AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004388.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004388.01.T01 MTR_1g078200 97.917 144 3 0 9 152 76 219 4.29e-101 290
MsG0180004388.01.T01 MTR_7g405790 61.594 138 49 1 9 142 77 214 1.54e-54 172
MsG0180004388.01.T01 MTR_7g051940 66.667 117 39 0 9 125 75 191 1.05e-49 160
MsG0180004388.01.T01 MTR_8g089985 56.923 130 56 0 9 138 79 208 5.41e-49 158
MsG0180004388.01.T01 MTR_3g086980 54.615 130 59 0 9 138 78 207 2.91e-47 154
MsG0180004388.01.T01 MTR_4g064897 59.292 113 46 0 9 121 74 186 2.92e-46 151
MsG0180004388.01.T01 MTR_2g005510 51.538 130 62 1 9 138 77 205 3.77e-42 140
MsG0180004388.01.T01 MTR_1g052475 53.982 113 52 0 9 121 77 189 6.25e-42 140
MsG0180004388.01.T01 MTR_2g083860 57.798 109 46 0 9 117 75 183 6.26e-42 140
MsG0180004388.01.T01 MTR_3g069510 56.637 113 49 0 9 121 74 186 1.17e-41 139
MsG0180004388.01.T01 MTR_0262s0050 47.407 135 71 0 9 143 77 211 2.02e-41 139
MsG0180004388.01.T01 MTR_8g036220 57.944 107 45 0 9 115 78 184 3.42e-41 138
MsG0180004388.01.T01 MTR_4g079350 50.725 138 64 2 9 146 75 208 5.73e-41 137
MsG0180004388.01.T01 MTR_2g014990 50.000 138 65 2 9 146 75 208 2.72e-40 135
MsG0180004388.01.T01 MTR_2g075950 49.624 133 65 1 9 141 75 205 4.57e-40 135
MsG0180004388.01.T01 MTR_4g088090 47.826 138 68 2 9 146 75 208 3.42e-39 133
MsG0180004388.01.T01 MTR_8g027220 53.043 115 54 0 9 123 88 202 6.54e-39 132
MsG0180004388.01.T01 MTR_2g090865 50.000 128 60 1 9 136 73 196 9.14e-38 129
MsG0180004388.01.T01 MTR_6g079550 54.128 109 50 0 9 117 74 182 2.29e-34 120
MsG0180004388.01.T01 MTR_8g107070 46.617 133 70 1 9 141 76 207 7.61e-31 113
MsG0180004388.01.T01 MTR_8g031660 49.505 101 51 0 9 109 68 168 3.25e-29 107
MsG0180004388.01.T01 MTR_2g027660 48.515 101 52 0 9 109 68 168 2.79e-28 105
MsG0180004388.01.T01 MTR_4g099470 44.860 107 59 0 9 115 46 152 4.14e-28 103
MsG0180004388.01.T01 MTR_6g021790 48.077 104 53 1 9 111 68 171 1.96e-27 102
MsG0180004388.01.T01 MTR_8g031870 50.538 93 46 0 9 101 68 160 6.96e-27 100
MsG0180004388.01.T01 MTR_7g117910 54.430 79 36 0 9 87 82 160 9.05e-27 101
MsG0180004388.01.T01 MTR_2g005500 46.078 102 55 0 9 110 71 172 1.19e-25 97.8
MsG0180004388.01.T01 MTR_1g068740 45.545 101 54 1 9 108 77 177 1.22e-25 98.2
MsG0180004388.01.T01 MTR_1g068730 45.545 101 54 1 9 108 77 177 1.41e-25 98.2
MsG0180004388.01.T01 MTR_1g115325 44.037 109 60 1 9 116 77 185 1.49e-25 98.2
MsG0180004388.01.T01 MTR_8g031680 42.593 108 62 0 9 116 68 175 1.54e-25 97.8
MsG0180004388.01.T01 MTR_7g100020 45.545 101 54 1 9 108 77 177 2.38e-25 97.4
MsG0180004388.01.T01 MTR_7g081700 45.000 100 55 0 9 108 70 169 1.68e-24 95.1
MsG0180004388.01.T01 MTR_2g096550 46.078 102 53 2 9 108 77 178 4.11e-24 94.4
MsG0180004388.01.T01 MTR_8g006970 44.000 100 56 0 9 108 70 169 1.80e-23 91.7
MsG0180004388.01.T01 MTR_8g006970 44.000 100 56 0 9 108 84 183 2.40e-23 92.4
MsG0180004388.01.T01 MTR_3g064390 42.000 100 58 0 9 108 72 171 4.51e-23 91.3
MsG0180004388.01.T01 MTR_8g031830 46.067 89 48 0 9 97 68 156 1.85e-22 89.7
MsG0180004388.01.T01 MTR_4g063160 44.681 94 51 1 16 108 86 179 1.57e-21 87.4
MsG0180004388.01.T01 MTR_5g076590 39.000 100 61 0 9 108 72 171 2.11e-21 87.0
MsG0180004388.01.T01 MTR_1g094220 39.000 100 61 0 9 108 94 193 4.76e-21 85.9
MsG0180004388.01.T01 MTR_1g094220 38.182 110 63 1 9 113 94 203 7.35e-21 85.5
MsG0180004388.01.T01 MTR_2g102060 37.383 107 67 0 9 115 72 178 2.12e-20 84.3
MsG0180004388.01.T01 MTR_1g094220 40.426 94 56 0 9 102 94 187 1.14e-19 82.4
MsG0180004388.01.T01 MTR_7g103070 42.157 102 57 2 9 108 22 123 1.47e-19 80.9
MsG0180004388.01.T01 MTR_1g062760 42.056 107 60 2 9 113 75 181 1.54e-19 82.4
MsG0180004388.01.T01 MTR_1g094220 40.426 94 56 0 9 102 94 187 1.93e-19 82.4
MsG0180004388.01.T01 MTR_1g090717 38.983 118 70 2 9 124 78 195 3.35e-19 81.3
MsG0180004388.01.T01 MTR_7g103070 42.157 102 57 2 9 108 78 179 9.73e-19 80.1
MsG0180004388.01.T01 MTR_8g093740 36.975 119 73 2 9 125 41 159 3.90e-18 77.8
MsG0180004388.01.T01 MTR_8g103550 35.000 100 65 0 9 108 71 170 4.23e-18 78.2
MsG0180004388.01.T01 MTR_8g093740 36.975 119 73 2 9 125 74 192 1.09e-17 77.4
MsG0180004388.01.T01 MTR_5g013900 37.500 96 60 0 9 104 71 166 2.39e-17 76.3
MsG0180004388.01.T01 MTR_4g098950 36.458 96 61 0 9 104 71 166 2.53e-17 76.3
MsG0180004388.01.T01 MTR_3g087160 33.051 118 73 1 9 126 71 182 3.76e-17 75.9
MsG0180004388.01.T01 MTR_3g096350 38.318 107 64 2 9 113 73 179 9.72e-17 74.7
MsG0180004388.01.T01 MTR_8g090215 35.417 96 62 0 9 104 71 166 1.36e-16 74.3
MsG0180004388.01.T01 MTR_1g029450 33.588 131 76 3 9 128 78 208 2.68e-16 73.6
MsG0180004388.01.T01 MTR_2g078000 60.417 48 19 0 9 56 47 94 3.02e-16 70.9
MsG0180004388.01.T01 MTR_1g068740 45.455 66 36 0 9 74 77 142 1.77e-15 71.2
MsG0180004388.01.T01 MTR_1g068730 45.455 66 36 0 9 74 77 142 2.30e-15 70.5
MsG0180004388.01.T01 MTR_2g078560 47.619 63 27 1 9 65 54 116 2.88e-13 66.6
MsG0180004388.01.T01 MTR_2g005500 47.143 70 37 0 41 110 63 132 1.73e-12 62.4
MsG0180004388.01.T01 MTR_3g064390 41.935 62 36 0 9 70 72 133 2.60e-12 62.0
MsG0180004388.01.T01 MTR_4g069850 33.019 106 64 3 9 107 70 175 3.08e-12 62.8
MsG0180004388.01.T01 MTR_1g069245 54.348 46 21 0 9 54 154 199 7.67e-11 58.9
MsG0180004388.01.T02 MTR_1g078200 97.917 144 3 0 9 152 76 219 4.29e-101 290
MsG0180004388.01.T02 MTR_7g405790 61.594 138 49 1 9 142 77 214 1.54e-54 172
MsG0180004388.01.T02 MTR_7g051940 66.667 117 39 0 9 125 75 191 1.05e-49 160
MsG0180004388.01.T02 MTR_8g089985 56.923 130 56 0 9 138 79 208 5.41e-49 158
MsG0180004388.01.T02 MTR_3g086980 54.615 130 59 0 9 138 78 207 2.91e-47 154
MsG0180004388.01.T02 MTR_4g064897 59.292 113 46 0 9 121 74 186 2.92e-46 151
MsG0180004388.01.T02 MTR_2g005510 51.538 130 62 1 9 138 77 205 3.77e-42 140
MsG0180004388.01.T02 MTR_1g052475 53.982 113 52 0 9 121 77 189 6.25e-42 140
MsG0180004388.01.T02 MTR_2g083860 57.798 109 46 0 9 117 75 183 6.26e-42 140
MsG0180004388.01.T02 MTR_3g069510 56.637 113 49 0 9 121 74 186 1.17e-41 139
MsG0180004388.01.T02 MTR_0262s0050 47.407 135 71 0 9 143 77 211 2.02e-41 139
MsG0180004388.01.T02 MTR_8g036220 57.944 107 45 0 9 115 78 184 3.42e-41 138
MsG0180004388.01.T02 MTR_4g079350 50.725 138 64 2 9 146 75 208 5.73e-41 137
MsG0180004388.01.T02 MTR_2g014990 50.000 138 65 2 9 146 75 208 2.72e-40 135
MsG0180004388.01.T02 MTR_2g075950 49.624 133 65 1 9 141 75 205 4.57e-40 135
MsG0180004388.01.T02 MTR_4g088090 47.826 138 68 2 9 146 75 208 3.42e-39 133
MsG0180004388.01.T02 MTR_8g027220 53.043 115 54 0 9 123 88 202 6.54e-39 132
MsG0180004388.01.T02 MTR_2g090865 50.000 128 60 1 9 136 73 196 9.14e-38 129
MsG0180004388.01.T02 MTR_6g079550 54.128 109 50 0 9 117 74 182 2.29e-34 120
MsG0180004388.01.T02 MTR_8g107070 46.617 133 70 1 9 141 76 207 7.61e-31 113
MsG0180004388.01.T02 MTR_8g031660 49.505 101 51 0 9 109 68 168 3.25e-29 107
MsG0180004388.01.T02 MTR_2g027660 48.515 101 52 0 9 109 68 168 2.79e-28 105
MsG0180004388.01.T02 MTR_4g099470 44.860 107 59 0 9 115 46 152 4.14e-28 103
MsG0180004388.01.T02 MTR_6g021790 48.077 104 53 1 9 111 68 171 1.96e-27 102
MsG0180004388.01.T02 MTR_8g031870 50.538 93 46 0 9 101 68 160 6.96e-27 100
MsG0180004388.01.T02 MTR_7g117910 54.430 79 36 0 9 87 82 160 9.05e-27 101
MsG0180004388.01.T02 MTR_2g005500 46.078 102 55 0 9 110 71 172 1.19e-25 97.8
MsG0180004388.01.T02 MTR_1g068740 45.545 101 54 1 9 108 77 177 1.22e-25 98.2
MsG0180004388.01.T02 MTR_1g068730 45.545 101 54 1 9 108 77 177 1.41e-25 98.2
MsG0180004388.01.T02 MTR_1g115325 44.037 109 60 1 9 116 77 185 1.49e-25 98.2
MsG0180004388.01.T02 MTR_8g031680 42.593 108 62 0 9 116 68 175 1.54e-25 97.8
MsG0180004388.01.T02 MTR_7g100020 45.545 101 54 1 9 108 77 177 2.38e-25 97.4
MsG0180004388.01.T02 MTR_7g081700 45.000 100 55 0 9 108 70 169 1.68e-24 95.1
MsG0180004388.01.T02 MTR_2g096550 46.078 102 53 2 9 108 77 178 4.11e-24 94.4
MsG0180004388.01.T02 MTR_8g006970 44.000 100 56 0 9 108 70 169 1.80e-23 91.7
MsG0180004388.01.T02 MTR_8g006970 44.000 100 56 0 9 108 84 183 2.40e-23 92.4
MsG0180004388.01.T02 MTR_3g064390 42.000 100 58 0 9 108 72 171 4.51e-23 91.3
MsG0180004388.01.T02 MTR_8g031830 46.067 89 48 0 9 97 68 156 1.85e-22 89.7
MsG0180004388.01.T02 MTR_4g063160 44.681 94 51 1 16 108 86 179 1.57e-21 87.4
MsG0180004388.01.T02 MTR_5g076590 39.000 100 61 0 9 108 72 171 2.11e-21 87.0
MsG0180004388.01.T02 MTR_1g094220 39.000 100 61 0 9 108 94 193 4.76e-21 85.9
MsG0180004388.01.T02 MTR_1g094220 38.182 110 63 1 9 113 94 203 7.35e-21 85.5
MsG0180004388.01.T02 MTR_2g102060 37.383 107 67 0 9 115 72 178 2.12e-20 84.3
MsG0180004388.01.T02 MTR_1g094220 40.426 94 56 0 9 102 94 187 1.14e-19 82.4
MsG0180004388.01.T02 MTR_7g103070 42.157 102 57 2 9 108 22 123 1.47e-19 80.9
MsG0180004388.01.T02 MTR_1g062760 42.056 107 60 2 9 113 75 181 1.54e-19 82.4
MsG0180004388.01.T02 MTR_1g094220 40.426 94 56 0 9 102 94 187 1.93e-19 82.4
MsG0180004388.01.T02 MTR_1g090717 38.983 118 70 2 9 124 78 195 3.35e-19 81.3
MsG0180004388.01.T02 MTR_7g103070 42.157 102 57 2 9 108 78 179 9.73e-19 80.1
MsG0180004388.01.T02 MTR_8g093740 36.975 119 73 2 9 125 41 159 3.90e-18 77.8
MsG0180004388.01.T02 MTR_8g103550 35.000 100 65 0 9 108 71 170 4.23e-18 78.2
MsG0180004388.01.T02 MTR_8g093740 36.975 119 73 2 9 125 74 192 1.09e-17 77.4
MsG0180004388.01.T02 MTR_5g013900 37.500 96 60 0 9 104 71 166 2.39e-17 76.3
MsG0180004388.01.T02 MTR_4g098950 36.458 96 61 0 9 104 71 166 2.53e-17 76.3
MsG0180004388.01.T02 MTR_3g087160 33.051 118 73 1 9 126 71 182 3.76e-17 75.9
MsG0180004388.01.T02 MTR_3g096350 38.318 107 64 2 9 113 73 179 9.72e-17 74.7
MsG0180004388.01.T02 MTR_8g090215 35.417 96 62 0 9 104 71 166 1.36e-16 74.3
MsG0180004388.01.T02 MTR_1g029450 33.588 131 76 3 9 128 78 208 2.68e-16 73.6
MsG0180004388.01.T02 MTR_2g078000 60.417 48 19 0 9 56 47 94 3.02e-16 70.9
MsG0180004388.01.T02 MTR_1g068740 45.455 66 36 0 9 74 77 142 1.77e-15 71.2
MsG0180004388.01.T02 MTR_1g068730 45.455 66 36 0 9 74 77 142 2.30e-15 70.5
MsG0180004388.01.T02 MTR_2g078560 47.619 63 27 1 9 65 54 116 2.88e-13 66.6
MsG0180004388.01.T02 MTR_2g005500 47.143 70 37 0 41 110 63 132 1.73e-12 62.4
MsG0180004388.01.T02 MTR_3g064390 41.935 62 36 0 9 70 72 133 2.60e-12 62.0
MsG0180004388.01.T02 MTR_4g069850 33.019 106 64 3 9 107 70 175 3.08e-12 62.8
MsG0180004388.01.T02 MTR_1g069245 54.348 46 21 0 9 54 154 199 7.67e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004388.01.T01 AT5G47520 81.944 144 22 1 9 152 76 215 4.52e-79 234
MsG0180004388.01.T01 AT2G31680 65.812 117 40 0 9 125 74 190 6.88e-50 160
MsG0180004388.01.T01 AT2G43130 62.393 117 44 0 9 125 74 190 7.32e-49 157
MsG0180004388.01.T01 AT1G05810 64.103 117 42 0 9 125 74 190 4.02e-48 156
MsG0180004388.01.T01 AT5G65270 61.947 113 43 0 9 121 79 191 4.59e-48 156
MsG0180004388.01.T01 AT1G05810 57.246 138 55 1 9 142 120 257 1.30e-47 156
MsG0180004388.01.T01 AT3G07410 57.246 138 56 1 9 146 74 208 2.47e-47 154
MsG0180004388.01.T01 AT5G47960 52.113 142 66 1 9 148 77 218 6.92e-47 153
MsG0180004388.01.T01 AT4G39990 51.493 134 63 1 9 142 79 210 3.31e-45 149
MsG0180004388.01.T01 AT1G07410 57.522 113 48 0 9 121 74 186 5.33e-45 148
MsG0180004388.01.T01 AT5G59150 60.748 107 42 0 9 115 23 129 6.97e-44 143
MsG0180004388.01.T01 AT3G12160 47.143 140 74 0 9 148 77 216 9.02e-44 145
MsG0180004388.01.T01 AT3G46830 60.748 107 42 0 9 115 74 180 1.64e-43 144
MsG0180004388.01.T01 AT3G46830 60.748 107 42 0 9 115 74 180 1.64e-43 144
MsG0180004388.01.T01 AT5G59150 60.748 107 42 0 9 115 74 180 3.94e-43 143
MsG0180004388.01.T01 AT4G18430 50.000 138 65 1 9 146 75 208 1.08e-42 142
MsG0180004388.01.T01 AT1G16920 57.522 113 48 0 9 121 75 187 1.63e-41 139
MsG0180004388.01.T01 AT5G60860 50.000 138 65 1 9 146 75 208 3.65e-41 138
MsG0180004388.01.T01 AT1G09630 49.219 128 63 1 9 136 74 199 1.09e-40 137
MsG0180004388.01.T01 AT4G18800 55.752 113 50 0 9 121 75 187 1.15e-40 137
MsG0180004388.01.T01 AT1G28550 48.551 138 68 1 9 146 75 209 6.11e-40 135
MsG0180004388.01.T01 AT1G18200 48.507 134 64 1 9 137 75 208 7.88e-40 135
MsG0180004388.01.T01 AT1G06400 47.761 134 67 1 9 142 75 205 1.07e-38 132
MsG0180004388.01.T01 AT5G45750 55.046 109 49 0 9 117 75 183 1.35e-38 131
MsG0180004388.01.T01 AT3G15060 46.897 145 70 2 9 153 75 212 1.85e-38 131
MsG0180004388.01.T01 AT1G73640 53.704 108 50 0 9 116 75 182 1.29e-37 129
MsG0180004388.01.T01 AT2G33870 47.101 138 70 1 9 146 75 209 2.23e-37 128
MsG0180004388.01.T01 AT1G01200 51.754 114 52 2 9 119 90 203 1.88e-32 116
MsG0180004388.01.T01 AT4G17160 50.495 101 50 0 9 109 68 168 1.62e-29 108
MsG0180004388.01.T01 AT4G17170 45.872 109 59 0 9 117 68 176 1.83e-28 105
MsG0180004388.01.T01 AT4G35860 47.115 104 54 1 9 111 22 125 4.54e-28 103
MsG0180004388.01.T01 AT4G35860 47.115 104 54 1 9 111 68 171 2.68e-27 102
MsG0180004388.01.T01 AT5G46025 45.794 107 57 1 5 110 2 108 2.82e-26 97.1
MsG0180004388.01.T01 AT3G11730 42.857 112 59 1 9 120 70 176 3.30e-26 99.4
MsG0180004388.01.T01 AT5G03520 46.535 101 53 1 9 108 67 167 3.45e-26 99.4
MsG0180004388.01.T01 AT5G03520 46.535 101 53 1 9 108 77 177 4.25e-26 99.4
MsG0180004388.01.T01 AT1G02130 45.000 100 55 0 9 108 70 169 6.87e-26 98.6
MsG0180004388.01.T01 AT3G09900 45.545 101 54 1 9 108 77 177 8.61e-26 99.0
MsG0180004388.01.T01 AT3G46060 45.283 106 57 1 9 113 77 182 5.78e-25 96.7
MsG0180004388.01.T01 AT3G46060 45.283 106 57 1 9 113 77 182 5.78e-25 96.7
MsG0180004388.01.T01 AT3G46060 45.283 106 57 1 9 113 77 182 5.78e-25 96.7
MsG0180004388.01.T01 AT5G59840 45.545 101 54 1 9 108 77 177 6.93e-25 96.3
MsG0180004388.01.T01 AT3G53610 44.554 101 55 1 9 108 77 177 3.72e-24 94.4
MsG0180004388.01.T01 AT3G53610 44.554 101 55 1 9 108 77 177 3.72e-24 94.4
MsG0180004388.01.T01 AT3G53610 44.554 101 55 1 9 108 77 177 3.72e-24 94.4
MsG0180004388.01.T01 AT3G54840 43.000 100 57 0 9 108 62 161 4.37e-24 93.2
MsG0180004388.01.T01 AT3G54840 43.000 100 57 0 9 108 96 195 9.58e-24 93.2
MsG0180004388.01.T01 AT3G54840 44.211 95 53 0 9 103 96 190 4.78e-23 90.9
MsG0180004388.01.T01 AT5G47200 42.000 100 58 0 9 108 70 169 8.49e-23 90.5
MsG0180004388.01.T01 AT4G17530 42.000 100 58 0 9 108 70 169 9.85e-23 90.5
MsG0180004388.01.T01 AT4G19640 37.963 108 59 1 9 116 72 171 7.48e-22 88.2
MsG0180004388.01.T01 AT5G45130 39.000 100 61 0 9 108 72 171 4.83e-21 85.9
MsG0180004388.01.T01 AT5G45130 39.000 100 61 0 9 108 80 179 7.60e-21 85.5
MsG0180004388.01.T01 AT4G39890 38.144 97 59 1 9 104 71 167 2.33e-18 79.3
MsG0180004388.01.T01 AT5G03530 41.121 107 61 2 9 113 74 180 2.73e-18 79.0
MsG0180004388.01.T01 AT5G03530 41.121 107 61 2 9 113 74 180 2.73e-18 79.0
MsG0180004388.01.T01 AT2G44610 37.500 96 60 0 9 104 71 166 1.55e-17 77.0
MsG0180004388.01.T01 AT1G43890 40.196 102 59 2 9 108 74 175 1.59e-17 77.0
MsG0180004388.01.T01 AT1G43890 40.196 102 59 2 9 108 74 175 1.59e-17 77.0
MsG0180004388.01.T01 AT1G43890 40.196 102 59 2 9 108 74 175 1.59e-17 77.0
MsG0180004388.01.T01 AT3G09910 37.383 107 65 2 9 113 74 180 3.28e-17 75.9
MsG0180004388.01.T01 AT3G09910 37.383 107 65 2 9 113 74 180 3.28e-17 75.9
MsG0180004388.01.T01 AT3G09910 37.383 107 65 2 9 113 74 180 3.28e-17 75.9
MsG0180004388.01.T01 AT5G10260 36.458 96 61 0 9 104 71 166 4.37e-17 75.9
MsG0180004388.01.T01 AT3G09910 33.333 120 78 2 9 126 74 193 7.75e-17 74.7
MsG0180004388.01.T01 AT3G09910 33.333 120 78 2 9 126 74 193 7.75e-17 74.7
MsG0180004388.01.T01 AT5G64990 35.484 93 60 0 9 101 69 161 6.98e-15 69.7
MsG0180004388.01.T01 AT5G64990 35.484 93 60 0 9 101 76 168 7.97e-15 69.7
MsG0180004388.01.T01 AT2G22290 33.333 96 64 0 9 104 71 166 1.33e-14 68.9
MsG0180004388.01.T01 AT4G19640 37.143 70 44 0 9 78 72 141 7.32e-13 63.2
MsG0180004388.01.T01 AT4G19640 36.620 71 45 0 9 79 72 142 1.70e-12 63.2
MsG0180004388.01.T01 AT1G22740 34.286 105 62 2 9 106 70 174 2.07e-11 60.5
MsG0180004388.01.T01 AT4G08190 43.750 64 33 1 38 101 67 127 7.24e-11 57.4
MsG0180004388.01.T02 AT5G47520 81.944 144 22 1 9 152 76 215 4.52e-79 234
MsG0180004388.01.T02 AT2G31680 65.812 117 40 0 9 125 74 190 6.88e-50 160
MsG0180004388.01.T02 AT2G43130 62.393 117 44 0 9 125 74 190 7.32e-49 157
MsG0180004388.01.T02 AT1G05810 64.103 117 42 0 9 125 74 190 4.02e-48 156
MsG0180004388.01.T02 AT5G65270 61.947 113 43 0 9 121 79 191 4.59e-48 156
MsG0180004388.01.T02 AT1G05810 57.246 138 55 1 9 142 120 257 1.30e-47 156
MsG0180004388.01.T02 AT3G07410 57.246 138 56 1 9 146 74 208 2.47e-47 154
MsG0180004388.01.T02 AT5G47960 52.113 142 66 1 9 148 77 218 6.92e-47 153
MsG0180004388.01.T02 AT4G39990 51.493 134 63 1 9 142 79 210 3.31e-45 149
MsG0180004388.01.T02 AT1G07410 57.522 113 48 0 9 121 74 186 5.33e-45 148
MsG0180004388.01.T02 AT5G59150 60.748 107 42 0 9 115 23 129 6.97e-44 143
MsG0180004388.01.T02 AT3G12160 47.143 140 74 0 9 148 77 216 9.02e-44 145
MsG0180004388.01.T02 AT3G46830 60.748 107 42 0 9 115 74 180 1.64e-43 144
MsG0180004388.01.T02 AT3G46830 60.748 107 42 0 9 115 74 180 1.64e-43 144
MsG0180004388.01.T02 AT5G59150 60.748 107 42 0 9 115 74 180 3.94e-43 143
MsG0180004388.01.T02 AT4G18430 50.000 138 65 1 9 146 75 208 1.08e-42 142
MsG0180004388.01.T02 AT1G16920 57.522 113 48 0 9 121 75 187 1.63e-41 139
MsG0180004388.01.T02 AT5G60860 50.000 138 65 1 9 146 75 208 3.65e-41 138
MsG0180004388.01.T02 AT1G09630 49.219 128 63 1 9 136 74 199 1.09e-40 137
MsG0180004388.01.T02 AT4G18800 55.752 113 50 0 9 121 75 187 1.15e-40 137
MsG0180004388.01.T02 AT1G28550 48.551 138 68 1 9 146 75 209 6.11e-40 135
MsG0180004388.01.T02 AT1G18200 48.507 134 64 1 9 137 75 208 7.88e-40 135
MsG0180004388.01.T02 AT1G06400 47.761 134 67 1 9 142 75 205 1.07e-38 132
MsG0180004388.01.T02 AT5G45750 55.046 109 49 0 9 117 75 183 1.35e-38 131
MsG0180004388.01.T02 AT3G15060 46.897 145 70 2 9 153 75 212 1.85e-38 131
MsG0180004388.01.T02 AT1G73640 53.704 108 50 0 9 116 75 182 1.29e-37 129
MsG0180004388.01.T02 AT2G33870 47.101 138 70 1 9 146 75 209 2.23e-37 128
MsG0180004388.01.T02 AT1G01200 51.754 114 52 2 9 119 90 203 1.88e-32 116
MsG0180004388.01.T02 AT4G17160 50.495 101 50 0 9 109 68 168 1.62e-29 108
MsG0180004388.01.T02 AT4G17170 45.872 109 59 0 9 117 68 176 1.83e-28 105
MsG0180004388.01.T02 AT4G35860 47.115 104 54 1 9 111 22 125 4.54e-28 103
MsG0180004388.01.T02 AT4G35860 47.115 104 54 1 9 111 68 171 2.68e-27 102
MsG0180004388.01.T02 AT5G46025 45.794 107 57 1 5 110 2 108 2.82e-26 97.1
MsG0180004388.01.T02 AT3G11730 42.857 112 59 1 9 120 70 176 3.30e-26 99.4
MsG0180004388.01.T02 AT5G03520 46.535 101 53 1 9 108 67 167 3.45e-26 99.4
MsG0180004388.01.T02 AT5G03520 46.535 101 53 1 9 108 77 177 4.25e-26 99.4
MsG0180004388.01.T02 AT1G02130 45.000 100 55 0 9 108 70 169 6.87e-26 98.6
MsG0180004388.01.T02 AT3G09900 45.545 101 54 1 9 108 77 177 8.61e-26 99.0
MsG0180004388.01.T02 AT3G46060 45.283 106 57 1 9 113 77 182 5.78e-25 96.7
MsG0180004388.01.T02 AT3G46060 45.283 106 57 1 9 113 77 182 5.78e-25 96.7
MsG0180004388.01.T02 AT3G46060 45.283 106 57 1 9 113 77 182 5.78e-25 96.7
MsG0180004388.01.T02 AT5G59840 45.545 101 54 1 9 108 77 177 6.93e-25 96.3
MsG0180004388.01.T02 AT3G53610 44.554 101 55 1 9 108 77 177 3.72e-24 94.4
MsG0180004388.01.T02 AT3G53610 44.554 101 55 1 9 108 77 177 3.72e-24 94.4
MsG0180004388.01.T02 AT3G53610 44.554 101 55 1 9 108 77 177 3.72e-24 94.4
MsG0180004388.01.T02 AT3G54840 43.000 100 57 0 9 108 62 161 4.37e-24 93.2
MsG0180004388.01.T02 AT3G54840 43.000 100 57 0 9 108 96 195 9.58e-24 93.2
MsG0180004388.01.T02 AT3G54840 44.211 95 53 0 9 103 96 190 4.78e-23 90.9
MsG0180004388.01.T02 AT5G47200 42.000 100 58 0 9 108 70 169 8.49e-23 90.5
MsG0180004388.01.T02 AT4G17530 42.000 100 58 0 9 108 70 169 9.85e-23 90.5
MsG0180004388.01.T02 AT4G19640 37.963 108 59 1 9 116 72 171 7.48e-22 88.2
MsG0180004388.01.T02 AT5G45130 39.000 100 61 0 9 108 72 171 4.83e-21 85.9
MsG0180004388.01.T02 AT5G45130 39.000 100 61 0 9 108 80 179 7.60e-21 85.5
MsG0180004388.01.T02 AT4G39890 38.144 97 59 1 9 104 71 167 2.33e-18 79.3
MsG0180004388.01.T02 AT5G03530 41.121 107 61 2 9 113 74 180 2.73e-18 79.0
MsG0180004388.01.T02 AT5G03530 41.121 107 61 2 9 113 74 180 2.73e-18 79.0
MsG0180004388.01.T02 AT2G44610 37.500 96 60 0 9 104 71 166 1.55e-17 77.0
MsG0180004388.01.T02 AT1G43890 40.196 102 59 2 9 108 74 175 1.59e-17 77.0
MsG0180004388.01.T02 AT1G43890 40.196 102 59 2 9 108 74 175 1.59e-17 77.0
MsG0180004388.01.T02 AT1G43890 40.196 102 59 2 9 108 74 175 1.59e-17 77.0
MsG0180004388.01.T02 AT3G09910 37.383 107 65 2 9 113 74 180 3.28e-17 75.9
MsG0180004388.01.T02 AT3G09910 37.383 107 65 2 9 113 74 180 3.28e-17 75.9
MsG0180004388.01.T02 AT3G09910 37.383 107 65 2 9 113 74 180 3.28e-17 75.9
MsG0180004388.01.T02 AT5G10260 36.458 96 61 0 9 104 71 166 4.37e-17 75.9
MsG0180004388.01.T02 AT3G09910 33.333 120 78 2 9 126 74 193 7.75e-17 74.7
MsG0180004388.01.T02 AT3G09910 33.333 120 78 2 9 126 74 193 7.75e-17 74.7
MsG0180004388.01.T02 AT5G64990 35.484 93 60 0 9 101 69 161 6.98e-15 69.7
MsG0180004388.01.T02 AT5G64990 35.484 93 60 0 9 101 76 168 7.97e-15 69.7
MsG0180004388.01.T02 AT2G22290 33.333 96 64 0 9 104 71 166 1.33e-14 68.9
MsG0180004388.01.T02 AT4G19640 37.143 70 44 0 9 78 72 141 7.32e-13 63.2
MsG0180004388.01.T02 AT4G19640 36.620 71 45 0 9 79 72 142 1.70e-12 63.2
MsG0180004388.01.T02 AT1G22740 34.286 105 62 2 9 106 70 174 2.07e-11 60.5
MsG0180004388.01.T02 AT4G08190 43.750 64 33 1 38 101 67 127 7.24e-11 57.4

Find 21 sgRNAs with CRISPR-Local

Find 401 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGATTGGGTTTGGAAAAT+TGG 0.154373 1:+77338978 None:intergenic
GAAGGAGGAAAGGGATTGAT+TGG 0.332599 1:+77338964 None:intergenic
GGAAAGGGATTGATTGGGTT+TGG 0.343082 1:+77338970 None:intergenic
TAAAGAGTTGAAGTGTAAGT+TGG 0.375881 1:-77337689 MsG0180004388.01.T01:five_prime_UTR
AAGGAGGAAAGGGATTGATT+GGG 0.465825 1:+77338965 None:intergenic
ACAAGGAGAGAAGTTGTTTG+AGG 0.493218 1:-77337645 MsG0180004388.01.T01:intron
AAGTGTAAGTTGGAGTTCAA+AGG 0.529244 1:-77337679 MsG0180004388.01.T01:five_prime_UTR
TATGCGATTGAAGGAGGAAA+GGG 0.541301 1:+77338955 None:intergenic
AAATCAAATGAGAGAGAGAA+GGG 0.541690 1:+77339011 None:intergenic
CAAATCAAATGAGAGAGAGA+AGG 0.544779 1:+77339010 None:intergenic
TGATGCTGATATGCGATTGA+AGG 0.550236 1:+77338946 None:intergenic
CAAAGGACTGAGGGGAAACA+AGG 0.556341 1:-77337662 MsG0180004388.01.T01:five_prime_UTR
AGCATCATCATTTCATATCA+CGG 0.559041 1:-77338930 MsG0180004388.01.T01:intron
ATATGCGATTGAAGGAGGAA+AGG 0.587575 1:+77338954 None:intergenic
AAATAAATCACATACTAGAA+CGG 0.614465 1:-77339042 MsG0180004388.01.T01:five_prime_UTR
GTTGGAGTTCAAAGGACTGA+GGG 0.629671 1:-77337671 MsG0180004388.01.T01:five_prime_UTR
TAAATCACATACTAGAACGG+TGG 0.638714 1:-77339039 MsG0180004388.01.T01:five_prime_UTR
CTCAAATAATTAATACTCCG+AGG 0.656544 1:-77339090 MsG0180004388.01.T01:five_prime_UTR
TGCTGATATGCGATTGAAGG+AGG 0.673397 1:+77338949 None:intergenic
AGTTGGAGTTCAAAGGACTG+AGG 0.676669 1:-77337672 MsG0180004388.01.T01:five_prime_UTR
TTGGAGTTCAAAGGACTGAG+GGG 0.715065 1:-77337670 MsG0180004388.01.T01:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAAAAATAAAAATAAAAA+AGG + Chr1:77338994-77339013 None:intergenic 0.0%
!!! TTTATTTTTATTTTTAAAAT+CGG - Chr1:77338996-77339015 MsG0180004388.01.T01:five_prime_UTR 0.0%
!! AAAAAAAAAAAAAACGTATA+TGG + Chr1:77337988-77338007 None:intergenic 10.0%
!! ATTATTAATTTATCTATATC+TGG - Chr1:77334198-77334217 MsG0180004388.01.T01:intron 10.0%
!! GTTTGAAAAAAAAAAAAAAA+AGG + Chr1:77335699-77335718 None:intergenic 10.0%
!! TTATTAATTTATCTATATCT+GGG - Chr1:77334199-77334218 MsG0180004388.01.T01:intron 10.0%
!!! AATTTTGTTTATTTACATAT+AGG + Chr1:77337719-77337738 None:intergenic 10.0%
!!! TAATCTTAAGATTTATTTTT+TGG - Chr1:77336972-77336991 MsG0180004388.01.T01:intron 10.0%
!!! TTTTTTTTTTTTTTAAGAAG+GGG - Chr1:77338000-77338019 MsG0180004388.01.T01:intron 10.0%
!! AAATATTAAAAATTGTGGTT+GGG + Chr1:77335329-77335348 None:intergenic 15.0%
!! AAGAATTATGTAAAATTGAA+TGG - Chr1:77336716-77336735 MsG0180004388.01.T01:intron 15.0%
!! AATAAATGTACAAAATTAGT+TGG - Chr1:77333845-77333864 MsG0180004388.01.T01:CDS 15.0%
!! ATATAATAATGAATGAAAGA+TGG + Chr1:77333768-77333787 None:intergenic 15.0%
!! GCTAAAATCATATAAAAAAT+AGG + Chr1:77334372-77334391 None:intergenic 15.0%
!! TAAATATTAAAAATTGTGGT+TGG + Chr1:77335330-77335349 None:intergenic 15.0%
!! TTTATGATACTGAAAATTAA+TGG - Chr1:77337650-77337669 MsG0180004388.01.T01:five_prime_UTR 15.0%
!!! AAAAATGATTTTTCAGATTT+TGG + Chr1:77338942-77338961 None:intergenic 15.0%
!!! ATGATGAAACAAATATTTTT+GGG - Chr1:77335790-77335809 MsG0180004388.01.T01:intron 15.0%
!!! ATTTTTTATATGATTTTAGC+AGG - Chr1:77334372-77334391 MsG0180004388.01.T01:intron 15.0%
!!! TTATAATAAGAACATAGTTT+TGG + Chr1:77338706-77338725 None:intergenic 15.0%
!! AAAGAACAAGAAAAATTTCA+AGG + Chr1:77337558-77337577 None:intergenic 20.0%
!! AAATAAATCACATACTAGAA+CGG - Chr1:77333496-77333515 MsG0180004388.01.T01:three_prime_UTR 20.0%
!! AATAACTATCAACCTTAATT+TGG - Chr1:77335588-77335607 MsG0180004388.01.T01:intron 20.0%
!! AATTTATGGAAATGTATTTC+AGG - Chr1:77336642-77336661 MsG0180004388.01.T01:intron 20.0%
!! ACTCAAAAAATGGAAATTAA+CGG - Chr1:77337338-77337357 MsG0180004388.01.T01:intron 20.0%
!! AGTCTAAGTATATGAAAATA+TGG + Chr1:77337952-77337971 None:intergenic 20.0%
!! ATAGAACAATGAATGAAATT+TGG + Chr1:77333698-77333717 None:intergenic 20.0%
!! ATATACTTAGACTAAAATGA+GGG - Chr1:77337959-77337978 MsG0180004388.01.T01:intron 20.0%
!! ATTTATGGAAATGTATTTCA+GGG - Chr1:77336643-77336662 MsG0180004388.01.T01:intron 20.0%
!! CACATTAATATAATAATTGC+AGG - Chr1:77336291-77336310 MsG0180004388.01.T01:intron 20.0%
!! GTGCTAAATATTAAAAATTG+TGG + Chr1:77335334-77335353 None:intergenic 20.0%
!! TAGAACAATGAATGAAATTT+GGG + Chr1:77333697-77333716 None:intergenic 20.0%
!! TGGTGATAGTTATAAATTTA+TGG - Chr1:77336628-77336647 MsG0180004388.01.T01:intron 20.0%
!!! AAAAACTTTAGAAACTAAGT+TGG + Chr1:77337851-77337870 None:intergenic 20.0%
!!! AAACTTTAGAGATTAAATTG+AGG + Chr1:77337816-77337835 None:intergenic 20.0%
!!! AACTTTAGAGATTAAATTGA+GGG + Chr1:77337815-77337834 None:intergenic 20.0%
!!! AATAAGTTGATAACATTTTC+AGG + Chr1:77335874-77335893 None:intergenic 20.0%
!!! ATACATTTTGACATAATAAC+AGG - Chr1:77334815-77334834 MsG0180004388.01.T01:intron 20.0%
!!! CAATTAAGACAATTTTGAAA+AGG + Chr1:77337224-77337243 None:intergenic 20.0%
!!! CTTTTCAAAATTGTCTTAAT+TGG - Chr1:77337222-77337241 MsG0180004388.01.T01:intron 20.0%
!!! GATGATGAAACAAATATTTT+TGG - Chr1:77335789-77335808 MsG0180004388.01.T01:intron 20.0%
!!! TAATTTCCATTTTTTGAGTT+TGG + Chr1:77337337-77337356 None:intergenic 20.0%
!!! TACATTTTGACATAATAACA+GGG - Chr1:77334816-77334835 MsG0180004388.01.T01:intron 20.0%
!!! TGATGAAACAAATATTTTTG+GGG - Chr1:77335791-77335810 MsG0180004388.01.T01:intron 20.0%
! AAAAATGGAAATTAACGGAA+AGG - Chr1:77337343-77337362 MsG0180004388.01.T01:intron 25.0%
! AAAGTTAATAGACAGGAAAA+TGG - Chr1:77338889-77338908 MsG0180004388.01.T01:intron 25.0%
! AAATCTACAACATATTAAGC+CGG - Chr1:77338530-77338549 MsG0180004388.01.T01:intron 25.0%
! AAGTTTACCATAGTTTATGA+TGG + Chr1:77336485-77336504 None:intergenic 25.0%
! AATAAGTTGCTAGAGAAATA+GGG + Chr1:77336222-77336241 None:intergenic 25.0%
! ACAATAAAACTTTACACTGT+TGG + Chr1:77338138-77338157 None:intergenic 25.0%
! ACTCTTAACACTTAATCATT+GGG + Chr1:77334987-77335006 None:intergenic 25.0%
! AGAACAATGAATGAAATTTG+GGG + Chr1:77333696-77333715 None:intergenic 25.0%
! ATGTACAAAATTAGTTGGAT+TGG - Chr1:77333850-77333869 MsG0180004388.01.T01:CDS 25.0%
! ATTAGGTGATATTCTAGTAT+TGG - Chr1:77337080-77337099 MsG0180004388.01.T01:intron 25.0%
! CATATACTTAGACTAAAATG+AGG - Chr1:77337958-77337977 MsG0180004388.01.T01:intron 25.0%
! CTTAATCAAACCATTAAAAG+AGG - Chr1:77334337-77334356 MsG0180004388.01.T01:intron 25.0%
! CTTTAAGCATTAAATAAGAC+AGG + Chr1:77334757-77334776 None:intergenic 25.0%
! GCATAACAAAAATCAAAGTA+TGG + Chr1:77335654-77335673 None:intergenic 25.0%
! GTGAAGCTAAATTTATTTAG+AGG - Chr1:77334490-77334509 MsG0180004388.01.T01:intron 25.0%
! TAGTAAAATTATACCCAGAA+GGG + Chr1:77336818-77336837 None:intergenic 25.0%
! TATCAAGAATCATGATTCAA+AGG + Chr1:77334702-77334721 None:intergenic 25.0%
! TGAAAAACTGTATGTTTACA+TGG + Chr1:77334171-77334190 None:intergenic 25.0%
! TGAATCAAAGCAAAAACAAA+AGG + Chr1:77338252-77338271 None:intergenic 25.0%
!! ATATCTAAAACATCATGTTC+TGG + Chr1:77336371-77336390 None:intergenic 25.0%
!! CAATAATTTGAGATAGAGAA+GGG - Chr1:77334110-77334129 MsG0180004388.01.T01:CDS 25.0%
!! CTGACAATTTGTTTATAAGT+GGG - Chr1:77335028-77335047 MsG0180004388.01.T01:intron 25.0%
!! TAAGTTCACTCTAAAAAAAC+TGG - Chr1:77335434-77335453 MsG0180004388.01.T01:five_prime_UTR 25.0%
!! TCTGAAAAGTTTGATTCTTT+TGG - Chr1:77336871-77336890 MsG0180004388.01.T01:intron 25.0%
!! TGACAATTTGTTTATAAGTG+GGG - Chr1:77335029-77335048 MsG0180004388.01.T01:intron 25.0%
!! TGTTACTTCTGCATATTATA+GGG - Chr1:77337414-77337433 MsG0180004388.01.T01:intron 25.0%
!! TTCTGGGTATAATTTTACTA+CGG - Chr1:77336818-77336837 MsG0180004388.01.T01:intron 25.0%
!! TTGATTAAGTTTTTCTTGAC+AGG + Chr1:77334326-77334345 None:intergenic 25.0%
!! TTTTCAAACTATTTTATGCG+AGG - Chr1:77335710-77335729 MsG0180004388.01.T01:intron 25.0%
!!! ACTTTGATTTTTGTTATGCT+AGG - Chr1:77335655-77335674 MsG0180004388.01.T01:five_prime_UTR 25.0%
!!! CCAAATAATTTTAGAGTCTT+GGG - Chr1:77336104-77336123 MsG0180004388.01.T01:intron 25.0%
!!! CCAAGACTCTAAAATTATTT+GGG + Chr1:77336106-77336125 None:intergenic 25.0%
!!! TAAAAGGCTCTAAATTTTTC+TGG - Chr1:77336449-77336468 MsG0180004388.01.T01:intron 25.0%
!!! TAAGCAATCTTTGAAGTATA+TGG - Chr1:77337879-77337898 MsG0180004388.01.T01:intron 25.0%
!!! TATATGCTTTTAAGATGCTA+GGG - Chr1:77337917-77337936 MsG0180004388.01.T01:intron 25.0%
!!! TTTTTTTTTTTCCTCATCTC+AGG - Chr1:77334232-77334251 MsG0180004388.01.T01:intron 25.0%
AAACATGTACTCGCATATAT+TGG - Chr1:77338273-77338292 MsG0180004388.01.T01:intron 30.0%
AAATCAAATGAGAGAGAGAA+GGG + Chr1:77333530-77333549 None:intergenic 30.0%
AATTCTACATTGTCCCATAT+GGG + Chr1:77334010-77334029 None:intergenic 30.0%
AGACCTGTATATATAACCAA+AGG + Chr1:77334733-77334752 None:intergenic 30.0%
AGAGTTCCAAACTCAAAAAA+TGG - Chr1:77337328-77337347 MsG0180004388.01.T01:intron 30.0%
AGCATCATCATTTCATATCA+CGG - Chr1:77333608-77333627 MsG0180004388.01.T01:three_prime_UTR 30.0%
AGGACCATATAAGTACTATA+AGG + Chr1:77337699-77337718 None:intergenic 30.0%
AGTAACTGCCTAATAATAGT+AGG - Chr1:77336323-77336342 MsG0180004388.01.T01:intron 30.0%
ATACTAAAACTGATGCTTTC+AGG - Chr1:77336845-77336864 MsG0180004388.01.T01:intron 30.0%
ATAGACTTCAAAATCCCATA+TGG - Chr1:77333993-77334012 MsG0180004388.01.T01:CDS 30.0%
ATGTGCAACAGTTATCTATT+AGG + Chr1:77336276-77336295 None:intergenic 30.0%
ATTAGGATAAAATTCATCCC+TGG + Chr1:77337288-77337307 None:intergenic 30.0%
ATTGATTGGGTTTGGAAAAT+TGG + Chr1:77333563-77333582 None:intergenic 30.0%
CAAAAACTACAAAAGAAAGC+TGG + Chr1:77337034-77337053 None:intergenic 30.0%
CAAAAGTCTTTCTCTCATTA+AGG + Chr1:77334435-77334454 None:intergenic 30.0%
CATTCATCCATCATAAACTA+TGG - Chr1:77336475-77336494 MsG0180004388.01.T01:intron 30.0%
CCACTTATAAACAAATTGTC+AGG + Chr1:77335030-77335049 None:intergenic 30.0%
CCATTAAACTTACCCAAAAA+GGG + Chr1:77337676-77337695 None:intergenic 30.0%
CCTAATTCAAAGTCAACTAT+AGG - Chr1:77337302-77337321 MsG0180004388.01.T01:intron 30.0%
CCTTCTCTATCTCAAATTAT+TGG + Chr1:77334112-77334131 None:intergenic 30.0%
CTCAAATAATTAATACTCCG+AGG - Chr1:77333448-77333467 MsG0180004388.01.T01:three_prime_UTR 30.0%
CTTCGTTAAAACACGATAAA+AGG + Chr1:77335758-77335777 None:intergenic 30.0%
CTTGCGAAGAAATCAAAAAA+AGG + Chr1:77334786-77334805 None:intergenic 30.0%
CTTTAGTAGTGTTAGTTACA+TGG - Chr1:77334651-77334670 MsG0180004388.01.T01:intron 30.0%
GAACAATGAATGAAATTTGG+GGG + Chr1:77333695-77333714 None:intergenic 30.0%
GAATAAGTTGCTAGAGAAAT+AGG + Chr1:77336223-77336242 None:intergenic 30.0%
GACTCTTAACACTTAATCAT+TGG + Chr1:77334988-77335007 None:intergenic 30.0%
GCAAACAGATTTCCAAATTA+AGG + Chr1:77335603-77335622 None:intergenic 30.0%
GTAGTAAAATTATACCCAGA+AGG + Chr1:77336819-77336838 None:intergenic 30.0%
GTGTTCAATTAATGAAACTG+CGG + Chr1:77338863-77338882 None:intergenic 30.0%
GTTACTTCTGCATATTATAG+GGG - Chr1:77337415-77337434 MsG0180004388.01.T01:intron 30.0%
TAAAGAGTTGAAGTGTAAGT+TGG - Chr1:77334849-77334868 MsG0180004388.01.T01:intron 30.0%
TAATTCTACATTGTCCCATA+TGG + Chr1:77334011-77334030 None:intergenic 30.0%
TACATGTACACACATATTGA+TGG - Chr1:77338217-77338236 MsG0180004388.01.T01:intron 30.0%
TAGACTTCAAAATCCCATAT+GGG - Chr1:77333994-77334013 MsG0180004388.01.T01:CDS 30.0%
TAGATATAAACTTCTGCAGA+AGG + Chr1:77334940-77334959 None:intergenic 30.0%
TATCACCTAATATGAGAACA+AGG + Chr1:77337071-77337090 None:intergenic 30.0%
TATGTACTCGTAACAAGTTA+GGG + Chr1:77333811-77333830 None:intergenic 30.0%
TCAAACCATTAAAAGAGGTT+TGG - Chr1:77334342-77334361 MsG0180004388.01.T01:intron 30.0%
TCAACAATAAACAACCATCA+TGG + Chr1:77337119-77337138 None:intergenic 30.0%
TCATTGATCTAACCATAACT+GGG - Chr1:77335537-77335556 MsG0180004388.01.T01:intron 30.0%
TCTTGTTCTTTCTATGTTTG+AGG - Chr1:77337567-77337586 MsG0180004388.01.T01:intron 30.0%
TGATACCATATTAGAAATCG+TGG + Chr1:77335102-77335121 None:intergenic 30.0%
TGATCTTAATGTTTGCTCAA+AGG - Chr1:77338769-77338788 MsG0180004388.01.T01:intron 30.0%
TTCAAAGGAGATGATTTCTA+TGG + Chr1:77334687-77334706 None:intergenic 30.0%
TTCATTGATCTAACCATAAC+TGG - Chr1:77335536-77335555 MsG0180004388.01.T01:intron 30.0%
TTGCAAGATCTGTACTTTAT+TGG - Chr1:77336608-77336627 MsG0180004388.01.T01:intron 30.0%
TTGCCTTTGGTTATATATAC+AGG - Chr1:77334727-77334746 MsG0180004388.01.T01:intron 30.0%
TTGTTCACACGTAATATGTT+AGG + Chr1:77339062-77339081 None:intergenic 30.0%
TTTCTCACTAAACTTGACAT+TGG - Chr1:77337611-77337630 MsG0180004388.01.T01:intron 30.0%
! AATGTCAGTAGGCATTTTAT+TGG + Chr1:77336187-77336206 None:intergenic 30.0%
! AGTTTGATTCTTTTGGACAA+AGG - Chr1:77336878-77336897 MsG0180004388.01.T01:intron 30.0%
! ATCATGTGTGAGTAACATTT+TGG - Chr1:77336513-77336532 MsG0180004388.01.T01:intron 30.0%
! ATGTCAGTAGGCATTTTATT+GGG + Chr1:77336186-77336205 None:intergenic 30.0%
! ATGTTTGCTCAAAGGAATTT+TGG - Chr1:77338777-77338796 MsG0180004388.01.T01:intron 30.0%
! CCAATAATTTGAGATAGAGA+AGG - Chr1:77334109-77334128 MsG0180004388.01.T01:CDS 30.0%
! CCTATAGTTGACTTTGAATT+AGG + Chr1:77337305-77337324 None:intergenic 30.0%
! CCTGACAATTTGTTTATAAG+TGG - Chr1:77335027-77335046 MsG0180004388.01.T01:intron 30.0%
! CTGTTACTTCTGCATATTAT+AGG - Chr1:77337413-77337432 MsG0180004388.01.T01:intron 30.0%
! GAAAATTAATGGCCCTTTTT+GGG - Chr1:77337661-77337680 MsG0180004388.01.T01:five_prime_UTR 30.0%
! GACAATTTGTTTATAAGTGG+GGG - Chr1:77335030-77335049 MsG0180004388.01.T01:intron 30.0%
! GGCTAATGGTTTACTATTTT+AGG - Chr1:77338096-77338115 MsG0180004388.01.T01:intron 30.0%
! TATGTTTGAGGTAAATGATC+AGG - Chr1:77337579-77337598 MsG0180004388.01.T01:intron 30.0%
! TGAAAATTAATGGCCCTTTT+TGG - Chr1:77337660-77337679 MsG0180004388.01.T01:five_prime_UTR 30.0%
! TGTGAAGAAAAGAAGCATAA+AGG + Chr1:77335909-77335928 None:intergenic 30.0%
! TTCACTCTAAAAAAACTGGT+GGG - Chr1:77335438-77335457 MsG0180004388.01.T01:five_prime_UTR 30.0%
! TTGCCAACAAATGTTTTTCA+GGG - Chr1:77335405-77335424 MsG0180004388.01.T01:five_prime_UTR 30.0%
! TTTAGCTTCACAGACTAAAA+AGG + Chr1:77334481-77334500 None:intergenic 30.0%
! TTTGCCAACAAATGTTTTTC+AGG - Chr1:77335404-77335423 MsG0180004388.01.T01:five_prime_UTR 30.0%
!! ATGGCCTTATAGTACTTATA+TGG - Chr1:77337692-77337711 MsG0180004388.01.T01:five_prime_UTR 30.0%
!! CCCAAGACTCTAAAATTATT+TGG + Chr1:77336107-77336126 None:intergenic 30.0%
!! GGTATAAGTTTTATCTGCAA+AGG + Chr1:77336789-77336808 None:intergenic 30.0%
!!! AGACTTTTGTTTGTTGTTGA+AGG - Chr1:77334446-77334465 MsG0180004388.01.T01:intron 30.0%
!!! AGAGCCTTTTAATTTTGTGA+GGG + Chr1:77336440-77336459 None:intergenic 30.0%
!!! CCCAAATAATTTTAGAGTCT+TGG - Chr1:77336103-77336122 MsG0180004388.01.T01:intron 30.0%
!!! CTTTTATCGTGTTTTAACGA+AGG - Chr1:77335756-77335775 MsG0180004388.01.T01:intron 30.0%
!!! GAATTTTGGAGTAGAAATTG+TGG - Chr1:77338791-77338810 MsG0180004388.01.T01:intron 30.0%
!!! GTATATGCTTTTAAGATGCT+AGG - Chr1:77337916-77337935 MsG0180004388.01.T01:intron 30.0%
!!! GTTGATAACATTTTCAGGAA+TGG + Chr1:77335869-77335888 None:intergenic 30.0%
!!! TAGAGCCTTTTAATTTTGTG+AGG + Chr1:77336441-77336460 None:intergenic 30.0%
!!! TTTTATTGGGGACTAGTTAT+TGG + Chr1:77336173-77336192 None:intergenic 30.0%
AAACTACAAAAGAAAGCTGG+AGG + Chr1:77337031-77337050 None:intergenic 35.0%
AACGTTGTCACAATACTTGT+TGG - Chr1:77338364-77338383 MsG0180004388.01.T01:intron 35.0%
ACCATATTAGAAATCGTGGT+TGG + Chr1:77335098-77335117 None:intergenic 35.0%
ACCATTAAAAGAGGTTTGGA+TGG - Chr1:77334346-77334365 MsG0180004388.01.T01:intron 35.0%
ACGTTGTCACAATACTTGTT+GGG - Chr1:77338365-77338384 MsG0180004388.01.T01:intron 35.0%
ACTGTTGTTCTACAACAAGA+AGG - Chr1:77338613-77338632 MsG0180004388.01.T01:intron 35.0%
AGTAGCCATATGATAGAAAC+TGG - Chr1:77336038-77336057 MsG0180004388.01.T01:intron 35.0%
AGTGATACTTCAAAGGCTAA+TGG - Chr1:77338082-77338101 MsG0180004388.01.T01:intron 35.0%
ATAACACCTCAACGTATTAC+AGG + Chr1:77335985-77336004 None:intergenic 35.0%
ATAATGAAGAGAGAAGACAG+AGG - Chr1:77337194-77337213 MsG0180004388.01.T01:intron 35.0%
ATACCTTATGAAGCAACAGT+TGG + Chr1:77336944-77336963 None:intergenic 35.0%
ATCAATCCTGAATAACCTAG+CGG + Chr1:77338753-77338772 None:intergenic 35.0%
ATGTCGAAGAATAACAAGAC+TGG + Chr1:77338198-77338217 None:intergenic 35.0%
CAAATCAAATGAGAGAGAGA+AGG + Chr1:77333531-77333550 None:intergenic 35.0%
CCATATTAGAAATCGTGGTT+GGG + Chr1:77335097-77335116 None:intergenic 35.0%
CCTGCAAAAAGTTAATAGAC+AGG - Chr1:77338882-77338901 MsG0180004388.01.T01:intron 35.0%
CTGATCCTTGTTCTCATATT+AGG - Chr1:77337063-77337082 MsG0180004388.01.T01:intron 35.0%
CTGTTGTTCTACAACAAGAA+GGG - Chr1:77338614-77338633 MsG0180004388.01.T01:intron 35.0%
CTTCCCCTCACAAAATTAAA+AGG - Chr1:77336433-77336452 MsG0180004388.01.T01:intron 35.0%
GAAATGATGATTAAGTGCAC+TGG - Chr1:77338312-77338331 MsG0180004388.01.T01:intron 35.0%
GAGTAAACTGAAATTTGAGC+AGG + Chr1:77333724-77333743 None:intergenic 35.0%
GCACTTCAAGCACAATTAAA+AGG - Chr1:77338816-77338835 MsG0180004388.01.T01:intron 35.0%
GCCATTAAACTTACCCAAAA+AGG + Chr1:77337677-77337696 None:intergenic 35.0%
GTATGTACTCGTAACAAGTT+AGG + Chr1:77333812-77333831 None:intergenic 35.0%
GTGTTAGGCCTACTATTATT+AGG + Chr1:77336334-77336353 None:intergenic 35.0%
TAAACAACCATCATGGATTC+TGG + Chr1:77337112-77337131 None:intergenic 35.0%
TAAATCACATACTAGAACGG+TGG - Chr1:77333499-77333518 MsG0180004388.01.T01:three_prime_UTR 35.0%
TAACACCTCAACGTATTACA+GGG + Chr1:77335984-77336003 None:intergenic 35.0%
TAATCTACACTCCTAACCAA+TGG + Chr1:77334076-77334095 None:intergenic 35.0%
TACAGAATAAAATCGCCTCA+AGG + Chr1:77337760-77337779 None:intergenic 35.0%
TACCTTATGAAGCAACAGTT+GGG + Chr1:77336943-77336962 None:intergenic 35.0%
TAGAGAAATAGGGAATCTGA+AGG + Chr1:77336212-77336231 None:intergenic 35.0%
TCCCAGATATAAAGCCATTT+GGG - Chr1:77334571-77334590 MsG0180004388.01.T01:intron 35.0%
TCTTGAGTCGAATCTCTAAA+AGG + Chr1:77335356-77335375 None:intergenic 35.0%
TCTTGATATTGTCTTGCCTT+TGG - Chr1:77334714-77334733 MsG0180004388.01.T01:intron 35.0%
TGAAGAGAGTGATACTTCAA+AGG - Chr1:77338075-77338094 MsG0180004388.01.T01:intron 35.0%
TGAAGCGTGAACATAAATGA+CGG + Chr1:77335180-77335199 None:intergenic 35.0%
TGGTACCAGTTTCTATCATA+TGG + Chr1:77336046-77336065 None:intergenic 35.0%
TGTTATCAGGTTTCCGTTAT+CGG - Chr1:77335149-77335168 MsG0180004388.01.T01:CDS 35.0%
TGTTGTTCTACAACAAGAAG+GGG - Chr1:77338615-77338634 MsG0180004388.01.T01:intron 35.0%
! AAAGGGTTGTTGTTCGAAAT+AGG - Chr1:77338662-77338681 MsG0180004388.01.T01:intron 35.0%
! AAGTGTAAGTTGGAGTTCAA+AGG - Chr1:77334859-77334878 MsG0180004388.01.T01:intron 35.0%
! AGCATATAGAACCATTGGTT+AGG - Chr1:77334062-77334081 MsG0180004388.01.T01:CDS 35.0%
! AGTCTTTCCATTTTCAATCC+AGG + Chr1:77338596-77338615 None:intergenic 35.0%
! CCTGTCTATTAACTTTTTGC+AGG + Chr1:77338885-77338904 None:intergenic 35.0%
! GTTCACTCTAAAAAAACTGG+TGG - Chr1:77335437-77335456 MsG0180004388.01.T01:five_prime_UTR 35.0%
! TAATTGGTGATTCAGCTGTT+GGG - Chr1:77337238-77337257 MsG0180004388.01.T01:intron 35.0%
! TAGGAGTGTAGATTAGATAG+AGG - Chr1:77334081-77334100 MsG0180004388.01.T01:CDS 35.0%
! TCTAAAACATCATGTTCTGG+AGG + Chr1:77336368-77336387 None:intergenic 35.0%
! TGTCAGTAGGCATTTTATTG+GGG + Chr1:77336185-77336204 None:intergenic 35.0%
! TTAATTGGTGATTCAGCTGT+TGG - Chr1:77337237-77337256 MsG0180004388.01.T01:intron 35.0%
!! ACCCAAATGGCTTTATATCT+GGG + Chr1:77334575-77334594 None:intergenic 35.0%
!! GAGTAACATTTTGGCACTAA+GGG - Chr1:77336522-77336541 MsG0180004388.01.T01:intron 35.0%
!! TGAGTAACATTTTGGCACTA+AGG - Chr1:77336521-77336540 MsG0180004388.01.T01:intron 35.0%
!! TGCCAACAAATGTTTTTCAG+GGG - Chr1:77335406-77335425 MsG0180004388.01.T01:five_prime_UTR 35.0%
!!! CCCTTTTTGGGTAAGTTTAA+TGG - Chr1:77337673-77337692 MsG0180004388.01.T01:five_prime_UTR 35.0%
!!! GAGCCTTTTAATTTTGTGAG+GGG + Chr1:77336439-77336458 None:intergenic 35.0%
!!! TCATTTTTTTCCCTGGCATA+CGG + Chr1:77336008-77336027 None:intergenic 35.0%
AAAATGCCGCTAGGTTATTC+AGG - Chr1:77338744-77338763 MsG0180004388.01.T01:intron 40.0%
AAGGAGGAAAGGGATTGATT+GGG + Chr1:77333576-77333595 None:intergenic 40.0%
AATTATACCCAGAAGGGAAG+AGG + Chr1:77336812-77336831 None:intergenic 40.0%
ACAAGGAGAGAAGTTGTTTG+AGG - Chr1:77334893-77334912 MsG0180004388.01.T01:intron 40.0%
ACATGACCAAAAAGCGGATA+AGG + Chr1:77336589-77336608 None:intergenic 40.0%
AGCACCAAAGTTTATGATGC+AGG + Chr1:77334606-77334625 None:intergenic 40.0%
AGGAAGTTAAAGCGCAGATA+TGG - Chr1:77337363-77337382 MsG0180004388.01.T01:intron 40.0%
ATATGCGATTGAAGGAGGAA+AGG + Chr1:77333587-77333606 None:intergenic 40.0%
ATCTGAAGGACAATGTCAGT+AGG + Chr1:77336198-77336217 None:intergenic 40.0%
ATGACCAAAAAGCGGATAAG+GGG + Chr1:77336587-77336606 None:intergenic 40.0%
ATGTTTACATGGTGTCTGTG+TGG + Chr1:77334160-77334179 None:intergenic 40.0%
ATTATACCCAGAAGGGAAGA+GGG + Chr1:77336811-77336830 None:intergenic 40.0%
ATTTACTCGCAAGATTTGCC+AGG - Chr1:77337267-77337286 MsG0180004388.01.T01:intron 40.0%
CATGACCAAAAAGCGGATAA+GGG + Chr1:77336588-77336607 None:intergenic 40.0%
CATGTACTCGCATATATTGG+TGG - Chr1:77338276-77338295 MsG0180004388.01.T01:intron 40.0%
CCCAACCACGATTTCTAATA+TGG - Chr1:77335094-77335113 MsG0180004388.01.T01:CDS 40.0%
CCTCAAGGAAAAGAATGAAG+AGG + Chr1:77337745-77337764 None:intergenic 40.0%
CTACAACATATTAAGCCGGA+AGG - Chr1:77338534-77338553 MsG0180004388.01.T01:intron 40.0%
CTTGAGACATCATAACCTTC+CGG + Chr1:77338552-77338571 None:intergenic 40.0%
CTTGCAACATGACCAAAAAG+CGG + Chr1:77336595-77336614 None:intergenic 40.0%
GAAGCGTGAACATAAATGAC+GGG + Chr1:77335179-77335198 None:intergenic 40.0%
GATGCTTCCTGGATTGAAAA+TGG - Chr1:77338586-77338605 MsG0180004388.01.T01:intron 40.0%
GCACCAAAGTTTATGATGCA+GGG + Chr1:77334605-77334624 None:intergenic 40.0%
GCTTGAGCATATAGAACCAT+TGG - Chr1:77334057-77334076 MsG0180004388.01.T01:CDS 40.0%
GGAAGTTAAAGCGCAGATAT+GGG - Chr1:77337364-77337383 MsG0180004388.01.T01:intron 40.0%
GGAAGTTCAATAACCTTCGT+TGG - Chr1:77335812-77335831 MsG0180004388.01.T01:intron 40.0%
GTCCCAGATATAAAGCCATT+TGG - Chr1:77334570-77334589 MsG0180004388.01.T01:intron 40.0%
GTCCCCTGAAAAACATTTGT+TGG + Chr1:77335411-77335430 None:intergenic 40.0%
GTCTTTCTCTCATTAAGGTC+AGG + Chr1:77334430-77334449 None:intergenic 40.0%
GTTATCAGGTTTCCGTTATC+GGG - Chr1:77335150-77335169 MsG0180004388.01.T01:CDS 40.0%
TAGGAAGCAGTTACGTTTCT+TGG + Chr1:77336257-77336276 None:intergenic 40.0%
TATGCGATTGAAGGAGGAAA+GGG + Chr1:77333586-77333605 None:intergenic 40.0%
TCAAGAAAGATGATGCTTCC+TGG - Chr1:77338575-77338594 MsG0180004388.01.T01:intron 40.0%
TCACCCTGCATCATAAACTT+TGG - Chr1:77334599-77334618 MsG0180004388.01.T01:intron 40.0%
TCTTCACATATGCAACCTCA+AGG - Chr1:77335921-77335940 MsG0180004388.01.T01:intron 40.0%
TGATGCTGATATGCGATTGA+AGG + Chr1:77333595-77333614 None:intergenic 40.0%
TGGGAACAAGTCAGATCTTA+AGG - Chr1:77338384-77338403 MsG0180004388.01.T01:intron 40.0%
TTAAGGTCAGGTAAGCTACA+AGG + Chr1:77334418-77334437 None:intergenic 40.0%
TTCAGACATGAGATCCCTTT+GGG + Chr1:77334547-77334566 None:intergenic 40.0%
TTCTGGTATATGACATCAGC+AGG - Chr1:77337452-77337471 MsG0180004388.01.T01:intron 40.0%
TTTACTCGCAAGATTTGCCA+GGG - Chr1:77337268-77337287 MsG0180004388.01.T01:intron 40.0%
! AATAACCTAGCGGCATTTTC+AGG + Chr1:77338743-77338762 None:intergenic 40.0%
! CCTCTTCATTCTTTTCCTTG+AGG - Chr1:77337742-77337761 MsG0180004388.01.T01:intron 40.0%
! CGTCAAACGTTTGATAGCAT+TGG - Chr1:77337475-77337494 MsG0180004388.01.T01:intron 40.0%
! CTAGTTATTGGTTGGGAGAA+CGG + Chr1:77336161-77336180 None:intergenic 40.0%
! GATTCTTTTGGACAAAGGTC+TGG - Chr1:77336883-77336902 MsG0180004388.01.T01:intron 40.0%
! GCCATCCAAACCTCTTTTAA+TGG + Chr1:77334350-77334369 None:intergenic 40.0%
! GGCACAAGGTTTGTTCTTTA+TGG - Chr1:77338450-77338469 MsG0180004388.01.T01:intron 40.0%
!! ATATCCCCTTATCCGCTTTT+TGG - Chr1:77336580-77336599 MsG0180004388.01.T01:intron 40.0%
!! ATTGGGGACTAGTTATTGGT+TGG + Chr1:77336169-77336188 None:intergenic 40.0%
!! CACCCAAATGGCTTTATATC+TGG + Chr1:77334576-77334595 None:intergenic 40.0%
!! GATAACGGAAACCTGATAAC+AGG + Chr1:77335150-77335169 None:intergenic 40.0%
!! GTTGATTTGTTTCTACCCAC+CGG - Chr1:77337134-77337153 MsG0180004388.01.T01:intron 40.0%
!! TTGGGGACTAGTTATTGGTT+GGG + Chr1:77336168-77336187 None:intergenic 40.0%
!!! AGTGCTGTCATTTTTTTCCC+TGG + Chr1:77336015-77336034 None:intergenic 40.0%
!!! ATTTTGAAGTCTATCCCTCG+AGG + Chr1:77333987-77334006 None:intergenic 40.0%
AAACACACTCAGCATGAGTG+TGG + Chr1:77334262-77334281 None:intergenic 45.0%
AACCTTCGTTGGAAGACTTC+TGG - Chr1:77335823-77335842 MsG0180004388.01.T01:intron 45.0%
AACGGAAACCTGATAACAGG+TGG + Chr1:77335147-77335166 None:intergenic 45.0%
ACCAAGCTCTCATTCTTGGA+TGG + Chr1:77336135-77336154 None:intergenic 45.0%
AGAGCCTCTTCACGATTCTT+GGG - Chr1:77335121-77335140 MsG0180004388.01.T01:CDS 45.0%
AGATCTTAAGGATGCGAGAG+AGG - Chr1:77338396-77338415 MsG0180004388.01.T01:intron 45.0%
AGCAGAAGGGGAGACAAAAA+GGG - Chr1:77338645-77338664 MsG0180004388.01.T01:intron 45.0%
AGCTTGACTTTGTAACCTCG+AGG - Chr1:77333969-77333988 MsG0180004388.01.T01:CDS 45.0%
AGTGTGGTTAACCTGAGATG+AGG + Chr1:77334246-77334265 None:intergenic 45.0%
AGTTGGAGTTCAAAGGACTG+AGG - Chr1:77334866-77334885 MsG0180004388.01.T01:intron 45.0%
ATCCAGAAGTCTTCCAACGA+AGG + Chr1:77335828-77335847 None:intergenic 45.0%
ATCTAACCATAACTGGGCTG+TGG - Chr1:77335543-77335562 MsG0180004388.01.T01:intron 45.0%
ATGTGTAATCCTGAGCGTGA+GGG - Chr1:77335201-77335220 MsG0180004388.01.T01:five_prime_UTR 45.0%
CCTAACACAACCCCACAAAA+CGG + Chr1:77335074-77335093 None:intergenic 45.0%
CGACATCATCACATTCGTTC+TGG - Chr1:77333908-77333927 MsG0180004388.01.T01:CDS 45.0%
CTAACACAACCCCACAAAAC+CGG + Chr1:77335073-77335092 None:intergenic 45.0%
CTTCAGACATGAGATCCCTT+TGG + Chr1:77334548-77334567 None:intergenic 45.0%
GAAGGAGGAAAGGGATTGAT+TGG + Chr1:77333577-77333596 None:intergenic 45.0%
GAGAAAGCCAGAATCCATGA+TGG - Chr1:77337102-77337121 MsG0180004388.01.T01:intron 45.0%
GAGAACCAAGCTCTCATTCT+TGG + Chr1:77336139-77336158 None:intergenic 45.0%
GATCCCTTTGGGCATGAAAA+CGG + Chr1:77334536-77334555 None:intergenic 45.0%
GCTTGACTTTGTAACCTCGA+GGG - Chr1:77333970-77333989 MsG0180004388.01.T01:CDS 45.0%
GGAAAGGGATTGATTGGGTT+TGG + Chr1:77333571-77333590 None:intergenic 45.0%
GTGTGTTAAGAGTCCCACAT+CGG - Chr1:77335224-77335243 MsG0180004388.01.T01:five_prime_UTR 45.0%
GTTAAGAGTCCCACATCGTT+AGG - Chr1:77334998-77335017 MsG0180004388.01.T01:intron 45.0%
GTTGGAGTTCAAAGGACTGA+GGG - Chr1:77334867-77334886 MsG0180004388.01.T01:intron 45.0%
TATGCAACCTCAAGGTGGAA+AGG - Chr1:77335929-77335948 MsG0180004388.01.T01:intron 45.0%
TCACATATGCAACCTCAAGG+TGG - Chr1:77335924-77335943 MsG0180004388.01.T01:intron 45.0%
TCCATCCAAGAATGAGAGCT+TGG - Chr1:77336131-77336150 MsG0180004388.01.T01:intron 45.0%
TCTAACCATAACTGGGCTGT+GGG - Chr1:77335544-77335563 MsG0180004388.01.T01:intron 45.0%
TGCTGATATGCGATTGAAGG+AGG + Chr1:77333592-77333611 None:intergenic 45.0%
TTATACCCAGAAGGGAAGAG+GGG + Chr1:77336810-77336829 None:intergenic 45.0%
TTATACCCCTCTTCCCTTCT+GGG - Chr1:77336802-77336821 MsG0180004388.01.T01:intron 45.0%
TTGGAGTTCAAAGGACTGAG+GGG - Chr1:77334868-77334887 MsG0180004388.01.T01:intron 45.0%
TTTGGGCATGAAAACGGACA+AGG + Chr1:77334530-77334549 None:intergenic 45.0%
! CACCCAACTGTTGCTTCATA+AGG - Chr1:77336938-77336957 MsG0180004388.01.T01:intron 45.0%
! TGTCCGTTTTCATGCCCAAA+GGG - Chr1:77334530-77334549 MsG0180004388.01.T01:intron 45.0%
! TGTGGGAAGTGACTTTTTGC+AGG - Chr1:77335561-77335580 MsG0180004388.01.T01:intron 45.0%
! TTAAGAGTCCCACATCGGTT+AGG - Chr1:77335229-77335248 MsG0180004388.01.T01:five_prime_UTR 45.0%
! TTGTCCGTTTTCATGCCCAA+AGG - Chr1:77334529-77334548 MsG0180004388.01.T01:intron 45.0%
!! AACATCATGTTCTGGAGGAG+AGG + Chr1:77336363-77336382 None:intergenic 45.0%
!! ACATCATGTTCTGGAGGAGA+GGG + Chr1:77336362-77336381 None:intergenic 45.0%
!! CGTTTGATAGCATTGGTCGA+TGG - Chr1:77337482-77337501 MsG0180004388.01.T01:intron 45.0%
!! TATACCAGAAGTGCTCCAAC+TGG + Chr1:77337442-77337461 None:intergenic 45.0%
!!! ATTAATATTAATTTGTATTT+TGG + Chr1:77336066-77336085 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTTAAGAA+GGG - Chr1:77337999-77338018 MsG0180004388.01.T01:intron 5.0%
!!! TTTTTTTTTTTTTTTTAAGA+AGG - Chr1:77337998-77338017 MsG0180004388.01.T01:intron 5.0%
AAAGGTCTGGATGCTGATGG+TGG - Chr1:77336896-77336915 MsG0180004388.01.T01:intron 50.0%
AAGCTGCAAGCTTGATGCAG+AGG + Chr1:77335518-77335537 None:intergenic 50.0%
AAGGCACACAAGGAACCCAT+GGG - Chr1:77335948-77335967 MsG0180004388.01.T01:intron 50.0%
AAGGGGATCGATCAGCAGAA+GGG - Chr1:77338632-77338651 MsG0180004388.01.T01:intron 50.0%
ACAAAACGGCTTGTGAGGTG+AGG + Chr1:77335060-77335079 None:intergenic 50.0%
ACCGGAAAGTCAGCAACTCT+TGG - Chr1:77337152-77337171 MsG0180004388.01.T01:intron 50.0%
AGCCACCCTGTAATACGTTG+AGG - Chr1:77335976-77335995 MsG0180004388.01.T01:intron 50.0%
AGCTGCAAGCTTGATGCAGA+GGG + Chr1:77335517-77335536 None:intergenic 50.0%
AGGCCAACTCCTAACGATGT+GGG + Chr1:77335010-77335029 None:intergenic 50.0%
AGTCCCACATCGTTAGGAGT+TGG - Chr1:77335004-77335023 MsG0180004388.01.T01:intron 50.0%
CAAAGGACTGAGGGGAAACA+AGG - Chr1:77334876-77334895 MsG0180004388.01.T01:intron 50.0%
CAACTCTTGGGACTCACAGA+TGG - Chr1:77337165-77337184 MsG0180004388.01.T01:intron 50.0%
CACCTCAACGTATTACAGGG+TGG + Chr1:77335981-77336000 None:intergenic 50.0%
CAGAGCCTCTTCACGATTCT+TGG - Chr1:77335120-77335139 MsG0180004388.01.T01:CDS 50.0%
CAGCAGAAGGGGAGACAAAA+AGG - Chr1:77338644-77338663 MsG0180004388.01.T01:intron 50.0%
CATGAAAACGGACAAGGCAG+AGG + Chr1:77334524-77334543 None:intergenic 50.0%
CCAAACCTGAAAATGCCGCT+AGG - Chr1:77338735-77338754 MsG0180004388.01.T01:intron 50.0%
CCGGAAAGTCAGCAACTCTT+GGG - Chr1:77337153-77337172 MsG0180004388.01.T01:intron 50.0%
CTTATACCCCTCTTCCCTTC+TGG - Chr1:77336801-77336820 MsG0180004388.01.T01:intron 50.0%
GACAAAGGTCTGGATGCTGA+TGG - Chr1:77336893-77336912 MsG0180004388.01.T01:intron 50.0%
GAGGAGAGGGATATGGTGTT+AGG + Chr1:77336349-77336368 None:intergenic 50.0%
GATGTGTAATCCTGAGCGTG+AGG - Chr1:77335200-77335219 MsG0180004388.01.T01:five_prime_UTR 50.0%
GCAGGGTGAAATCACCCAAA+TGG + Chr1:77334588-77334607 None:intergenic 50.0%
TGTGTAATCCTGAGCGTGAG+GGG - Chr1:77335202-77335221 MsG0180004388.01.T01:five_prime_UTR 50.0%
TTCTTGGGCCACCTGTTATC+AGG - Chr1:77335136-77335155 MsG0180004388.01.T01:CDS 50.0%
TTGTGTGCCTTTCCACCTTG+AGG + Chr1:77335939-77335958 None:intergenic 50.0%
! AAAGGCACACAAGGAACCCA+TGG - Chr1:77335947-77335966 MsG0180004388.01.T01:intron 50.0%
! ACCAGTGAGTTGACACCACA+TGG + Chr1:77333946-77333965 None:intergenic 50.0%
! CCGTTTTGTGGGGTTGTGTT+AGG - Chr1:77335071-77335090 MsG0180004388.01.T01:CDS 50.0%
! CTTTTCTTTGCGTTGCGCCT+CGG + Chr1:77333468-77333487 None:intergenic 50.0%
! GAGGTGTTATCCGTATGCCA+GGG - Chr1:77335995-77336014 MsG0180004388.01.T01:intron 50.0%
! GCGTGAACATAAATGACGGG+TGG + Chr1:77335176-77335195 None:intergenic 50.0%
! GTGAGTTGACACCACATGGA+CGG + Chr1:77333942-77333961 None:intergenic 50.0%
! TCAAGGTGGAAAGGCACACA+AGG - Chr1:77335938-77335957 MsG0180004388.01.T01:intron 50.0%
! TCCATGTGGTGTCAACTCAC+TGG - Chr1:77333942-77333961 MsG0180004388.01.T01:CDS 50.0%
! TGAGGTGTTATCCGTATGCC+AGG - Chr1:77335994-77336013 MsG0180004388.01.T01:intron 50.0%
!! AAGAGTTGCTGACTTTCCGG+TGG + Chr1:77337153-77337172 None:intergenic 50.0%
!! ACCTCACAAGCCGGTTTTGT+GGG - Chr1:77335292-77335311 MsG0180004388.01.T01:five_prime_UTR 50.0%
!! ACCTCACAAGCCGTTTTGTG+GGG - Chr1:77335061-77335080 MsG0180004388.01.T01:CDS 50.0%
!! AGAGTTGCTGACTTTCCGGT+GGG + Chr1:77337152-77337171 None:intergenic 50.0%
!! CACCTCACAAGCCGTTTTGT+GGG - Chr1:77335060-77335079 MsG0180004388.01.T01:CDS 50.0%
!! CCCAAGAGTTGCTGACTTTC+CGG + Chr1:77337156-77337175 None:intergenic 50.0%
!! CGGTTTTGTGGGGTTGTGTT+AGG - Chr1:77335303-77335322 MsG0180004388.01.T01:five_prime_UTR 50.0%
!! TCACCTCACAAGCCGTTTTG+TGG - Chr1:77335059-77335078 MsG0180004388.01.T01:CDS 50.0%
!! TGTTCTGGAGGAGAGGGATA+TGG + Chr1:77336356-77336375 None:intergenic 50.0%
!!! CCTAGCGGCATTTTCAGGTT+TGG + Chr1:77338738-77338757 None:intergenic 50.0%
ACCCCACAAAACGGCTTGTG+AGG + Chr1:77335065-77335084 None:intergenic 55.0%
ACGGACAAGGCAGAGGTTTC+TGG + Chr1:77334517-77334536 None:intergenic 55.0%
AGGCCAACTCCTAACCGATG+TGG + Chr1:77335241-77335260 None:intergenic 55.0%
AGGGGATCGATCAGCAGAAG+GGG - Chr1:77338633-77338652 MsG0180004388.01.T01:intron 55.0%
CACTTCCCACAGCCCAGTTA+TGG + Chr1:77335552-77335571 None:intergenic 55.0%
CAGGCCAACTCCTAACGATG+TGG + Chr1:77335011-77335030 None:intergenic 55.0%
CGCAGATATGGGACACAGCT+GGG - Chr1:77337375-77337394 MsG0180004388.01.T01:intron 55.0%
GAAGGGGATCGATCAGCAGA+AGG - Chr1:77338631-77338650 MsG0180004388.01.T01:intron 55.0%
GACACCACATGGACGGACAT+TGG + Chr1:77333935-77333954 None:intergenic 55.0%
GCAAGCTTGATGCAGAGGGA+GGG + Chr1:77335513-77335532 None:intergenic 55.0%
GCAATCCTCACCTCACAAGC+CGG - Chr1:77335052-77335071 MsG0180004388.01.T01:CDS 55.0%
GGCCAACTCCTAACCGATGT+GGG + Chr1:77335240-77335259 None:intergenic 55.0%
GTGGCCCAAGAATCGTGAAG+AGG + Chr1:77335128-77335147 None:intergenic 55.0%
TGCAAGCTTGATGCAGAGGG+AGG + Chr1:77335514-77335533 None:intergenic 55.0%
TGGACCAATGTCCGTCCATG+TGG - Chr1:77333928-77333947 MsG0180004388.01.T01:CDS 55.0%
TTAACACACCCCTCACGCTC+AGG + Chr1:77335213-77335232 None:intergenic 55.0%
! AAGGCGTTAGCTGAGGCACA+AGG - Chr1:77338436-77338455 MsG0180004388.01.T01:intron 55.0%
! GTCCCACATCGGTTAGGAGT+TGG - Chr1:77335235-77335254 MsG0180004388.01.T01:five_prime_UTR 55.0%
!! AATGACGGGTGGCCCGATAA+CGG + Chr1:77335165-77335184 None:intergenic 55.0%
!! AGAGAGGTACCTACGACGGA+AGG - Chr1:77338412-77338431 MsG0180004388.01.T01:intron 55.0%
!! CAAAACCGGCTTGTGAGGTG+AGG + Chr1:77335291-77335310 None:intergenic 55.0%
!! CACCTCACAAGCCGGTTTTG+TGG - Chr1:77335291-77335310 MsG0180004388.01.T01:five_prime_UTR 55.0%
!! CCTCACAAGCCGGTTTTGTG+GGG - Chr1:77335293-77335312 MsG0180004388.01.T01:five_prime_UTR 55.0%
!! TGCGAGAGAGGTACCTACGA+CGG - Chr1:77338408-77338427 MsG0180004388.01.T01:intron 55.0%
AACGCCTTGCCTTCCGTCGT+AGG + Chr1:77338424-77338443 None:intergenic 60.0%
ACAGGGTGGCTTAGCACCCA+TGG + Chr1:77335967-77335986 None:intergenic 60.0%
ATGGGACACAGCTGGGCAAG+AGG - Chr1:77337382-77337401 MsG0180004388.01.T01:intron 60.0%
CAGGGTGGCTTAGCACCCAT+GGG + Chr1:77335966-77335985 None:intergenic 60.0%
GCGCAGATATGGGACACAGC+TGG - Chr1:77337374-77337393 MsG0180004388.01.T01:intron 60.0%
GGTACCTACGACGGAAGGCA+AGG - Chr1:77338417-77338436 MsG0180004388.01.T01:intron 60.0%
TGGGACACAGCTGGGCAAGA+GGG - Chr1:77337383-77337402 MsG0180004388.01.T01:intron 60.0%
! GGAAGGCAAGGCGTTAGCTG+AGG - Chr1:77338429-77338448 MsG0180004388.01.T01:intron 60.0%
!! CCCCACAAAACCGGCTTGTG+AGG + Chr1:77335296-77335315 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr1 gene 77333440 77339120 77333440 ID=MsG0180004388.01;Name=MsG0180004388.01
Chr1 mRNA 77333440 77339120 77333440 ID=MsG0180004388.01.T01;Parent=MsG0180004388.01;Name=MsG0180004388.01.T01;_AED=0.17;_eAED=0.17;_QI=658|1|1|1|0.25|0.2|5|376|177
Chr1 exon 77337646 77337723 77337646 ID=MsG0180004388.01.T01:exon:14907;Parent=MsG0180004388.01.T01
Chr1 exon 77338931 77339120 77338931 ID=MsG0180004388.01.T01:exon:14906;Parent=MsG0180004388.01.T01
Chr1 five_prime_UTR 77338931 77339120 77338931 ID=MsG0180004388.01.T01:five_prime_utr;Parent=MsG0180004388.01.T01
Chr1 five_prime_UTR 77337646 77337723 77337646 ID=MsG0180004388.01.T01:five_prime_utr;Parent=MsG0180004388.01.T01
Chr1 five_prime_UTR 77335601 77335693 77335601 ID=MsG0180004388.01.T01:five_prime_utr;Parent=MsG0180004388.01.T01
Chr1 five_prime_UTR 77335179 77335475 77335179 ID=MsG0180004388.01.T01:five_prime_utr;Parent=MsG0180004388.01.T01
Chr1 CDS 77335040 77335178 77335040 ID=MsG0180004388.01.T01:cds;Parent=MsG0180004388.01.T01
Chr1 CDS 77333816 77334210 77333816 ID=MsG0180004388.01.T01:cds;Parent=MsG0180004388.01.T01
Chr1 three_prime_UTR 77333440 77333815 77333440 ID=MsG0180004388.01.T01:three_prime_utr;Parent=MsG0180004388.01.T01
Chr1 mRNA 77333440 77337732 77333440 ID=MsG0180004388.01.T02;Parent=MsG0180004388.01;Name=MsG0180004388.01.T02;_AED=0.21;_eAED=0.21;_QI=477|1|1|1|0.33|0.25|4|376|177
Chr1 exon 77337646 77337732 77337646 ID=MsG0180004388.01.T02:exon:14911;Parent=MsG0180004388.01.T02
Chr1 five_prime_UTR 77337646 77337732 77337646 ID=MsG0180004388.01.T02:five_prime_utr;Parent=MsG0180004388.01.T02
Chr1 five_prime_UTR 77335601 77335693 77335601 ID=MsG0180004388.01.T02:five_prime_utr;Parent=MsG0180004388.01.T02
Chr1 five_prime_UTR 77335179 77335475 77335179 ID=MsG0180004388.01.T02:five_prime_utr;Parent=MsG0180004388.01.T02
Chr1 CDS 77335040 77335178 77335040 ID=MsG0180004388.01.T02:cds;Parent=MsG0180004388.01.T02
Chr1 CDS 77333816 77334210 77333816 ID=MsG0180004388.01.T02:cds;Parent=MsG0180004388.01.T02
Chr1 three_prime_UTR 77333440 77333815 77333440 ID=MsG0180004388.01.T02:three_prime_utr;Parent=MsG0180004388.01.T02
Gene Sequence

>MsG0180004388.01.T01

ATGGGACACAGCTGGGCAAGAGGGTTCAGAGCTGTTACTTCTGCATATTATAGGGGTGCAGTTGGAGCACTTCTGGTATATGACATCAGCAGGCGTCAAACGTTTGATAGCATTGGTCGATGGCTTAACGAACTTCACACTCACTCTGATATGAACGTTGTCACAATACTTGTTGGGAACAAGTCAGATCTTAAGGATGCGAGAGAGGTACCTACGACGGAAGGCAAGGCGTTAGCTGAGGCACAAGGTTTGTTCTTTATGGAGACATCAGCACTTGATTCATCAAATGTAGTTGCTGCTTTTCAAACAGTTGTAAAAGAAATCTACAACATATTAAGCCGGAAGGTTATGATGTCTCAAGAGCTCAAGAAAGATGATGCTTCCTGGATTGAAAATGGAAAGACTGTTGTTCTACAACAAGAAGGGGATCGATCAGCAGAAGGGGAGACAAAAAGGGTTGTTGTTCGAAATAGGTTTGATACTATAGTGACTCCAAAACTATGTTCTTATTATAAGTTATTCAACCAAACCTGA

>MsG0180004388.01.T02

ATGGGACACAGCTGGGCAAGAGGGTTCAGAGCTGTTACTTCTGCATATTATAGGGGTGCAGTTGGAGCACTTCTGGTATATGACATCAGCAGGCGTCAAACGTTTGATAGCATTGGTCGATGGCTTAACGAACTTCACACTCACTCTGATATGAACGTTGTCACAATACTTGTTGGGAACAAGTCAGATCTTAAGGATGCGAGAGAGGTACCTACGACGGAAGGCAAGGCGTTAGCTGAGGCACAAGGTTTGTTCTTTATGGAGACATCAGCACTTGATTCATCAAATGTAGTTGCTGCTTTTCAAACAGTTGTAAAAGAAATCTACAACATATTAAGCCGGAAGGTTATGATGTCTCAAGAGCTCAAGAAAGATGATGCTTCCTGGATTGAAAATGGAAAGACTGTTGTTCTACAACAAGAAGGGGATCGATCAGCAGAAGGGGAGACAAAAAGGGTTGTTGTTCGAAATAGGTTTGATACTATAGTGACTCCAAAACTATGTTCTTATTATAAGTTATTCAACCAAACCTGA

Protein sequence

>MsG0180004388.01.T01

MGHSWARGFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVPTTEGKALAEAQGLFFMETSALDSSNVVAAFQTVVKEIYNILSRKVMMSQELKKDDASWIENGKTVVLQQEGDRSAEGETKRVVVRNRFDTIVTPKLCSYYKLFNQT*

>MsG0180004388.01.T02

MGHSWARGFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVPTTEGKALAEAQGLFFMETSALDSSNVVAAFQTVVKEIYNILSRKVMMSQELKKDDASWIENGKTVVLQQEGDRSAEGETKRVVVRNRFDTIVTPKLCSYYKLFNQT*