Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004881.01.T01 | XP_013469193.1 | 97.727 | 220 | 5 | 0 | 1 | 220 | 1 | 220 | 1.41E-160 | 452 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004881.01.T01 | Q9LZI9 | 56.221 | 217 | 95 | 0 | 1 | 217 | 1 | 217 | 6.40E-95 | 279 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004881.01.T01 | A0A072VNL4 | 97.727 | 220 | 5 | 0 | 1 | 220 | 1 | 220 | 6.72e-161 | 452 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0180004881.01 | MsG0280009757.01 | PPI |
| MsG0180004881.01 | MsG0280009756.01 | PPI |
| MsG0180004881.01 | MsG0180004880.01 | PPI |
| MsG0180004881.01 | MsG0280009758.01 | PPI |
| MsG0180004881.01 | MsG0180004879.01 | PPI |
| MsG0380013541.01 | MsG0180004881.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004881.01.T01 | MTR_1g088850 | 97.727 | 220 | 5 | 0 | 1 | 220 | 1 | 220 | 1.70e-164 | 452 |
| MsG0180004881.01.T01 | MTR_3g450790 | 48.571 | 210 | 105 | 3 | 1 | 209 | 1 | 208 | 2.65e-69 | 211 |
| MsG0180004881.01.T01 | MTR_3g450930 | 45.714 | 210 | 111 | 3 | 1 | 209 | 1 | 208 | 8.54e-63 | 195 |
| MsG0180004881.01.T01 | MTR_5g090920 | 44.076 | 211 | 114 | 4 | 1 | 209 | 1 | 209 | 1.29e-56 | 179 |
| MsG0180004881.01.T01 | MTR_1g088845 | 40.865 | 208 | 122 | 1 | 3 | 210 | 4 | 210 | 1.48e-56 | 179 |
| MsG0180004881.01.T01 | MTR_3g064700 | 43.062 | 209 | 117 | 2 | 1 | 208 | 1 | 208 | 3.73e-56 | 178 |
| MsG0180004881.01.T01 | MTR_1g088840 | 39.423 | 208 | 125 | 1 | 3 | 210 | 4 | 210 | 1.88e-55 | 176 |
| MsG0180004881.01.T01 | MTR_1g088825 | 39.423 | 208 | 125 | 1 | 3 | 210 | 4 | 210 | 1.88e-55 | 176 |
| MsG0180004881.01.T01 | MTR_5g090910 | 42.453 | 212 | 116 | 5 | 1 | 209 | 1 | 209 | 2.33e-54 | 173 |
| MsG0180004881.01.T01 | MTR_1g026140 | 37.736 | 212 | 127 | 1 | 3 | 209 | 5 | 216 | 5.31e-51 | 165 |
| MsG0180004881.01.T01 | MTR_1g088840 | 39.506 | 162 | 97 | 1 | 49 | 210 | 3 | 163 | 5.68e-41 | 137 |
| MsG0180004881.01.T01 | MTR_5g090910 | 41.497 | 147 | 81 | 4 | 66 | 209 | 8 | 152 | 2.27e-29 | 107 |
| MsG0180004881.01.T01 | MTR_1g088840 | 37.500 | 112 | 70 | 0 | 99 | 210 | 3 | 114 | 1.64e-24 | 94.0 |
| MsG0180004881.01.T01 | MTR_4g134770 | 26.316 | 228 | 144 | 5 | 1 | 219 | 1 | 213 | 2.99e-14 | 71.2 |
| MsG0180004881.01.T01 | MTR_3g058940 | 27.358 | 212 | 143 | 5 | 1 | 210 | 1 | 203 | 1.28e-13 | 69.3 |
| MsG0180004881.01.T01 | MTR_1g492670 | 42.188 | 64 | 37 | 0 | 147 | 210 | 2 | 65 | 2.62e-12 | 60.5 |
| MsG0180004881.01.T01 | MTR_2g005570 | 27.053 | 207 | 130 | 5 | 11 | 210 | 13 | 205 | 8.30e-12 | 63.9 |
| MsG0180004881.01.T01 | MTR_2g005570 | 27.184 | 206 | 131 | 5 | 11 | 210 | 13 | 205 | 1.09e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004881.01.T01 | AT3G62760 | 56.221 | 217 | 95 | 0 | 1 | 217 | 1 | 217 | 6.52e-96 | 279 |
| MsG0180004881.01.T01 | AT1G02930 | 41.827 | 208 | 119 | 1 | 2 | 209 | 3 | 208 | 2.16e-58 | 183 |
| MsG0180004881.01.T01 | AT1G02930 | 41.827 | 208 | 119 | 1 | 2 | 209 | 3 | 208 | 2.16e-58 | 183 |
| MsG0180004881.01.T01 | AT1G02920 | 41.346 | 208 | 121 | 1 | 2 | 209 | 3 | 209 | 2.31e-56 | 178 |
| MsG0180004881.01.T01 | AT2G30860 | 43.721 | 215 | 118 | 3 | 1 | 214 | 1 | 213 | 3.38e-55 | 176 |
| MsG0180004881.01.T01 | AT2G47730 | 41.951 | 205 | 119 | 0 | 5 | 209 | 54 | 258 | 2.16e-54 | 175 |
| MsG0180004881.01.T01 | AT2G47730 | 41.951 | 205 | 119 | 0 | 5 | 209 | 54 | 258 | 2.16e-54 | 175 |
| MsG0180004881.01.T01 | AT4G02520 | 40.476 | 210 | 121 | 2 | 2 | 208 | 3 | 211 | 1.70e-53 | 171 |
| MsG0180004881.01.T01 | AT2G30870 | 43.541 | 209 | 115 | 3 | 1 | 208 | 1 | 207 | 8.15e-53 | 169 |
| MsG0180004881.01.T01 | AT2G02930 | 39.524 | 210 | 125 | 1 | 2 | 209 | 3 | 212 | 1.01e-52 | 169 |
| MsG0180004881.01.T01 | AT1G02950 | 35.437 | 206 | 133 | 0 | 1 | 206 | 23 | 228 | 2.78e-49 | 161 |
| MsG0180004881.01.T01 | AT1G02950 | 35.437 | 206 | 133 | 0 | 1 | 206 | 23 | 228 | 2.78e-49 | 161 |
| MsG0180004881.01.T01 | AT3G03190 | 37.619 | 210 | 129 | 2 | 1 | 209 | 1 | 209 | 4.17e-49 | 160 |
| MsG0180004881.01.T01 | AT1G02950 | 35.437 | 206 | 133 | 0 | 1 | 206 | 35 | 240 | 4.78e-49 | 161 |
| MsG0180004881.01.T01 | AT1G02950 | 35.961 | 203 | 130 | 0 | 4 | 206 | 28 | 230 | 5.81e-49 | 160 |
| MsG0180004881.01.T01 | AT1G49860 | 41.500 | 200 | 112 | 3 | 14 | 209 | 16 | 214 | 1.14e-47 | 157 |
| MsG0180004881.01.T01 | AT5G17220 | 33.333 | 210 | 138 | 2 | 1 | 209 | 1 | 209 | 5.91e-46 | 152 |
| MsG0180004881.01.T01 | AT1G02940 | 36.408 | 206 | 131 | 0 | 4 | 209 | 40 | 245 | 1.83e-45 | 152 |
| MsG0180004881.01.T01 | AT1G02940 | 36.408 | 206 | 131 | 0 | 4 | 209 | 40 | 245 | 1.83e-45 | 152 |
| MsG0180004881.01.T01 | AT1G02940 | 36.408 | 206 | 131 | 0 | 4 | 209 | 53 | 258 | 2.36e-45 | 152 |
| MsG0180004881.01.T01 | AT1G02940 | 36.408 | 206 | 131 | 0 | 4 | 209 | 65 | 270 | 2.78e-45 | 152 |
| MsG0180004881.01.T01 | AT2G30860 | 40.000 | 155 | 91 | 2 | 1 | 155 | 1 | 153 | 3.78e-32 | 115 |
| MsG0180004881.01.T01 | AT1G02950 | 30.070 | 143 | 100 | 0 | 64 | 206 | 60 | 202 | 7.39e-26 | 100 |
| MsG0180004881.01.T01 | AT1G09640 | 26.415 | 212 | 146 | 5 | 1 | 210 | 1 | 204 | 1.13e-11 | 63.9 |
| MsG0180004881.01.T01 | AT1G57720 | 26.606 | 218 | 138 | 7 | 1 | 210 | 1 | 204 | 1.22e-11 | 63.5 |
| MsG0180004881.01.T01 | AT1G57720 | 26.606 | 218 | 138 | 7 | 1 | 210 | 1 | 204 | 1.22e-11 | 63.5 |
| MsG0180004881.01.T01 | AT1G09640 | 26.415 | 212 | 146 | 5 | 1 | 210 | 1 | 204 | 1.50e-11 | 62.8 |
Find 43 sgRNAs with CRISPR-Local
Find 65 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACTGACCTGTTTGGTTCT+TGG | 0.194862 | 1:-83923566 | None:intergenic |
| ATCATGGCACTCAAGATTTA+TGG | 0.277244 | 1:+83922776 | None:intergenic |
| ACAAAGTATTCATAGATAAT+TGG | 0.322317 | 1:-83923528 | None:intergenic |
| TTCAGCTACATATGAGGTTA+TGG | 0.327058 | 1:-83923394 | None:intergenic |
| GATGATGATCTCACCCTCTT+TGG | 0.366830 | 1:+83923028 | MsG0180004881.01.T01:CDS |
| CTTTCAATCACTGACCTGTT+TGG | 0.367204 | 1:-83923573 | None:intergenic |
| CAATGAACGGATTCATGTTA+AGG | 0.371100 | 1:+83923746 | MsG0180004881.01.T01:CDS |
| TTTGGTTCTTGGCCTTGAAA+TGG | 0.382658 | 1:-83923555 | None:intergenic |
| AAAATGGACCTGATTTGATT+AGG | 0.390014 | 1:+83923427 | MsG0180004881.01.T01:CDS |
| TACTTTGTGGTTCCATTTCA+AGG | 0.391654 | 1:+83923543 | MsG0180004881.01.T01:CDS |
| CTTACGTTCTTGTTGAGAAA+AGG | 0.412482 | 1:-83922908 | None:intergenic |
| GGTGGGAAGATATATCTTCT+AGG | 0.418080 | 1:+83923772 | MsG0180004881.01.T01:CDS |
| TCTTTGTTCATGCAGCCCTT+TGG | 0.422040 | 1:+83922986 | MsG0180004881.01.T01:intron |
| AGCACAACAAAATACCTTGC+AGG | 0.425763 | 1:+83923645 | MsG0180004881.01.T01:CDS |
| AATTATCTATGAATACTTTG+TGG | 0.442647 | 1:+83923530 | MsG0180004881.01.T01:CDS |
| TGACACAAAAGAAGCTTCAT+TGG | 0.444080 | 1:+83923455 | MsG0180004881.01.T01:CDS |
| TAGATAATTGGTGTGACTGC+AGG | 0.445936 | 1:-83923516 | None:intergenic |
| GTTGTGGGAGGTATGACCTT+TGG | 0.467331 | 1:+83923810 | MsG0180004881.01.T01:CDS |
| AGATCATCATCTTCAAGTAC+TGG | 0.467902 | 1:-83923016 | None:intergenic |
| GGCACTCAAGATTTATGGTC+TGG | 0.469062 | 1:+83922781 | MsG0180004881.01.T01:CDS |
| TTCAAGGCCAAGAACCAAAC+AGG | 0.470857 | 1:+83923559 | MsG0180004881.01.T01:CDS |
| TCATTGTGCCTAATCAAATC+AGG | 0.483923 | 1:-83923435 | None:intergenic |
| AACGGATTCATGTTAAGGCT+TGG | 0.491423 | 1:+83923751 | MsG0180004881.01.T01:CDS |
| GCACAACAAAATACCTTGCA+GGG | 0.513385 | 1:+83923646 | MsG0180004881.01.T01:CDS |
| ACGAGTGGTGTTTGTGGACA+TGG | 0.514578 | 1:-83922804 | None:intergenic |
| CATGGCACGAGTGGTGTTTG+TGG | 0.516433 | 1:-83922810 | None:intergenic |
| AATAGTGAGTTGAAGATATG+TGG | 0.530360 | 1:-83923695 | None:intergenic |
| GATTCATGTTAAGGCTTGGT+GGG | 0.536813 | 1:+83923755 | MsG0180004881.01.T01:CDS |
| GGATTCATGTTAAGGCTTGG+TGG | 0.539482 | 1:+83923754 | MsG0180004881.01.T01:CDS |
| AGATAATTGGTGTGACTGCA+GGG | 0.554379 | 1:-83923515 | None:intergenic |
| AAAAGAAAGCATACCAAAGA+GGG | 0.568007 | 1:-83923041 | None:intergenic |
| TCAGAAGCAAACACATTGAC+TGG | 0.571377 | 1:-83922872 | None:intergenic |
| ACGTTCTTGTTGAGAAAAGG+AGG | 0.590052 | 1:-83922905 | None:intergenic |
| AGTACTGGAATCAAACCAAA+GGG | 0.590562 | 1:-83923001 | None:intergenic |
| AAGCTTCATTGGTCAAAATG+TGG | 0.591373 | 1:+83923466 | MsG0180004881.01.T01:CDS |
| GTGCTTCAATGATCAATGAA+CGG | 0.607609 | 1:+83923733 | MsG0180004881.01.T01:CDS |
| ATTGATCATTGAAGCACAAG+GGG | 0.612739 | 1:-83923727 | None:intergenic |
| AAGTACTGGAATCAAACCAA+AGG | 0.617639 | 1:-83923002 | None:intergenic |
| TCATTGATCATTGAAGCACA+AGG | 0.633784 | 1:-83923729 | None:intergenic |
| CATTGATCATTGAAGCACAA+GGG | 0.636560 | 1:-83923728 | None:intergenic |
| CACAACAAAATACCTTGCAG+GGG | 0.673341 | 1:+83923647 | MsG0180004881.01.T01:CDS |
| TAGACATATCATGGCACGAG+TGG | 0.683620 | 1:-83922819 | None:intergenic |
| ATTGGTCAAAATGTGGACAG+AGG | 0.694356 | 1:+83923473 | MsG0180004881.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTCGAATAAACTTAAA+GGG | - | Chr1:83923106-83923125 | None:intergenic | 15.0% |
| !!! | TATTTTTCGAATAAACTTAA+AGG | - | Chr1:83923107-83923126 | None:intergenic | 15.0% |
| !! | AATTATCTATGAATACTTTG+TGG | + | Chr1:83923530-83923549 | MsG0180004881.01.T01:CDS | 20.0% |
| !! | GAATTAGTAACAAAAATTAG+AGG | - | Chr1:83923239-83923258 | None:intergenic | 20.0% |
| !!! | ACAAAGTATTCATAGATAAT+TGG | - | Chr1:83923531-83923550 | None:intergenic | 20.0% |
| ! | AATAGGTTACATATCATTAC+AGG | - | Chr1:83923337-83923356 | None:intergenic | 25.0% |
| ! | AATCAAGCAAAAATACTACT+AGG | + | Chr1:83923154-83923173 | MsG0180004881.01.T01:intron | 25.0% |
| ! | ATATGTAGCTGAAAAATACA+AGG | + | Chr1:83923404-83923423 | MsG0180004881.01.T01:CDS | 25.0% |
| ! | ATCATTACAGGTTCAAAAAA+TGG | - | Chr1:83923325-83923344 | None:intergenic | 25.0% |
| !! | TAACCTATTTTATGTGACTA+TGG | + | Chr1:83923348-83923367 | MsG0180004881.01.T01:intron | 25.0% |
| !! | TTTTTCATGTAGACATATCA+TGG | - | Chr1:83922831-83922850 | None:intergenic | 25.0% |
| AGTCCATAGTCACATAAAAT+AGG | - | Chr1:83923354-83923373 | None:intergenic | 30.0% | |
| GCTGAAAAATACAAGGAAAA+TGG | + | Chr1:83923411-83923430 | MsG0180004881.01.T01:CDS | 30.0% | |
| TTTCGAATAAACTTAAAGGG+TGG | - | Chr1:83923103-83923122 | None:intergenic | 30.0% | |
| ! | AAAAAGAAAGCATACCAAAG+AGG | - | Chr1:83923045-83923064 | None:intergenic | 30.0% |
| ! | AAAAGAAAGCATACCAAAGA+GGG | - | Chr1:83923044-83923063 | None:intergenic | 30.0% |
| ! | AAAATGGACCTGATTTGATT+AGG | + | Chr1:83923427-83923446 | MsG0180004881.01.T01:CDS | 30.0% |
| ! | AATAGTGAGTTGAAGATATG+TGG | - | Chr1:83923698-83923717 | None:intergenic | 30.0% |
| !! | GTATTTTTCAGCTACATATG+AGG | - | Chr1:83923403-83923422 | None:intergenic | 30.0% |
| AAGCTTCATTGGTCAAAATG+TGG | + | Chr1:83923466-83923485 | MsG0180004881.01.T01:CDS | 35.0% | |
| AGATCATCATCTTCAAGTAC+TGG | - | Chr1:83923019-83923038 | None:intergenic | 35.0% | |
| ATTGATCATTGAAGCACAAG+GGG | - | Chr1:83923730-83923749 | None:intergenic | 35.0% | |
| CATTGATCATTGAAGCACAA+GGG | - | Chr1:83923731-83923750 | None:intergenic | 35.0% | |
| CTTACGTTCTTGTTGAGAAA+AGG | - | Chr1:83922911-83922930 | None:intergenic | 35.0% | |
| GTGCTTCAATGATCAATGAA+CGG | + | Chr1:83923733-83923752 | MsG0180004881.01.T01:CDS | 35.0% | |
| TACTTTGTGGTTCCATTTCA+AGG | + | Chr1:83923543-83923562 | MsG0180004881.01.T01:CDS | 35.0% | |
| TCATTGATCATTGAAGCACA+AGG | - | Chr1:83923732-83923751 | None:intergenic | 35.0% | |
| TCATTGTGCCTAATCAAATC+AGG | - | Chr1:83923438-83923457 | None:intergenic | 35.0% | |
| TCTGCTTTCCAAAAAGTTGT+GGG | + | Chr1:83923795-83923814 | MsG0180004881.01.T01:CDS | 35.0% | |
| TGACACAAAAGAAGCTTCAT+TGG | + | Chr1:83923455-83923474 | MsG0180004881.01.T01:CDS | 35.0% | |
| TTCAGCTACATATGAGGTTA+TGG | - | Chr1:83923397-83923416 | None:intergenic | 35.0% | |
| ! | AGTACTGGAATCAAACCAAA+GGG | - | Chr1:83923004-83923023 | None:intergenic | 35.0% |
| ! | CAATGAACGGATTCATGTTA+AGG | + | Chr1:83923746-83923765 | MsG0180004881.01.T01:CDS | 35.0% |
| ! | TTTTTGATCACTCTGACCAA+AGG | - | Chr1:83923829-83923848 | None:intergenic | 35.0% |
| !! | AAGTACTGGAATCAAACCAA+AGG | - | Chr1:83923005-83923024 | None:intergenic | 35.0% |
| !! | GTATTTTGTTGTGCTTAGCT+TGG | - | Chr1:83923640-83923659 | None:intergenic | 35.0% |
| ACGTTCTTGTTGAGAAAAGG+AGG | - | Chr1:83922908-83922927 | None:intergenic | 40.0% | |
| AGATAATTGGTGTGACTGCA+GGG | - | Chr1:83923518-83923537 | None:intergenic | 40.0% | |
| AGCACAACAAAATACCTTGC+AGG | + | Chr1:83923645-83923664 | MsG0180004881.01.T01:CDS | 40.0% | |
| ATTGGTCAAAATGTGGACAG+AGG | + | Chr1:83923473-83923492 | MsG0180004881.01.T01:CDS | 40.0% | |
| CACAACAAAATACCTTGCAG+GGG | + | Chr1:83923647-83923666 | MsG0180004881.01.T01:CDS | 40.0% | |
| CTTTCAATCACTGACCTGTT+TGG | - | Chr1:83923576-83923595 | None:intergenic | 40.0% | |
| GACTATAAAAATCCCCTGCA+AGG | - | Chr1:83923662-83923681 | None:intergenic | 40.0% | |
| GCACAACAAAATACCTTGCA+GGG | + | Chr1:83923646-83923665 | MsG0180004881.01.T01:CDS | 40.0% | |
| GCATGATTAGTGGTCTAGAT+TGG | - | Chr1:83923270-83923289 | None:intergenic | 40.0% | |
| GGTGGGAAGATATATCTTCT+AGG | + | Chr1:83923772-83923791 | MsG0180004881.01.T01:CDS | 40.0% | |
| GTCTGCTTTCCAAAAAGTTG+TGG | + | Chr1:83923794-83923813 | MsG0180004881.01.T01:CDS | 40.0% | |
| TAGATAATTGGTGTGACTGC+AGG | - | Chr1:83923519-83923538 | None:intergenic | 40.0% | |
| TCAGAAGCAAACACATTGAC+TGG | - | Chr1:83922875-83922894 | None:intergenic | 40.0% | |
| TGACATGCATGCATGATTAG+TGG | - | Chr1:83923280-83923299 | None:intergenic | 40.0% | |
| ! | AACGGATTCATGTTAAGGCT+TGG | + | Chr1:83923751-83923770 | MsG0180004881.01.T01:CDS | 40.0% |
| ! | GATTCATGTTAAGGCTTGGT+GGG | + | Chr1:83923755-83923774 | MsG0180004881.01.T01:CDS | 40.0% |
| ! | TCATACCTCCCACAACTTTT+TGG | - | Chr1:83923806-83923825 | None:intergenic | 40.0% |
| !! | TTTGGTTCTTGGCCTTGAAA+TGG | - | Chr1:83923558-83923577 | None:intergenic | 40.0% |
| GATGATGATCTCACCCTCTT+TGG | + | Chr1:83923028-83923047 | MsG0180004881.01.T01:CDS | 45.0% | |
| GCTTTCCAAAAAGTTGTGGG+AGG | + | Chr1:83923798-83923817 | MsG0180004881.01.T01:CDS | 45.0% | |
| GGATTCATGTTAAGGCTTGG+TGG | + | Chr1:83923754-83923773 | MsG0180004881.01.T01:CDS | 45.0% | |
| GGCACTCAAGATTTATGGTC+TGG | + | Chr1:83922781-83922800 | MsG0180004881.01.T01:CDS | 45.0% | |
| TAGACATATCATGGCACGAG+TGG | - | Chr1:83922822-83922841 | None:intergenic | 45.0% | |
| TCTTTGTTCATGCAGCCCTT+TGG | + | Chr1:83922986-83923005 | MsG0180004881.01.T01:intron | 45.0% | |
| TTCAAGGCCAAGAACCAAAC+AGG | + | Chr1:83923559-83923578 | MsG0180004881.01.T01:CDS | 45.0% | |
| !! | TCACTGACCTGTTTGGTTCT+TGG | - | Chr1:83923569-83923588 | None:intergenic | 45.0% |
| ACGAGTGGTGTTTGTGGACA+TGG | - | Chr1:83922807-83922826 | None:intergenic | 50.0% | |
| ! | GTTGTGGGAGGTATGACCTT+TGG | + | Chr1:83923810-83923829 | MsG0180004881.01.T01:CDS | 50.0% |
| CATGGCACGAGTGGTGTTTG+TGG | - | Chr1:83922813-83922832 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 83922779 | 83923851 | 83922779 | ID=MsG0180004881.01;Name=MsG0180004881.01 |
| Chr1 | mRNA | 83922779 | 83923851 | 83922779 | ID=MsG0180004881.01.T01;Parent=MsG0180004881.01;Name=MsG0180004881.01.T01;_AED=0.14;_eAED=0.14;_QI=0|0|0|1|1|1|3|0|220 |
| Chr1 | exon | 83922779 | 83922925 | 83922779 | ID=MsG0180004881.01.T01:exon:9070;Parent=MsG0180004881.01.T01 |
| Chr1 | exon | 83923001 | 83923049 | 83923001 | ID=MsG0180004881.01.T01:exon:9071;Parent=MsG0180004881.01.T01 |
| Chr1 | exon | 83923385 | 83923851 | 83923385 | ID=MsG0180004881.01.T01:exon:9072;Parent=MsG0180004881.01.T01 |
| Chr1 | CDS | 83922779 | 83922925 | 83922779 | ID=MsG0180004881.01.T01:cds;Parent=MsG0180004881.01.T01 |
| Chr1 | CDS | 83923001 | 83923049 | 83923001 | ID=MsG0180004881.01.T01:cds;Parent=MsG0180004881.01.T01 |
| Chr1 | CDS | 83923385 | 83923851 | 83923385 | ID=MsG0180004881.01.T01:cds;Parent=MsG0180004881.01.T01 |
| Gene Sequence |
| Protein sequence |
