T01 AT2G40930 45.799 369 182 8 469 824 552 915 8.08e-91 307
MsG0180004374.01.T01 AT2G40930 50.431 464 205 9 19 469 15 466 3.86e-139 436
MsG0180004374.01.T01 AT2G40930 45.799 369 182 8 469 824 552 915 8.08e-91 307
MsG0180004374.01.T01 AT5G22030 46.459 353 162 7 120 469 100 428 5.31e-90 303
MsG0180004374.01.T01 AT5G22030 45.407 381 181 12 457 825 504 869 2.57e-88 299
MsG0180004374.01.T01 AT5G22030 45.407 381 181 12 457 825 546 911 4.19e-88 299
MsG0180004374.01.T01 AT5G22030 47.546 326 132 9 159 469 169 470 1.55e-81 281
MsG0180004374.01.T01 AT4G31670 37.908 153 88 4 676 825 326 474 3.63e-20 96.3
MsG0180004374.01.T01 AT2G24640 37.255 153 89 4 676 825 162 310 3.96e-20 95.1
MsG0180004374.01.T01 AT5G46740 37.500 152 88 5 679 827 115 262 5.50e-20 95.1
MsG0180004374.01.T01 AT2G24640 37.255 153 89 4 676 825 332 480 1.11e-19 94.7
MsG0180004374.01.T01 AT5G46740 37.500 152 88 5 679 827 324 471 1.15e-19 94.7
MsG0180004374.01.T01 AT1G17110 34.899 149 90 4 679 824 603 747 2.28e-17 87.8
MsG0180004374.01.T01 AT1G17110 34.899 149 90 4 679 824 599 743 2.47e-17 87.4
MsG0180004374.01.T01 AT1G17110 34.899 149 90 4 679 824 599 743 2.47e-17 87.4
MsG0180004374.01.T01 AT5G10790 29.412 170 91 5 679 822 233 399 2.87e-17 85.9
MsG0180004374.01.T01 AT5G10790 34.211 114 73 2 318 430 46 158 2.61e-11 67.0
MsG0180004374.01.T01 AT4G17895 36.184 152 90 5 679 827 331 478 3.65e-17 86.7
MsG0180004374.01.T01 AT5G10790 29.412 170 91 5 679 822 362 528 5.45e-17 85.9
MsG0180004374.01.T01 AT5G10790 34.211 114 73 2 318 430 175 287 3.20e-11 67.4
MsG0180004374.01.T01 AT4G24560 34.483 145 87 4 684 825 708 847 1.76e-16 84.7
MsG0180004374.01.T01 AT5G65450 34.667 150 90 5 679 824 506 651 1.74e-15 81.3
MsG0180004374.01.T01 AT5G65450 34.667 150 90 5 679 824 487 632 1.87e-15 81.3
MsG0180004374.01.T01 AT4G39910 33.129 163 89 6 679 826 211 368 2.65e-15 79.0
MsG0180004374.01.T01 AT2G22310 32.934 167 86 7 679 827 174 332 5.54e-15 77.8
MsG0180004374.01.T01 AT2G22310 32.934 167 86 7 679 827 169 327 6.24e-15 77.4
MsG0180004374.01.T01 AT1G04860 39.370 127 59 3 319 439 230 344 6.55e-15 79.7
MsG0180004374.01.T01 AT1G04860 38.931 131 64 6 708 825 830 957 8.08e-14 76.3
MsG0180004374.01.T01 AT2G22310 32.934 167 86 7 679 827 206 364 9.02e-15 77.4
MsG0180004374.01.T01 AT5G57990 32.450 151 92 5 675 824 268 409 1.28e-14 78.6
MsG0180004374.01.T01 AT2G32780 37.037 135 65 5 708 825 952 1083 2.21e-14 78.2
MsG0180004374.01.T01 AT2G32780 37.984 129 64 4 311 432 189 308 1.82e-12 72.0
MsG0180004374.01.T01 AT4G30890 37.288 118 70 4 710 825 436 551 1.34e-12 71.6
MsG0180004374.01.T01 AT4G30890 37.288 118 70 4 710 825 436 551 1.34e-12 71.6
MsG0180004374.01.T01 AT4G30890 37.288 118 70 4 710 825 436 551 1.34e-12 71.6
MsG0180004374.01.T01 AT3G49600 32.143 140 86 4 679 810 253 391 2.28e-11 68.2
MsG0180004374.01.T01 AT3G49600 32.143 140 86 4 679 810 253 391 2.28e-11 68.2
MsG0180004374.01.T01 AT3G49600 32.143 140 86 4 679 810 253 391 2.28e-11 68.2
MsG0180004374.01.T01 AT3G14400 31.788 151 97 5 676 824 188 334 2.77e-11 67.8

Find 240 sgRNAs with CRISPR-Local

Find 728 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAATCTGTCTTCAAATTT+TGG 0.121799 1:-77174531 None:intergenic
AACTCCCTTGGTTACTTATT+TGG 0.167537 1:+77173258 MsG0180004374.01.T01:CDS
AATTATATTAGGCTTCTATT+TGG 0.193463 1:+77169285 MsG0180004374.01.T01:intron
GTGGAAATTGCCAGAGATTT+TGG 0.202696 1:+77173922 MsG0180004374.01.T01:CDS
CATTACGTTGTTAGGATTCT+AGG 0.223153 1:+77174820 MsG0180004374.01.T01:three_prime_UTR
ATTTATTATTTGTTAAATAA+TGG 0.255166 1:+77174902 MsG0180004374.01.T01:three_prime_UTR
GAGCTAGTGTGCAAAGTTAA+AGG 0.260338 1:+77169158 MsG0180004374.01.T01:CDS
GTGAATTAGCACTTGCATTT+GGG 0.290290 1:+77170217 MsG0180004374.01.T01:CDS
TTGAGGAAACTTTGGTCCTC+TGG 0.299288 1:+77170246 MsG0180004374.01.T01:CDS
CCGTAATGTACTTTACTAAT+AGG 0.299800 1:+77174766 MsG0180004374.01.T01:three_prime_UTR
AATTGTAAAATTAAGCAAAA+AGG 0.300141 1:+77168384 MsG0180004374.01.T01:CDS
CTTCCTGAAGTTCACAAAAC+TGG 0.302951 1:+77173652 MsG0180004374.01.T01:CDS
TCATCTTCCATTACGTTGTT+AGG 0.307039 1:+77174812 MsG0180004374.01.T01:three_prime_UTR
CTCTAGAAAACCTGTTCATT+TGG 0.309192 1:+77174590 MsG0180004374.01.T01:three_prime_UTR
GCTGATCGTTCCTCTCATTC+TGG 0.315839 1:+77169726 MsG0180004374.01.T01:CDS
GGAATCATTGACTTCAATAA+AGG 0.321302 1:+77172353 MsG0180004374.01.T01:CDS
TTTCCACAAGTCCAGTTTCT+TGG 0.325981 1:-77173906 None:intergenic
ATGCAGTCCATCCAATAAAA+AGG 0.328639 1:-77171546 None:intergenic
GGTGAATTAGCACTTGCATT+TGG 0.331811 1:+77170216 MsG0180004374.01.T01:CDS
ACCTGTTCATTTGGGAGTAT+TGG 0.339593 1:+77174599 MsG0180004374.01.T01:three_prime_UTR
TTAATTTCAGCTTCAGAAAC+AGG 0.340496 1:-77174338 None:intergenic
AACGATGACGATTGCTGAAT+CGG 0.342025 1:+77164701 MsG0180004374.01.T01:exon
TTGGAAGAAGACCCTCAATA+TGG 0.349829 1:+77173277 MsG0180004374.01.T01:CDS
AGCAACCATTACGGTGGTTT+AGG 0.350370 1:+77174091 MsG0180004374.01.T01:CDS
GAACTTCCCCATTCACAATC+TGG 0.353781 1:+77174006 MsG0180004374.01.T01:CDS
AAAACCCAGTGCACATATAA+AGG 0.354307 1:+77173570 MsG0180004374.01.T01:CDS
AGAGATGATGGATGATAAAC+AGG 0.354420 1:+77174868 MsG0180004374.01.T01:three_prime_UTR
TGTTCTCTGGTGCAAAGTGC+CGG 0.355262 1:-77173454 None:intergenic
GAATAGCGCTCTACAATGTT+TGG 0.363015 1:+77169986 MsG0180004374.01.T01:CDS
ATTATATTAGGCTTCTATTT+GGG 0.367380 1:+77169286 MsG0180004374.01.T01:intron
ATCAACTTCCTTGGCAATGC+TGG 0.378205 1:-77168277 None:intergenic
GTCTGTGTTCCTTGCATTGA+GGG 0.381184 1:-77173877 None:intergenic
GCCAAGGAAGTTGATTTCTC+AGG 0.383623 1:+77168285 MsG0180004374.01.T01:CDS
GATGGAAGAAGCGACGTCTT+AGG 0.385620 1:+77174412 MsG0180004374.01.T01:CDS
ACAAAGAAATAGCTTCTTGC+CGG 0.386336 1:-77173693 None:intergenic
CAGACAAGCTACCAAGAAAC+TGG 0.387149 1:+77173895 MsG0180004374.01.T01:CDS
TCTAGAAAACCTGTTCATTT+GGG 0.388446 1:+77174591 MsG0180004374.01.T01:three_prime_UTR
GGTGGAGAGAGGAAGATCTT+TGG 0.388726 1:+77173235 MsG0180004374.01.T01:CDS
AGATCATCTGTATCAATTGC+AGG 0.391184 1:+77169798 MsG0180004374.01.T01:CDS
CAGGTTGTTTGTTTGATGCC+TGG 0.398535 1:+77174441 MsG0180004374.01.T01:three_prime_UTR
TCATTCTGGTGTGCATTCAA+TGG 0.399599 1:+77169740 MsG0180004374.01.T01:CDS
TATCACAGATGCCTTGTCAA+TGG 0.404625 1:-77173548 None:intergenic
TGTTGCACCACGTGCGTTCA+AGG 0.406091 1:+77170278 MsG0180004374.01.T01:CDS
TTCTCTTCCTCCGGTGAAAT+CGG 0.411393 1:-77164756 None:intergenic
AGAAATATTGCATCGACATC+TGG 0.412333 1:+77172431 MsG0180004374.01.T01:CDS
TCTCATGAAGGGAAGGAAAC+TGG 0.414310 1:+77173367 MsG0180004374.01.T01:CDS
ATTATATCAGAATTATCAAT+TGG 0.417193 1:-77167812 None:intergenic
GAGAATGACAATTAAGAGAA+AGG 0.418500 1:-77174933 None:intergenic
CACTGAATTGTGGAGCAAAT+CGG 0.419702 1:-77170311 None:intergenic
AATGGTTGCTGATTGCATAA+AGG 0.420321 1:-77174078 None:intergenic
TCAGTCACCTTTAGATTAAG+TGG 0.422100 1:-77168340 None:intergenic
TTGCAGTCTAGAACTTGGTT+AGG 0.423591 1:+77174667 MsG0180004374.01.T01:three_prime_UTR
ATCACAGATGCCTTGTCAAT+GGG 0.425512 1:-77173547 None:intergenic
GATGATCTTGGAGGTTCTAA+TGG 0.426414 1:-77169783 None:intergenic
GAGTCCTTCATTTCAATGTA+AGG 0.429050 1:-77171596 None:intergenic
TTTAGCAGGACTGCAGAACT+TGG 0.431003 1:+77169947 MsG0180004374.01.T01:CDS
GGATGTCCCCTCTTGTTCTC+TGG 0.432883 1:-77173467 None:intergenic
GACATTGGAGGATGCAAACT+TGG 0.434048 1:+77169355 MsG0180004374.01.T01:CDS
TCGGAGCTTAATTTGAAAGA+TGG 0.434560 1:+77164807 MsG0180004374.01.T01:CDS
CCTATTAGTAAAGTACATTA+CGG 0.435889 1:-77174766 None:intergenic
AGAATGACAATTAAGAGAAA+GGG 0.436107 1:-77174932 None:intergenic
ACCAATACTCCCAAATGAAC+AGG 0.436510 1:-77174600 None:intergenic
GTTCTCTGGTGCAAAGTGCC+GGG 0.438834 1:-77173453 None:intergenic
TATACTTTATTATTTCCAAT+AGG 0.439148 1:+77164835 MsG0180004374.01.T01:CDS
AATGGTCACTCAAGTGGGTC+TGG 0.439704 1:+77169837 MsG0180004374.01.T01:CDS
AAGACGTCGCTTCTTCCATC+TGG 0.440402 1:-77174409 None:intergenic
GGGACTTGTTGAGGAAACTT+TGG 0.440723 1:+77170238 MsG0180004374.01.T01:CDS
ATCAACATGGAGAATCCTTT+AGG 0.444926 1:+77170059 MsG0180004374.01.T01:CDS
GCAGGCCATCAGAAGATTGC+TGG 0.446316 1:-77167748 None:intergenic
GAAGATTGCTGGTCAGTAGA+AGG 0.449332 1:-77167737 None:intergenic
CAATCTTACCACATGTCATC+TGG 0.451523 1:-77173757 None:intergenic
ACGATCCGTTTCTCTTCCTC+CGG 0.451906 1:-77164765 None:intergenic
AGTTTGCATCCTCCAATGTC+TGG 0.452632 1:-77169352 None:intergenic
ACTGAATTGTGGAGCAAATC+GGG 0.454165 1:-77170310 None:intergenic
AAGGAAACTGGTTTCATCTC+AGG 0.457552 1:+77173379 MsG0180004374.01.T01:CDS
ATCAGAATTATCAATTGGAC+CGG 0.457774 1:-77167807 None:intergenic
GCAATTGATACAGATGATCT+TGG 0.458422 1:-77169795 None:intergenic
ACCTCAATGCTGTACTGCTT+CGG 0.459105 1:-77168313 None:intergenic
ATCTGGTCCTAGAGGTTCTT+CGG 0.459925 1:-77173740 None:intergenic
GGTCAAATCCAGATTGTGAA+TGG 0.461365 1:-77174014 None:intergenic
CATTCTGGTGTGCATTCAAT+GGG 0.461609 1:+77169741 MsG0180004374.01.T01:CDS
ATATAAAGGTCTTTGTTGAC+TGG 0.462749 1:+77173584 MsG0180004374.01.T01:CDS
GGTGAAAGAGGTGGTTTAGC+AGG 0.462978 1:+77169933 MsG0180004374.01.T01:CDS
TCAATGTTGGCTCCATATTG+AGG 0.465522 1:-77173289 None:intergenic
CAAGTATGGGAAAGGCTGTT+GGG 0.466815 1:+77167920 MsG0180004374.01.T01:CDS
GTCAAATCCAGATTGTGAAT+GGG 0.468661 1:-77174013 None:intergenic
CTTCGTTAGTTAAAACAAGT+TGG 0.468962 1:-77173507 None:intergenic
GATAAATATGACGTCTATAG+TGG 0.470173 1:+77169912 MsG0180004374.01.T01:CDS
AATTCTGATATAATTTCAAA+TGG 0.473308 1:+77167821 MsG0180004374.01.T01:CDS
TATGCAATCAGCAACCATTA+CGG 0.474161 1:+77174082 MsG0180004374.01.T01:CDS
TAAAGGTTATACACATAGGA+TGG 0.475468 1:-77174061 None:intergenic
AAAGACCTTTATATGTGCAC+TGG 0.477243 1:-77173575 None:intergenic
GCAAAGTAAAACGGCTATCC+AGG 0.479413 1:-77174497 None:intergenic
CAATGTTGGCTCCATATTGA+GGG 0.480052 1:-77173288 None:intergenic
CGGAGCTTAATTTGAAAGAT+GGG 0.480500 1:+77164808 MsG0180004374.01.T01:CDS
GAAGATCTTTGGAACTCCCT+TGG 0.482950 1:+77173246 MsG0180004374.01.T01:CDS
ATAAAATGTGGAAGAGATGA+TGG 0.483632 1:+77174856 MsG0180004374.01.T01:three_prime_UTR
ATTACGTTGTTAGGATTCTA+GGG 0.485484 1:+77174821 MsG0180004374.01.T01:three_prime_UTR
CCCTGAGAAATCAACTTCCT+TGG 0.487604 1:-77168286 None:intergenic
TATATGATGCAAGCTATTTG+AGG 0.490281 1:+77173626 MsG0180004374.01.T01:CDS
TGAGGAAACTTTGGTCCTCT+GGG 0.491053 1:+77170247 MsG0180004374.01.T01:CDS
GAAGGAGTTAATTAAGCAAT+CGG 0.491093 1:+77164788 MsG0180004374.01.T01:CDS
TGTCTGTGTTCCTTGCATTG+AGG 0.491807 1:-77173878 None:intergenic
TGACGTGACTGTCATCGAAA+TGG 0.493653 1:-77174313 None:intergenic
TTGCATTTGGGGACTTGTTG+AGG 0.494177 1:+77170229 MsG0180004374.01.T01:CDS
CATTACGGTGGTTTAGGTGG+TGG 0.494345 1:+77174097 MsG0180004374.01.T01:CDS
CCAAGGAAGTTGATTTCTCA+GGG 0.495656 1:+77168286 MsG0180004374.01.T01:CDS
GACGTCATATTTATCATCCA+TGG 0.496415 1:-77169904 None:intergenic
AACTAACCCTAGATAGATTG+AGG 0.497479 1:-77164476 None:intergenic
TACGGTGCATAAAATTGTAA+TGG 0.497815 1:-77174748 None:intergenic
ACAAGTATGGGAAAGGCTGT+TGG 0.500405 1:+77167919 MsG0180004374.01.T01:CDS
TTAGCAGGACTGCAGAACTT+GGG 0.500451 1:+77169948 MsG0180004374.01.T01:CDS
CAACTCATCCCATTATCAAT+CGG 0.501111 1:-77164729 None:intergenic
AAAGCCTTACATTGAAATGA+AGG 0.501423 1:+77171592 MsG0180004374.01.T01:CDS
CTCGGATGGTAGGCCGGATG+AGG 0.505210 1:+77171616 MsG0180004374.01.T01:CDS
ATATGATGCAAGCTATTTGA+GGG 0.506090 1:+77173627 MsG0180004374.01.T01:CDS
TTTAGTTCCTCAACAAGTAT+GGG 0.508258 1:+77167907 MsG0180004374.01.T01:CDS
CTAGAATCCTAACAACGTAA+TGG 0.510053 1:-77174819 None:intergenic
TCATATGCTGAAAGGCAATC+CGG 0.511442 1:+77174465 MsG0180004374.01.T01:three_prime_UTR
ATTGAAGTCAATGATTCCAA+TGG 0.513982 1:-77172348 None:intergenic
ACGTGCGTTCAAGGGAAAGC+TGG 0.515230 1:+77170287 MsG0180004374.01.T01:CDS
CAAAGAAATAGCTTCTTGCC+GGG 0.515685 1:-77173692 None:intergenic
GTCCATACACGCATTCCTAA+AGG 0.518820 1:-77170074 None:intergenic
TCAAGTTGGCAGAGGTATGT+TGG 0.525434 1:+77167698 MsG0180004374.01.T01:CDS
AATGGGAAATGAATTAGCAT+TGG 0.527118 1:+77169758 MsG0180004374.01.T01:CDS
AGTTGGAAGCGACGTCCAGA+TGG 0.527287 1:+77174394 MsG0180004374.01.T01:CDS
AATGAACAGTATCGGCATGC+AGG 0.529143 1:-77167766 None:intergenic
AACTAAGTCTCATGAAGGGA+AGG 0.531234 1:+77173360 MsG0180004374.01.T01:CDS
TTTAGATATTCATCGACCAT+TGG 0.531240 1:+77167865 MsG0180004374.01.T01:CDS
AGCCTTTCCCATACTTGTTG+AGG 0.532585 1:-77167914 None:intergenic
ATTGATTGTTGATGAATGCC+AGG 0.532873 1:+77171685 MsG0180004374.01.T01:CDS
GAAGGACTCGGATGGTAGGC+CGG 0.535738 1:+77171610 MsG0180004374.01.T01:CDS
GACATATGTACATAGAATGT+TGG 0.539698 1:+77173312 MsG0180004374.01.T01:CDS
GGTGTACCCACTTAATCTAA+AGG 0.542422 1:+77168333 MsG0180004374.01.T01:CDS
AACTAACTTGAGAATCATGC+TGG 0.546603 1:-77170341 None:intergenic
AGCTTTCCCTTGAACGCACG+TGG 0.549334 1:-77170285 None:intergenic
AAGTATGTGAAAAGTAAAGA+TGG 0.549335 1:+77174037 MsG0180004374.01.T01:CDS
GACGTCTATAGTGGTGAAAG+AGG 0.550637 1:+77169921 MsG0180004374.01.T01:CDS
ACTAACCCTAGATAGATTGA+GGG 0.551547 1:-77164475 None:intergenic
TAGAGCGCTATTCATAAAGC+AGG 0.553621 1:-77169976 None:intergenic
TCTTCAACTAAGTCTCATGA+AGG 0.553689 1:+77173355 MsG0180004374.01.T01:CDS
GCTATCCAGGACTTAAGCTC+CGG 0.554815 1:-77174484 None:intergenic
TTGTCTAATGGTCACTCAAG+TGG 0.555942 1:+77169831 MsG0180004374.01.T01:CDS
TCATTTGCGACTTCCTCATC+CGG 0.556059 1:-77171629 None:intergenic
TGTTCACTGAACAGTGGGAA+GGG 0.557069 1:+77173214 MsG0180004374.01.T01:intron
TGAATTAGCACTTGCATTTG+GGG 0.557302 1:+77170218 MsG0180004374.01.T01:CDS
CACCACCTAAACCACCGTAA+TGG 0.561137 1:-77174096 None:intergenic
TCGTTATCTAGATAATCCAT+TGG 0.561503 1:+77172332 MsG0180004374.01.T01:CDS
ATTACGGTGGTTTAGGTGGT+GGG 0.561699 1:+77174098 MsG0180004374.01.T01:CDS
TATCTTCAAATGAACAGTAT+CGG 0.562949 1:-77167774 None:intergenic
CAAATGGTAGTAATTGTGAC+GGG 0.563591 1:+77167837 MsG0180004374.01.T01:CDS
GCGACGTCTTAGGTTCATGC+AGG 0.563950 1:+77174422 MsG0180004374.01.T01:exon
TGCCTTTCAGCATATGAACC+AGG 0.565410 1:-77174459 None:intergenic
ATCGACTCAAGAGTGGAGCC+AGG 0.567147 1:+77172397 MsG0180004374.01.T01:CDS
GATCATCTGTATCAATTGCA+GGG 0.567157 1:+77169799 MsG0180004374.01.T01:CDS
GCAATCCGGAGCTTAAGTCC+TGG 0.567393 1:+77174479 MsG0180004374.01.T01:three_prime_UTR
GAACAAAGAGTCATTGCTGA+CGG 0.567578 1:+77169322 MsG0180004374.01.T01:CDS
TGTCTAATGGTCACTCAAGT+GGG 0.570423 1:+77169832 MsG0180004374.01.T01:CDS
TTGGAAAGATGAATCTCCAC+AGG 0.573195 1:-77173488 None:intergenic
AAAGGATGAAGAACATATTG+TGG 0.573464 1:+77172371 MsG0180004374.01.T01:CDS
GAGTTGTGTGCCGATTTCAC+CGG 0.573770 1:+77164746 MsG0180004374.01.T01:CDS
AAGACCTTTATATGTGCACT+GGG 0.574315 1:-77173574 None:intergenic
GAACAAGAGGGGACATCCTG+TGG 0.574752 1:+77173472 MsG0180004374.01.T01:CDS
TAGCAGGACTGCAGAACTTG+GGG 0.576248 1:+77169949 MsG0180004374.01.T01:CDS
TATGGGAAAGGCTGTTGGGA+TGG 0.576501 1:+77167924 MsG0180004374.01.T01:CDS
AGGTATGTTGGCCATTGTGA+TGG 0.577486 1:+77167710 MsG0180004374.01.T01:CDS
AGGAAGTCGCAAATGAGTGT+TGG 0.577729 1:+77171636 MsG0180004374.01.T01:CDS
GTTGCACCACGTGCGTTCAA+GGG 0.578428 1:+77170279 MsG0180004374.01.T01:CDS
TCAAATGGTAGTAATTGTGA+CGG 0.579113 1:+77167836 MsG0180004374.01.T01:CDS
ATTGATACAGATGATCTTGG+AGG 0.579531 1:-77169792 None:intergenic
TAGTCTTTATCCTCTTCCAA+TGG 0.580945 1:-77167881 None:intergenic
TATTCATCGACCATTGGAAG+AGG 0.581116 1:+77167871 MsG0180004374.01.T01:CDS
GGAGGATGCAAACTTGGCAA+TGG 0.582891 1:+77169361 MsG0180004374.01.T01:CDS
CGATTTGCTCCACAATTCAG+TGG 0.583237 1:+77170312 MsG0180004374.01.T01:CDS
ATGTACATATGTCTCAATGT+TGG 0.584427 1:-77173302 None:intergenic
AACCATTACGGTGGTTTAGG+TGG 0.584463 1:+77174094 MsG0180004374.01.T01:CDS
TTTCACCGGAGGAAGAGAAA+CGG 0.585574 1:+77164760 MsG0180004374.01.T01:CDS
TTCCTCAACAAGTATGGGAA+AGG 0.585591 1:+77167912 MsG0180004374.01.T01:CDS
TTACATTGAAATGAAGGACT+CGG 0.585855 1:+77171598 MsG0180004374.01.T01:CDS
TAGCTGTGAGCCCATTGACA+AGG 0.586420 1:+77173537 MsG0180004374.01.T01:CDS
GACGGCTTCAGACCAGACAT+TGG 0.593889 1:+77169340 MsG0180004374.01.T01:CDS
ATTCAGCAAGTGGTGGAGTG+TGG 0.594255 1:-77170010 None:intergenic
TAGGTACTGCCCTCAATGCA+AGG 0.598022 1:+77173868 MsG0180004374.01.T01:intron
GGCTCCACTCTTGAGTCGAT+AGG 0.599098 1:-77172394 None:intergenic
TTGTGTGCCGATTTCACCGG+AGG 0.599322 1:+77164749 MsG0180004374.01.T01:CDS
AAATGAAGGACTCGGATGGT+AGG 0.599838 1:+77171606 MsG0180004374.01.T01:CDS
TTCTTCCAAATAAGTAACCA+AGG 0.600475 1:-77173263 None:intergenic
ACTGACCAGCAATCTTCTGA+TGG 0.604191 1:+77167743 MsG0180004374.01.T01:CDS
CTACCAAGAAACTGGACTTG+TGG 0.605316 1:+77173903 MsG0180004374.01.T01:CDS
ACTTTGCACCAGAGAACAAG+AGG 0.606165 1:+77173459 MsG0180004374.01.T01:CDS
GCATTACACTGCATATGCTA+AGG 0.606988 1:+77174120 MsG0180004374.01.T01:CDS
AGTTGATTGATGATAATAAG+TGG 0.607365 1:+77174288 MsG0180004374.01.T01:intron
CAGTCACCTTTAGATTAAGT+GGG 0.609081 1:-77168339 None:intergenic
TGAATGCACACCAGAATGAG+AGG 0.609087 1:-77169736 None:intergenic
AAAGGTTATACACATAGGAT+GGG 0.610075 1:-77174060 None:intergenic
TTACAATTGTCTAGGTACAA+AGG 0.610376 1:+77168250 MsG0180004374.01.T01:intron
ATGTTCACTGAACAGTGGGA+AGG 0.611843 1:+77173213 MsG0180004374.01.T01:intron
ACGTAACGATCTAACTTCAA+CGG 0.618315 1:-77164414 None:intergenic
TGCATAAAGGTTATACACAT+AGG 0.622320 1:-77174065 None:intergenic
TCAAATCCAGATTGTGAATG+GGG 0.623330 1:-77174012 None:intergenic
GTGGCCTATCGACTCAAGAG+TGG 0.623354 1:+77172390 MsG0180004374.01.T01:CDS
AAGGTGGACCAGCATTGCCA+AGG 0.624449 1:+77168269 MsG0180004374.01.T01:CDS
GGCTTCAGACCAGACATTGG+AGG 0.625110 1:+77169343 MsG0180004374.01.T01:CDS
ACAGTGGGAAGGGTGGAGAG+AGG 0.626561 1:+77173224 MsG0180004374.01.T01:intron
CACATGTCATCTGGTCCTAG+AGG 0.629509 1:-77173748 None:intergenic
GGAAGAGAAACGGATCGTGA+AGG 0.630973 1:+77164770 MsG0180004374.01.T01:CDS
CTTCAACTAAGTCTCATGAA+GGG 0.631995 1:+77173356 MsG0180004374.01.T01:CDS
AAGTTCATCACTGACTACCA+TGG 0.632917 1:+77169887 MsG0180004374.01.T01:CDS
TCACAGTGAACTGAGGAACC+CGG 0.634317 1:+77173435 MsG0180004374.01.T01:CDS
ATCATCTGTATCAATTGCAG+GGG 0.637469 1:+77169800 MsG0180004374.01.T01:CDS
ACCGAAGCAGTACAGCATTG+AGG 0.637486 1:+77168312 MsG0180004374.01.T01:CDS
TGGTTATAACCACTGAATTG+TGG 0.641543 1:-77170321 None:intergenic
GAAACTGGTTTCATCTCAGG+TGG 0.641699 1:+77173382 MsG0180004374.01.T01:CDS
TCACTGAACAGTGGGAAGGG+TGG 0.648017 1:+77173217 MsG0180004374.01.T01:intron
TCTTCCAAATAAGTAACCAA+GGG 0.649627 1:-77173262 None:intergenic
CTAACCCTAGATAGATTGAG+GGG 0.652663 1:-77164474 None:intergenic
CTCTAGGACCAGATGACATG+TGG 0.653845 1:+77173749 MsG0180004374.01.T01:CDS
GTCTATAGTGGTGAAAGAGG+TGG 0.657063 1:+77169924 MsG0180004374.01.T01:CDS
ATTGAAATGAAGGACTCGGA+TGG 0.658538 1:+77171602 MsG0180004374.01.T01:CDS
TAAAGGAGTAGAACAGCACA+AGG 0.658863 1:+77169175 MsG0180004374.01.T01:CDS
GCAATCAGCAACCATTACGG+TGG 0.659658 1:+77174085 MsG0180004374.01.T01:CDS
TAGCTCATAGAGTTCACTCA+AGG 0.664124 1:-77169141 None:intergenic
CAATTGTCTAGGTACAAAGG+TGG 0.670376 1:+77168253 MsG0180004374.01.T01:intron
CTAATTCTCACAGTGAACTG+AGG 0.674842 1:+77173428 MsG0180004374.01.T01:CDS
TCAGAATTATCAATTGGACC+GGG 0.676607 1:-77167806 None:intergenic
TGCAACAGCAGTTCGCCCAG+AGG 0.677930 1:-77170262 None:intergenic
TGCCTGGTTCATATGCTGAA+AGG 0.678645 1:+77174457 MsG0180004374.01.T01:three_prime_UTR
TTCTTGACCGAAGAACCTCT+AGG 0.686595 1:+77173733 MsG0180004374.01.T01:CDS
ATCAAAACATGTTATAGACG+AGG 0.690132 1:+77174567 MsG0180004374.01.T01:three_prime_UTR
CTTTGCACCAGAGAACAAGA+GGG 0.690692 1:+77173460 MsG0180004374.01.T01:CDS
TAGAAGGTATTCCATCACAA+TGG 0.694601 1:-77167721 None:intergenic
TTGAAGATAACTGATAGACC+CGG 0.704135 1:+77167788 MsG0180004374.01.T01:CDS
GAGTGACCATTAGACAAGGT+AGG 0.713316 1:-77169825 None:intergenic
TAACCCTAGATAGATTGAGG+GGG 0.713472 1:-77164473 None:intergenic
TTACAGCGATGAGATCAACA+TGG 0.715649 1:+77170046 MsG0180004374.01.T01:CDS
TCATCTGTATCAATTGCAGG+GGG 0.722106 1:+77169801 MsG0180004374.01.T01:CDS
GTGAATGGGGAAGTTCACAA+AGG 0.723784 1:-77173999 None:intergenic
TTTGCACCAGAGAACAAGAG+GGG 0.735618 1:+77173461 MsG0180004374.01.T01:CDS
ACTTGAGTGACCATTAGACA+AGG 0.740534 1:-77169829 None:intergenic
AGGAGTAGAACAGCACAAGG+TGG 0.741330 1:+77169178 MsG0180004374.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTTAAAAAATTAATT+AGG + Chr1:77173849-77173868 MsG0180004374.01.T01:intron 0.0%
!! ATAAAATGTAATACAATATA+GGG - Chr1:77167624-77167643 None:intergenic 10.0%
!! TATAAAATGTAATACAATAT+AGG - Chr1:77167625-77167644 None:intergenic 10.0%
!! TTATAAATTATGTAATTTCA+TGG - Chr1:77168904-77168923 None:intergenic 10.0%
!!! ATATTGATAGTTTATTTTTT+TGG - Chr1:77166362-77166381 None:intergenic 10.0%
!!! TAATAAAAAGCTTTTAATTT+TGG - Chr1:77166189-77166208 None:intergenic 10.0%
!!! TTAAATTTTTATGGTTAATT+GGG - Chr1:77168722-77168741 None:intergenic 10.0%
!!! TTATATGATTTTGAATTTTA+GGG + Chr1:77164880-77164899 MsG0180004374.01.T01:intron 10.0%
!!! TTTAAATTTTTATGGTTAAT+TGG - Chr1:77168723-77168742 None:intergenic 10.0%
!!! TTTTTAAGTTACTATAATTA+TGG + Chr1:77169498-77169517 MsG0180004374.01.T01:intron 10.0%
!! AAAAATCATTGACAAATTAA+GGG - Chr1:77165889-77165908 None:intergenic 15.0%
!! AATAGAAAACAAAAATCATA+AGG - Chr1:77169100-77169119 None:intergenic 15.0%
!! AATTCTGATATAATTTCAAA+TGG + Chr1:77167821-77167840 MsG0180004374.01.T01:CDS 15.0%
!! AATTGTAAAATTAAGCAAAA+AGG + Chr1:77168384-77168403 MsG0180004374.01.T01:CDS 15.0%
!! AGAATTATTTCATATTTCAT+TGG - Chr1:77170550-77170569 None:intergenic 15.0%
!! ATTATAAGACATTTATTGAT+GGG + Chr1:77168946-77168965 MsG0180004374.01.T01:intron 15.0%
!! ATTATATCAGAATTATCAAT+TGG - Chr1:77167815-77167834 None:intergenic 15.0%
!! TACATCACAAATTATATATT+GGG - Chr1:77167356-77167375 None:intergenic 15.0%
!! TATACATCTTAGTTTATTAA+AGG + Chr1:77171292-77171311 MsG0180004374.01.T01:intron 15.0%
!! TATACTTTATTATTTCCAAT+AGG + Chr1:77164835-77164854 MsG0180004374.01.T01:CDS 15.0%
!! TATGTGTTTAATTAATAGAT+TGG - Chr1:77167383-77167402 None:intergenic 15.0%
!! TATTATAAGACATTTATTGA+TGG + Chr1:77168945-77168964 MsG0180004374.01.T01:intron 15.0%
!! TCCAGATAAAAAAAAAAAAA+AGG - Chr1:77169015-77169034 None:intergenic 15.0%
!! TTTATATTAAGTTACAGTTT+GGG + Chr1:77170524-77170543 MsG0180004374.01.T01:intron 15.0%
!!! AAAACCAATAAGATTTTAAA+TGG - Chr1:77165490-77165509 None:intergenic 15.0%
!!! AAACCAATAAGATTTTAAAT+GGG - Chr1:77165489-77165508 None:intergenic 15.0%
!!! AGATCAATGAATAAAATTTT+TGG - Chr1:77171214-77171233 None:intergenic 15.0%
!!! ATTTTAACCTTATTTTAGTT+GGG + Chr1:77170769-77170788 MsG0180004374.01.T01:intron 15.0%
!!! CCCTAATAAAATTTTAAAAA+GGG - Chr1:77165041-77165060 None:intergenic 15.0%
!!! CCCTTTTTAAAATTTTATTA+GGG + Chr1:77165038-77165057 MsG0180004374.01.T01:intron 15.0%
!!! CCTTTTTAAAATTTTATTAG+GGG + Chr1:77165039-77165058 MsG0180004374.01.T01:intron 15.0%
!!! CTTTTTAAAATTTTATTAGG+GGG + Chr1:77165040-77165059 MsG0180004374.01.T01:intron 15.0%
!!! GATCAATGAATAAAATTTTT+GGG - Chr1:77171213-77171232 None:intergenic 15.0%
!!! GTTATATGATTTTGAATTTT+AGG + Chr1:77164879-77164898 MsG0180004374.01.T01:intron 15.0%
!!! GTTTTGATATGTTATTTTTA+GGG + Chr1:77164991-77165010 MsG0180004374.01.T01:intron 15.0%
!!! TATAACATGTTTTGATTAAT+TGG - Chr1:77174563-77174582 None:intergenic 15.0%
!!! TATTGGTTGTAAATTATATT+AGG + Chr1:77169274-77169293 MsG0180004374.01.T01:intron 15.0%
!!! TATTTTAACCTTATTTTAGT+TGG + Chr1:77170768-77170787 MsG0180004374.01.T01:intron 15.0%
!!! TCCTTAATAAGATTTTAAAA+GGG - Chr1:77165162-77165181 None:intergenic 15.0%
!!! TCCTTTTTTTTTTTTTTATC+TGG + Chr1:77169011-77169030 MsG0180004374.01.T01:intron 15.0%
!!! TGTTTTGATATGTTATTTTT+AGG + Chr1:77164990-77165009 MsG0180004374.01.T01:intron 15.0%
!!! TTGTTTTTTTTTATCTGTTA+AGG + Chr1:77165183-77165202 MsG0180004374.01.T01:intron 15.0%
!!! TTTTATATTAAGTTACAGTT+TGG + Chr1:77170523-77170542 MsG0180004374.01.T01:intron 15.0%
!!! TTTTGTACAATTTTGATTTT+TGG + Chr1:77170370-77170389 MsG0180004374.01.T01:intron 15.0%
!!! TTTTTCTTTCACTTTTTAAA+TGG + Chr1:77170613-77170632 MsG0180004374.01.T01:intron 15.0%
!! AAAAAAAACAATTGAAGAAG+AGG - Chr1:77164612-77164631 None:intergenic 20.0%
!! AAGATAAGATTAAAACCTAT+TGG - Chr1:77164853-77164872 None:intergenic 20.0%
!! AATTATATTAGGCTTCTATT+TGG + Chr1:77169285-77169304 MsG0180004374.01.T01:intron 20.0%
!! ACACTCAAATTATCATATAT+TGG - Chr1:77169549-77169568 None:intergenic 20.0%
!! ACATCACAAATTATATATTG+GGG - Chr1:77167355-77167374 None:intergenic 20.0%
!! AGCAATTCTTTGTTAAAAAT+TGG + Chr1:77170655-77170674 MsG0180004374.01.T01:intron 20.0%
!! AGCCCTAATTAAAAAAAATA+CGG + Chr1:77165638-77165657 MsG0180004374.01.T01:intron 20.0%
!! ATCAGTGAAATATAAATAAC+TGG - Chr1:77173114-77173133 None:intergenic 20.0%
!! ATGTATACGTAATACAAATT+AGG - Chr1:77171279-77171298 None:intergenic 20.0%
!! ATTATATTAGGCTTCTATTT+GGG + Chr1:77169286-77169305 MsG0180004374.01.T01:intron 20.0%
!! CAAAAATCATTGACAAATTA+AGG - Chr1:77165890-77165909 None:intergenic 20.0%
!! CAAATTACAAAATCTAGATT+TGG - Chr1:77174208-77174227 None:intergenic 20.0%
!! GATAAGTATACCTTAATAAA+TGG - Chr1:77164567-77164586 None:intergenic 20.0%
!! GTACATCACAAATTATATAT+TGG - Chr1:77167357-77167376 None:intergenic 20.0%
!! TAATATAACAAGTTTGCATT+AGG + Chr1:77171356-77171375 MsG0180004374.01.T01:intron 20.0%
!! TAGATTAGATCCATTTATTA+AGG + Chr1:77164554-77164573 MsG0180004374.01.T01:intron 20.0%
!! TATCATGTTATAACCAAATT+TGG - Chr1:77169049-77169068 None:intergenic 20.0%
!! TCAATCATATGTTATGAATA+AGG + Chr1:77170480-77170499 MsG0180004374.01.T01:intron 20.0%
!! TGTTATATTATATCAAATGC+AGG - Chr1:77171346-77171365 None:intergenic 20.0%
!! TGTTTAATTAATAGATTGGA+TGG - Chr1:77167379-77167398 None:intergenic 20.0%
!! TTCTATATTTGTAATCTTCT+GGG - Chr1:77168984-77169003 None:intergenic 20.0%
!! TTTCTATATTTGTAATCTTC+TGG - Chr1:77168985-77169004 None:intergenic 20.0%
!!! AACCAATAAGATTTTAAATG+GGG - Chr1:77165488-77165507 None:intergenic 20.0%
!!! AATCCTACTAATTTGTTTTT+TGG + Chr1:77167257-77167276 MsG0180004374.01.T01:intron 20.0%
!!! AGCCGTATTTTTTTTAATTA+GGG - Chr1:77165643-77165662 None:intergenic 20.0%
!!! AGTAGTGAGTTATTTTTTTT+AGG + Chr1:77171514-77171533 MsG0180004374.01.T01:intron 20.0%
!!! ATCCTACTAATTTGTTTTTT+GGG + Chr1:77167258-77167277 MsG0180004374.01.T01:intron 20.0%
!!! CCCCTAATAAAATTTTAAAA+AGG - Chr1:77165042-77165061 None:intergenic 20.0%
!!! CCTTAATAAGATTTTAAAAG+GGG - Chr1:77165161-77165180 None:intergenic 20.0%
!!! CTCCTTAATAAGATTTTAAA+AGG - Chr1:77165163-77165182 None:intergenic 20.0%
!!! CTCTCATTAGATTTTAAAAA+GGG - Chr1:77165326-77165345 None:intergenic 20.0%
!!! CTTCTGTTATTTCATTTTAT+CGG + Chr1:77174692-77174711 MsG0180004374.01.T01:three_prime_UTR 20.0%
!!! GATCATATATCTTTCATTTT+GGG + Chr1:77167157-77167176 MsG0180004374.01.T01:intron 20.0%
!!! GCCCTTTTTAAAATTTTATT+AGG + Chr1:77165037-77165056 MsG0180004374.01.T01:intron 20.0%
!!! GTGATAATTTTGATGAATTA+GGG + Chr1:77164652-77164671 MsG0180004374.01.T01:intron 20.0%
!!! TAGCCGTATTTTTTTTAATT+AGG - Chr1:77165644-77165663 None:intergenic 20.0%
!!! TATTTCTAATTTTGTTTTCC+TGG - Chr1:77172418-77172437 None:intergenic 20.0%
!!! TCTCTCATTAGATTTTAAAA+AGG - Chr1:77165327-77165346 None:intergenic 20.0%
!!! TGATCATATATCTTTCATTT+TGG + Chr1:77167156-77167175 MsG0180004374.01.T01:intron 20.0%
!!! TGTGATAATTTTGATGAATT+AGG + Chr1:77164651-77164670 MsG0180004374.01.T01:intron 20.0%
!!! TTTTACTGTAATTTTTTCCT+AGG + Chr1:77167051-77167070 MsG0180004374.01.T01:intron 20.0%
!!! TTTTATTTCCGTTTCTTATT+GGG - Chr1:77166867-77166886 None:intergenic 20.0%
!!! TTTTTATCTTACAATTGTCT+AGG + Chr1:77168242-77168261 MsG0180004374.01.T01:intron 20.0%
!!! TTTTTATTTCCGTTTCTTAT+TGG - Chr1:77166868-77166887 None:intergenic 20.0%
! AAAACTAACTACAAGAAAAG+AGG - Chr1:77168431-77168450 None:intergenic 25.0%
! AAAATAAAAGCCAACAGAAA+TGG - Chr1:77170099-77170118 None:intergenic 25.0%
! AAACGGAAATAAAAATGTTG+TGG + Chr1:77166873-77166892 MsG0180004374.01.T01:intron 25.0%
! AAATTAGGAGATTACAATCA+TGG + Chr1:77170977-77170996 MsG0180004374.01.T01:intron 25.0%
! AACAAAAATCAAAGTGTACA+AGG - Chr1:77173819-77173838 None:intergenic 25.0%
! AAGTATGTGAAAAGTAAAGA+TGG + Chr1:77174037-77174056 MsG0180004374.01.T01:CDS 25.0%
! AATAGCTTTCAGAAATTAGT+AGG - Chr1:77171467-77171486 None:intergenic 25.0%
! AATCAATCAGACATTGATAA+TGG + Chr1:77172750-77172769 MsG0180004374.01.T01:intron 25.0%
! AATTAGGAGATTACAATCAT+GGG + Chr1:77170978-77170997 MsG0180004374.01.T01:intron 25.0%
! ACCATAATGTTCTATCATTA+TGG - Chr1:77172845-77172864 None:intergenic 25.0%
! AGAATGACAATTAAGAGAAA+GGG - Chr1:77174935-77174954 None:intergenic 25.0%
! AGCAAAGTCTTGATTAAAAA+TGG - Chr1:77167657-77167676 None:intergenic 25.0%
! ATAAAGATTAGTATTTCGCT+TGG + Chr1:77168651-77168670 MsG0180004374.01.T01:intron 25.0%
! ATAAATTTGTATCCCGAAAA+CGG + Chr1:77165126-77165145 MsG0180004374.01.T01:intron 25.0%
! ATCATTCTTGGAATAATGAA+GGG - Chr1:77165950-77165969 None:intergenic 25.0%
! ATCTAAACATCTTAAGAACT+TGG - Chr1:77167525-77167544 None:intergenic 25.0%
! ATCTTAGTTTATTAAAGGAC+TGG + Chr1:77171297-77171316 MsG0180004374.01.T01:intron 25.0%
! ATGTTGTACCAAATTTAAAG+GGG - Chr1:77167222-77167241 None:intergenic 25.0%
! ATTATATTGCTATATGCATG+TGG + Chr1:77164945-77164964 MsG0180004374.01.T01:intron 25.0%
! ATTGCTTCAGAAAAGTTATT+GGG - Chr1:77166700-77166719 None:intergenic 25.0%
! CAAATTAGGATTAACTCAAA+TGG - Chr1:77171265-77171284 None:intergenic 25.0%
! CCATAATGTTCTATCATTAT+GGG - Chr1:77172844-77172863 None:intergenic 25.0%
! CCTATTAGTAAAGTACATTA+CGG - Chr1:77174769-77174788 None:intergenic 25.0%
! CTTAAAAATATCCACTTTGT+AGG - Chr1:77169486-77169505 None:intergenic 25.0%
! GAAAACAAAAATCATAAGGA+TGG - Chr1:77169096-77169115 None:intergenic 25.0%
! GAAAGAAATAAAAGATTTGC+TGG + Chr1:77166401-77166420 MsG0180004374.01.T01:intron 25.0%
! GAAATATAAATAACTGGTTG+TGG - Chr1:77173108-77173127 None:intergenic 25.0%
! GAATTGATAGAAATCAATGA+AGG - Chr1:77171831-77171850 None:intergenic 25.0%
! GATGTTGTACCAAATTTAAA+GGG - Chr1:77167223-77167242 None:intergenic 25.0%
! GATTATTAATTATGATGCAG+AGG - Chr1:77166057-77166076 None:intergenic 25.0%
! GGTAATGATAAGTACATAAA+GGG - Chr1:77172021-77172040 None:intergenic 25.0%
! GTAATGATAAGTACATAAAG+GGG - Chr1:77172020-77172039 None:intergenic 25.0%
! TAAAAAAAATACGGCTACTA+GGG + Chr1:77165647-77165666 MsG0180004374.01.T01:intron 25.0%
! TAAACAAACGTGTTAAAAGA+TGG - Chr1:77168100-77168119 None:intergenic 25.0%
! TAATGCCAATGATTAGAAAA+GGG + Chr1:77168455-77168474 MsG0180004374.01.T01:intron 25.0%
! TATCTTCAAATGAACAGTAT+CGG - Chr1:77167777-77167796 None:intergenic 25.0%
! TCTAAACATCTTAAGAACTT+GGG - Chr1:77167524-77167543 None:intergenic 25.0%
! TTAAAAAAAATACGGCTACT+AGG + Chr1:77165646-77165665 MsG0180004374.01.T01:intron 25.0%
! TTTAACACTTATGACAAAAC+CGG - Chr1:77165573-77165592 None:intergenic 25.0%
! TTTAAGAACTAAAATGGTAG+CGG + Chr1:77171177-77171196 MsG0180004374.01.T01:intron 25.0%
! TTTCTTGAATAAAATGCTCA+GGG + Chr1:77171937-77171956 MsG0180004374.01.T01:intron 25.0%
!! AACAATCTGTCTTCAAATTT+TGG - Chr1:77174534-77174553 None:intergenic 25.0%
!! AATTATGGTTTTCCATTAGA+AGG + Chr1:77169513-77169532 MsG0180004374.01.T01:intron 25.0%
!! AATTTAAAACAAAAACCGCA+TGG - Chr1:77170962-77170981 None:intergenic 25.0%
!! AGTTGATTGATGATAATAAG+TGG + Chr1:77174288-77174307 MsG0180004374.01.T01:intron 25.0%
!! ATAGAAGTACAAAGCTTTAA+TGG + Chr1:77169451-77169470 MsG0180004374.01.T01:intron 25.0%
!! ATTACTGTCTTTTATTCTGA+TGG + Chr1:77172072-77172091 MsG0180004374.01.T01:intron 25.0%
!! CTACAAATATCAAGCATTTT+AGG - Chr1:77168210-77168229 None:intergenic 25.0%
!! CTATTCCTGTATTGTATTTT+AGG + Chr1:77169115-77169134 MsG0180004374.01.T01:intron 25.0%
!! CTTCCACATTTTATGTAATT+GGG - Chr1:77174850-77174869 None:intergenic 25.0%
!! TAGAAGTACAAAGCTTTAAT+GGG + Chr1:77169452-77169471 MsG0180004374.01.T01:intron 25.0%
!! TATATTTCACTGATTGTACA+CGG + Chr1:77173120-77173139 MsG0180004374.01.T01:intron 25.0%
!! TCTTCCACATTTTATGTAAT+TGG - Chr1:77174851-77174870 None:intergenic 25.0%
!! TGGTAATGATAAGTACATAA+AGG - Chr1:77172022-77172041 None:intergenic 25.0%
!! TTACTGTCTTTTATTCTGAT+GGG + Chr1:77172073-77172092 MsG0180004374.01.T01:intron 25.0%
!! TTCCACATTTTATGTAATTG+GGG - Chr1:77174849-77174868 None:intergenic 25.0%
!! TTTTCTTGAATAAAATGCTC+AGG + Chr1:77171936-77171955 MsG0180004374.01.T01:intron 25.0%
!!! AAAGATTTGCTGGAATTAAT+AGG + Chr1:77166411-77166430 MsG0180004374.01.T01:intron 25.0%
!!! AAAGGATCATTCATTTTTCA+GGG + Chr1:77170735-77170754 MsG0180004374.01.T01:intron 25.0%
!!! AAATTTTTTGTTAACCGTGT+TGG - Chr1:77165834-77165853 None:intergenic 25.0%
!!! ATCTTTACTTTTCACATACT+TGG - Chr1:77174038-77174057 None:intergenic 25.0%
!!! CCCCTTTTAAAATCTTATTA+AGG + Chr1:77165158-77165177 MsG0180004374.01.T01:intron 25.0%
!!! CTCAATACTTTTTTGCTTTT+TGG + Chr1:77167960-77167979 MsG0180004374.01.T01:intron 25.0%
!!! GTATTTTTTTTAATTAGGGC+TGG - Chr1:77165639-77165658 None:intergenic 25.0%
!!! TAAAGGATCATTCATTTTTC+AGG + Chr1:77170734-77170753 MsG0180004374.01.T01:intron 25.0%
!!! TACTGCTTTAAGAACTAAAA+TGG + Chr1:77171171-77171190 MsG0180004374.01.T01:intron 25.0%
!!! TATTTCTTTGTTTTCATGCT+TGG + Chr1:77173705-77173724 MsG0180004374.01.T01:CDS 25.0%
!!! TCTGGTTTTAATTTCTATCA+GGG + Chr1:77169855-77169874 MsG0180004374.01.T01:CDS 25.0%
!!! TGCGGTTTTTGTTTTAAATT+AGG + Chr1:77170962-77170981 MsG0180004374.01.T01:intron 25.0%
!!! TTTTCTTGTAGTTAGTTTTC+CGG + Chr1:77168432-77168451 MsG0180004374.01.T01:intron 25.0%
AAAATCGAGTACAAAAGCTA+TGG + Chr1:77167570-77167589 MsG0180004374.01.T01:intron 30.0%
AAACTGTATCTTCATTCCAA+TGG - Chr1:77165923-77165942 None:intergenic 30.0%
AAAGCCTTACATTGAAATGA+AGG + Chr1:77171592-77171611 MsG0180004374.01.T01:CDS 30.0%
AAAGGATGAAGAACATATTG+TGG + Chr1:77172371-77172390 MsG0180004374.01.T01:CDS 30.0%
AAAGGTTATACACATAGGAT+GGG - Chr1:77174063-77174082 None:intergenic 30.0%
AAATCGAGTACAAAAGCTAT+GGG + Chr1:77167571-77167590 MsG0180004374.01.T01:intron 30.0%
AAATGATCAACAACTCACAT+AGG - Chr1:77165542-77165561 None:intergenic 30.0%
AAGAGTTTATGTGTTCAGAT+AGG - Chr1:77172788-77172807 None:intergenic 30.0%
AAGATCAGAGTAACAAAAAG+CGG - Chr1:77167412-77167431 None:intergenic 30.0%
AAGTCTTGATTAAAAATGGC+AGG - Chr1:77167653-77167672 None:intergenic 30.0%
AAGTGAAAAACCAAAATCTC+TGG - Chr1:77173935-77173954 None:intergenic 30.0%
AATGAAGGTTTATTGAGATG+GGG - Chr1:77171816-77171835 None:intergenic 30.0%
AATGGGAAATGAATTAGCAT+TGG + Chr1:77169758-77169777 MsG0180004374.01.T01:CDS 30.0%
ACAGTAAAAAAACAAAGAGC+AGG - Chr1:77167040-77167059 None:intergenic 30.0%
ACCAATAAAATGCAAAACGA+TGG - Chr1:77169261-77169280 None:intergenic 30.0%
ACCTTTAACAGTGGTTATAT+GGG + Chr1:77167448-77167467 MsG0180004374.01.T01:intron 30.0%
AGAAAAGTTAGATCTACTCT+TGG + Chr1:77172229-77172248 MsG0180004374.01.T01:intron 30.0%
AGTGACATTACAGTGAATAT+GGG + Chr1:77172564-77172583 MsG0180004374.01.T01:intron 30.0%
ATAAAATGTGGAAGAGATGA+TGG + Chr1:77174856-77174875 MsG0180004374.01.T01:three_prime_UTR 30.0%
ATAGAATTGCAATGAATGTC+TGG + Chr1:77165725-77165744 MsG0180004374.01.T01:intron 30.0%
ATATAAAGGTCTTTGTTGAC+TGG + Chr1:77173584-77173603 MsG0180004374.01.T01:CDS 30.0%
ATATGATGCAAGCTATTTGA+GGG + Chr1:77173627-77173646 MsG0180004374.01.T01:CDS 30.0%
ATATTCTTGACGTAAAGAAG+TGG - Chr1:77167500-77167519 None:intergenic 30.0%
ATCAAAACATGTTATAGACG+AGG + Chr1:77174567-77174586 MsG0180004374.01.T01:three_prime_UTR 30.0%
ATCAGAATTATCAATTGGAC+CGG - Chr1:77167810-77167829 None:intergenic 30.0%
ATCGTTCACAAAATAGTTTG+TGG + Chr1:77165692-77165711 MsG0180004374.01.T01:intron 30.0%
ATGTACATATGTCTCAATGT+TGG - Chr1:77173305-77173324 None:intergenic 30.0%
ATGTTATGAAAGAAACCAGA+TGG - Chr1:77170882-77170901 None:intergenic 30.0%
ATTACGTTGTTAGGATTCTA+GGG + Chr1:77174821-77174840 MsG0180004374.01.T01:three_prime_UTR 30.0%
ATTGAAGTCAATGATTCCAA+TGG - Chr1:77172351-77172370 None:intergenic 30.0%
ATTTATTCCCATTTGTACTC+TGG - Chr1:77172733-77172752 None:intergenic 30.0%
CAATGAAGGTTTATTGAGAT+GGG - Chr1:77171817-77171836 None:intergenic 30.0%
CAATGACAACAATAAATGCT+TGG + Chr1:77165597-77165616 MsG0180004374.01.T01:intron 30.0%
CATTGCTTCAGAAAAGTTAT+TGG - Chr1:77166701-77166720 None:intergenic 30.0%
CCCATAATGATAGAACATTA+TGG + Chr1:77172841-77172860 MsG0180004374.01.T01:intron 30.0%
CCGTAATGTACTTTACTAAT+AGG + Chr1:77174766-77174785 MsG0180004374.01.T01:three_prime_UTR 30.0%
CTTCGTTAGTTAAAACAAGT+TGG - Chr1:77173510-77173529 None:intergenic 30.0%
CTTTCAGAAATTAGTAGGAA+AGG - Chr1:77171462-77171481 None:intergenic 30.0%
GAAGGAGTTAATTAAGCAAT+CGG + Chr1:77164788-77164807 MsG0180004374.01.T01:CDS 30.0%
GACATATGTACATAGAATGT+TGG + Chr1:77173312-77173331 MsG0180004374.01.T01:CDS 30.0%
GACCCAAAAAACAAATTAGT+AGG - Chr1:77167263-77167282 None:intergenic 30.0%
GAGAATGACAATTAAGAGAA+AGG - Chr1:77174936-77174955 None:intergenic 30.0%
GATAAATATGACGTCTATAG+TGG + Chr1:77169912-77169931 MsG0180004374.01.T01:CDS 30.0%
GATCATTCTTGGAATAATGA+AGG - Chr1:77165951-77165970 None:intergenic 30.0%
GATTAGAATAGCACCAAATT+TGG + Chr1:77169033-77169052 MsG0180004374.01.T01:intron 30.0%
GGATACAGTTAATAATCTTG+TGG + Chr1:77167986-77168005 MsG0180004374.01.T01:intron 30.0%
GGATGTTGTACCAAATTTAA+AGG - Chr1:77167224-77167243 None:intergenic 30.0%
GTAAATTTACCTCCGATAAA+CGG + Chr1:77165453-77165472 MsG0180004374.01.T01:intron 30.0%
GTAATGCCAATGATTAGAAA+AGG + Chr1:77168454-77168473 MsG0180004374.01.T01:intron 30.0%
GTGAGCAAGAGATAAATTAA+GGG - Chr1:77169680-77169699 None:intergenic 30.0%
GTTGTAGTTGTAATAAGCTT+TGG + Chr1:77172621-77172640 MsG0180004374.01.T01:intron 30.0%
TAAAATCTCTACGAGAACTT+CGG + Chr1:77168855-77168874 MsG0180004374.01.T01:intron 30.0%
TAAAGGTTATACACATAGGA+TGG - Chr1:77174064-77174083 None:intergenic 30.0%
TAAGATATTGTGTACCACAA+TGG + Chr1:77170142-77170161 MsG0180004374.01.T01:intron 30.0%
TACGGTGCATAAAATTGTAA+TGG - Chr1:77174751-77174770 None:intergenic 30.0%
TAGTTCTTAAAGCAGTAGAA+AGG - Chr1:77171168-77171187 None:intergenic 30.0%
TATAAGAGCAATGAGAACAT+AGG + Chr1:77166379-77166398 MsG0180004374.01.T01:intron 30.0%
TATATGATGCAAGCTATTTG+AGG + Chr1:77173626-77173645 MsG0180004374.01.T01:CDS 30.0%
TATTAAAGGACTGGAGAATT+GGG + Chr1:77171306-77171325 MsG0180004374.01.T01:intron 30.0%
TCAAATGGTAGTAATTGTGA+CGG + Chr1:77167836-77167855 MsG0180004374.01.T01:CDS 30.0%
TCAATACCAAGCAAAGAATT+AGG - Chr1:77169636-77169655 None:intergenic 30.0%
TCAATGAAGGTTTATTGAGA+TGG - Chr1:77171818-77171837 None:intergenic 30.0%
TCGTTATCTAGATAATCCAT+TGG + Chr1:77172332-77172351 MsG0180004374.01.T01:CDS 30.0%
TCTAAGAAAAATTCAGCAAG+TGG - Chr1:77170023-77170042 None:intergenic 30.0%
TCTAGAAAACCTGTTCATTT+GGG + Chr1:77174591-77174610 MsG0180004374.01.T01:three_prime_UTR 30.0%
TCTTCCAAATAAGTAACCAA+GGG - Chr1:77173265-77173284 None:intergenic 30.0%
TGAATTACCCCCTTTAAATT+TGG + Chr1:77167211-77167230 MsG0180004374.01.T01:intron 30.0%
TGATATCCTAATTCTTTGCT+TGG + Chr1:77169627-77169646 MsG0180004374.01.T01:intron 30.0%
TGCATAAAGGTTATACACAT+AGG - Chr1:77174068-77174087 None:intergenic 30.0%
TGCTTTAATGTCTCTAATAC+TGG + Chr1:77173166-77173185 MsG0180004374.01.T01:intron 30.0%
TGTGAGCAAGAGATAAATTA+AGG - Chr1:77169681-77169700 None:intergenic 30.0%
TGTTATGAAAGAAACCAGAT+GGG - Chr1:77170881-77170900 None:intergenic 30.0%
TGTTGTACCAAATTTAAAGG+GGG - Chr1:77167221-77167240 None:intergenic 30.0%
TTAATTTCAGCTTCAGAAAC+AGG - Chr1:77174341-77174360 None:intergenic 30.0%
TTACAATTGTCTAGGTACAA+AGG + Chr1:77168250-77168269 MsG0180004374.01.T01:intron 30.0%
TTACATTGAAATGAAGGACT+CGG + Chr1:77171598-77171617 MsG0180004374.01.T01:CDS 30.0%
TTATTAAAGGACTGGAGAAT+TGG + Chr1:77171305-77171324 MsG0180004374.01.T01:intron 30.0%
TTCTATCAATTCTTGAGCTT+GGG + Chr1:77171839-77171858 MsG0180004374.01.T01:intron 30.0%
TTCTTCCAAATAAGTAACCA+AGG - Chr1:77173266-77173285 None:intergenic 30.0%
TTGCTTCAGAAAAGTTATTG+GGG - Chr1:77166699-77166718 None:intergenic 30.0%
TTTAGATATTCATCGACCAT+TGG + Chr1:77167865-77167884 MsG0180004374.01.T01:CDS 30.0%
TTTCTAATCATTGGCATTAC+CGG - Chr1:77168454-77168473 None:intergenic 30.0%
TTTCTATCAATTCTTGAGCT+TGG + Chr1:77171838-77171857 MsG0180004374.01.T01:intron 30.0%
! AGCCCCATTTAAAATCTTAT+TGG + Chr1:77165483-77165502 MsG0180004374.01.T01:intron 30.0%
! ATAGACATTTTATACCCATC+TGG + Chr1:77170864-77170883 MsG0180004374.01.T01:intron 30.0%
! ATTGAAATTTTGCCACATTC+AGG - Chr1:77171988-77172007 None:intergenic 30.0%
! CAAAACCCTTTTCTAATCAT+TGG - Chr1:77168463-77168482 None:intergenic 30.0%
! CAATGATTAGAAAAGGGTTT+TGG + Chr1:77168461-77168480 MsG0180004374.01.T01:intron 30.0%
! CGTTGATGTTTGATGATTAT+TGG + Chr1:77165424-77165443 MsG0180004374.01.T01:intron 30.0%
! GAAGAATGTGCTTTTCTTAA+AGG - Chr1:77173340-77173359 None:intergenic 30.0%
! GCATTTTTATATAGCAACGA+TGG + Chr1:77165771-77165790 MsG0180004374.01.T01:intron 30.0%
! TAACAGGAAGTTTTTGTCAT+AGG - Chr1:77170433-77170452 None:intergenic 30.0%
! TCATGGGTTTGTAATTTTGT+AGG + Chr1:77170994-77171013 MsG0180004374.01.T01:intron 30.0%
! TCCACATTTTATGTAATTGG+GGG - Chr1:77174848-77174867 None:intergenic 30.0%
! TCCATCGTTTTGCATTTTAT+TGG + Chr1:77169257-77169276 MsG0180004374.01.T01:intron 30.0%
! TTAAGAGTATACACTGAAAG+AGG - Chr1:77172470-77172489 None:intergenic 30.0%
! TTGGTGTTTGATATCACTAT+AGG + Chr1:77168520-77168539 MsG0180004374.01.T01:intron 30.0%
! TTTTATGCTGTCTATATCTC+AGG + Chr1:77172290-77172309 MsG0180004374.01.T01:intron 30.0%
! TTTTGCACTGCAAAGTAAAA+CGG - Chr1:77174509-77174528 None:intergenic 30.0%
!! AAATTTTGCAGTCTAGAACT+TGG + Chr1:77174662-77174681 MsG0180004374.01.T01:three_prime_UTR 30.0%
!! AACCTTGTGTTATTTGTTCT+GGG + Chr1:77174264-77174283 MsG0180004374.01.T01:intron 30.0%
!! AGGTAATGTTACTTTACCTT+AGG + Chr1:77165203-77165222 MsG0180004374.01.T01:intron 30.0%
!! ATGTTAACCATTGTTGATTC+TGG + Chr1:77170900-77170919 MsG0180004374.01.T01:intron 30.0%
!! GGAATCATTGACTTCAATAA+AGG + Chr1:77172353-77172372 MsG0180004374.01.T01:CDS 30.0%
!! GTTTTCAAGAACTCATCTAA+AGG + Chr1:77170717-77170736 MsG0180004374.01.T01:intron 30.0%
!! TAACCTTGTGTTATTTGTTC+TGG + Chr1:77174263-77174282 MsG0180004374.01.T01:intron 30.0%
!! TAAGATTGCGTTGATGTTTT+TGG + Chr1:77173772-77173791 MsG0180004374.01.T01:intron 30.0%
!! TGAGTGTTGGAAAAATCATA+TGG + Chr1:77171649-77171668 MsG0180004374.01.T01:CDS 30.0%
!!! CAACTTGTTTTAACTAACGA+AGG + Chr1:77173508-77173527 MsG0180004374.01.T01:CDS 30.0%
!!! CTGTTATTTCATTTTATCGG+AGG + Chr1:77174695-77174714 MsG0180004374.01.T01:three_prime_UTR 30.0%
!!! GTCTGGTTTTAATTTCTATC+AGG + Chr1:77169854-77169873 MsG0180004374.01.T01:CDS 30.0%
!!! GTGTTATTTTATCAGAGAGT+TGG + Chr1:77174377-77174396 MsG0180004374.01.T01:CDS 30.0%
!!! GTTGATCATTTGTCGTTTTT+GGG + Chr1:77165068-77165087 MsG0180004374.01.T01:intron 30.0%
!!! TACTTTTTTGCTTTTTGGTC+TGG + Chr1:77167965-77167984 MsG0180004374.01.T01:intron 30.0%
!!! TGTTGATCATTTGTCGTTTT+TGG + Chr1:77165067-77165086 MsG0180004374.01.T01:intron 30.0%
!!! TTGGCTTTTATTTTTTCTCC+TGG + Chr1:77170105-77170124 MsG0180004374.01.T01:intron 30.0%
!!! TTTTAGGGTTTCTCGAATAT+CGG + Chr1:77165006-77165025 MsG0180004374.01.T01:intron 30.0%
AAAACAGATTTGCAAGCTAG+TGG - Chr1:77165973-77165992 None:intergenic 35.0%
AAAACCCAGTGCACATATAA+AGG + Chr1:77173570-77173589 MsG0180004374.01.T01:CDS 35.0%
AAAATCTCTACGAGAACTTC+GGG + Chr1:77168856-77168875 MsG0180004374.01.T01:intron 35.0%
AAACACATCCATATCTCACT+AGG - Chr1:77172895-77172914 None:intergenic 35.0%
AAACTTCTATATGCTAAGCC+AGG - Chr1:77173071-77173090 None:intergenic 35.0%
AAAGACCTTTATATGTGCAC+TGG - Chr1:77173578-77173597 None:intergenic 35.0%
AAAGATATCCATTCTTTGGC+TGG - Chr1:77166535-77166554 None:intergenic 35.0%
AACTAACCCTAGATAGATTG+AGG - Chr1:77164479-77164498 None:intergenic 35.0%
AACTAACTTGAGAATCATGC+TGG - Chr1:77170344-77170363 None:intergenic 35.0%
AACTCCCTTGGTTACTTATT+TGG + Chr1:77173258-77173277 MsG0180004374.01.T01:CDS 35.0%
AACTCTAGTCAAAGCTTCAA+TGG - Chr1:77171868-77171887 None:intergenic 35.0%
AACTCTTCCAGAGTACAAAT+GGG + Chr1:77172723-77172742 MsG0180004374.01.T01:intron 35.0%
AACTTGAAAACCATCTGCAT+GGG - Chr1:77167685-77167704 None:intergenic 35.0%
AAGAAAAATTCAGCAAGTGG+TGG - Chr1:77170020-77170039 None:intergenic 35.0%
AAGACCTTTATATGTGCACT+GGG - Chr1:77173577-77173596 None:intergenic 35.0%
AATGGATATCTTTCAGCAGA+GGG + Chr1:77166542-77166561 MsG0180004374.01.T01:intron 35.0%
AATTACGTCCTTGTCGATAT+AGG + Chr1:77166212-77166231 MsG0180004374.01.T01:intron 35.0%
AATTACTATGTTGTGCCATG+CGG + Chr1:77170944-77170963 MsG0180004374.01.T01:intron 35.0%
ACAAAACTGGAAAACGACAA+AGG - Chr1:77165404-77165423 None:intergenic 35.0%
ACAAAGAAATAGCTTCTTGC+CGG - Chr1:77173696-77173715 None:intergenic 35.0%
ACGTAACGATCTAACTTCAA+CGG - Chr1:77164417-77164436 None:intergenic 35.0%
ACGTGTTAAAAGATGGTTTG+CGG - Chr1:77168093-77168112 None:intergenic 35.0%
ACGTTTGTTTAAGTATGCAG+TGG + Chr1:77168109-77168128 MsG0180004374.01.T01:intron 35.0%
ACTAACCCTAGATAGATTGA+GGG - Chr1:77164478-77164497 None:intergenic 35.0%
ACTGGAACCCAACTAAAATA+AGG - Chr1:77170779-77170798 None:intergenic 35.0%
AGAAACATGAGAAAGAACCT+AGG - Chr1:77167071-77167090 None:intergenic 35.0%
AGAAAGAAGAGACTCAAAAG+AGG - Chr1:77166989-77167008 None:intergenic 35.0%
AGACAGTAATTGTCATTGTC+CGG - Chr1:77172062-77172081 None:intergenic 35.0%
AGATCATCTGTATCAATTGC+AGG + Chr1:77169798-77169817 MsG0180004374.01.T01:CDS 35.0%
AGTTCCACAAACTAAGTTTC+AGG + Chr1:77168162-77168181 MsG0180004374.01.T01:intron 35.0%
AGTTTATGTGTTCAGATAGG+TGG - Chr1:77172785-77172804 None:intergenic 35.0%
ATCAACATGGAGAATCCTTT+AGG + Chr1:77170059-77170078 MsG0180004374.01.T01:CDS 35.0%
ATCATCTGTATCAATTGCAG+GGG + Chr1:77169800-77169819 MsG0180004374.01.T01:CDS 35.0%
ATGCAGTCCATCCAATAAAA+AGG - Chr1:77171549-77171568 None:intergenic 35.0%
ATTGATACAGATGATCTTGG+AGG - Chr1:77169795-77169814 None:intergenic 35.0%
CAAATGGTAGTAATTGTGAC+GGG + Chr1:77167837-77167856 MsG0180004374.01.T01:CDS 35.0%
CAACTCATCCCATTATCAAT+CGG - Chr1:77164732-77164751 None:intergenic 35.0%
CAGACAATCAGAAAACTGAT+GGG - Chr1:77172944-77172963 None:intergenic 35.0%
CAGTCACCTTTAGATTAAGT+GGG - Chr1:77168342-77168361 None:intergenic 35.0%
CATATAGGTACCAACTTGAA+TGG - Chr1:77173018-77173037 None:intergenic 35.0%
CATTACGTTGTTAGGATTCT+AGG + Chr1:77174820-77174839 MsG0180004374.01.T01:three_prime_UTR 35.0%
CATTCATTGCAATTCTATGC+CGG - Chr1:77165723-77165742 None:intergenic 35.0%
CGAAGAAAATCAGATATCCA+GGG + Chr1:77166744-77166763 MsG0180004374.01.T01:intron 35.0%
CGGGATACAAATTTATTGCT+TGG - Chr1:77165122-77165141 None:intergenic 35.0%
CGTTTGTTTAAGTATGCAGT+GGG + Chr1:77168110-77168129 MsG0180004374.01.T01:intron 35.0%
CTAATCACCAGAATCAACAA+TGG - Chr1:77170910-77170929 None:intergenic 35.0%
CTAGAATCCTAACAACGTAA+TGG - Chr1:77174822-77174841 None:intergenic 35.0%
CTGAACACATAAACTCTTCA+AGG + Chr1:77172790-77172809 MsG0180004374.01.T01:intron 35.0%
CTTATCAATGGAAGATCAAC+TGG - Chr1:77171761-77171780 None:intergenic 35.0%
CTTCAACTAAGTCTCATGAA+GGG + Chr1:77173356-77173375 MsG0180004374.01.T01:CDS 35.0%
GAATGCAACCCAATAAGAAA+CGG + Chr1:77166856-77166875 MsG0180004374.01.T01:intron 35.0%
GACCTTTAACAGTGGTTATA+TGG + Chr1:77167447-77167466 MsG0180004374.01.T01:intron 35.0%
GACGTCATATTTATCATCCA+TGG - Chr1:77169907-77169926 None:intergenic 35.0%
GAGTCCTTCATTTCAATGTA+AGG - Chr1:77171599-77171618 None:intergenic 35.0%
GAGTGACATTACAGTGAATA+TGG + Chr1:77172563-77172582 MsG0180004374.01.T01:intron 35.0%
GATCATCTGTATCAATTGCA+GGG + Chr1:77169799-77169818 MsG0180004374.01.T01:CDS 35.0%
GATTCACTGTGAAAAAAACC+CGG + Chr1:77173674-77173693 MsG0180004374.01.T01:CDS 35.0%
GCAATTGATACAGATGATCT+TGG - Chr1:77169798-77169817 None:intergenic 35.0%
GCAGAAAAATGCAATCATTG+AGG - Chr1:77166806-77166825 None:intergenic 35.0%
GCTGAAAGATATCCATTCTT+TGG - Chr1:77166539-77166558 None:intergenic 35.0%
GGTAGCCTAAAATACAATAC+AGG - Chr1:77169123-77169142 None:intergenic 35.0%
GTACTTGAAATGACCAATAG+TGG - Chr1:77172977-77172996 None:intergenic 35.0%
GTAGAGGAACATTATCTTCA+CGG - Chr1:77165363-77165382 None:intergenic 35.0%
GTCAAATCCAGATTGTGAAT+GGG - Chr1:77174016-77174035 None:intergenic 35.0%
GTGAATTAGCACTTGCATTT+GGG + Chr1:77170217-77170236 MsG0180004374.01.T01:CDS 35.0%
GTTAAAAATTGGCTGCCAAA+AGG + Chr1:77170666-77170685 MsG0180004374.01.T01:intron 35.0%
GTTGGAAAAATCATATGGCT+CGG + Chr1:77171654-77171673 MsG0180004374.01.T01:CDS 35.0%
GTTGTGCAAACTATGCTATA+CGG - Chr1:77173049-77173068 None:intergenic 35.0%
TAAGGGATTAAAGGAGTGAA+AGG + Chr1:77166268-77166287 MsG0180004374.01.T01:intron 35.0%
TAGTCTTTATCCTCTTCCAA+TGG - Chr1:77167884-77167903 None:intergenic 35.0%
TATACGGCTATACCACATAT+AGG - Chr1:77173033-77173052 None:intergenic 35.0%
TATGCAATCAGCAACCATTA+CGG + Chr1:77174082-77174101 MsG0180004374.01.T01:CDS 35.0%
TATTCACTGTAATGTCACTC+AGG - Chr1:77172563-77172582 None:intergenic 35.0%
TCAAACATCAACGACAAAAC+TGG - Chr1:77165417-77165436 None:intergenic 35.0%
TCAAACATCTACAGCAAAAC+CGG - Chr1:77165254-77165273 None:intergenic 35.0%
TCAAATCCAGATTGTGAATG+GGG - Chr1:77174015-77174034 None:intergenic 35.0%
TCAGAATTATCAATTGGACC+GGG - Chr1:77167809-77167828 None:intergenic 35.0%
TCAGTCACCTTTAGATTAAG+TGG - Chr1:77168343-77168362 None:intergenic 35.0%
TCATCTTCCATTACGTTGTT+AGG + Chr1:77174812-77174831 MsG0180004374.01.T01:three_prime_UTR 35.0%
TCCCCCAATTACATAAAATG+TGG + Chr1:77174844-77174863 MsG0180004374.01.T01:three_prime_UTR 35.0%
TCTTCAACTAAGTCTCATGA+AGG + Chr1:77173355-77173374 MsG0180004374.01.T01:CDS 35.0%
TGAAAATGCTAATGACCAAC+AGG - Chr1:77170463-77170482 None:intergenic 35.0%
TGAACAAAAGAGACAGACAA+CGG - Chr1:77165862-77165881 None:intergenic 35.0%
TGAATTAGCACTTGCATTTG+GGG + Chr1:77170218-77170237 MsG0180004374.01.T01:CDS 35.0%
TGGTTATAACCACTGAATTG+TGG - Chr1:77170324-77170343 None:intergenic 35.0%
TTGAAGATAACTGATAGACC+CGG + Chr1:77167788-77167807 MsG0180004374.01.T01:CDS 35.0%
TTGACTAGCACATATGTGTA+AGG - Chr1:77168790-77168809 None:intergenic 35.0%
TTTGAGTCTCTTCTTTCTTC+TGG + Chr1:77166991-77167010 MsG0180004374.01.T01:intron 35.0%
! AAGTCACAGATAGAACCTTT+TGG - Chr1:77170684-77170703 None:intergenic 35.0%
! AATGGTTGCTGATTGCATAA+AGG - Chr1:77174081-77174100 None:intergenic 35.0%
! AGAAATATTGCATCGACATC+TGG + Chr1:77172431-77172450 MsG0180004374.01.T01:CDS 35.0%
! ATATTTTCCAAGTCCGACAT+TGG - Chr1:77171382-77171401 None:intergenic 35.0%
! ATTGATTGTTGATGAATGCC+AGG + Chr1:77171685-77171704 MsG0180004374.01.T01:CDS 35.0%
! CAAGTACTACTGAATTTTGC+AGG + Chr1:77172990-77173009 MsG0180004374.01.T01:intron 35.0%
! CCTGGATATCTGATTTTCTT+CGG - Chr1:77166746-77166765 None:intergenic 35.0%
! CGGAGCTTAATTTGAAAGAT+GGG + Chr1:77164808-77164827 MsG0180004374.01.T01:CDS 35.0%
! CTCTAGAAAACCTGTTCATT+TGG + Chr1:77174590-77174609 MsG0180004374.01.T01:three_prime_UTR 35.0%
! CTGGTAATTTTCTCCACTAT+TGG + Chr1:77172961-77172980 MsG0180004374.01.T01:intron 35.0%
! GGCTCATTTGTTCAAGTTTA+AGG + Chr1:77167469-77167488 MsG0180004374.01.T01:intron 35.0%
! TCACAAAATAGTTTGTGGCA+TGG + Chr1:77165697-77165716 MsG0180004374.01.T01:intron 35.0%
! TCGGAGCTTAATTTGAAAGA+TGG + Chr1:77164807-77164826 MsG0180004374.01.T01:CDS 35.0%
! TCGGATTTTCCGATTGATAA+TGG + Chr1:77164720-77164739 MsG0180004374.01.T01:CDS 35.0%
! TGGTGGTGTATCTATTTGTA+TGG + Chr1:77168481-77168500 MsG0180004374.01.T01:intron 35.0%
! TTAAACACCAACATTTTCCC+TGG - Chr1:77166764-77166783 None:intergenic 35.0%
!! AATCCAGTTTTGTGAACTTC+AGG - Chr1:77173658-77173677 None:intergenic 35.0%
!! AGAGATGATGGATGATAAAC+AGG + Chr1:77174868-77174887 MsG0180004374.01.T01:three_prime_UTR 35.0%
!! CAATCAGACATTGATAATGG+TGG + Chr1:77172753-77172772 MsG0180004374.01.T01:intron 35.0%
!! CATAGGTAATAAAAGCGCTA+GGG - Chr1:77170416-77170435 None:intergenic 35.0%
!! CGGATTTTCCGATTGATAAT+GGG + Chr1:77164721-77164740 MsG0180004374.01.T01:CDS 35.0%
!! GATTTTAAAAAGGGCTAGAC+AGG - Chr1:77165317-77165336 None:intergenic 35.0%
!! GTGGCAAGAGCTTTAAAAAT+TGG + Chr1:77170805-77170824 MsG0180004374.01.T01:intron 35.0%
!! TAGAAGGTATTCCATCACAA+TGG - Chr1:77167724-77167743 None:intergenic 35.0%
!! TCATAGGTAATAAAAGCGCT+AGG - Chr1:77170417-77170436 None:intergenic 35.0%
!! TGATTAGAAAAGGGTTTTGG+TGG + Chr1:77168464-77168483 MsG0180004374.01.T01:intron 35.0%
!! TTCAAGTTGGTACCTATATG+TGG + Chr1:77173018-77173037 MsG0180004374.01.T01:intron 35.0%
!! TTGGCTTTTCTACATGACTT+TGG + Chr1:77172248-77172267 MsG0180004374.01.T01:intron 35.0%
!! TTTTTGACCTGTTTCTCCAT+TGG + Chr1:77165904-77165923 MsG0180004374.01.T01:intron 35.0%
!!! ATTTTTTCTCCTGGTGTTCT+CGG + Chr1:77170114-77170133 MsG0180004374.01.T01:intron 35.0%
!!! GCGGCTCTTTTTTAAAAGAA+CGG - Chr1:77168074-77168093 None:intergenic 35.0%
!!! GGAATTGCTAGCCTTTTTAT+TGG + Chr1:77171535-77171554 MsG0180004374.01.T01:intron 35.0%
!!! GTTGATCATTTGTCGTTTTC+CGG + Chr1:77165551-77165570 MsG0180004374.01.T01:intron 35.0%
!!! TGAAATGCTTTTTCTTGCAG+AGG + Chr1:77172194-77172213 MsG0180004374.01.T01:intron 35.0%
!!! TTCTTTGTTTTCATGCTTGG+AGG + Chr1:77173708-77173727 MsG0180004374.01.T01:CDS 35.0%
!!! TTGCGTTGATGTTTTTGGAA+TGG + Chr1:77173777-77173796 MsG0180004374.01.T01:intron 35.0%
!!! TTGCTAGCCTTTTTATTGGA+TGG + Chr1:77171539-77171558 MsG0180004374.01.T01:CDS 35.0%
AAATCTCTACGAGAACTTCG+GGG + Chr1:77168857-77168876 MsG0180004374.01.T01:intron 40.0%
AACAAAAGAGACAGACAACG+GGG - Chr1:77165860-77165879 None:intergenic 40.0%
AACCTAGAAAATGCGTTAGC+AGG + Chr1:77166099-77166118 MsG0180004374.01.T01:intron 40.0%
AACGATGACGATTGCTGAAT+CGG + Chr1:77164701-77164720 MsG0180004374.01.T01:exon 40.0%
AACTAAGTCTCATGAAGGGA+AGG + Chr1:77173360-77173379 MsG0180004374.01.T01:CDS 40.0%
AAGAGACTCAAAAGAGGTTC+AGG - Chr1:77166983-77167002 None:intergenic 40.0%
AATGATCGTCAACTCACCTA+AGG - Chr1:77165222-77165241 None:intergenic 40.0%
AATGTCTGGTCGTGAAAACA+CGG + Chr1:77165739-77165758 MsG0180004374.01.T01:intron 40.0%
ACCAATACTCCCAAATGAAC+AGG - Chr1:77174603-77174622 None:intergenic 40.0%
ACTGAATTGTGGAGCAAATC+GGG - Chr1:77170313-77170332 None:intergenic 40.0%
ACTTGAGTGACCATTAGACA+AGG - Chr1:77169832-77169851 None:intergenic 40.0%
AGAGACTCAAAAGAGGTTCA+GGG - Chr1:77166982-77167001 None:intergenic 40.0%
AGAGATCTTAGCCAAGCATT+GGG + Chr1:77172147-77172166 MsG0180004374.01.T01:intron 40.0%
AGATCACAACTGATGAACGT+AGG - Chr1:77171075-77171094 None:intergenic 40.0%
AGCTCAATTGGTTGAGCTAA+GGG + Chr1:77166251-77166270 MsG0180004374.01.T01:intron 40.0%
AGGCTTCTGCTTCATTAAGT+TGG - Chr1:77168190-77168209 None:intergenic 40.0%
AGTTTGCATTAGGCCAATGT+CGG + Chr1:77171366-77171385 MsG0180004374.01.T01:intron 40.0%
ATATCCACTTTGTAGGCTCA+AGG - Chr1:77169479-77169498 None:intergenic 40.0%
ATCACAGATGCCTTGTCAAT+GGG - Chr1:77173550-77173569 None:intergenic 40.0%
ATCACGTTGACCTTTAACAG+TGG + Chr1:77167439-77167458 MsG0180004374.01.T01:intron 40.0%
ATTCAGAGTTACTCACGTCT+TGG - Chr1:77169388-77169407 None:intergenic 40.0%
ATTGAAATGAAGGACTCGGA+TGG + Chr1:77171602-77171621 MsG0180004374.01.T01:CDS 40.0%
CAAAGAAATAGCTTCTTGCC+GGG - Chr1:77173695-77173714 None:intergenic 40.0%
CAACATTTCTCTGATCTGCA+GGG + Chr1:77170195-77170214 MsG0180004374.01.T01:intron 40.0%
CAACTTGAAAACCATCTGCA+TGG - Chr1:77167686-77167705 None:intergenic 40.0%
CAATCTTACCACATGTCATC+TGG - Chr1:77173760-77173779 None:intergenic 40.0%
CAATTGTCTAGGTACAAAGG+TGG + Chr1:77168253-77168272 MsG0180004374.01.T01:intron 40.0%
CACAAAGCTCTGTTGAGTAA+TGG + Chr1:77172501-77172520 MsG0180004374.01.T01:intron 40.0%
CACTGAATTGTGGAGCAAAT+CGG - Chr1:77170314-77170333 None:intergenic 40.0%
CAGAAAACTGATGGGAGTTA+TGG - Chr1:77172936-77172955 None:intergenic 40.0%
CAGATATCCAGGGAAAATGT+TGG + Chr1:77166754-77166773 MsG0180004374.01.T01:intron 40.0%
CAGTGGTCCAAAAATGTTGT+TGG + Chr1:77166566-77166585 MsG0180004374.01.T01:intron 40.0%
CATTCTGGTGTGCATTCAAT+GGG + Chr1:77169741-77169760 MsG0180004374.01.T01:CDS 40.0%
CCAGACAATCAGAAAACTGA+TGG - Chr1:77172945-77172964 None:intergenic 40.0%
CCGAAGAAAATCAGATATCC+AGG + Chr1:77166743-77166762 MsG0180004374.01.T01:intron 40.0%
CCTACTTGAAAGCAATTGAC+TGG + Chr1:77172658-77172677 MsG0180004374.01.T01:intron 40.0%
CCTTGAAAGTAAAGCCATTG+TGG - Chr1:77170159-77170178 None:intergenic 40.0%
CTAACCCTAGATAGATTGAG+GGG - Chr1:77164477-77164496 None:intergenic 40.0%
CTAATTCTCACAGTGAACTG+AGG + Chr1:77173428-77173447 MsG0180004374.01.T01:CDS 40.0%
CTCGAGTCTTGACAACTTTA+TGG + Chr1:77171422-77171441 MsG0180004374.01.T01:intron 40.0%
CTTCATGTTCACTGAACAGT+GGG + Chr1:77173209-77173228 MsG0180004374.01.T01:intron 40.0%
CTTCATTCCAATGGAGAAAC+AGG - Chr1:77165914-77165933 None:intergenic 40.0%
CTTCCTGAAGTTCACAAAAC+TGG + Chr1:77173652-77173671 MsG0180004374.01.T01:CDS 40.0%
GAACAAAAGAGACAGACAAC+GGG - Chr1:77165861-77165880 None:intergenic 40.0%
GAACAAAGAGTCATTGCTGA+CGG + Chr1:77169322-77169341 MsG0180004374.01.T01:CDS 40.0%
GAACTCTTCCAGAGTACAAA+TGG + Chr1:77172722-77172741 MsG0180004374.01.T01:intron 40.0%
GAATAGCGCTCTACAATGTT+TGG + Chr1:77169986-77170005 MsG0180004374.01.T01:CDS 40.0%
GAATGGATATCTTTCAGCAG+AGG + Chr1:77166541-77166560 MsG0180004374.01.T01:intron 40.0%
GACAGTAATTGTCATTGTCC+GGG - Chr1:77172061-77172080 None:intergenic 40.0%
GAGCTAGTGTGCAAAGTTAA+AGG + Chr1:77169158-77169177 MsG0180004374.01.T01:CDS 40.0%
GCATTACACTGCATATGCTA+AGG + Chr1:77174120-77174139 MsG0180004374.01.T01:CDS 40.0%
GCCAGTATGTTATACCTGTA+TGG + Chr1:77171049-77171068 MsG0180004374.01.T01:intron 40.0%
GCCATACAGGTATAACATAC+TGG - Chr1:77171053-77171072 None:intergenic 40.0%
GCCCATATAACCACTGTTAA+AGG - Chr1:77167452-77167471 None:intergenic 40.0%
GGACATAAACGTCCTTCTAA+TGG - Chr1:77169528-77169547 None:intergenic 40.0%
GGTCAAATCCAGATTGTGAA+TGG - Chr1:77174017-77174036 None:intergenic 40.0%
GGTGAATTAGCACTTGCATT+TGG + Chr1:77170216-77170235 MsG0180004374.01.T01:CDS 40.0%
GGTGTACCCACTTAATCTAA+AGG + Chr1:77168333-77168352 MsG0180004374.01.T01:CDS 40.0%
GTAGCTACTCAGCTTATCAA+TGG - Chr1:77171773-77171792 None:intergenic 40.0%
GTGCACGTGCAAATGTATAT+TGG + Chr1:77168761-77168780 MsG0180004374.01.T01:intron 40.0%
TAAAGGAGTAGAACAGCACA+AGG + Chr1:77169175-77169194 MsG0180004374.01.T01:CDS 40.0%
TAACCCTAGATAGATTGAGG+GGG - Chr1:77164476-77164495 None:intergenic 40.0%
TAATTATGATGCAGAGGCTG+AGG - Chr1:77166051-77166070 None:intergenic 40.0%
TAGCTCAATTGGTTGAGCTA+AGG + Chr1:77166250-77166269 MsG0180004374.01.T01:intron 40.0%
TAGCTCATAGAGTTCACTCA+AGG - Chr1:77169144-77169163 None:intergenic 40.0%
TATCACAGATGCCTTGTCAA+TGG - Chr1:77173551-77173570 None:intergenic 40.0%
TATGTTGATGCATCAGCGTT+CGG - Chr1:77166504-77166523 None:intergenic 40.0%
TATTCATCGACCATTGGAAG+AGG + Chr1:77167871-77167890 MsG0180004374.01.T01:CDS 40.0%
TCAACATTTCTCTGATCTGC+AGG + Chr1:77170194-77170213 MsG0180004374.01.T01:intron 40.0%
TCATATGCTGAAAGGCAATC+CGG + Chr1:77174465-77174484 MsG0180004374.01.T01:three_prime_UTR 40.0%
TCATCTGTATCAATTGCAGG+GGG + Chr1:77169801-77169820 MsG0180004374.01.T01:CDS 40.0%
TCATTCTGGTGTGCATTCAA+TGG + Chr1:77169740-77169759 MsG0180004374.01.T01:CDS 40.0%
TCTTCATGTTCACTGAACAG+TGG + Chr1:77173208-77173227 MsG0180004374.01.T01:intron 40.0%
TGCCCAGAACAAATAACACA+AGG - Chr1:77174269-77174288 None:intergenic 40.0%
TGGTTGAGCTAAGGGATTAA+AGG + Chr1:77166259-77166278 MsG0180004374.01.T01:intron 40.0%
TGTCTAATGGTCACTCAAGT+GGG + Chr1:77169832-77169851 MsG0180004374.01.T01:CDS 40.0%
TTACAGCGATGAGATCAACA+TGG + Chr1:77170046-77170065 MsG0180004374.01.T01:CDS 40.0%
TTCCTCAACAAGTATGGGAA+AGG + Chr1:77167912-77167931 MsG0180004374.01.T01:CDS 40.0%
TTGGAAAGATGAATCTCCAC+AGG - Chr1:77173491-77173510 None:intergenic 40.0%
TTGGAAGAAGACCCTCAATA+TGG + Chr1:77173277-77173296 MsG0180004374.01.T01:CDS 40.0%
TTGTCTAATGGTCACTCAAG+TGG + Chr1:77169831-77169850 MsG0180004374.01.T01:CDS 40.0%
TTTCCACAAGTCCAGTTTCT+TGG - Chr1:77173909-77173928 None:intergenic 40.0%
TTTGCAGGTACCATTCAAGT+TGG + Chr1:77173005-77173024 MsG0180004374.01.T01:intron 40.0%
! AAAATAGTTTGTGGCATGGC+CGG + Chr1:77165701-77165720 MsG0180004374.01.T01:intron 40.0%
! AAGGAAACTGGTTTCATCTC+AGG + Chr1:77173379-77173398 MsG0180004374.01.T01:CDS 40.0%
! AAGTTCATCACTGACTACCA+TGG + Chr1:77169887-77169906 MsG0180004374.01.T01:CDS 40.0%
! ACACTAGTTTGTCCTGAATG+TGG + Chr1:77171973-77171992 MsG0180004374.01.T01:intron 40.0%
! ACCTGTTCATTTGGGAGTAT+TGG + Chr1:77174599-77174618 MsG0180004374.01.T01:three_prime_UTR 40.0%
! ATAGCATAGTTTGCACAACC+TGG + Chr1:77173050-77173069 MsG0180004374.01.T01:intron 40.0%
! ATCCTGCTAACGCATTTTCT+AGG - Chr1:77166104-77166123 None:intergenic 40.0%
! ATCCTTTAGGAATGCGTGTA+TGG + Chr1:77170072-77170091 MsG0180004374.01.T01:intron 40.0%
! CCAAGGAAGTTGATTTCTCA+GGG + Chr1:77168286-77168305 MsG0180004374.01.T01:CDS 40.0%
! CCACAATGGCTTTACTTTCA+AGG + Chr1:77170156-77170175 MsG0180004374.01.T01:intron 40.0%
! CCAGTCAATTGCTTTCAAGT+AGG - Chr1:77172661-77172680 None:intergenic 40.0%
! CCATCAGTTTTCTGATTGTC+TGG + Chr1:77172942-77172961 MsG0180004374.01.T01:intron 40.0%
! CTTTTCTGTAAGTACTCACC+TGG - Chr1:77171706-77171725 None:intergenic 40.0%
! GACTGGAGACTGTGATATTT+TGG + Chr1:77172675-77172694 MsG0180004374.01.T01:intron 40.0%
! GATGATCTTGGAGGTTCTAA+TGG - Chr1:77169786-77169805 None:intergenic 40.0%
! GATTTTTCATGTTCGCTGTG+TGG + Chr1:77174177-77174196 MsG0180004374.01.T01:intron 40.0%
! GCTAACGCATTTTCTAGGTT+GGG - Chr1:77166099-77166118 None:intergenic 40.0%
! GGAGTTATGGTCTAGTGTTT+TGG - Chr1:77172923-77172942 None:intergenic 40.0%
! GGTTCCTGAAACTTAGTTTG+TGG - Chr1:77168169-77168188 None:intergenic 40.0%
! GTCTTTTATTCTGATGGGAG+CGG + Chr1:77172078-77172097 MsG0180004374.01.T01:intron 40.0%
! GTGGAAATTGCCAGAGATTT+TGG + Chr1:77173922-77173941 MsG0180004374.01.T01:CDS 40.0%
! TAGAGCGCTATTCATAAAGC+AGG - Chr1:77169979-77169998 None:intergenic 40.0%
! TGCTAACGCATTTTCTAGGT+TGG - Chr1:77166100-77166119 None:intergenic 40.0%
! TGTACTCTGGAAGAGTTCAA+TGG - Chr1:77172720-77172739 None:intergenic 40.0%
! TTAGCATTTTCTCCCTTTCG+AGG - Chr1:77166308-77166327 None:intergenic 40.0%
! TTGCAGTCTAGAACTTGGTT+AGG + Chr1:77174667-77174686 MsG0180004374.01.T01:three_prime_UTR 40.0%
!! CAATGTTGGCTCCATATTGA+GGG - Chr1:77173291-77173310 None:intergenic 40.0%
!! CGAGGTGCTGAATATTCTTA+TGG + Chr1:77169581-77169600 MsG0180004374.01.T01:intron 40.0%
!! TCAATGTTGGCTCCATATTG+AGG - Chr1:77173292-77173311 None:intergenic 40.0%
!! TTCTGAAGCAATGTACTGCA+CGG + Chr1:77166708-77166727 MsG0180004374.01.T01:intron 40.0%
!! TTTGTGTCCATAGTACTGAC+AGG + Chr1:77167014-77167033 MsG0180004374.01.T01:intron 40.0%
!!! CATGCAGATGGTTTTCAAGT+TGG + Chr1:77167684-77167703 MsG0180004374.01.T01:intron 40.0%
!!! GACGATCATTTGTCGTTTTC+CGG + Chr1:77165232-77165251 MsG0180004374.01.T01:intron 40.0%
AAATGAAGGACTCGGATGGT+AGG + Chr1:77171606-77171625 MsG0180004374.01.T01:CDS 45.0%
AACAGCGTTGTTCAAGACAG+AGG + Chr1:77166628-77166647 MsG0180004374.01.T01:intron 45.0%
AACCATTACGGTGGTTTAGG+TGG + Chr1:77174094-77174113 MsG0180004374.01.T01:CDS 45.0%
AAGGATCAACAACTCATCGC+AGG - Chr1:77165385-77165404 None:intergenic 45.0%
ACAAGTATGGGAAAGGCTGT+TGG + Chr1:77167919-77167938 MsG0180004374.01.T01:CDS 45.0%
ACACAGAGACACATCTTCTG+TGG + Chr1:77167104-77167123 MsG0180004374.01.T01:intron 45.0%
ACATCCATATCTCACTAGGC+GGG - Chr1:77172891-77172910 None:intergenic 45.0%
ACCTCAATGCTGTACTGCTT+CGG - Chr1:77168316-77168335 None:intergenic 45.0%
ACTGACCAGCAATCTTCTGA+TGG + Chr1:77167743-77167762 MsG0180004374.01.T01:CDS 45.0%
ACTTTGCACCAGAGAACAAG+AGG + Chr1:77173459-77173478 MsG0180004374.01.T01:CDS 45.0%
AGCAACCATTACGGTGGTTT+AGG + Chr1:77174091-77174110 MsG0180004374.01.T01:CDS 45.0%
AGCTCTTGCCACTGTAAAAC+TGG - Chr1:77170797-77170816 None:intergenic 45.0%
AGGAAGTCGCAAATGAGTGT+TGG + Chr1:77171636-77171655 MsG0180004374.01.T01:CDS 45.0%
AGGTATGTTGGCCATTGTGA+TGG + Chr1:77167710-77167729 MsG0180004374.01.T01:CDS 45.0%
AGTTTGCATCCTCCAATGTC+TGG - Chr1:77169355-77169374 None:intergenic 45.0%
ATCAACTTCCTTGGCAATGC+TGG - Chr1:77168280-77168299 None:intergenic 45.0%
ATCTGGTCCTAGAGGTTCTT+CGG - Chr1:77173743-77173762 None:intergenic 45.0%
ATGTTCACTGAACAGTGGGA+AGG + Chr1:77173213-77173232 MsG0180004374.01.T01:intron 45.0%
ATTACGGTGGTTTAGGTGGT+GGG + Chr1:77174098-77174117 MsG0180004374.01.T01:CDS 45.0%
CAAGTATGGGAAAGGCTGTT+GGG + Chr1:77167920-77167939 MsG0180004374.01.T01:CDS 45.0%
CACATCCATATCTCACTAGG+CGG - Chr1:77172892-77172911 None:intergenic 45.0%
CAGACAAGCTACCAAGAAAC+TGG + Chr1:77173895-77173914 MsG0180004374.01.T01:CDS 45.0%
CAGAGATCTTAGCCAAGCAT+TGG + Chr1:77172146-77172165 MsG0180004374.01.T01:intron 45.0%
CAGGTTGTTTGTTTGATGCC+TGG + Chr1:77174441-77174460 MsG0180004374.01.T01:three_prime_UTR 45.0%
CCCTGAGAAATCAACTTCCT+TGG - Chr1:77168289-77168308 None:intergenic 45.0%
CCTTTCGAGGATTCGAACTA+CGG - Chr1:77166295-77166314 None:intergenic 45.0%
CGTAGTTCGAATCCTCGAAA+GGG + Chr1:77166293-77166312 MsG0180004374.01.T01:intron 45.0%
CGTGAATTGCAGGGAAATGA+TGG + Chr1:77165797-77165816 MsG0180004374.01.T01:intron 45.0%
CGTGTATGGACCATTTCTGT+TGG + Chr1:77170086-77170105 MsG0180004374.01.T01:intron 45.0%
CTACCAAGAAACTGGACTTG+TGG + Chr1:77173903-77173922 MsG0180004374.01.T01:CDS 45.0%
CTCTGTCGCATCACATGATA+GGG - Chr1:77166901-77166920 None:intergenic 45.0%
CTGGTTGTGGAATCGTTCAA+TGG - Chr1:77173095-77173114 None:intergenic 45.0%
CTTCCCCCTCAATCTATCTA+GGG + Chr1:77164470-77164489 MsG0180004374.01.T01:five_prime_UTR 45.0%
CTTTGCACCAGAGAACAAGA+GGG + Chr1:77173460-77173479 MsG0180004374.01.T01:CDS 45.0%
GAACTTCCCCATTCACAATC+TGG + Chr1:77174006-77174025 MsG0180004374.01.T01:CDS 45.0%
GAAGATTGCTGGTCAGTAGA+AGG - Chr1:77167740-77167759 None:intergenic 45.0%
GACATTGGAGGATGCAAACT+TGG + Chr1:77169355-77169374 MsG0180004374.01.T01:CDS 45.0%
GACGTCTATAGTGGTGAAAG+AGG + Chr1:77169921-77169940 MsG0180004374.01.T01:CDS 45.0%
GACTGTCATCTTGAGCAAGA+TGG + Chr1:77166832-77166851 MsG0180004374.01.T01:intron 45.0%
GAGACTCAAAAGAGGTTCAG+GGG - Chr1:77166981-77167000 None:intergenic 45.0%
GAGTGACCATTAGACAAGGT+AGG - Chr1:77169828-77169847 None:intergenic 45.0%
GCAAAGTAAAACGGCTATCC+AGG - Chr1:77174500-77174519 None:intergenic 45.0%
GGCTAGACAGGCTATTAATC+GGG - Chr1:77165305-77165324 None:intergenic 45.0%
GGGCTAGACAGGCTATTAAT+CGG - Chr1:77165306-77165325 None:intergenic 45.0%
GGTCCAAAAATGTTGTTGGC+CGG + Chr1:77166570-77166589 MsG0180004374.01.T01:intron 45.0%
GTAGGATTGCAGATAGCGAA+TGG - Chr1:77167245-77167264 None:intergenic 45.0%
GTCCATACACGCATTCCTAA+AGG - Chr1:77170077-77170096 None:intergenic 45.0%
GTCTATAGTGGTGAAAGAGG+TGG + Chr1:77169924-77169943 MsG0180004374.01.T01:CDS 45.0%
GTCTGTGTTCCTTGCATTGA+GGG - Chr1:77173880-77173899 None:intergenic 45.0%
GTGAATGGGGAAGTTCACAA+AGG - Chr1:77174002-77174021 None:intergenic 45.0%
GTGTGACTGATCAAGGAAGA+AGG + Chr1:77166666-77166685 MsG0180004374.01.T01:intron 45.0%
TAGACAGGCTATTAATCGGG+AGG - Chr1:77165302-77165321 None:intergenic 45.0%
TCATTTGCGACTTCCTCATC+CGG - Chr1:77171632-77171651 None:intergenic 45.0%
TCCTTGTCGATATAGGAGCA+TGG + Chr1:77166219-77166238 MsG0180004374.01.T01:intron 45.0%
TCTCATGAAGGGAAGGAAAC+TGG + Chr1:77173367-77173386 MsG0180004374.01.T01:CDS 45.0%
TCTCTGTCGCATCACATGAT+AGG - Chr1:77166902-77166921 None:intergenic 45.0%
TCTGTCGCATCACATGATAG+GGG - Chr1:77166900-77166919 None:intergenic 45.0%
TGAATGCACACCAGAATGAG+AGG - Chr1:77169739-77169758 None:intergenic 45.0%
TGACGTGACTGTCATCGAAA+TGG - Chr1:77174316-77174335 None:intergenic 45.0%
TGAGGAAACTTTGGTCCTCT+GGG + Chr1:77170247-77170266 MsG0180004374.01.T01:CDS 45.0%
TGCAATCATTGAGGCTGCTA+TGG - Chr1:77166797-77166816 None:intergenic 45.0%
TGCCTGGTTCATATGCTGAA+AGG + Chr1:77174457-77174476 MsG0180004374.01.T01:three_prime_UTR 45.0%
TGCCTTTCAGCATATGAACC+AGG - Chr1:77174462-77174481 None:intergenic 45.0%
TGTATGGAGCATGCTCTGTA+TGG + Chr1:77168497-77168516 MsG0180004374.01.T01:intron 45.0%
TGTCTGTGTTCCTTGCATTG+AGG - Chr1:77173881-77173900 None:intergenic 45.0%
TGTGTGTGTGTGACTGATCA+AGG + Chr1:77166659-77166678 MsG0180004374.01.T01:intron 45.0%
TGTTCACTGAACAGTGGGAA+GGG + Chr1:77173214-77173233 MsG0180004374.01.T01:intron 45.0%
TTAGCAGGACTGCAGAACTT+GGG + Chr1:77169948-77169967 MsG0180004374.01.T01:CDS 45.0%
TTCAGCACAGTCACAGTGTA+CGG - Chr1:77172114-77172133 None:intergenic 45.0%
TTCTCTTCCTCCGGTGAAAT+CGG - Chr1:77164759-77164778 None:intergenic 45.0%
TTCTTGACCGAAGAACCTCT+AGG + Chr1:77173733-77173752 MsG0180004374.01.T01:CDS 45.0%
TTGAAAACCATCTGCATGGG+TGG - Chr1:77167682-77167701 None:intergenic 45.0%
TTGAGGAAACTTTGGTCCTC+TGG + Chr1:77170246-77170265 MsG0180004374.01.T01:CDS 45.0%
TTTAGCAGGACTGCAGAACT+TGG + Chr1:77169947-77169966 MsG0180004374.01.T01:CDS 45.0%
TTTCACCGGAGGAAGAGAAA+CGG + Chr1:77164760-77164779 MsG0180004374.01.T01:CDS 45.0%
TTTGCACCAGAGAACAAGAG+GGG + Chr1:77173461-77173480 MsG0180004374.01.T01:CDS 45.0%
! AGCCTTTCCCATACTTGTTG+AGG - Chr1:77167917-77167936 None:intergenic 45.0%
! ATCCATTCTTTGGCTGGTCA+TGG - Chr1:77166529-77166548 None:intergenic 45.0%
! CCTTGTCGATATAGGAGCAT+GGG + Chr1:77166220-77166239 MsG0180004374.01.T01:intron 45.0%
! CGATTTGCTCCACAATTCAG+TGG + Chr1:77170312-77170331 MsG0180004374.01.T01:CDS 45.0%
! CTTGTCGATATAGGAGCATG+GGG + Chr1:77166221-77166240 MsG0180004374.01.T01:intron 45.0%
! GAAACTGGTTTCATCTCAGG+TGG + Chr1:77173382-77173401 MsG0180004374.01.T01:CDS 45.0%
! GCAAGCTAGTGGATCATTCT+TGG - Chr1:77165962-77165981 None:intergenic 45.0%
! GCCAAGGAAGTTGATTTCTC+AGG + Chr1:77168285-77168304 MsG0180004374.01.T01:CDS 45.0%
! GGGCTGGCAAAAAATTGTGT+TGG - Chr1:77166961-77166980 None:intergenic 45.0%
! GGTCAGCTACTTTGCTATGT+GGG + Chr1:77167279-77167298 MsG0180004374.01.T01:intron 45.0%
! GTTGGGTTCCAGTTTTACAG+TGG + Chr1:77170786-77170805 MsG0180004374.01.T01:intron 45.0%
! TCTCCGGCCAACAACATTTT+TGG - Chr1:77166576-77166595 None:intergenic 45.0%
! TTAGGGCTGGTACACAATGT+CGG - Chr1:77165626-77165645 None:intergenic 45.0%
! TTGTCGATATAGGAGCATGG+GGG + Chr1:77166222-77166241 MsG0180004374.01.T01:intron 45.0%
!! AATGAACAGTATCGGCATGC+AGG - Chr1:77167769-77167788 None:intergenic 45.0%
!! GAAGATCTTTGGAACTCCCT+TGG + Chr1:77173246-77173265 MsG0180004374.01.T01:CDS 45.0%
!! GAGTGTCTTTAAGTTGAGCG+AGG + Chr1:77169563-77169582 MsG0180004374.01.T01:intron 45.0%
!! GGGAAATGATGGACTAATCG+AGG + Chr1:77165808-77165827 MsG0180004374.01.T01:intron 45.0%
!! GGGACTTGTTGAGGAAACTT+TGG + Chr1:77170238-77170257 MsG0180004374.01.T01:CDS 45.0%
!! TCAAGTTGGCAGAGGTATGT+TGG + Chr1:77167698-77167717 MsG0180004374.01.T01:CDS 45.0%
!! TTGCATTTGGGGACTTGTTG+AGG + Chr1:77170229-77170248 MsG0180004374.01.T01:CDS 45.0%
!!! GATGGTTTTCAAGTTGGCAG+AGG + Chr1:77167690-77167709 MsG0180004374.01.T01:intron 45.0%
!!! AATTCAATTTTAAATTTTTA+TGG - Chr1:77168731-77168750 None:intergenic 5.0%
AAGACGTCGCTTCTTCCATC+TGG - Chr1:77174412-77174431 None:intergenic 50.0%
AATGCATCACCTGCTGGAGA+TGG - Chr1:77166006-77166025 None:intergenic 50.0%
AATGGTCACTCAAGTGGGTC+TGG + Chr1:77169837-77169856 MsG0180004374.01.T01:CDS 50.0%
ACAGTCACAGTGTACGGCAT+GGG - Chr1:77172108-77172127 None:intergenic 50.0%
ACCGAAGCAGTACAGCATTG+AGG + Chr1:77168312-77168331 MsG0180004374.01.T01:CDS 50.0%
ACGATCCGTTTCTCTTCCTC+CGG - Chr1:77164768-77164787 None:intergenic 50.0%
ACTGTGACTGTGCTGAAGCA+TGG + Chr1:77172117-77172136 MsG0180004374.01.T01:intron 50.0%
AGGAGTAGAACAGCACAAGG+TGG + Chr1:77169178-77169197 MsG0180004374.01.T01:CDS 50.0%
ATCTTTCAGCAGAGGGTCAG+TGG + Chr1:77166549-77166568 MsG0180004374.01.T01:intron 50.0%
ATGCATCACCTGCTGGAGAT+GGG - Chr1:77166005-77166024 None:intergenic 50.0%
CAACAACTCATCGCAGGTAG+AGG - Chr1:77165379-77165398 None:intergenic 50.0%
CACATGTCATCTGGTCCTAG+AGG - Chr1:77173751-77173770 None:intergenic 50.0%
CACCACCTAAACCACCGTAA+TGG - Chr1:77174099-77174118 None:intergenic 50.0%
CAGAGGCTGAGGTATACCAA+GGG - Chr1:77166040-77166059 None:intergenic 50.0%
CATCCATATCTCACTAGGCG+GGG - Chr1:77172890-77172909 None:intergenic 50.0%
CATTACGGTGGTTTAGGTGG+TGG + Chr1:77174097-77174116 MsG0180004374.01.T01:CDS 50.0%
CATTAGGCCAATGTCGGACT+TGG + Chr1:77171372-77171391 MsG0180004374.01.T01:intron 50.0%
CCCATGCTCCTATATCGACA+AGG - Chr1:77166223-77166242 None:intergenic 50.0%
CCGTAGTTCGAATCCTCGAA+AGG + Chr1:77166292-77166311 MsG0180004374.01.T01:intron 50.0%
CCTAGATAGATTGAGGGGGA+AGG - Chr1:77164472-77164491 None:intergenic 50.0%
CCTTCCCCCTCAATCTATCT+AGG + Chr1:77164469-77164488 MsG0180004374.01.T01:five_prime_UTR 50.0%
CTACGAGAACTTCGGGGTTT+GGG + Chr1:77168863-77168882 MsG0180004374.01.T01:intron 50.0%
CTGATGAACGTAGGCCATAC+AGG - Chr1:77171066-77171085 None:intergenic 50.0%
CTGTGGCTCTTTCGAAGAGA+AGG + Chr1:77167121-77167140 MsG0180004374.01.T01:intron 50.0%
CTTATGCATCCGAGAACACC+AGG - Chr1:77170126-77170145 None:intergenic 50.0%
GACCATGACCAGCCAAAGAA+TGG + Chr1:77166524-77166543 MsG0180004374.01.T01:intron 50.0%
GATGGAAGAAGCGACGTCTT+AGG + Chr1:77174412-77174431 MsG0180004374.01.T01:CDS 50.0%
GCAATCAGCAACCATTACGG+TGG + Chr1:77174085-77174104 MsG0180004374.01.T01:CDS 50.0%
GCATTTCCTGGCTAATCCCT+TGG + Chr1:77166021-77166040 MsG0180004374.01.T01:intron 50.0%
GCTATCCAGGACTTAAGCTC+CGG - Chr1:77174487-77174506 None:intergenic 50.0%
GCTGATCGTTCCTCTCATTC+TGG + Chr1:77169726-77169745 MsG0180004374.01.T01:CDS 50.0%
GGAAGAGAAACGGATCGTGA+AGG + Chr1:77164770-77164789 MsG0180004374.01.T01:CDS 50.0%
GGAGGATGCAAACTTGGCAA+TGG + Chr1:77169361-77169380 MsG0180004374.01.T01:CDS 50.0%
GGTGAAAGAGGTGGTTTAGC+AGG + Chr1:77169933-77169952 MsG0180004374.01.T01:CDS 50.0%
GGTGGAGAGAGGAAGATCTT+TGG + Chr1:77173235-77173254 MsG0180004374.01.T01:CDS 50.0%
TAGCAGGACTGCAGAACTTG+GGG + Chr1:77169949-77169968 MsG0180004374.01.T01:CDS 50.0%
TAGCTGTGAGCCCATTGACA+AGG + Chr1:77173537-77173556 MsG0180004374.01.T01:CDS 50.0%
TATGGGAAAGGCTGTTGGGA+TGG + Chr1:77167924-77167943 MsG0180004374.01.T01:CDS 50.0%
TCACAGTGAACTGAGGAACC+CGG + Chr1:77173435-77173454 MsG0180004374.01.T01:CDS 50.0%
TCCTGTTACACGATGCCTGT+TGG + Chr1:77170445-77170464 MsG0180004374.01.T01:intron 50.0%
TCTACGAGAACTTCGGGGTT+TGG + Chr1:77168862-77168881 MsG0180004374.01.T01:intron 50.0%
TGAGGCTGCTATGGTGAACA+GGG - Chr1:77166788-77166807 None:intergenic 50.0%
TGGACTAATCGAGGCCAACA+CGG + Chr1:77165817-77165836 MsG0180004374.01.T01:intron 50.0%
TGGAGCATGCTCTGTATGGT+TGG + Chr1:77168501-77168520 MsG0180004374.01.T01:intron 50.0%
TGTTCTCTGGTGCAAAGTGC+CGG - Chr1:77173457-77173476 None:intergenic 50.0%
TGTTGGCCGGAGAAGATGAT+GGG + Chr1:77166583-77166602 MsG0180004374.01.T01:intron 50.0%
TTGAGGCTGCTATGGTGAAC+AGG - Chr1:77166789-77166808 None:intergenic 50.0%
TTGCTTACCACCCATGCAGA+TGG + Chr1:77167672-77167691 MsG0180004374.01.T01:intron 50.0%
TTGTTGGCCGGAGAAGATGA+TGG + Chr1:77166582-77166601 MsG0180004374.01.T01:intron 50.0%
! ACCAACAGGCATCGTGTAAC+AGG - Chr1:77170449-77170468 None:intergenic 50.0%
! ATTCAGCAAGTGGTGGAGTG+TGG - Chr1:77170013-77170032 None:intergenic 50.0%
! CTAGACTAGCCGTTTATCGG+AGG - Chr1:77165465-77165484 None:intergenic 50.0%
! GATATAGGAGCATGGGGGAT+GGG + Chr1:77166227-77166246 MsG0180004374.01.T01:intron 50.0%
! GGGCTAGACTAGCCGTTTAT+CGG - Chr1:77165468-77165487 None:intergenic 50.0%
! GGGTCAGCTACTTTGCTATG+TGG + Chr1:77167278-77167297 MsG0180004374.01.T01:intron 50.0%
! TAGGTACTGCCCTCAATGCA+AGG + Chr1:77173868-77173887 MsG0180004374.01.T01:intron 50.0%
!! CTCTAGGACCAGATGACATG+TGG + Chr1:77173749-77173768 MsG0180004374.01.T01:CDS 50.0%
!! GAGTTGTGTGCCGATTTCAC+CGG + Chr1:77164746-77164765 MsG0180004374.01.T01:CDS 50.0%
!! GGTATACCAAGGGATTAGCC+AGG - Chr1:77166030-77166049 None:intergenic 50.0%
AAGGTGGACCAGCATTGCCA+AGG + Chr1:77168269-77168288 MsG0180004374.01.T01:CDS 55.0%
ACGATGGCAGCGTGAATTGC+AGG + Chr1:77165787-77165806 MsG0180004374.01.T01:intron 55.0%
ACGTGCGTTCAAGGGAAAGC+TGG + Chr1:77170287-77170306 MsG0180004374.01.T01:CDS 55.0%
AGCATGCAGTGCCCAATGCT+TGG - Chr1:77172161-77172180 None:intergenic 55.0%
AGCTTTCCCTTGAACGCACG+TGG - Chr1:77170288-77170307 None:intergenic 55.0%
AGTTGGAAGCGACGTCCAGA+TGG + Chr1:77174394-77174413 MsG0180004374.01.T01:CDS 55.0%
ATTGTCCGGGTGACAGTGGA+AGG - Chr1:77172048-77172067 None:intergenic 55.0%
CACAGTCACAGTGTACGGCA+TGG - Chr1:77172109-77172128 None:intergenic 55.0%
CACTTCCTTCCACTGTCACC+CGG + Chr1:77172040-77172059 MsG0180004374.01.T01:intron 55.0%
CATATCTCACTAGGCGGGGT+CGG - Chr1:77172886-77172905 None:intergenic 55.0%
CCAGCAGGTGATGCATTTCC+TGG + Chr1:77166009-77166028 MsG0180004374.01.T01:intron 55.0%
CCAGGAAATGCATCACCTGC+TGG - Chr1:77166012-77166031 None:intergenic 55.0%
CGATGGCAGCGTGAATTGCA+GGG + Chr1:77165788-77165807 MsG0180004374.01.T01:intron 55.0%
CTCAAAAGAGGTTCAGGGGC+TGG - Chr1:77166977-77166996 None:intergenic 55.0%
CTGCTCCCCATCATCTTCTC+CGG - Chr1:77166592-77166611 None:intergenic 55.0%
GAACAAGAGGGGACATCCTG+TGG + Chr1:77173472-77173491 MsG0180004374.01.T01:CDS 55.0%
GACGGCTTCAGACCAGACAT+TGG + Chr1:77169340-77169359 MsG0180004374.01.T01:CDS 55.0%
GAGCAGGCCTGTCAGTACTA+TGG - Chr1:77167024-77167043 None:intergenic 55.0%
GAGGCTGCTATGGTGAACAG+GGG - Chr1:77166787-77166806 None:intergenic 55.0%
GCAATCCGGAGCTTAAGTCC+TGG + Chr1:77174479-77174498 MsG0180004374.01.T01:three_prime_UTR 55.0%
GCAGAGGCTGAGGTATACCA+AGG - Chr1:77166041-77166060 None:intergenic 55.0%
GCAGGCCATCAGAAGATTGC+TGG - Chr1:77167751-77167770 None:intergenic 55.0%
GCGACGTCTTAGGTTCATGC+AGG + Chr1:77174422-77174441 MsG0180004374.01.T01:exon 55.0%
GGATGTCCCCTCTTGTTCTC+TGG - Chr1:77173470-77173489 None:intergenic 55.0%
GGCTCCACTCTTGAGTCGAT+AGG - Chr1:77172397-77172416 None:intergenic 55.0%
GGCTTCAGACCAGACATTGG+AGG + Chr1:77169343-77169362 MsG0180004374.01.T01:CDS 55.0%
GGGACCTTGAGCCTACAAAG+TGG + Chr1:77169472-77169491 MsG0180004374.01.T01:intron 55.0%
GGGGGACCTACCTTGTCTAA+TGG + Chr1:77169819-77169838 MsG0180004374.01.T01:CDS 55.0%
GTTGCACCACGTGCGTTCAA+GGG + Chr1:77170279-77170298 MsG0180004374.01.T01:CDS 55.0%
GTTGGCCGGAGAAGATGATG+GGG + Chr1:77166584-77166603 MsG0180004374.01.T01:intron 55.0%
TCACTGAACAGTGGGAAGGG+TGG + Chr1:77173217-77173236 MsG0180004374.01.T01:intron 55.0%
TGCATCACCTGCTGGAGATG+GGG - Chr1:77166004-77166023 None:intergenic 55.0%
TGGGGGATGGGTAGCTCAAT+TGG + Chr1:77166239-77166258 MsG0180004374.01.T01:intron 55.0%
TGTCATTGTCCGGGTGACAG+TGG - Chr1:77172052-77172071 None:intergenic 55.0%
TGTTGCACCACGTGCGTTCA+AGG + Chr1:77170278-77170297 MsG0180004374.01.T01:CDS 55.0%
! ATCGACTCAAGAGTGGAGCC+AGG + Chr1:77172397-77172416 MsG0180004374.01.T01:CDS 55.0%
! CGATATAGGAGCATGGGGGA+TGG + Chr1:77166226-77166245 MsG0180004374.01.T01:intron 55.0%
! GTTCTCTGGTGCAAAGTGCC+GGG - Chr1:77173456-77173475 None:intergenic 55.0%
!! GGGCTAGACTAGCCGTTTTC+GGG - Chr1:77165141-77165160 None:intergenic 55.0%
!! GGGGCTAGACTAGCCGTTTT+CGG - Chr1:77165142-77165161 None:intergenic 55.0%
!! GTGGCCTATCGACTCAAGAG+TGG + Chr1:77172390-77172409 MsG0180004374.01.T01:CDS 55.0%
!! TTGTGTGCCGATTTCACCGG+AGG + Chr1:77164749-77164768 MsG0180004374.01.T01:CDS 55.0%
ACAGTGGGAAGGGTGGAGAG+AGG + Chr1:77173224-77173243 MsG0180004374.01.T01:intron 60.0%
CGACCCCGCCTAGTGAGATA+TGG + Chr1:77172884-77172903 MsG0180004374.01.T01:intron 60.0%
CGGGTGACAGTGGAAGGAAG+TGG - Chr1:77172042-77172061 None:intergenic 60.0%
GAAGGACTCGGATGGTAGGC+CGG + Chr1:77171610-77171629 MsG0180004374.01.T01:CDS 60.0%
GCATCACCTGCTGGAGATGG+GGG - Chr1:77166003-77166022 None:intergenic 60.0%
TGCAACAGCAGTTCGCCCAG+AGG - Chr1:77170265-77170284 None:intergenic 60.0%
ACTAGGCGGGGTCGGCTACA+TGG - Chr1:77172878-77172897 None:intergenic 65.0%
CTCGGATGGTAGGCCGGATG+AGG + Chr1:77171616-77171635 MsG0180004374.01.T01:CDS 65.0%
TCACCTCCCCCATCTCCAGC+AGG + Chr1:77165994-77166013 MsG0180004374.01.T01:intron 65.0%
TCACCTGCTGGAGATGGGGG+AGG - Chr1:77166000-77166019 None:intergenic 65.0%
TGGGGAGCAGCGAGTCACTG+CGG + Chr1:77166602-77166621 MsG0180004374.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 77164410 77174955 77164410 ID=MsG0180004374.01;Name=MsG0180004374.01
Chr1 mRNA 77164410 77174955 77164410 ID=MsG0180004374.01.T01;Parent=MsG0180004374.01;Name=MsG0180004374.01.T01;_AED=0.35;_eAED=0.35;_QI=114|0.83|0.92|1|0.91|0.84|13|522|836
Chr1 exon 77164410 77164491 77164410 ID=MsG0180004374.01.T01:exon:14848;Parent=MsG0180004374.01.T01
Chr1 exon 77164673 77164856 77164673 ID=MsG0180004374.01.T01:exon:14849;Parent=MsG0180004374.01.T01
Chr1 exon 77167691 77167945 77167691 ID=MsG0180004374.01.T01:exon:14850;Parent=MsG0180004374.01.T01
Chr1 exon 77168264 77168405 77168264 ID=MsG0180004374.01.T01:exon:14851;Parent=MsG0180004374.01.T01
Chr1 exon 77169137 77169199 77169137 ID=MsG0180004374.01.T01:exon:14852;Parent=MsG0180004374.01.T01
Chr1 exon 77169296 77169391 77169296 ID=MsG0180004374.01.T01:exon:14853;Parent=MsG0180004374.01.T01
Chr1 exon 77169702 77170088 77169702 ID=MsG0180004374.01.T01:exon:14854;Parent=MsG0180004374.01.T01
Chr1 exon 77170216 77170356 77170216 ID=MsG0180004374.01.T01:exon:14855;Parent=MsG0180004374.01.T01
Chr1 exon 77171536 77171706 77171536 ID=MsG0180004374.01.T01:exon:14856;Parent=MsG0180004374.01.T01
Chr1 exon 77172312 77172457 77172312 ID=MsG0180004374.01.T01:exon:14857;Parent=MsG0180004374.01.T01
Chr1 exon 77173228 77173770 77173228 ID=MsG0180004374.01.T01:exon:14858;Parent=MsG0180004374.01.T01
Chr1 exon 77173871 77174141 77173871 ID=MsG0180004374.01.T01:exon:14859;Parent=MsG0180004374.01.T01
Chr1 exon 77174290 77174955 77174290 ID=MsG0180004374.01.T01:exon:14860;Parent=MsG0180004374.01.T01
Chr1 five_prime_UTR 77164410 77164491 77164410 ID=MsG0180004374.01.T01:five_prime_utr;Parent=MsG0180004374.01.T01
Chr1 five_prime_UTR 77164673 77164704 77164673 ID=MsG0180004374.01.T01:five_prime_utr;Parent=MsG0180004374.01.T01
Chr1 CDS 77164705 77164856 77164705 ID=MsG0180004374.01.T01:cds;Parent=MsG0180004374.01.T01
Chr1 CDS 77167691 77167945 77167691 ID=MsG0180004374.01.T01:cds;Parent=MsG0180004374.01.T01
Chr1 CDS 77168264 77168405 77168264 ID=MsG0180004374.01.T01:cds;Parent=MsG0180004374.01.T01
Chr1 CDS 77169137 77169199 77169137 ID=MsG0180004374.01.T01:cds;Parent=MsG0180004374.01.T01
Chr1 CDS 77169296 77169391 77169296 ID=MsG0180004374.01.T01:cds;Parent=MsG0180004374.01.T01
Chr1 CDS 77169702 77170088 77169702 ID=MsG0180004374.01.T01:cds;Parent=MsG0180004374.01.T01
Chr1 CDS 77170216 77170356 77170216 ID=MsG0180004374.01.T01:cds;Parent=MsG0180004374.01.T01
Chr1 CDS 77171536 77171706 77171536 ID=MsG0180004374.01.T01:cds;Parent=MsG0180004374.01.T01
Chr1 CDS 77172312 77172457 77172312 ID=MsG0180004374.01.T01:cds;Parent=MsG0180004374.01.T01
Chr1 CDS 77173228 77173770 77173228 ID=MsG0180004374.01.T01:cds;Parent=MsG0180004374.01.T01
Chr1 CDS 77173871 77174141 77173871 ID=MsG0180004374.01.T01:cds;Parent=MsG0180004374.01.T01
Chr1 CDS 77174290 77174433 77174290 ID=MsG0180004374.01.T01:cds;Parent=MsG0180004374.01.T01
Chr1 three_prime_UTR 77174434 77174955 77174434 ID=MsG0180004374.01.T01:three_prime_utr;Parent=MsG0180004374.01.T01
Gene Sequence

>MsG0180004374.01.T01

ATGACGATTGCTGAATCGGATTTTCCGATTGATAATGGGATGAGTTGTGTGCCGATTTCACCGGAGGAAGAGAAACGGATCGTGAAGGAGTTAATTAAGCAATCGGAGCTTAATTTGAAAGATGGGAACTTATACTTTATTATTTCCAATAGATGGTTTTCAAGTTGGCAGAGGTATGTTGGCCATTGTGATGGAATACCTTCTACTGACCAGCAATCTTCTGATGGCCTGCATGCCGATACTGTTCATTTGAAGATAACTGATAGACCCGGTCCAATTGATAATTCTGATATAATTTCAAATGGTAGTAATTGTGACGGGAGTGATTTAGATATTCATCGACCATTGGAAGAGGATAAAGACTATGTTTTAGTTCCTCAACAAGTATGGGAAAGGCTGTTGGGATGGTACAAAGGTGGACCAGCATTGCCAAGGAAGTTGATTTCTCAGGGTGTACCGAAGCAGTACAGCATTGAGGTGTACCCACTTAATCTAAAGGTGACTGATGCGAGAGACAACAGTGTTTCAATTGTAAAATTAAGCAAAAAGGCTACCTTGAGTGAACTCTATGAGCTAGTGTGCAAAGTTAAAGGAGTAGAACAGCACAAGGTGGCTTCTATTTGGGATTACTACAATTTGAACAAAGAGTCATTGCTGACGGCTTCAGACCAGACATTGGAGGATGCAAACTTGGCAATGGACCAAGACATTCTTCTAGAAGTTTCAGTCGATGCTGATCGTTCCTCTCATTCTGGTGTGCATTCAATGGGAAATGAATTAGCATTGGTGCCATTAGAACCTCCAAGATCATCTGTATCAATTGCAGGGGGACCTACCTTGTCTAATGGTCACTCAAGTGGGTCTGGTTTTAATTTCTATCAGGGAAGTTCTGTAAGTTCATCACTGACTACCATGGATGATAAATATGACGTCTATAGTGGTGAAAGAGGTGGTTTAGCAGGACTGCAGAACTTGGGGAATACCTGCTTTATGAATAGCGCTCTACAATGTTTGGTCCACACTCCACCACTTGCTGAATTTTTCTTAGAAGATTACAGCGATGAGATCAACATGGAGAATCCTTTAGGAATGCGTGGTGAATTAGCACTTGCATTTGGGGACTTGTTGAGGAAACTTTGGTCCTCTGGGCGAACTGCTGTTGCACCACGTGCGTTCAAGGGAAAGCTGGCCCGATTTGCTCCACAATTCAGTGGTTATAACCAGCATGATTCTCAAGAATTGCTAGCCTTTTTATTGGATGGACTGCATGAAGATTTGAATCGTGTGAAACAAAAGCCTTACATTGAAATGAAGGACTCGGATGGTAGGCCGGATGAGGAAGTCGCAAATGAGTGTTGGAAAAATCATATGGCTCGGAATGATTCATTGATTGTTGATGAATGCCAGGTTTATGAGCATAAGATTTATCGTTATCTAGATAATCCATTGGAATCATTGACTTCAATAAAGGATGAAGAACATATTGTGGCCTATCGACTCAAGAGTGGAGCCAGGAAAACAAAATTAGAAATATTGCATCGACATCTGGATACTGGGAAGGGTGGAGAGAGGAAGATCTTTGGAACTCCCTTGGTTACTTATTTGGAAGAAGACCCTCAATATGGAGCCAACATTGAGACATATGTACATAGAATGTTGGCACCTTTAAGAAAAGCACATTCTTCAACTAAGTCTCATGAAGGGAAGGAAACTGGTTTCATCTCAGGTGGTAGTGACGAGCAATCAAGCATCTCTAATTCTCACAGTGAACTGAGGAACCCGGCACTTTGCACCAGAGAACAAGAGGGGACATCCTGTGGAGATTCATCTTTCCAACTTGTTTTAACTAACGAAGGCTGTTTTAGCTGTGAGCCCATTGACAAGGCATCTGTGATAAAACCCAGTGCACATATAAAGGTCTTTGTTGACTGGACTGAGAAAGAATATGAATTATATGATGCAAGCTATTTGAGGGATCTTCCTGAAGTTCACAAAACTGGATTCACTGTGAAAAAAACCCGGCAAGAAGCTATTTCTTTGTTTTCATGCTTGGAGGCATTCTTGACCGAAGAACCTCTAGGACCAGATGACATGTGGTACTGCCCTCAATGCAAGGAACACAGACAAGCTACCAAGAAACTGGACTTGTGGAAATTGCCAGAGATTTTGGTTTTTCACTTGAAACGATTCTCATATAGCAGATACTTGAAAAACAAACTTGACACCTTTGTGAACTTCCCCATTCACAATCTGGATTTGACCAAGTATGTGAAAAGTAAAGATGGCCCATCCTATGTGTATAACCTTTATGCAATCAGCAACCATTACGGTGGTTTAGGTGGTGGGCATTACACTGCATATGCTAAGTTGATTGATGATAATAAGTGGTACCATTTCGATGACAGTCACGTCAGTCCTGTTTCTGAAGCTGAAATTAAATCTTCAGCTGCATATGTGTTATTTTATCAGAGAGTTGGAAGCGACGTCCAGATGGAAGAAGCGACGTCTTAG
Protein sequence

>MsG0180004374.01.T01

MTIAESDFPIDNGMSCVPISPEEEKRIVKELIKQSELNLKDGNLYFIISNRWFSSWQRYVGHCDGIPSTDQQSSDGLHADTVHLKITDRPGPIDNSDIISNGSNCDGSDLDIHRPLEEDKDYVLVPQQVWERLLGWYKGGPALPRKLISQGVPKQYSIEVYPLNLKVTDARDNSVSIVKLSKKATLSELYELVCKVKGVEQHKVASIWDYYNLNKESLLTASDQTLEDANLAMDQDILLEVSVDADRSSHSGVHSMGNELALVPLEPPRSSVSIAGGPTLSNGHSSGSGFNFYQGSSVSSSLTTMDDKYDVYSGERGGLAGLQNLGNTCFMNSALQCLVHTPPLAEFFLEDYSDEINMENPLGMRGELALAFGDLLRKLWSSGRTAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSDGRPDEEVANECWKNHMARNDSLIVDECQVYEHKIYRYLDNPLESLTSIKDEEHIVAYRLKSGARKTKLEILHRHLDTGKGGERKIFGTPLVTYLEEDPQYGANIETYVHRMLAPLRKAHSSTKSHEGKETGFISGGSDEQSSISNSHSELRNPALCTREQEGTSCGDSSFQLVLTNEGCFSCEPIDKASVIKPSAHIKVFVDWTEKEYELYDASYLRDLPEVHKTGFTVKKTRQEAISLFSCLEAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWKLPEILVFHLKRFSYSRYLKNKLDTFVNFPIHNLDLTKYVKSKDGPSYVYNLYAISNHYGGLGGGHYTAYAKLIDDNKWYHFDDSHVSPVSEAEIKSSAAYVLFYQRVGSDVQMEEATS*