AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0080048058.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048058.01.T01 MTR_0121s0010 100.000 242 0 0 1 242 330 571 2.83e-176 505
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048058.01.T01 AT2G41770 73.589 443 113 3 1 440 330 771 0.0 701
MsG0080048058.01.T01 AT3G57420 72.748 444 116 3 1 440 323 765 0.0 681

Find 197 sgRNAs with CRISPR-Local

Find 360 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGGATGAACAAGCGAATT+TGG 0.154291 contig185end:+27480 MsG0080048058.01.T01:five_prime_UTR
TGGATCGTGGTTTCGGTTTC+GGG 0.176847 contig185end:+27344 MsG0080048058.01.T01:five_prime_UTR
TTACCCCTTTATTGTATATT+TGG 0.182549 contig185end:+31183 MsG0080048058.01.T01:three_prime_UTR
ATGGATCGTGGTTTCGGTTT+CGG 0.202501 contig185end:+27343 MsG0080048058.01.T01:five_prime_UTR
CTTGAATGGAGGTTGCTTTA+TGG 0.204494 contig185end:+28594 MsG0080048058.01.T01:CDS
GGCTTTGATGCTTCCGGTTT+CGG 0.226169 contig185end:+28029 MsG0080048058.01.T01:CDS
TTAATCCGTATGTTCATTTC+GGG 0.242895 contig185end:+27728 MsG0080048058.01.T01:five_prime_UTR
CCATTTCTCCGATAAGAAAT+TGG 0.244039 contig185end:-27324 None:intergenic
GGAAGTGATTGATGGGGATT+TGG 0.244626 contig185end:+27615 MsG0080048058.01.T01:five_prime_UTR
GTTAATCCGTATGTTCATTT+CGG 0.262879 contig185end:+27727 MsG0080048058.01.T01:five_prime_UTR
TGGTCGTTTGATTAAGTATT+TGG 0.267726 contig185end:+28209 MsG0080048058.01.T01:CDS
TTGAATGGAGGTTGCTTTAT+GGG 0.271758 contig185end:+28595 MsG0080048058.01.T01:CDS
ATTGGGGACAGAGGCTTCTT+TGG 0.272761 contig185end:+28085 MsG0080048058.01.T01:CDS
CAAGTGTATTACATGTTTCT+TGG 0.275021 contig185end:-31051 None:intergenic
ATAATACAATTCTTAACTAT+TGG 0.279959 contig185end:+29566 MsG0080048058.01.T01:CDS
GGATTTGGATTTGGATTTGA+TGG 0.280995 contig185end:-27026 None:intergenic
CAGAGGCTTCTTTGGGAAGT+TGG 0.281653 contig185end:+28093 MsG0080048058.01.T01:CDS
CAATACAACTTCAACTAGTT+TGG 0.291418 contig185end:-26776 None:intergenic
ACTTACTGCCGCTTGGCTTC+AGG 0.292900 contig185end:+28329 MsG0080048058.01.T01:CDS
AACAAGCGAATTTGGGGTTT+AGG 0.295560 contig185end:+27488 MsG0080048058.01.T01:five_prime_UTR
GTGGACCAAATATACAATAA+AGG 0.296960 contig185end:-31188 None:intergenic
TTGGATGAACAAGCGAATTT+GGG 0.298467 contig185end:+27481 MsG0080048058.01.T01:five_prime_UTR
GAAGTGATTGATGGGGATTT+GGG 0.301864 contig185end:+27616 MsG0080048058.01.T01:five_prime_UTR
GGAGAAATGGATCGTGGTTT+CGG 0.315807 contig185end:+27337 MsG0080048058.01.T01:five_prime_UTR
ACAAGCGAATTTGGGGTTTA+GGG 0.318031 contig185end:+27489 MsG0080048058.01.T01:five_prime_UTR
TAAGGTTGAGGTTACTTGTT+TGG 0.318086 contig185end:-26820 None:intergenic
TCCTATGTTCTTTGTCTCAA+TGG 0.319924 contig185end:+30796 MsG0080048058.01.T01:CDS
GGATGTAGATCTTGTTGTTC+AGG 0.321727 contig185end:+28656 MsG0080048058.01.T01:CDS
TATTAAGCTTATCAGAATAA+TGG 0.322958 contig185end:+30952 MsG0080048058.01.T01:CDS
GGATTAACAACAGTCCTATT+AGG 0.325620 contig185end:-27712 None:intergenic
TAATTCATCGACTCTTTATT+CGG 0.328571 contig185end:+30880 MsG0080048058.01.T01:CDS
TGGACCAAATATACAATAAA+GGG 0.337671 contig185end:-31187 None:intergenic
GCAGCCAAGGCTAATGTCTT+TGG 0.343412 contig185end:+28374 MsG0080048058.01.T01:CDS
AGTTGCCGTCTGTTCATCTT+GGG 0.343959 contig185end:+28457 MsG0080048058.01.T01:CDS
CAAACTGTGGATCACTAATA+AGG 0.351930 contig185end:+29612 MsG0080048058.01.T01:CDS
TGCCTTATGATTCTTATGTT+AGG 0.355042 contig185end:+27524 MsG0080048058.01.T01:five_prime_UTR
TCAAGGGCCGTGCGTTCAAC+AGG 0.356613 contig185end:-28576 None:intergenic
CCAATTTCTTATCGGAGAAA+TGG 0.359485 contig185end:+27324 MsG0080048058.01.T01:five_prime_UTR
TGTTGTTCAGGAGGTCCATT+TGG 0.361246 contig185end:+28668 MsG0080048058.01.T01:CDS
CTTATTAGTGATCCACAGTT+TGG 0.364518 contig185end:-29611 None:intergenic
CCTTTCAAACCAATTCCATT+AGG 0.365051 contig185end:-30991 None:intergenic
TAGATTGTTTGAGAAGATCT+TGG 0.375637 contig185end:+28254 MsG0080048058.01.T01:CDS
GGATCCACTCCTAATGGAAT+TGG 0.390534 contig185end:+30982 MsG0080048058.01.T01:CDS
ATAGTCATGATAATCCTAAT+AGG 0.391156 contig185end:+27698 MsG0080048058.01.T01:five_prime_UTR
TGAAGTTGTATTGAAGCTTA+AGG 0.391419 contig185end:+26786 MsG0080048058.01.T01:five_prime_UTR
CATCTTGGGGTTGAAGAAAC+AGG 0.392444 contig185end:+28471 MsG0080048058.01.T01:CDS
GCGGTACGCCAATTTCTTAT+CGG 0.393983 contig185end:+27316 MsG0080048058.01.T01:five_prime_UTR
CTACTGTTCATAGATATGAT+AGG 0.407020 contig185end:+28139 MsG0080048058.01.T01:CDS
TTGGAAAATGTGGGTGAGAT+TGG 0.407974 contig185end:+27781 MsG0080048058.01.T01:five_prime_UTR
AAGGTTGAGGTTACTTGTTT+GGG 0.411934 contig185end:-26819 None:intergenic
TTGGGGACAGAGGCTTCTTT+GGG 0.414271 contig185end:+28086 MsG0080048058.01.T01:CDS
AGGCTAATGTCTTTGGAACT+TGG 0.425095 contig185end:+28381 MsG0080048058.01.T01:CDS
TTTGAGCTGAAGAATGCTCT+TGG 0.429481 contig185end:-27001 None:intergenic
ACTTGTATGCTTGGTCCAAA+TGG 0.429651 contig185end:-28683 None:intergenic
AAGTTGCCGTCTGTTCATCT+TGG 0.435637 contig185end:+28456 MsG0080048058.01.T01:CDS
GGATCTCTAGATTGTCTACT+AGG 0.437860 contig185end:-30757 None:intergenic
TCGAGTATCCACGCGTCGAT+TGG 0.438176 contig185end:+27261 MsG0080048058.01.T01:five_prime_UTR
CTTCAGGATTTGTTAGCTGT+TGG 0.439157 contig185end:+28345 MsG0080048058.01.T01:CDS
GCCATCCTACTAACCGAAAC+CGG 0.441030 contig185end:-28042 None:intergenic
TTCCTAACATAAGAATCATA+AGG 0.444632 contig185end:-27526 None:intergenic
AAGATCTTTCTCCTCCGAAA+AGG 0.448139 contig185end:-28175 None:intergenic
TCCGGTTTCGGTTAGTAGGA+TGG 0.448274 contig185end:+28041 MsG0080048058.01.T01:CDS
ACAGGGCTTACTTGTATGCT+TGG 0.450117 contig185end:-28692 None:intergenic
TCTTATGTTAGGAAAATTGT+TGG 0.452749 contig185end:+27535 MsG0080048058.01.T01:five_prime_UTR
GTATGAGTAAAACGGTTTGT+AGG 0.456341 contig185end:-27077 None:intergenic
AAGTGATTGATGGGGATTTG+GGG 0.459051 contig185end:+27617 MsG0080048058.01.T01:five_prime_UTR
CTGTTTCTTAATACTAGCTC+AGG 0.460358 contig185end:+31020 MsG0080048058.01.T01:three_prime_UTR
TGCTTCCGGTTTCGGTTAGT+AGG 0.460720 contig185end:+28037 MsG0080048058.01.T01:CDS
TGGGAAACAGTTTATTCAGC+AGG 0.461080 contig185end:+27834 MsG0080048058.01.T01:five_prime_UTR
ATCGTATTAAATGAATTAAC+CGG 0.461414 contig185end:-27985 None:intergenic
GGTTGGCAGGTTGTGGCGAT+TGG 0.462329 contig185end:+27406 MsG0080048058.01.T01:five_prime_UTR
ATTTCGGGCAAAGATCGGTT+TGG 0.462691 contig185end:+27743 MsG0080048058.01.T01:five_prime_UTR
GGTGAAGGTGAAGGGTTGGC+AGG 0.466313 contig185end:+27393 MsG0080048058.01.T01:five_prime_UTR
TTGAACGCACGGCCCTTGAA+TGG 0.467596 contig185end:+28580 MsG0080048058.01.T01:CDS
TGCTCATCATGCATTGCAGC+GGG 0.467759 contig185end:+28553 MsG0080048058.01.T01:CDS
CATAAAGCAACCTCCATTCA+AGG 0.468909 contig185end:-28593 None:intergenic
TAAGAATTGTATTATCCTGC+AGG 0.478651 contig185end:-29558 None:intergenic
TGCTCTTGGACCAACATTGA+AGG 0.480017 contig185end:-26987 None:intergenic
TGAAGGGGATCCACTCCTAA+TGG 0.480182 contig185end:+30976 MsG0080048058.01.T01:CDS
TTTATATTCTAAAATTTGTA+GGG 0.481296 contig185end:+31138 MsG0080048058.01.T01:three_prime_UTR
CCTTGAGGCAATGCAACCTT+CGG 0.482435 contig185end:-27952 None:intergenic
ACAAGCAAGCATGGTACAAA+AGG 0.482807 contig185end:+30598 MsG0080048058.01.T01:CDS
GATAGAGGGGAAGTGATTGA+TGG 0.484221 contig185end:+27607 MsG0080048058.01.T01:five_prime_UTR
CAAGAAACATGTAATACACT+TGG 0.488778 contig185end:+31052 MsG0080048058.01.T01:three_prime_UTR
CCGGCGGATTGGAGTTTGAA+AGG 0.489846 contig185end:+27442 MsG0080048058.01.T01:five_prime_UTR
CTTATGTTAGGAAAATTGTT+GGG 0.491867 contig185end:+27536 MsG0080048058.01.T01:five_prime_UTR
TGGAAAATGTGGGTGAGATT+GGG 0.491908 contig185end:+27782 MsG0080048058.01.T01:five_prime_UTR
GGTGAAGGGTTGGCAGGTTG+TGG 0.495035 contig185end:+27399 MsG0080048058.01.T01:five_prime_UTR
ATTCGAGAACTCCGGCGGAT+TGG 0.496519 contig185end:+27431 MsG0080048058.01.T01:five_prime_UTR
CCGTCGCCAATGTTTGCTCT+CGG 0.496762 contig185end:-28408 None:intergenic
TGTTCATTTCGGGCAAAGAT+CGG 0.496894 contig185end:+27738 MsG0080048058.01.T01:five_prime_UTR
ATAGAGGGGAAGTGATTGAT+GGG 0.496914 contig185end:+27608 MsG0080048058.01.T01:five_prime_UTR
CGCGAATTTCTATCGGCGAT+TGG 0.499666 contig185end:-27296 None:intergenic
GGTTCTTTGTATGAGTAAAA+CGG 0.504942 contig185end:-27085 None:intergenic
TTTGTGGGATAAACTCCCTC+TGG 0.506060 contig185end:-28434 None:intergenic
CCTAATGGAATTGGTTTGAA+AGG 0.515705 contig185end:+30991 MsG0080048058.01.T01:exon
AGGTTTGCCGTTGGAAAATG+TGG 0.515820 contig185end:+27771 MsG0080048058.01.T01:five_prime_UTR
ATTTGATAAGCATGCGCCGA+AGG 0.516174 contig185end:+27936 MsG0080048058.01.T01:five_prime_UTR
AGATCTTTCTCCTCCGAAAA+GGG 0.517524 contig185end:-28174 None:intergenic
AGGCTTCTTTGGGAAGTTGG+TGG 0.517813 contig185end:+28096 MsG0080048058.01.T01:CDS
GATGTTGAATTGGTTGGTGA+AGG 0.518714 contig185end:+27649 MsG0080048058.01.T01:five_prime_UTR
ACACTCCATGGATGAACAGC+AGG 0.520445 contig185end:-30911 None:intergenic
TAAAACACAGAATCAACATC+AGG 0.525213 contig185end:-27874 None:intergenic
GGATCCAGGTACCCGAGTCT+TGG 0.526382 contig185end:+30531 MsG0080048058.01.T01:intron
AGATTGCTAATTTAATCAGA+TGG 0.527605 contig185end:+28508 MsG0080048058.01.T01:CDS
ATTCAGCAGGGGATTTCGAA+TGG 0.529606 contig185end:+27847 MsG0080048058.01.T01:five_prime_UTR
GTATTTGGTTCTGTGGAGAT+CGG 0.533204 contig185end:+28224 MsG0080048058.01.T01:CDS
AAGTCCCTGCTGTTCATCCA+TGG 0.538895 contig185end:+30906 MsG0080048058.01.T01:CDS
TGCTCACTTGATACACTCCA+TGG 0.539121 contig185end:-30923 None:intergenic
ATATTCTAAAATTTGTAGGG+TGG 0.539442 contig185end:+31141 MsG0080048058.01.T01:three_prime_UTR
GGCGTACCGCGAATTTCTAT+CGG 0.540568 contig185end:-27303 None:intergenic
CTTATCAGAATAATGGCTGA+AGG 0.541500 contig185end:+30959 MsG0080048058.01.T01:CDS
CCGAAGGTTGCATTGCCTCA+AGG 0.543760 contig185end:+27952 MsG0080048058.01.T01:five_prime_UTR
CAAACCAATTCCATTAGGAG+TGG 0.547394 contig185end:-30986 None:intergenic
AATTGGTTGGTGAAGGTGCT+AGG 0.547539 contig185end:+27656 MsG0080048058.01.T01:five_prime_UTR
TAGGAATTGCAACCTTCTGA+TGG 0.548976 contig185end:-30778 None:intergenic
TACTGTTCATAGATATGATA+GGG 0.549071 contig185end:+28140 MsG0080048058.01.T01:CDS
AATTGGTGAAGGTGAAGGGT+TGG 0.549083 contig185end:+27389 MsG0080048058.01.T01:five_prime_UTR
GAGCTATGCAATGGCAGAGG+AGG 0.549739 contig185end:+28281 MsG0080048058.01.T01:CDS
GATCAATTTAGCAGTGCAGA+AGG 0.550258 contig185end:+29526 MsG0080048058.01.T01:CDS
AAAGATCTTCATGTGAATGT+TGG 0.550556 contig185end:+28189 MsG0080048058.01.T01:CDS
AGTTCCAAAGACATTAGCCT+TGG 0.553282 contig185end:-28378 None:intergenic
TGATTAAGTATTTGGTTCTG+TGG 0.556491 contig185end:+28217 MsG0080048058.01.T01:CDS
CTGTTGGTTATCAGCAGCCA+AGG 0.556994 contig185end:+28361 MsG0080048058.01.T01:CDS
CAAAGATCGGTTTGGCCGAG+AGG 0.557674 contig185end:+27751 MsG0080048058.01.T01:five_prime_UTR
ATGTGAAACTTACTGCCGCT+TGG 0.558320 contig185end:+28322 MsG0080048058.01.T01:CDS
AGTAAGTTTCACATCCTTGT+CGG 0.561276 contig185end:-28313 None:intergenic
CTTCAACTAGTTTGGTGTGG+TGG 0.566078 contig185end:-26768 None:intergenic
CTATTGGAACTTACTACAAG+CGG 0.566905 contig185end:+29582 MsG0080048058.01.T01:CDS
TTATCAAATCGAATATCAAA+CGG 0.567778 contig185end:-27922 None:intergenic
GGTTACTTGTTTGGGTGTGT+CGG 0.569498 contig185end:-26811 None:intergenic
TTATCAGAATAATGGCTGAA+GGG 0.569902 contig185end:+30960 MsG0080048058.01.T01:CDS
TATCAGAATAATGGCTGAAG+GGG 0.570759 contig185end:+30961 MsG0080048058.01.T01:CDS
GGGAAACAGTTTATTCAGCA+GGG 0.570903 contig185end:+27835 MsG0080048058.01.T01:five_prime_UTR
AGCTATGCAATGGCAGAGGA+GGG 0.571690 contig185end:+28282 MsG0080048058.01.T01:CDS
CAGCGGGCCTGTTGAACGCA+CGG 0.576027 contig185end:+28569 MsG0080048058.01.T01:CDS
GAACCTCGACTTCTCCGTAT+GGG 0.576994 contig185end:+27103 MsG0080048058.01.T01:five_prime_UTR
TAATTGACTTGAAAGTGAGC+TGG 0.577756 contig185end:-30635 None:intergenic
TTGGCCGAGAGGTTTGCCGT+TGG 0.578979 contig185end:+27762 MsG0080048058.01.T01:five_prime_UTR
TCATAGATATGATAGGGTTG+AGG 0.580741 contig185end:+28146 MsG0080048058.01.T01:CDS
CTTTGCCCGAAATGAACATA+CGG 0.581045 contig185end:-27733 None:intergenic
TTTACACTCAGGTGTTTGGT+GGG 0.581224 contig185end:+27815 MsG0080048058.01.T01:five_prime_UTR
GTTGCCGTCTGTTCATCTTG+GGG 0.584264 contig185end:+28458 MsG0080048058.01.T01:CDS
AGAACCTCGACTTCTCCGTA+TGG 0.585282 contig185end:+27102 MsG0080048058.01.T01:five_prime_UTR
CTATCATATCTATGAACAGT+AGG 0.586324 contig185end:-28138 None:intergenic
GCCTCAAGGTGTGATGATGC+CGG 0.591200 contig185end:+27966 MsG0080048058.01.T01:exon
GTTATCTCAACAAGCAAGCA+TGG 0.594597 contig185end:+30589 MsG0080048058.01.T01:CDS
CTTGGATTTGAGCTATGCAA+TGG 0.599337 contig185end:+28272 MsG0080048058.01.T01:CDS
TGGTGAAGGTGCTAGGCAAG+AGG 0.599388 contig185end:+27663 MsG0080048058.01.T01:five_prime_UTR
CTGGGGACAACAATGCCGAC+TGG 0.599896 contig185end:+30567 MsG0080048058.01.T01:CDS
TGAGAGGTTATTGGGGACAG+AGG 0.600387 contig185end:+28076 MsG0080048058.01.T01:CDS
TGTAGATCTTGTTGTTCAGG+AGG 0.604664 contig185end:+28659 MsG0080048058.01.T01:CDS
AAGAAACATGTAATACACTT+GGG 0.605203 contig185end:+31053 MsG0080048058.01.T01:three_prime_UTR
TCTCAGAACTGCATAACAAG+AGG 0.608851 contig185end:-30685 None:intergenic
ATAAAGCAACCTCCATTCAA+GGG 0.609066 contig185end:-28592 None:intergenic
AACGCACGGCCCTTGAATGG+AGG 0.610127 contig185end:+28583 MsG0080048058.01.T01:CDS
GTGCTCATCATGCATTGCAG+CGG 0.613729 contig185end:+28552 MsG0080048058.01.T01:CDS
TGGATGAACAAGCGAATTTG+GGG 0.613883 contig185end:+27482 MsG0080048058.01.T01:five_prime_UTR
CTTATCGGAGAAATGGATCG+TGG 0.614495 contig185end:+27331 MsG0080048058.01.T01:five_prime_UTR
GATTGGTGATTCGAGAACTC+CGG 0.618148 contig185end:+27423 MsG0080048058.01.T01:five_prime_UTR
CAATCTAGAGATCCATCAGA+AGG 0.618842 contig185end:+30766 MsG0080048058.01.T01:CDS
TAAAGAGTCGATGAATTAGT+CGG 0.622063 contig185end:-30875 None:intergenic
TCATATCTATGAACAGTAGG+TGG 0.622312 contig185end:-28135 None:intergenic
CAATCGCCGATAGAAATTCG+CGG 0.623883 contig185end:+27297 MsG0080048058.01.T01:five_prime_UTR
TCCATTGAGACAAAGAACAT+AGG 0.624497 contig185end:-30797 None:intergenic
CCTTTCAAACTCCAATCCGC+CGG 0.626527 contig185end:-27442 None:intergenic
CCGAGAGCAAACATTGGCGA+CGG 0.626681 contig185end:+28408 MsG0080048058.01.T01:CDS
TTTCTGTCTCTCTGTCTGTG+TGG 0.626924 contig185end:+26862 MsG0080048058.01.T01:five_prime_UTR
TTTGAGCTATGCAATGGCAG+AGG 0.629954 contig185end:+28278 MsG0080048058.01.T01:CDS
AAAACAGAAGACCAAGACTC+GGG 0.631408 contig185end:-30542 None:intergenic
ACCGGCATCATCACACCTTG+AGG 0.632524 contig185end:-27967 None:intergenic
TAAAACAGAAGACCAAGACT+CGG 0.634593 contig185end:-30543 None:intergenic
CAACTTCAACTAGTTTGGTG+TGG 0.635626 contig185end:-26771 None:intergenic
TAGGAAGAAAAGTGCTGCGA+CGG 0.642741 contig185end:-27174 None:intergenic
GGAAACAGTTTATTCAGCAG+GGG 0.643036 contig185end:+27836 MsG0080048058.01.T01:five_prime_UTR
GGTCGTCCGAGAGCAAACAT+TGG 0.645849 contig185end:+28402 MsG0080048058.01.T01:CDS
TGGTGATTCGAGAACTCCGG+CGG 0.650136 contig185end:+27426 MsG0080048058.01.T01:five_prime_UTR
GGACCAAATATACAATAAAG+GGG 0.650966 contig185end:-31186 None:intergenic
CTCGAAACAAAGTAAAGCGG+CGG 0.651448 contig185end:-27213 None:intergenic
TATTTGTTTGCAATTCAACA+TGG 0.651854 contig185end:+27559 MsG0080048058.01.T01:five_prime_UTR
ATGCCCATACGGAGAAGTCG+AGG 0.653724 contig185end:-27106 None:intergenic
GATTGTCTACTAGGTTAACA+AGG 0.654365 contig185end:-30748 None:intergenic
TAGAGGGGAAGTGATTGATG+GGG 0.654974 contig185end:+27609 MsG0080048058.01.T01:five_prime_UTR
TCAACCCCAAGATGAACAGA+CGG 0.659344 contig185end:-28462 None:intergenic
GGTTACGACGAGAAGAATGA+CGG 0.668817 contig185end:-27153 None:intergenic
GTTCTCGAAACAAAGTAAAG+CGG 0.672242 contig185end:-27216 None:intergenic
CATTGGCGACGGAGACCAGA+GGG 0.673144 contig185end:+28419 MsG0080048058.01.T01:CDS
TAACAAATCCTGAAGCCAAG+CGG 0.680742 contig185end:-28337 None:intergenic
TGCTTGTTGAGATAACCAGT+CGG 0.682815 contig185end:-30582 None:intergenic
CGGTGTCGCCAACGTTACGT+AGG 0.691901 contig185end:-27193 None:intergenic
AAGCGGATAAAACCAAACTG+TGG 0.694265 contig185end:+29599 MsG0080048058.01.T01:CDS
CACTCCATGGATGAACAGCA+GGG 0.698430 contig185end:-30910 None:intergenic
AGAGTCGATGAATTAGTCGG+AGG 0.700411 contig185end:-30872 None:intergenic
GGTTTGCCGTTGGAAAATGT+GGG 0.718853 contig185end:+27772 MsG0080048058.01.T01:five_prime_UTR
AAATCACTAATTAAGCGCTG+AGG 0.719879 contig185end:-30719 None:intergenic
ACTTGGGTAAATCATCTACA+CGG 0.722737 contig185end:+31069 MsG0080048058.01.T01:three_prime_UTR
ACATTGGCGACGGAGACCAG+AGG 0.725189 contig185end:+28418 MsG0080048058.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATATTCTAAAATTTGTA+GGG + contig185end:31138-31157 MsG0080048058.01.T01:three_prime_UTR 10.0%
!!! TTTTATATTCTAAAATTTGT+AGG + contig185end:31137-31156 MsG0080048058.01.T01:three_prime_UTR 10.0%
!! AAAAGAAAAACATAAATACA+GGG - contig185end:30092-30111 None:intergenic 15.0%
!! AAACATTATATTAACAACTT+AGG - contig185end:29972-29991 None:intergenic 15.0%
!! AAATTAAAATTATATCCAGT+AGG - contig185end:29467-29486 None:intergenic 15.0%
!! AAGATATGTGAAAATTATAA+AGG + contig185end:30307-30326 MsG0080048058.01.T01:intron 15.0%
!! AGATATGTGAAAATTATAAA+GGG + contig185end:30308-30327 MsG0080048058.01.T01:intron 15.0%
!! ATAATACAATTCTTAACTAT+TGG + contig185end:29566-29585 MsG0080048058.01.T01:CDS 15.0%
!! ATTAGAAATAAATCATGAAA+AGG + contig185end:29364-29383 MsG0080048058.01.T01:intron 15.0%
!! TAAAAGAAAAACATAAATAC+AGG - contig185end:30093-30112 None:intergenic 15.0%
!! TTAGAAATAAATCATGAAAA+GGG + contig185end:29365-29384 MsG0080048058.01.T01:intron 15.0%
!!! AACAATTTTGTAAAGATTTT+CGG - contig185end:27132-27151 None:intergenic 15.0%
!!! ATATTTTCACAAAAAAAGAA+AGG - contig185end:31238-31257 None:intergenic 15.0%
!!! CTAAATTGATCAAATATTTT+TGG - contig185end:29517-29536 None:intergenic 15.0%
!!! TTTTTTACATAACATATGAT+TGG - contig185end:29941-29960 None:intergenic 15.0%
!!! TTTTTTGTGAAAATATGAAA+CGG + contig185end:31242-31261 MsG0080048058.01.T01:three_prime_UTR 15.0%
!! AAAGAAAAACATAAATACAG+GGG - contig185end:30091-30110 None:intergenic 20.0%
!! AATAAAGGGGTAAAAAAAAA+AGG - contig185end:31176-31195 None:intergenic 20.0%
!! ATAAAGGGGTAAAAAAAAAA+GGG - contig185end:31175-31194 None:intergenic 20.0%
!! ATCGTATTAAATGAATTAAC+CGG - contig185end:27988-28007 None:intergenic 20.0%
!! ATGTTATGTAAAAAAGAGTT+TGG + contig185end:29946-29965 MsG0080048058.01.T01:intron 20.0%
!! CATATATTAATGTTAGCATA+TGG - contig185end:29143-29162 None:intergenic 20.0%
!! TATTAAGCTTATCAGAATAA+TGG + contig185end:30952-30971 MsG0080048058.01.T01:CDS 20.0%
!! TTATCAAATCGAATATCAAA+CGG - contig185end:27925-27944 None:intergenic 20.0%
!!! AGATCACTTTTTTTCAAATA+AGG - contig185end:27056-27075 None:intergenic 20.0%
!!! ATTCTGTGTTTTATTTTACA+AGG + contig185end:27884-27903 MsG0080048058.01.T01:five_prime_UTR 20.0%
!!! ATTTGGTATCAAATGTTTTA+TGG + contig185end:28944-28963 MsG0080048058.01.T01:intron 20.0%
!!! CGATATAGTTTTAATAATTG+CGG + contig185end:28788-28807 MsG0080048058.01.T01:intron 20.0%
!!! CTTTTTTTCAAATAAGGTTT+TGG - contig185end:27050-27069 None:intergenic 20.0%
!!! GTTTTATTTTACAAGGAAAT+CGG + contig185end:27891-27910 MsG0080048058.01.T01:five_prime_UTR 20.0%
!!! TAATGTGTTCATTTTATGTA+TGG - contig185end:30271-30290 None:intergenic 20.0%
!!! TTTGGTATCAAATGTTTTAT+GGG + contig185end:28945-28964 MsG0080048058.01.T01:intron 20.0%
!!! TTTTATTTTACAAGGAAATC+GGG + contig185end:27892-27911 MsG0080048058.01.T01:five_prime_UTR 20.0%
!!! TTTTTTTCACTAAATCATGT+TGG + contig185end:30006-30025 MsG0080048058.01.T01:intron 20.0%
! AAGAAACATGTAATACACTT+GGG + contig185end:31053-31072 MsG0080048058.01.T01:three_prime_UTR 25.0%
! AATACACTAGTACTTCAATA+AGG - contig185end:29415-29434 None:intergenic 25.0%
! AATGCTATGTCTTTCAAAAA+TGG - contig185end:30385-30404 None:intergenic 25.0%
! AGATTGCTAATTTAATCAGA+TGG + contig185end:28508-28527 MsG0080048058.01.T01:CDS 25.0%
! AGTTGTATGCAAAATAAAAC+AGG - contig185end:28713-28732 None:intergenic 25.0%
! ATAATCATTAGAGGCTTATT+TGG - contig185end:30177-30196 None:intergenic 25.0%
! ATAGTCATGATAATCCTAAT+AGG + contig185end:27698-27717 MsG0080048058.01.T01:five_prime_UTR 25.0%
! ATATGAAAGTAGAGTTAAGA+TGG + contig185end:29335-29354 MsG0080048058.01.T01:intron 25.0%
! ATTTGATACCAAATTGTGAA+GGG - contig185end:28938-28957 None:intergenic 25.0%
! CAGACAATAATAATCATTAG+AGG - contig185end:30186-30205 None:intergenic 25.0%
! CTCTAATGATTATTATTGTC+TGG + contig185end:30184-30203 MsG0080048058.01.T01:intron 25.0%
! CTTATGTTAGGAAAATTGTT+GGG + contig185end:27536-27555 MsG0080048058.01.T01:five_prime_UTR 25.0%
! GATTAGAAATAAATGCTTCA+CGG - contig185end:29249-29268 None:intergenic 25.0%
! GTTGTATGCAAAATAAAACA+GGG - contig185end:28712-28731 None:intergenic 25.0%
! TACTGTTCATAGATATGATA+GGG + contig185end:28140-28159 MsG0080048058.01.T01:CDS 25.0%
! TATTTGTTTGCAATTCAACA+TGG + contig185end:27559-27578 MsG0080048058.01.T01:five_prime_UTR 25.0%
! TCTTATGTTAGGAAAATTGT+TGG + contig185end:27535-27554 MsG0080048058.01.T01:five_prime_UTR 25.0%
! TGACTTTGATCAAATAATGA+GGG - contig185end:30066-30085 None:intergenic 25.0%
! TGGACCAAATATACAATAAA+GGG - contig185end:31190-31209 None:intergenic 25.0%
! TTACCCCTTTATTGTATATT+TGG + contig185end:31183-31202 MsG0080048058.01.T01:three_prime_UTR 25.0%
! TTCAGAGTCTGATAAAATAT+CGG + contig185end:29051-29070 MsG0080048058.01.T01:intron 25.0%
! TTCCTAACATAAGAATCATA+AGG - contig185end:27529-27548 None:intergenic 25.0%
! TTGACTTTGATCAAATAATG+AGG - contig185end:30067-30086 None:intergenic 25.0%
! TTGCAAATTAAAACAGAAAG+TGG - contig185end:29727-29746 None:intergenic 25.0%
!! AAGGAAAAAAAAAGAAGTGT+TGG - contig185end:26971-26990 None:intergenic 25.0%
!! ACATTAATTCATTTTCTCTG+TGG - contig185end:31210-31229 None:intergenic 25.0%
!! ATTTGAAATAGTGCTCATTT+AGG - contig185end:30129-30148 None:intergenic 25.0%
!! TTTGAAATAGTGCTCATTTA+GGG - contig185end:30128-30147 None:intergenic 25.0%
!!! AACGTTTTTTAAAACCAAAC+AGG - contig185end:29693-29712 None:intergenic 25.0%
!!! ACTTTTTGATTGATCATGAA+AGG + contig185end:29276-29295 MsG0080048058.01.T01:intron 25.0%
!!! ATATTCTAAAATTTGTAGGG+TGG + contig185end:31141-31160 MsG0080048058.01.T01:three_prime_UTR 25.0%
!!! ATTGATCAAATATTTTTGGC+AGG - contig185end:29513-29532 None:intergenic 25.0%
!!! CTTTTTTTTTCCTTCAATGT+TGG + contig185end:26977-26996 MsG0080048058.01.T01:five_prime_UTR 25.0%
!!! GAAACATTTTGATGTTGAAT+TGG + contig185end:27639-27658 MsG0080048058.01.T01:five_prime_UTR 25.0%
!!! TAATTCATCGACTCTTTATT+CGG + contig185end:30880-30899 MsG0080048058.01.T01:CDS 25.0%
!!! TAGATTGTTTTATCAAGAAC+AGG - contig185end:30842-30861 None:intergenic 25.0%
!!! TTACTACTATTTTTTCCTAC+TGG + contig185end:29449-29468 MsG0080048058.01.T01:intron 25.0%
!!! TTCAAATAAGGTTTTGGATT+TGG - contig185end:27044-27063 None:intergenic 25.0%
AAAGATCTTCATGTGAATGT+TGG + contig185end:28189-28208 MsG0080048058.01.T01:CDS 30.0%
AAATGCTTCACGGTAAAAAT+AGG - contig185end:29239-29258 None:intergenic 30.0%
ATCAGATGGAGAAAAACTTT+CGG + contig185end:28522-28541 MsG0080048058.01.T01:CDS 30.0%
CAAGAAACATGTAATACACT+TGG + contig185end:31052-31071 MsG0080048058.01.T01:three_prime_UTR 30.0%
CAAGTGTATTACATGTTTCT+TGG - contig185end:31054-31073 None:intergenic 30.0%
CAATACAACTTCAACTAGTT+TGG - contig185end:26779-26798 None:intergenic 30.0%
CATTAACTCTTAAAACTCCA+CGG + contig185end:30401-30420 MsG0080048058.01.T01:intron 30.0%
CATTTGATACCAAATTGTGA+AGG - contig185end:28939-28958 None:intergenic 30.0%
CTACTGTTCATAGATATGAT+AGG + contig185end:28139-28158 MsG0080048058.01.T01:CDS 30.0%
CTATCATATCTATGAACAGT+AGG - contig185end:28141-28160 None:intergenic 30.0%
GAGACAAAATGAAAGTAAGA+AGG - contig185end:29761-29780 None:intergenic 30.0%
GGACCAAATATACAATAAAG+GGG - contig185end:31189-31208 None:intergenic 30.0%
GGTTCTTTGTATGAGTAAAA+CGG - contig185end:27088-27107 None:intergenic 30.0%
GTGAACACAGATAATGAAAT+CGG + contig185end:29794-29813 MsG0080048058.01.T01:intron 30.0%
GTGGACCAAATATACAATAA+AGG - contig185end:31191-31210 None:intergenic 30.0%
GTTAATCCGTATGTTCATTT+CGG + contig185end:27727-27746 MsG0080048058.01.T01:five_prime_UTR 30.0%
TAAAACACAGAATCAACATC+AGG - contig185end:27877-27896 None:intergenic 30.0%
TAAAGAGTCGATGAATTAGT+CGG - contig185end:30878-30897 None:intergenic 30.0%
TAAATACATTCGTATACGCA+GGG + contig185end:30230-30249 MsG0080048058.01.T01:intron 30.0%
TAAGAATTGTATTATCCTGC+AGG - contig185end:29561-29580 None:intergenic 30.0%
TAGATTGTTTGAGAAGATCT+TGG + contig185end:28254-28273 MsG0080048058.01.T01:CDS 30.0%
TGAAGTTGTATTGAAGCTTA+AGG + contig185end:26786-26805 MsG0080048058.01.T01:five_prime_UTR 30.0%
TGATTGATCATGAAAGGATT+TGG + contig185end:29282-29301 MsG0080048058.01.T01:intron 30.0%
TGCCTTATGATTCTTATGTT+AGG + contig185end:27524-27543 MsG0080048058.01.T01:five_prime_UTR 30.0%
TGGTCGTTTGATTAAGTATT+TGG + contig185end:28209-28228 MsG0080048058.01.T01:CDS 30.0%
TTAAATACATTCGTATACGC+AGG + contig185end:30229-30248 MsG0080048058.01.T01:intron 30.0%
TTAATCCGTATGTTCATTTC+GGG + contig185end:27728-27747 MsG0080048058.01.T01:five_prime_UTR 30.0%
TTAGCATATGGTTAAAGTGA+TGG - contig185end:29131-29150 None:intergenic 30.0%
TTATCAGAATAATGGCTGAA+GGG + contig185end:30960-30979 MsG0080048058.01.T01:CDS 30.0%
! AGGTTGTATCTTTTTGTCAT+TGG + contig185end:27462-27481 MsG0080048058.01.T01:five_prime_UTR 30.0%
! ATGAGTTGAAAAATTGGTGA+AGG + contig185end:27378-27397 MsG0080048058.01.T01:five_prime_UTR 30.0%
! ATTTTTGATGCTGATGATAG+AGG + contig185end:27592-27611 MsG0080048058.01.T01:five_prime_UTR 30.0%
! CATGAATCTAAAACTGAACA+TGG + contig185end:28911-28930 MsG0080048058.01.T01:intron 30.0%
! GTTGTTGAAGATTTTGTATG+AGG - contig185end:29883-29902 None:intergenic 30.0%
! TTTTTGATGCTGATGATAGA+GGG + contig185end:27593-27612 MsG0080048058.01.T01:five_prime_UTR 30.0%
! TTTTTGTTCAACACTTGAAC+TGG + contig185end:26892-26911 MsG0080048058.01.T01:five_prime_UTR 30.0%
!! AATTTTTCAACTCATCACTC+GGG - contig185end:27373-27392 None:intergenic 30.0%
!! CAATTTTTCAACTCATCACT+CGG - contig185end:27374-27393 None:intergenic 30.0%
!! CATTTTGATGTTGAATTGGT+TGG + contig185end:27643-27662 MsG0080048058.01.T01:five_prime_UTR 30.0%
!! GTTTTAATAATTGCGGTCTA+TGG + contig185end:28795-28814 MsG0080048058.01.T01:intron 30.0%
!! TGATTAAGTATTTGGTTCTG+TGG + contig185end:28217-28236 MsG0080048058.01.T01:CDS 30.0%
!! TTTCTGTTGACTCAAATTAG+TGG + contig185end:29657-29676 MsG0080048058.01.T01:intron 30.0%
!!! AGTGTAAGTAGTTTTGTGTA+AGG - contig185end:26841-26860 None:intergenic 30.0%
!!! CACTATTTTTGATTGAGAAG+AGG - contig185end:31095-31114 None:intergenic 30.0%
!!! GGAATCATGGTTTTAAATTG+TGG - contig185end:28886-28905 None:intergenic 30.0%
!!! TAAGGTTTTGGATTTGGATT+TGG - contig185end:27038-27057 None:intergenic 30.0%
!!! TGATGTTTTGAGAGGTTATT+GGG + contig185end:28068-28087 MsG0080048058.01.T01:CDS 30.0%
!!! TGTTCAGTTTTAGATTCATG+TGG - contig185end:28911-28930 None:intergenic 30.0%
!!! TTTTTTCATTTCCTGTTTCC+AGG + contig185end:29485-29504 MsG0080048058.01.T01:intron 30.0%
AAATACATTCGTATACGCAG+GGG + contig185end:30231-30250 MsG0080048058.01.T01:intron 35.0%
AAGGTTGAGGTTACTTGTTT+GGG - contig185end:26822-26841 None:intergenic 35.0%
ACTTGGGTAAATCATCTACA+CGG + contig185end:31069-31088 MsG0080048058.01.T01:three_prime_UTR 35.0%
AGTAAGTTTCACATCCTTGT+CGG - contig185end:28316-28335 None:intergenic 35.0%
ATAAAGCAACCTCCATTCAA+GGG - contig185end:28595-28614 None:intergenic 35.0%
ATCATGCAAACACAAGAACT+GGG - contig185end:29845-29864 None:intergenic 35.0%
ATTGGATGAACAAGCGAATT+TGG + contig185end:27480-27499 MsG0080048058.01.T01:five_prime_UTR 35.0%
CAAACTGTGGATCACTAATA+AGG + contig185end:29612-29631 MsG0080048058.01.T01:CDS 35.0%
CATGAAAAGGGAATTGTAGA+GGG + contig185end:29377-29396 MsG0080048058.01.T01:intron 35.0%
CCAATTTCTTATCGGAGAAA+TGG + contig185end:27324-27343 MsG0080048058.01.T01:five_prime_UTR 35.0%
CCATTTCTCCGATAAGAAAT+TGG - contig185end:27327-27346 None:intergenic 35.0%
CCTTTCAAACCAATTCCATT+AGG - contig185end:30994-31013 None:intergenic 35.0%
CTATTGGAACTTACTACAAG+CGG + contig185end:29582-29601 MsG0080048058.01.T01:CDS 35.0%
CTTATCAGAATAATGGCTGA+AGG + contig185end:30959-30978 MsG0080048058.01.T01:CDS 35.0%
CTTATTAGTGATCCACAGTT+TGG - contig185end:29614-29633 None:intergenic 35.0%
GAAAAATTGGTGAAGGTGAA+GGG + contig185end:27385-27404 MsG0080048058.01.T01:five_prime_UTR 35.0%
GGATAATGATTCTGTATCTG+CGG - contig185end:29920-29939 None:intergenic 35.0%
GGATTAACAACAGTCCTATT+AGG - contig185end:27715-27734 None:intergenic 35.0%
GGATTTGGATTTGGATTTGA+TGG - contig185end:27029-27048 None:intergenic 35.0%
GTATGAGTAAAACGGTTTGT+AGG - contig185end:27080-27099 None:intergenic 35.0%
GTTCTCGAAACAAAGTAAAG+CGG - contig185end:27219-27238 None:intergenic 35.0%
TAAAACAGAAGACCAAGACT+CGG - contig185end:30546-30565 None:intergenic 35.0%
TAAGGTTGAGGTTACTTGTT+TGG - contig185end:26823-26842 None:intergenic 35.0%
TATAAAGGGTCCTCAGAAAA+AGG + contig185end:30322-30341 MsG0080048058.01.T01:intron 35.0%
TATCAGAATAATGGCTGAAG+GGG + contig185end:30961-30980 MsG0080048058.01.T01:CDS 35.0%
TATCATGCAAACACAAGAAC+TGG - contig185end:29846-29865 None:intergenic 35.0%
TCAGATGGAGAAAAACTTTC+GGG + contig185end:28523-28542 MsG0080048058.01.T01:CDS 35.0%
TCATAGATATGATAGGGTTG+AGG + contig185end:28146-28165 MsG0080048058.01.T01:CDS 35.0%
TCATATCTATGAACAGTAGG+TGG - contig185end:28138-28157 None:intergenic 35.0%
TCATGAAAAGGGAATTGTAG+AGG + contig185end:29376-29395 MsG0080048058.01.T01:intron 35.0%
TCCATTGAGACAAAGAACAT+AGG - contig185end:30800-30819 None:intergenic 35.0%
TCCTATGTTCTTTGTCTCAA+TGG + contig185end:30796-30815 MsG0080048058.01.T01:CDS 35.0%
TGAAAAATTGGTGAAGGTGA+AGG + contig185end:27384-27403 MsG0080048058.01.T01:five_prime_UTR 35.0%
TTAATAATTGCGGTCTATGG+CGG + contig185end:28798-28817 MsG0080048058.01.T01:intron 35.0%
TTGGATGAACAAGCGAATTT+GGG + contig185end:27481-27500 MsG0080048058.01.T01:five_prime_UTR 35.0%
! AAATCACTAATTAAGCGCTG+AGG - contig185end:30722-30741 None:intergenic 35.0%
! AAGATTTTGTATGAGGAGGA+GGG - contig185end:29876-29895 None:intergenic 35.0%
! AGAAGGATTTTTATTCCTGC+AGG + contig185end:29543-29562 MsG0080048058.01.T01:CDS 35.0%
! CGAGTGATGAGTTGAAAAAT+TGG + contig185end:27372-27391 MsG0080048058.01.T01:five_prime_UTR 35.0%
! CTGTTTCTTAATACTAGCTC+AGG + contig185end:31020-31039 MsG0080048058.01.T01:three_prime_UTR 35.0%
! GAAAGGATTTGGAATAGAGA+TGG + contig185end:29293-29312 MsG0080048058.01.T01:intron 35.0%
! GGAAGAAGTGCGTATAAAAA+GGG + contig185end:30347-30366 MsG0080048058.01.T01:intron 35.0%
! GTTGAAGATTTTGTATGAGG+AGG - contig185end:29880-29899 None:intergenic 35.0%
! TTGAATGGAGGTTGCTTTAT+GGG + contig185end:28595-28614 MsG0080048058.01.T01:CDS 35.0%
! TTTTACAAGGAAATCGGGTT+TGG + contig185end:27897-27916 MsG0080048058.01.T01:five_prime_UTR 35.0%
! TTTTGATGCTGATGATAGAG+GGG + contig185end:27594-27613 MsG0080048058.01.T01:five_prime_UTR 35.0%
!! CCTAATGGAATTGGTTTGAA+AGG + contig185end:30991-31010 MsG0080048058.01.T01:exon 35.0%
!! CGTTATTTTGTCGGAAAAGA+AGG + contig185end:28635-28654 MsG0080048058.01.T01:CDS 35.0%
!! TAATTGACTTGAAAGTGAGC+TGG - contig185end:30638-30657 None:intergenic 35.0%
!!! AAATATTTTTGGCAGGTACC+TGG - contig185end:29506-29525 None:intergenic 35.0%
!!! AGTAGTTTTGTGTAAGGTTG+AGG - contig185end:26835-26854 None:intergenic 35.0%
!!! CAATTTTGGCTGCAAAATAG+AGG - contig185end:28853-28872 None:intergenic 35.0%
!!! CAGAAGTGTCGTTATTTTGT+CGG + contig185end:28626-28645 MsG0080048058.01.T01:CDS 35.0%
!!! CAGTTTTAGATTCATGTGGA+TGG - contig185end:28907-28926 None:intergenic 35.0%
!!! CTGATGTTTTGAGAGGTTAT+TGG + contig185end:28067-28086 MsG0080048058.01.T01:CDS 35.0%
!!! CTTGGTCTTCTGTTTTAACT+GGG + contig185end:30549-30568 MsG0080048058.01.T01:CDS 35.0%
!!! GAAGTGTTGGTTTGTGTTTT+TGG - contig185end:26958-26977 None:intergenic 35.0%
!!! GATGTTTTGAGAGGTTATTG+GGG + contig185end:28069-28088 MsG0080048058.01.T01:CDS 35.0%
!!! TCTTGGTCTTCTGTTTTAAC+TGG + contig185end:30548-30567 MsG0080048058.01.T01:CDS 35.0%
!!! TTGGTCTTCTGTTTTAACTG+GGG + contig185end:30550-30569 MsG0080048058.01.T01:CDS 35.0%
AAAACAGAAGACCAAGACTC+GGG - contig185end:30545-30564 None:intergenic 40.0%
AAAAGGGAATTGTAGAGGGA+AGG + contig185end:29381-29400 MsG0080048058.01.T01:intron 40.0%
AACATGGACCCTTCACAATT+TGG + contig185end:28927-28946 MsG0080048058.01.T01:intron 40.0%
AAGATCTTTCTCCTCCGAAA+AGG - contig185end:28178-28197 None:intergenic 40.0%
AAGCGGATAAAACCAAACTG+TGG + contig185end:29599-29618 MsG0080048058.01.T01:CDS 40.0%
AAGTGATTGATGGGGATTTG+GGG + contig185end:27617-27636 MsG0080048058.01.T01:five_prime_UTR 40.0%
ACAAGCAAGCATGGTACAAA+AGG + contig185end:30598-30617 MsG0080048058.01.T01:CDS 40.0%
ACTAAGCTGCGTATTAGTGA+TGG + contig185end:28761-28780 MsG0080048058.01.T01:intron 40.0%
ACTTGTATGCTTGGTCCAAA+TGG - contig185end:28686-28705 None:intergenic 40.0%
AGAGGGAAAATGAAAGCTAG+TGG - contig185end:30496-30515 None:intergenic 40.0%
AGATCTTTCTCCTCCGAAAA+GGG - contig185end:28177-28196 None:intergenic 40.0%
ATAGAGGGGAAGTGATTGAT+GGG + contig185end:27608-27627 MsG0080048058.01.T01:five_prime_UTR 40.0%
CAAACCAATTCCATTAGGAG+TGG - contig185end:30989-31008 None:intergenic 40.0%
CATAAAGCAACCTCCATTCA+AGG - contig185end:28596-28615 None:intergenic 40.0%
CTTGGATTTGAGCTATGCAA+TGG + contig185end:28272-28291 MsG0080048058.01.T01:CDS 40.0%
CTTTGCCCGAAATGAACATA+CGG - contig185end:27736-27755 None:intergenic 40.0%
GAAGTGATTGATGGGGATTT+GGG + contig185end:27616-27635 MsG0080048058.01.T01:five_prime_UTR 40.0%
GATCAATTTAGCAGTGCAGA+AGG + contig185end:29526-29545 MsG0080048058.01.T01:CDS 40.0%
GATTCATGTGGATGGAATCA+TGG - contig185end:28899-28918 None:intergenic 40.0%
GGAAACAGTTTATTCAGCAG+GGG + contig185end:27836-27855 MsG0080048058.01.T01:five_prime_UTR 40.0%
GGGAAACAGTTTATTCAGCA+GGG + contig185end:27835-27854 MsG0080048058.01.T01:five_prime_UTR 40.0%
GTGCGTATAAAAAGGGATAG+AGG + contig185end:30354-30373 MsG0080048058.01.T01:intron 40.0%
GTTATCTCAACAAGCAAGCA+TGG + contig185end:30589-30608 MsG0080048058.01.T01:CDS 40.0%
TAACAAATCCTGAAGCCAAG+CGG - contig185end:28340-28359 None:intergenic 40.0%
TAGGAATTGCAACCTTCTGA+TGG - contig185end:30781-30800 None:intergenic 40.0%
TAGTGCTCATTTAGGGACAA+AGG - contig185end:30121-30140 None:intergenic 40.0%
TCTCAGAACTGCATAACAAG+AGG - contig185end:30688-30707 None:intergenic 40.0%
TCTTCCAAAGTTTCCATTGG+TGG - contig185end:29194-29213 None:intergenic 40.0%
TGCTCTTCCAAAGTTTCCAT+TGG - contig185end:29197-29216 None:intergenic 40.0%
TGGAAAATGTGGGTGAGATT+GGG + contig185end:27782-27801 MsG0080048058.01.T01:five_prime_UTR 40.0%
TGGATGAACAAGCGAATTTG+GGG + contig185end:27482-27501 MsG0080048058.01.T01:five_prime_UTR 40.0%
TGGGAAACAGTTTATTCAGC+AGG + contig185end:27834-27853 MsG0080048058.01.T01:five_prime_UTR 40.0%
TGTTCATTTCGGGCAAAGAT+CGG + contig185end:27738-27757 MsG0080048058.01.T01:five_prime_UTR 40.0%
TTATGGGCAATAGAAGACTG+AGG + contig185end:28961-28980 MsG0080048058.01.T01:intron 40.0%
TTGGAAAATGTGGGTGAGAT+TGG + contig185end:27781-27800 MsG0080048058.01.T01:five_prime_UTR 40.0%
TTTACACTCAGGTGTTTGGT+GGG + contig185end:27815-27834 MsG0080048058.01.T01:five_prime_UTR 40.0%
TTTGAGCTGAAGAATGCTCT+TGG - contig185end:27004-27023 None:intergenic 40.0%
! AACAAGCGAATTTGGGGTTT+AGG + contig185end:27488-27507 MsG0080048058.01.T01:five_prime_UTR 40.0%
! AAGATTTTCGGATGCCCATA+CGG - contig185end:27120-27139 None:intergenic 40.0%
! ACAAGCGAATTTGGGGTTTA+GGG + contig185end:27489-27508 MsG0080048058.01.T01:five_prime_UTR 40.0%
! AGATTTTGTATGAGGAGGAG+GGG - contig185end:29875-29894 None:intergenic 40.0%
! AGTTCCAAAGACATTAGCCT+TGG - contig185end:28381-28400 None:intergenic 40.0%
! ATCTCACCCACATTTTCCAA+CGG - contig185end:27781-27800 None:intergenic 40.0%
! CAACTTCAACTAGTTTGGTG+TGG - contig185end:26774-26793 None:intergenic 40.0%
! CGGAAGAAGTGCGTATAAAA+AGG + contig185end:30346-30365 MsG0080048058.01.T01:intron 40.0%
! CTTGAATGGAGGTTGCTTTA+TGG + contig185end:28594-28613 MsG0080048058.01.T01:CDS 40.0%
! CTTTCATTTTCCCTCTCTGA+CGG + contig185end:30500-30519 MsG0080048058.01.T01:intron 40.0%
! CTTTTCTTCCTACGTAACGT+TGG + contig185end:27185-27204 MsG0080048058.01.T01:five_prime_UTR 40.0%
! GAAGATTTTGTATGAGGAGG+AGG - contig185end:29877-29896 None:intergenic 40.0%
! GAGTTTTACACTCAGGTGTT+TGG + contig185end:27811-27830 MsG0080048058.01.T01:five_prime_UTR 40.0%
! GCATGAAGAGTTTTACACTC+AGG + contig185end:27804-27823 MsG0080048058.01.T01:five_prime_UTR 40.0%
! TGCTTGTTGAGATAACCAGT+CGG - contig185end:30585-30604 None:intergenic 40.0%
! TTTTACACTCAGGTGTTTGG+TGG + contig185end:27814-27833 MsG0080048058.01.T01:five_prime_UTR 40.0%
! TTTTATACGCACTTCTTCCG+TGG - contig185end:30346-30365 None:intergenic 40.0%
!! AGGCTAATGTCTTTGGAACT+TGG + contig185end:28381-28400 MsG0080048058.01.T01:CDS 40.0%
!! ATGGCTTCTGATGTTTTGAG+AGG + contig185end:28060-28079 MsG0080048058.01.T01:CDS 40.0%
!! CTTCAGGATTTGTTAGCTGT+TGG + contig185end:28345-28364 MsG0080048058.01.T01:CDS 40.0%
!! GATGTTGAATTGGTTGGTGA+AGG + contig185end:27649-27668 MsG0080048058.01.T01:five_prime_UTR 40.0%
!! GGATGTAGATCTTGTTGTTC+AGG + contig185end:28656-28675 MsG0080048058.01.T01:CDS 40.0%
!! GTATTTGGTTCTGTGGAGAT+CGG + contig185end:28224-28243 MsG0080048058.01.T01:CDS 40.0%
!! TGTAGATCTTGTTGTTCAGG+AGG + contig185end:28659-28678 MsG0080048058.01.T01:CDS 40.0%
!! TGTATCATTCGCCTGCTTTT+TGG + contig185end:28007-28026 MsG0080048058.01.T01:CDS 40.0%
!! TTTTTGGGCTTTGATGCTTC+CGG + contig185end:28023-28042 MsG0080048058.01.T01:CDS 40.0%
!!! GTATCATTCGCCTGCTTTTT+GGG + contig185end:28008-28027 MsG0080048058.01.T01:CDS 40.0%
AAGGGTCCTCAGAAAAAGGA+CGG + contig185end:30326-30345 MsG0080048058.01.T01:intron 45.0%
AAGTTGCCGTCTGTTCATCT+TGG + contig185end:28456-28475 MsG0080048058.01.T01:CDS 45.0%
AATTGGTGAAGGTGAAGGGT+TGG + contig185end:27389-27408 MsG0080048058.01.T01:five_prime_UTR 45.0%
ACAGGGCTTACTTGTATGCT+TGG - contig185end:28695-28714 None:intergenic 45.0%
AGAGTCGATGAATTAGTCGG+AGG - contig185end:30875-30894 None:intergenic 45.0%
AGCATCAAAGCCCAAAAAGC+AGG - contig185end:28021-28040 None:intergenic 45.0%
AGGTTTGCCGTTGGAAAATG+TGG + contig185end:27771-27790 MsG0080048058.01.T01:five_prime_UTR 45.0%
AGTTGCCGTCTGTTCATCTT+GGG + contig185end:28457-28476 MsG0080048058.01.T01:CDS 45.0%
ATGGATCGTGGTTTCGGTTT+CGG + contig185end:27343-27362 MsG0080048058.01.T01:five_prime_UTR 45.0%
ATGTGAAACTTACTGCCGCT+TGG + contig185end:28322-28341 MsG0080048058.01.T01:CDS 45.0%
ATTCAGCAGGGGATTTCGAA+TGG + contig185end:27847-27866 MsG0080048058.01.T01:five_prime_UTR 45.0%
ATTTCGGGCAAAGATCGGTT+TGG + contig185end:27743-27762 MsG0080048058.01.T01:five_prime_UTR 45.0%
ATTTGATAAGCATGCGCCGA+AGG + contig185end:27936-27955 MsG0080048058.01.T01:five_prime_UTR 45.0%
CAATCGCCGATAGAAATTCG+CGG + contig185end:27297-27316 MsG0080048058.01.T01:five_prime_UTR 45.0%
CATCTTGGGGTTGAAGAAAC+AGG + contig185end:28471-28490 MsG0080048058.01.T01:CDS 45.0%
CTCACCACCAATGGAAACTT+TGG + contig185end:29187-29206 MsG0080048058.01.T01:intron 45.0%
CTCGAAACAAAGTAAAGCGG+CGG - contig185end:27216-27235 None:intergenic 45.0%
CTTATCGGAGAAATGGATCG+TGG + contig185end:27331-27350 MsG0080048058.01.T01:five_prime_UTR 45.0%
GATAGAGGGGAAGTGATTGA+TGG + contig185end:27607-27626 MsG0080048058.01.T01:five_prime_UTR 45.0%
GCGGTACGCCAATTTCTTAT+CGG + contig185end:27316-27335 MsG0080048058.01.T01:five_prime_UTR 45.0%
GGAAGTGATTGATGGGGATT+TGG + contig185end:27615-27634 MsG0080048058.01.T01:five_prime_UTR 45.0%
GGAGAAATGGATCGTGGTTT+CGG + contig185end:27337-27356 MsG0080048058.01.T01:five_prime_UTR 45.0%
GGATCCACTCCTAATGGAAT+TGG + contig185end:30982-31001 MsG0080048058.01.T01:CDS 45.0%
GGTTACGACGAGAAGAATGA+CGG - contig185end:27156-27175 None:intergenic 45.0%
GGTTACTTGTTTGGGTGTGT+CGG - contig185end:26814-26833 None:intergenic 45.0%
GGTTTGCCGTTGGAAAATGT+GGG + contig185end:27772-27791 MsG0080048058.01.T01:five_prime_UTR 45.0%
GTGGATACTTAGCTCCTGTT+TGG + contig185end:29676-29695 MsG0080048058.01.T01:intron 45.0%
TAGAGGGGAAGTGATTGATG+GGG + contig185end:27609-27628 MsG0080048058.01.T01:five_prime_UTR 45.0%
TCAACCCCAAGATGAACAGA+CGG - contig185end:28465-28484 None:intergenic 45.0%
TGCAGCCAAAATTGCAGTTG+TGG + contig185end:28859-28878 MsG0080048058.01.T01:intron 45.0%
TGCTCACTTGATACACTCCA+TGG - contig185end:30926-30945 None:intergenic 45.0%
TGCTCTTGGACCAACATTGA+AGG - contig185end:26990-27009 None:intergenic 45.0%
TGTTGTTCAGGAGGTCCATT+TGG + contig185end:28668-28687 MsG0080048058.01.T01:CDS 45.0%
TTTCTGTCTCTCTGTCTGTG+TGG + contig185end:26862-26881 MsG0080048058.01.T01:five_prime_UTR 45.0%
TTTGAGCTATGCAATGGCAG+AGG + contig185end:28278-28297 MsG0080048058.01.T01:CDS 45.0%
TTTGTGGGATAAACTCCCTC+TGG - contig185end:28437-28456 None:intergenic 45.0%
! ACACAAGAACTGGGCTTGTT+TGG - contig185end:29836-29855 None:intergenic 45.0%
! ATTTTGTTCCAATCGACGCG+TGG - contig185end:27272-27291 None:intergenic 45.0%
! CACAAGAACTGGGCTTGTTT+GGG - contig185end:29835-29854 None:intergenic 45.0%
! CTTCTTCCGTCCTTTTTCTG+AGG - contig185end:30335-30354 None:intergenic 45.0%
! GAACAGACGGCAACTTTTGT+GGG - contig185end:28452-28471 None:intergenic 45.0%
! GATTGGTGATTCGAGAACTC+CGG + contig185end:27423-27442 MsG0080048058.01.T01:five_prime_UTR 45.0%
! GGTTGAGGCTTATCCCTTTT+CGG + contig185end:28161-28180 MsG0080048058.01.T01:CDS 45.0%
! GTGGTCCACAACTGCAATTT+TGG - contig185end:28867-28886 None:intergenic 45.0%
! TGAACAGACGGCAACTTTTG+TGG - contig185end:28453-28472 None:intergenic 45.0%
! TTTTCCAACGGCAAACCTCT+CGG - contig185end:27769-27788 None:intergenic 45.0%
!! AATTGGTTGGTGAAGGTGCT+AGG + contig185end:27656-27675 MsG0080048058.01.T01:five_prime_UTR 45.0%
!! GGATTTTGATGTCGCTGCAA+TGG - contig185end:28832-28851 None:intergenic 45.0%
!! TAGGAAGAAAAGTGCTGCGA+CGG - contig185end:27177-27196 None:intergenic 45.0%
!!! CGTATACGCAGGGGTATTTT+AGG + contig185end:30240-30259 MsG0080048058.01.T01:intron 45.0%
AAGTCCCTGCTGTTCATCCA+TGG + contig185end:30906-30925 MsG0080048058.01.T01:CDS 50.0%
ACACTCCATGGATGAACAGC+AGG - contig185end:30914-30933 None:intergenic 50.0%
ACAGCATGACTCACCACCAA+TGG + contig185end:29178-29197 MsG0080048058.01.T01:intron 50.0%
AGAACCTCGACTTCTCCGTA+TGG + contig185end:27102-27121 MsG0080048058.01.T01:five_prime_UTR 50.0%
AGCTATGCAATGGCAGAGGA+GGG + contig185end:28282-28301 MsG0080048058.01.T01:CDS 50.0%
ATTGGGGACAGAGGCTTCTT+TGG + contig185end:28085-28104 MsG0080048058.01.T01:CDS 50.0%
CACTCCATGGATGAACAGCA+GGG - contig185end:30913-30932 None:intergenic 50.0%
CCCAATGAATCCGTCAGAGA+GGG - contig185end:30513-30532 None:intergenic 50.0%
CCTTGAGGCAATGCAACCTT+CGG - contig185end:27955-27974 None:intergenic 50.0%
CCTTTCAAACTCCAATCCGC+CGG - contig185end:27445-27464 None:intergenic 50.0%
CGCGAATTTCTATCGGCGAT+TGG - contig185end:27299-27318 None:intergenic 50.0%
GAACCTCGACTTCTCCGTAT+GGG + contig185end:27103-27122 MsG0080048058.01.T01:five_prime_UTR 50.0%
GCAGCCAAGGCTAATGTCTT+TGG + contig185end:28374-28393 MsG0080048058.01.T01:CDS 50.0%
GCCATCCTACTAACCGAAAC+CGG - contig185end:28045-28064 None:intergenic 50.0%
GGCGTACCGCGAATTTCTAT+CGG - contig185end:27306-27325 None:intergenic 50.0%
GTGCTCATCATGCATTGCAG+CGG + contig185end:28552-28571 MsG0080048058.01.T01:CDS 50.0%
GTTGCCGTCTGTTCATCTTG+GGG + contig185end:28458-28477 MsG0080048058.01.T01:CDS 50.0%
TCCCAATGAATCCGTCAGAG+AGG - contig185end:30514-30533 None:intergenic 50.0%
TCCGGTTTCGGTTAGTAGGA+TGG + contig185end:28041-28060 MsG0080048058.01.T01:CDS 50.0%
TGAAGGGGATCCACTCCTAA+TGG + contig185end:30976-30995 MsG0080048058.01.T01:CDS 50.0%
TGAGAGGTTATTGGGGACAG+AGG + contig185end:28076-28095 MsG0080048058.01.T01:CDS 50.0%
TGCTCATCATGCATTGCAGC+GGG + contig185end:28553-28572 MsG0080048058.01.T01:CDS 50.0%
TGCTTCCGGTTTCGGTTAGT+AGG + contig185end:28037-28056 MsG0080048058.01.T01:CDS 50.0%
TGGATCGTGGTTTCGGTTTC+GGG + contig185end:27344-27363 MsG0080048058.01.T01:five_prime_UTR 50.0%
TTGGGGACAGAGGCTTCTTT+GGG + contig185end:28086-28105 MsG0080048058.01.T01:CDS 50.0%
TTTGGCAGGTACCTGGAAAC+AGG - contig185end:29499-29518 None:intergenic 50.0%
! AGGCTTCTTTGGGAAGTTGG+TGG + contig185end:28096-28115 MsG0080048058.01.T01:CDS 50.0%
! CAATGGCAGAGGAGGGTTTT+TGG + contig185end:28289-28308 MsG0080048058.01.T01:CDS 50.0%
! CAGAGGCTTCTTTGGGAAGT+TGG + contig185end:28093-28112 MsG0080048058.01.T01:CDS 50.0%
! CTGTTGGTTATCAGCAGCCA+AGG + contig185end:28361-28380 MsG0080048058.01.T01:CDS 50.0%
! GGCTTTGATGCTTCCGGTTT+CGG + contig185end:28029-28048 MsG0080048058.01.T01:CDS 50.0%
! TGAGGCTTATCCCTTTTCGG+AGG + contig185end:28164-28183 MsG0080048058.01.T01:CDS 50.0%
!! CCCTCTCTGACGGATTCATT+GGG + contig185end:30510-30529 MsG0080048058.01.T01:intron 50.0%
!! TCCCTCTCTGACGGATTCAT+TGG + contig185end:30509-30528 MsG0080048058.01.T01:intron 50.0%
!! TGACGGATTCATTGGGATCC+AGG + contig185end:30517-30536 MsG0080048058.01.T01:intron 50.0%
AAGACCAAGACTCGGGTACC+TGG - contig185end:30538-30557 None:intergenic 55.0%
ACCGGCATCATCACACCTTG+AGG - contig185end:27970-27989 None:intergenic 55.0%
ATGCCCATACGGAGAAGTCG+AGG - contig185end:27109-27128 None:intergenic 55.0%
ATTCGAGAACTCCGGCGGAT+TGG + contig185end:27431-27450 MsG0080048058.01.T01:five_prime_UTR 55.0%
CCGAAGGTTGCATTGCCTCA+AGG + contig185end:27952-27971 MsG0080048058.01.T01:five_prime_UTR 55.0%
CCGAGAGCAAACATTGGCGA+CGG + contig185end:28408-28427 MsG0080048058.01.T01:CDS 55.0%
CCGTCGCCAATGTTTGCTCT+CGG - contig185end:28411-28430 None:intergenic 55.0%
GAGCTATGCAATGGCAGAGG+AGG + contig185end:28281-28300 MsG0080048058.01.T01:CDS 55.0%
GGTCGTCCGAGAGCAAACAT+TGG + contig185end:28402-28421 MsG0080048058.01.T01:CDS 55.0%
TGGTGATTCGAGAACTCCGG+CGG + contig185end:27426-27445 MsG0080048058.01.T01:five_prime_UTR 55.0%
TTGAACGCACGGCCCTTGAA+TGG + contig185end:28580-28599 MsG0080048058.01.T01:CDS 55.0%
! ACTTACTGCCGCTTGGCTTC+AGG + contig185end:28329-28348 MsG0080048058.01.T01:CDS 55.0%
! GCCTCAAGGTGTGATGATGC+CGG + contig185end:27966-27985 MsG0080048058.01.T01:exon 55.0%
! TCGAGTATCCACGCGTCGAT+TGG + contig185end:27261-27280 MsG0080048058.01.T01:five_prime_UTR 55.0%
!! CAAAGATCGGTTTGGCCGAG+AGG + contig185end:27751-27770 MsG0080048058.01.T01:five_prime_UTR 55.0%
!! CCGGCGGATTGGAGTTTGAA+AGG + contig185end:27442-27461 MsG0080048058.01.T01:five_prime_UTR 55.0%
!! GGAGGGTTTTTGGACCGACA+AGG + contig185end:28299-28318 MsG0080048058.01.T01:CDS 55.0%
!! TGGTGAAGGTGCTAGGCAAG+AGG + contig185end:27663-27682 MsG0080048058.01.T01:five_prime_UTR 55.0%
AACGCACGGCCCTTGAATGG+AGG + contig185end:28583-28602 MsG0080048058.01.T01:CDS 60.0%
ACATTGGCGACGGAGACCAG+AGG + contig185end:28418-28437 MsG0080048058.01.T01:CDS 60.0%
CATTGGCGACGGAGACCAGA+GGG + contig185end:28419-28438 MsG0080048058.01.T01:CDS 60.0%
CTGGGGACAACAATGCCGAC+TGG + contig185end:30567-30586 MsG0080048058.01.T01:CDS 60.0%
GGATCCAGGTACCCGAGTCT+TGG + contig185end:30531-30550 MsG0080048058.01.T01:intron 60.0%
GGTTGGCAGGTTGTGGCGAT+TGG + contig185end:27406-27425 MsG0080048058.01.T01:five_prime_UTR 60.0%
TCAAGGGCCGTGCGTTCAAC+AGG - contig185end:28579-28598 None:intergenic 60.0%
TTGGCCGAGAGGTTTGCCGT+TGG + contig185end:27762-27781 MsG0080048058.01.T01:five_prime_UTR 60.0%
! GGTGAAGGGTTGGCAGGTTG+TGG + contig185end:27399-27418 MsG0080048058.01.T01:five_prime_UTR 60.0%
! GGTGAAGGTGAAGGGTTGGC+AGG + contig185end:27393-27412 MsG0080048058.01.T01:five_prime_UTR 60.0%
!! CGGTGTCGCCAACGTTACGT+AGG - contig185end:27196-27215 None:intergenic 60.0%
CAGCGGGCCTGTTGAACGCA+CGG + contig185end:28569-28588 MsG0080048058.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
contig185end gene 26770 31318 26770 ID=MsG0080048058.01;Name=MsG0080048058.01
contig185end mRNA 26770 31318 26770 ID=MsG0080048058.01.T01;Parent=MsG0080048058.01;Name=MsG0080048058.01.T01;_AED=0.22;_eAED=0.22;_QI=1209|1|1|1|1|1|3|309|440
contig185end exon 26770 28703 26770 ID=MsG0080048058.01.T01:exon:11281;Parent=MsG0080048058.01.T01
contig185end exon 29507 29633 29507 ID=MsG0080048058.01.T01:exon:11282;Parent=MsG0080048058.01.T01
contig185end exon 30539 31318 30539 ID=MsG0080048058.01.T01:exon:11283;Parent=MsG0080048058.01.T01
contig185end five_prime_UTR 26770 27978 26770 ID=MsG0080048058.01.T01:five_prime_utr;Parent=MsG0080048058.01.T01
contig185end CDS 27979 28703 27979 ID=MsG0080048058.01.T01:cds;Parent=MsG0080048058.01.T01
contig185end CDS 29507 29633 29507 ID=MsG0080048058.01.T01:cds;Parent=MsG0080048058.01.T01
contig185end CDS 30539 31009 30539 ID=MsG0080048058.01.T01:cds;Parent=MsG0080048058.01.T01
contig185end three_prime_UTR 31010 31318 31010 ID=MsG0080048058.01.T01:three_prime_utr;Parent=MsG0080048058.01.T01
Gene Sequence

>MsG0080048058.01.T01

ATGATGCCGGTTAATTCATTTAATACGATGTATCATTCGCCTGCTTTTTGGGCTTTGATGCTTCCGGTTTCGGTTAGTAGGATGGCTTCTGATGTTTTGAGAGGTTATTGGGGACAGAGGCTTCTTTGGGAAGTTGGTGGTTATGTTGCTGTTTATCCACCTACTGTTCATAGATATGATAGGGTTGAGGCTTATCCCTTTTCGGAGGAGAAAGATCTTCATGTGAATGTTGGTCGTTTGATTAAGTATTTGGTTCTGTGGAGATCGGATAAGCATAGATTGTTTGAGAAGATCTTGGATTTGAGCTATGCAATGGCAGAGGAGGGTTTTTGGACCGACAAGGATGTGAAACTTACTGCCGCTTGGCTTCAGGATTTGTTAGCTGTTGGTTATCAGCAGCCAAGGCTAATGTCTTTGGAACTTGGTCGTCCGAGAGCAAACATTGGCGACGGAGACCAGAGGGAGTTTATCCCACAAAAGTTGCCGTCTGTTCATCTTGGGGTTGAAGAAACAGGAACTGTGAATTATGAGATTGCTAATTTAATCAGATGGAGAAAAACTTTCGGGAATGTTGTGCTCATCATGCATTGCAGCGGGCCTGTTGAACGCACGGCCCTTGAATGGAGGTTGCTTTATGGGAGAATATTCAGAAGTGTCGTTATTTTGTCGGAAAAGAAGGATGTAGATCTTGTTGTTCAGGAGGTCCATTTGGACCAAGCATACAAGTACCTGCCAAAAATATTTGATCAATTTAGCAGTGCAGAAGGATTTTTATTCCTGCAGGATAATACAATTCTTAACTATTGGAACTTACTACAAGCGGATAAAACCAAACTGTGGATCACTAATAAGGTACCCGAGTCTTGGTCTTCTGTTTTAACTGGGGACAACAATGCCGACTGGTTATCTCAACAAGCAAGCATGGTACAAAAGGTTGTTAGCATGATGCCAGCTCACTTTCAAGTCAATTACAAAGACACAAGTAACAATGACAAGAACCTCTTGTTATGCAGTTCTGAGATATTCTATGTTCCTCAGCGCTTAATTAGTGATTTCGTTGACCTTGTTAACCTAGTAGACAATCTAGAGATCCATCAGAAGGTTGCAATTCCTATGTTCTTTGTCTCAATGGATTCTACACAGAATTTTGATCCTGTTCTTGATAAAACAATCTACAAGCAAGCTCCTCCGACTAATTCATCGACTCTTTATTCGGCTAAAGTCCCTGCTGTTCATCCATGGAGTGTATCAAGTGAGCAAGAATTTATTAAGCTTATCAGAATAATGGCTGAAGGGGATCCACTCCTAATGGAATTGGTTTGA

Protein sequence

>MsG0080048058.01.T01

MMPVNSFNTMYHSPAFWALMLPVSVSRMASDVLRGYWGQRLLWEVGGYVAVYPPTVHRYDRVEAYPFSEEKDLHVNVGRLIKYLVLWRSDKHRLFEKILDLSYAMAEEGFWTDKDVKLTAAWLQDLLAVGYQQPRLMSLELGRPRANIGDGDQREFIPQKLPSVHLGVEETGTVNYEIANLIRWRKTFGNVVLIMHCSGPVERTALEWRLLYGRIFRSVVILSEKKDVDLVVQEVHLDQAYKYLPKIFDQFSSAEGFLFLQDNTILNYWNLLQADKTKLWITNKVPESWSSVLTGDNNADWLSQQASMVQKVVSMMPAHFQVNYKDTSNNDKNLLLCSSEIFYVPQRLISDFVDLVNLVDNLEIHQKVAIPMFFVSMDSTQNFDPVLDKTIYKQAPPTNSSTLYSAKVPAVHPWSVSSEQEFIKLIRIMAEGDPLLMELV*