Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013541.01.T01 | XP_013459651.1 | 97.674 | 215 | 5 | 0 | 1 | 215 | 1 | 215 | 6.62E-152 | 430 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013541.01.T01 | O80852 | 60.465 | 215 | 85 | 0 | 1 | 215 | 1 | 215 | 5.20E-98 | 286 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013541.01.T01 | A0A072UVM3 | 97.674 | 215 | 5 | 0 | 1 | 215 | 1 | 215 | 3.16e-152 | 430 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048197.01 | MsG0380013541.01 | 0.801025 | 1.093975e-48 | 5.170625e-46 |
| MsG0080048843.01 | MsG0380013541.01 | 0.824903 | 6.272735e-54 | 5.631445e-51 |
| MsG0180000152.01 | MsG0380013541.01 | 0.826783 | 2.244791e-54 | 2.125959e-51 |
| MsG0180000284.01 | MsG0380013541.01 | 0.826459 | 2.681966e-54 | 2.516684e-51 |
| MsG0180000546.01 | MsG0380013541.01 | 0.834622 | 2.694628e-56 | 3.215363e-53 |
| MsG0180000550.01 | MsG0380013541.01 | 0.832527 | 8.982249e-56 | 1.006627e-52 |
| MsG0180000669.01 | MsG0380013541.01 | 0.841019 | 6.124867e-58 | 8.882300e-55 |
| MsG0180000673.01 | MsG0380013541.01 | 0.819860 | 9.302608e-53 | 7.243682e-50 |
| MsG0180000679.01 | MsG0380013541.01 | 0.844241 | 8.541557e-59 | 1.370430e-55 |
| MsG0180001043.01 | MsG0380013541.01 | 0.833193 | 6.138916e-56 | 7.018299e-53 |
| MsG0180001213.01 | MsG0380013541.01 | 0.832888 | 7.308082e-56 | 8.278901e-53 |
| MsG0180001522.01 | MsG0380013541.01 | 0.822038 | 2.933892e-53 | 2.427630e-50 |
| MsG0180001795.01 | MsG0380013541.01 | 0.832589 | 8.673921e-56 | 9.738615e-53 |
| MsG0180002482.01 | MsG0380013541.01 | 0.832481 | 9.222982e-56 | 1.032208e-52 |
| MsG0180002940.01 | MsG0380013541.01 | -0.812220 | 4.730580e-51 | 2.990323e-48 |
| MsG0180003088.01 | MsG0380013541.01 | 0.818221 | 2.194597e-52 | 1.632869e-49 |
| MsG0180003952.01 | MsG0380013541.01 | 0.820472 | 6.737028e-53 | 5.335714e-50 |
| MsG0180005052.01 | MsG0380013541.01 | 0.808907 | 2.458452e-50 | 1.423035e-47 |
| MsG0180005125.01 | MsG0380013541.01 | 0.805569 | 1.253159e-49 | 6.651992e-47 |
| MsG0180005350.01 | MsG0380013541.01 | 0.829179 | 5.949877e-55 | 6.043824e-52 |
| MsG0180005686.01 | MsG0380013541.01 | 0.805761 | 1.141972e-49 | 6.092400e-47 |
| MsG0180005851.01 | MsG0380013541.01 | 0.816453 | 5.487279e-52 | 3.889544e-49 |
| MsG0180005872.01 | MsG0380013541.01 | 0.819786 | 9.674914e-53 | 7.518017e-50 |
| MsG0180006016.01 | MsG0380013541.01 | 0.818947 | 1.502506e-52 | 1.140730e-49 |
| MsG0180006220.01 | MsG0380013541.01 | 0.850811 | 1.333756e-60 | 2.644930e-57 |
| MsG0280006356.01 | MsG0380013541.01 | 0.849670 | 2.785990e-60 | 5.321714e-57 |
| MsG0280006411.01 | MsG0380013541.01 | 0.808717 | 2.699458e-50 | 1.554689e-47 |
| MsG0280010707.01 | MsG0380013541.01 | 0.803222 | 3.863389e-49 | 1.930699e-46 |
| MsG0280011070.01 | MsG0380013541.01 | 0.809665 | 1.690991e-50 | 9.988920e-48 |
| MsG0280011446.01 | MsG0380013541.01 | 0.823792 | 1.144597e-53 | 9.955329e-51 |
| MsG0380012310.01 | MsG0380013541.01 | 0.842059 | 3.258009e-58 | 4.880997e-55 |
| MsG0380012661.01 | MsG0380013541.01 | -0.817627 | 2.989772e-52 | 2.188567e-49 |
| MsG0380012930.01 | MsG0380013541.01 | 0.814405 | 1.566967e-51 | 1.050527e-48 |
| MsG0380013047.01 | MsG0380013541.01 | 0.807986 | 3.865923e-50 | 2.184269e-47 |
| MsG0380013541.01 | MsG0380014177.01 | 0.835871 | 1.303444e-56 | 1.614769e-53 |
| MsG0380013541.01 | MsG0380014770.01 | 0.814780 | 1.293840e-51 | 8.761884e-49 |
| MsG0380013541.01 | MsG0380015027.01 | 0.804317 | 2.289373e-49 | 1.176712e-46 |
| MsG0380013541.01 | MsG0380015400.01 | 0.807564 | 4.753242e-50 | 2.656058e-47 |
| MsG0380013541.01 | MsG0380015779.01 | 0.812355 | 4.420757e-51 | 2.804643e-48 |
| MsG0380013541.01 | MsG0380017226.01 | 0.838417 | 2.911686e-57 | 3.897496e-54 |
| MsG0380013541.01 | MsG0380017286.01 | 0.837214 | 5.932548e-57 | 7.652581e-54 |
| MsG0380013541.01 | MsG0380017403.01 | 0.800924 | 1.147091e-48 | 5.407566e-46 |
| MsG0380013541.01 | MsG0380017680.01 | 0.839193 | 1.834857e-57 | 2.514811e-54 |
| MsG0380013541.01 | MsG0380018001.01 | 0.848422 | 6.192547e-60 | 1.135873e-56 |
| MsG0380013541.01 | MsG0380018009.01 | 0.821981 | 3.024067e-53 | 2.498191e-50 |
| MsG0380013541.01 | MsG0480018187.01 | 0.817048 | 4.035448e-52 | 2.907727e-49 |
| MsG0380013541.01 | MsG0480018473.01 | 0.801711 | 7.914695e-49 | 3.805879e-46 |
| MsG0380013541.01 | MsG0480018906.01 | 0.842632 | 2.297190e-58 | 3.503863e-55 |
| MsG0380013541.01 | MsG0480018970.01 | 0.803857 | 2.852921e-49 | 1.449242e-46 |
| MsG0380013541.01 | MsG0480019373.01 | 0.813112 | 3.018698e-51 | 1.953721e-48 |
| MsG0380013541.01 | MsG0480020065.01 | 0.820215 | 7.715797e-53 | 6.067454e-50 |
| MsG0380013541.01 | MsG0480020090.01 | 0.820502 | 6.630272e-53 | 5.255345e-50 |
| MsG0380013541.01 | MsG0480020372.01 | 0.801875 | 7.325304e-49 | 3.537371e-46 |
| MsG0380013541.01 | MsG0480020445.01 | 0.815339 | 9.725626e-52 | 6.687220e-49 |
| MsG0380013541.01 | MsG0480020843.01 | 0.869028 | 4.208012e-66 | 1.555459e-62 |
| MsG0380013541.01 | MsG0480021164.01 | 0.805416 | 1.348857e-49 | 7.132158e-47 |
| MsG0380013541.01 | MsG0480021731.01 | 0.836242 | 1.049798e-56 | 1.315408e-53 |
| MsG0380013541.01 | MsG0480021994.01 | 0.818610 | 1.791341e-52 | 1.347206e-49 |
| MsG0380013541.01 | MsG0480022035.01 | 0.813245 | 2.821763e-51 | 1.832959e-48 |
| MsG0380013541.01 | MsG0480022052.01 | -0.820128 | 8.077663e-53 | 6.337462e-50 |
| MsG0380013541.01 | MsG0480022222.01 | 0.812343 | 4.446683e-51 | 2.820181e-48 |
| MsG0380013541.01 | MsG0480022274.01 | 0.809020 | 2.325762e-50 | 1.350309e-47 |
| MsG0380013541.01 | MsG0480022707.01 | 0.802964 | 4.370074e-49 | 2.169515e-46 |
| MsG0380013541.01 | MsG0480022768.01 | 0.852792 | 3.658137e-61 | 7.733457e-58 |
| MsG0380013541.01 | MsG0480023465.01 | 0.816812 | 4.559470e-52 | 3.263954e-49 |
| MsG0380013541.01 | MsG0480023517.01 | 0.809440 | 1.890161e-50 | 1.109838e-47 |
| MsG0380013541.01 | MsG0480023707.01 | 0.802846 | 4.621992e-49 | 2.287833e-46 |
| MsG0380013541.01 | MsG0580024472.01 | 0.829209 | 5.851125e-55 | 5.948900e-52 |
| MsG0380013541.01 | MsG0580025134.01 | 0.818214 | 2.203255e-52 | 1.638990e-49 |
| MsG0380013541.01 | MsG0580025453.01 | 0.804917 | 1.716322e-49 | 8.960173e-47 |
| MsG0380013541.01 | MsG0580027034.01 | 0.813149 | 2.961624e-51 | 1.918819e-48 |
| MsG0380013541.01 | MsG0580028185.01 | 0.805586 | 1.242529e-49 | 6.598755e-47 |
| MsG0380013541.01 | MsG0580029256.01 | 0.814127 | 1.805029e-51 | 1.200957e-48 |
| MsG0380013541.01 | MsG0580029897.01 | 0.804270 | 2.341109e-49 | 1.201860e-46 |
| MsG0380013541.01 | MsG0680032430.01 | 0.891432 | 3.993019e-74 | 3.500270e-70 |
| MsG0380013541.01 | MsG0680033339.01 | 0.820398 | 7.006747e-53 | 5.538214e-50 |
| MsG0380013541.01 | MsG0680034190.01 | 0.800507 | 1.395262e-48 | 6.507952e-46 |
| MsG0380013541.01 | MsG0680034219.01 | 0.859395 | 4.259484e-63 | 1.123419e-59 |
| MsG0380013541.01 | MsG0680035704.01 | 0.800348 | 1.503233e-48 | 6.983647e-46 |
| MsG0380013541.01 | MsG0780037082.01 | 0.807134 | 5.862670e-50 | 3.239615e-47 |
| MsG0380013541.01 | MsG0780038495.01 | 0.814418 | 1.556578e-51 | 1.043923e-48 |
| MsG0380013541.01 | MsG0780039841.01 | 0.864188 | 1.455544e-64 | 4.529956e-61 |
| MsG0380013541.01 | MsG0780040442.01 | 0.818772 | 1.646607e-52 | 1.243983e-49 |
| MsG0380013541.01 | MsG0780040861.01 | 0.846084 | 2.711513e-59 | 4.613785e-56 |
| MsG0380013541.01 | MsG0780041294.01 | 0.833926 | 4.028267e-56 | 4.708002e-53 |
| MsG0380013541.01 | MsG0780041345.01 | 0.821691 | 3.528856e-53 | 2.891478e-50 |
| MsG0380013541.01 | MsG0780041399.01 | 0.811510 | 6.754372e-51 | 4.189071e-48 |
| MsG0380013541.01 | MsG0880042294.01 | 0.814268 | 1.679937e-51 | 1.122061e-48 |
| MsG0380013541.01 | MsG0880042314.01 | 0.800501 | 1.399378e-48 | 6.526233e-46 |
| MsG0380013541.01 | MsG0880043002.01 | 0.829846 | 4.096678e-55 | 4.243785e-52 |
| MsG0380013541.01 | MsG0880043003.01 | 0.817659 | 2.939888e-52 | 2.153999e-49 |
| MsG0380013541.01 | MsG0880043082.01 | 0.825278 | 5.114344e-54 | 4.640593e-51 |
| MsG0380013541.01 | MsG0880043163.01 | 0.810007 | 1.427584e-50 | 8.509045e-48 |
| MsG0380013541.01 | MsG0880043303.01 | 0.840914 | 6.525102e-58 | 9.433060e-55 |
| MsG0380013541.01 | MsG0880043465.01 | 0.815376 | 9.541346e-52 | 6.567087e-49 |
| MsG0380013541.01 | MsG0880043835.01 | 0.840948 | 6.391625e-58 | 9.249480e-55 |
| MsG0380013541.01 | MsG0880044062.01 | -0.815079 | 1.110902e-51 | 7.583920e-49 |
| MsG0380013541.01 | MsG0880045133.01 | 0.802610 | 5.169516e-49 | 2.543395e-46 |
| MsG0380013541.01 | MsG0880046058.01 | 0.820567 | 6.408058e-53 | 5.088348e-50 |
| MsG0380013541.01 | MsG0880046209.01 | 0.801652 | 8.139214e-49 | 3.907911e-46 |
| MsG0380013541.01 | MsG0880046285.01 | 0.837922 | 3.904030e-57 | 5.147451e-54 |
| MsG0380013541.01 | MsG0880047038.01 | 0.806750 | 7.069145e-50 | 3.867656e-47 |
| MsG0380013541.01 | MsG0880047116.01 | 0.808988 | 2.362437e-50 | 1.370442e-47 |
| MsG0380013541.01 | MsG0880047143.01 | 0.801935 | 7.120074e-49 | 3.443263e-46 |
| MsG0380013541.01 | MsG0880047191.01 | 0.811668 | 6.239396e-51 | 3.885455e-48 |
| MsG0380013541.01 | MsG0880047448.01 | 0.823185 | 1.587025e-53 | 1.356750e-50 |
| MsG0280006501.01 | MsG0380013541.01 | 0.851387 | 9.176915e-61 | 1.854488e-57 |
| MsG0280006708.01 | MsG0380013541.01 | 0.817465 | 3.251272e-52 | 2.369628e-49 |
| MsG0280007714.01 | MsG0380013541.01 | 0.804540 | 2.056806e-49 | 1.063264e-46 |
| MsG0280008286.01 | MsG0380013541.01 | 0.803908 | 2.785321e-49 | 1.416756e-46 |
| MsG0280008971.01 | MsG0380013541.01 | 0.836289 | 1.020800e-56 | 1.280889e-53 |
| MsG0280009109.01 | MsG0380013541.01 | 0.821682 | 3.545458e-53 | 2.904319e-50 |
| MsG0280009140.01 | MsG0380013541.01 | 0.804191 | 2.431871e-49 | 1.245900e-46 |
| MsG0280010013.01 | MsG0380013541.01 | 0.805669 | 1.193929e-49 | 6.354232e-47 |
| MsG0280010204.01 | MsG0380013541.01 | 0.814931 | 1.198139e-51 | 8.146645e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0380013541.01 | MsG0480023632.01 | PPI |
| MsG0380013541.01 | MsG0180004881.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013541.01.T01 | MTR_3g450790 | 97.674 | 215 | 5 | 0 | 1 | 215 | 1 | 215 | 8.01e-156 | 430 |
| MsG0380013541.01.T01 | MTR_3g450930 | 78.140 | 215 | 47 | 0 | 1 | 215 | 1 | 215 | 3.08e-127 | 358 |
| MsG0380013541.01.T01 | MTR_5g090920 | 72.222 | 216 | 59 | 1 | 1 | 215 | 1 | 216 | 3.43e-112 | 320 |
| MsG0380013541.01.T01 | MTR_5g090910 | 69.444 | 216 | 65 | 1 | 1 | 215 | 1 | 216 | 5.65e-110 | 314 |
| MsG0380013541.01.T01 | MTR_3g064700 | 56.808 | 213 | 91 | 1 | 1 | 212 | 1 | 213 | 2.00e-86 | 254 |
| MsG0380013541.01.T01 | MTR_5g090910 | 69.737 | 152 | 45 | 1 | 65 | 215 | 8 | 159 | 8.25e-74 | 221 |
| MsG0380013541.01.T01 | MTR_1g088850 | 49.524 | 210 | 103 | 3 | 1 | 208 | 1 | 209 | 3.89e-71 | 216 |
| MsG0380013541.01.T01 | MTR_1g026140 | 48.165 | 218 | 107 | 3 | 3 | 214 | 5 | 222 | 5.35e-67 | 206 |
| MsG0380013541.01.T01 | MTR_1g088840 | 41.905 | 210 | 120 | 2 | 2 | 210 | 3 | 211 | 3.61e-55 | 175 |
| MsG0380013541.01.T01 | MTR_1g088825 | 41.905 | 210 | 120 | 2 | 2 | 210 | 3 | 211 | 3.61e-55 | 175 |
| MsG0380013541.01.T01 | MTR_1g088845 | 42.381 | 210 | 119 | 2 | 2 | 210 | 3 | 211 | 1.35e-52 | 169 |
| MsG0380013541.01.T01 | MTR_1g088840 | 42.683 | 164 | 93 | 1 | 47 | 210 | 2 | 164 | 3.12e-42 | 140 |
| MsG0380013541.01.T01 | MTR_1g088840 | 44.248 | 113 | 62 | 1 | 98 | 210 | 4 | 115 | 9.17e-26 | 97.1 |
| MsG0380013541.01.T01 | MTR_8g098420 | 30.409 | 171 | 115 | 3 | 1 | 167 | 1 | 171 | 4.37e-17 | 76.3 |
| MsG0380013541.01.T01 | MTR_8g098420 | 29.381 | 194 | 126 | 4 | 1 | 190 | 1 | 187 | 1.01e-16 | 76.6 |
| MsG0380013541.01.T01 | MTR_1g492670 | 46.970 | 66 | 34 | 1 | 145 | 210 | 2 | 66 | 8.07e-14 | 64.3 |
| MsG0380013541.01.T01 | MTR_4g134370 | 37.234 | 94 | 58 | 1 | 15 | 108 | 29 | 121 | 1.66e-12 | 64.7 |
| MsG0380013541.01.T01 | MTR_2g005570 | 26.111 | 180 | 106 | 5 | 39 | 208 | 42 | 204 | 2.37e-12 | 65.5 |
| MsG0380013541.01.T01 | MTR_2g005570 | 25.556 | 180 | 107 | 5 | 39 | 208 | 42 | 204 | 8.51e-12 | 63.9 |
| MsG0380013541.01.T01 | MTR_4g134380 | 29.560 | 159 | 95 | 5 | 15 | 166 | 29 | 177 | 1.77e-11 | 61.6 |
| MsG0380013541.01.T01 | MTR_8g098430 | 27.326 | 172 | 115 | 5 | 3 | 167 | 5 | 173 | 2.33e-11 | 61.6 |
| MsG0380013541.01.T01 | MTR_4g134380 | 32.979 | 94 | 62 | 1 | 15 | 108 | 29 | 121 | 5.48e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380013541.01.T01 | AT2G30860 | 60.465 | 215 | 85 | 0 | 1 | 215 | 1 | 215 | 5.30e-99 | 286 |
| MsG0380013541.01.T01 | AT2G30870 | 59.070 | 215 | 88 | 0 | 1 | 215 | 1 | 215 | 3.71e-97 | 282 |
| MsG0380013541.01.T01 | AT3G03190 | 51.869 | 214 | 102 | 1 | 1 | 213 | 1 | 214 | 4.34e-77 | 231 |
| MsG0380013541.01.T01 | AT5G17220 | 48.341 | 211 | 108 | 1 | 1 | 210 | 1 | 211 | 9.67e-69 | 209 |
| MsG0380013541.01.T01 | AT3G62760 | 47.847 | 209 | 106 | 3 | 1 | 207 | 1 | 208 | 8.72e-68 | 207 |
| MsG0380013541.01.T01 | AT2G30860 | 59.740 | 154 | 62 | 0 | 1 | 154 | 1 | 154 | 1.06e-65 | 200 |
| MsG0380013541.01.T01 | AT1G02930 | 45.411 | 207 | 110 | 3 | 3 | 208 | 4 | 208 | 5.96e-56 | 177 |
| MsG0380013541.01.T01 | AT1G02930 | 45.411 | 207 | 110 | 3 | 3 | 208 | 4 | 208 | 5.96e-56 | 177 |
| MsG0380013541.01.T01 | AT1G02920 | 45.894 | 207 | 110 | 2 | 3 | 208 | 4 | 209 | 1.77e-54 | 173 |
| MsG0380013541.01.T01 | AT2G47730 | 42.857 | 210 | 117 | 3 | 5 | 212 | 54 | 262 | 6.29e-54 | 174 |
| MsG0380013541.01.T01 | AT2G47730 | 42.857 | 210 | 117 | 3 | 5 | 212 | 54 | 262 | 6.29e-54 | 174 |
| MsG0380013541.01.T01 | AT2G02930 | 44.286 | 210 | 112 | 3 | 3 | 208 | 4 | 212 | 7.22e-53 | 169 |
| MsG0380013541.01.T01 | AT4G02520 | 43.062 | 209 | 114 | 3 | 3 | 207 | 4 | 211 | 9.90e-53 | 169 |
| MsG0380013541.01.T01 | AT1G49860 | 41.872 | 203 | 115 | 2 | 16 | 215 | 19 | 221 | 7.66e-51 | 165 |
| MsG0380013541.01.T01 | AT1G02950 | 40.686 | 204 | 118 | 3 | 4 | 205 | 26 | 228 | 2.73e-47 | 156 |
| MsG0380013541.01.T01 | AT1G02950 | 40.686 | 204 | 118 | 3 | 4 | 205 | 26 | 228 | 2.73e-47 | 156 |
| MsG0380013541.01.T01 | AT1G02950 | 40.686 | 204 | 118 | 3 | 4 | 205 | 38 | 240 | 2.91e-47 | 156 |
| MsG0380013541.01.T01 | AT1G02950 | 40.686 | 204 | 118 | 3 | 4 | 205 | 28 | 230 | 2.95e-47 | 156 |
| MsG0380013541.01.T01 | AT1G02940 | 38.278 | 209 | 126 | 3 | 4 | 210 | 40 | 247 | 6.77e-46 | 153 |
| MsG0380013541.01.T01 | AT1G02940 | 38.278 | 209 | 126 | 3 | 4 | 210 | 40 | 247 | 6.77e-46 | 153 |
| MsG0380013541.01.T01 | AT1G02940 | 38.278 | 209 | 126 | 3 | 4 | 210 | 53 | 260 | 8.80e-46 | 153 |
| MsG0380013541.01.T01 | AT1G02940 | 38.278 | 209 | 126 | 3 | 4 | 210 | 65 | 272 | 8.93e-46 | 153 |
| MsG0380013541.01.T01 | AT1G02950 | 37.241 | 145 | 89 | 2 | 62 | 205 | 59 | 202 | 1.10e-26 | 102 |
| MsG0380013541.01.T01 | AT5G41240 | 28.000 | 200 | 138 | 3 | 1 | 194 | 1 | 200 | 6.48e-14 | 70.5 |
| MsG0380013541.01.T01 | AT5G41210 | 26.108 | 203 | 144 | 4 | 1 | 197 | 2 | 204 | 7.12e-13 | 65.9 |
| MsG0380013541.01.T01 | AT1G09640 | 26.816 | 179 | 121 | 4 | 39 | 214 | 40 | 211 | 1.01e-12 | 65.9 |
| MsG0380013541.01.T01 | AT1G09640 | 26.901 | 171 | 117 | 3 | 39 | 208 | 40 | 203 | 1.34e-12 | 66.2 |
| MsG0380013541.01.T01 | AT5G41220 | 27.000 | 200 | 140 | 3 | 1 | 194 | 1 | 200 | 6.66e-12 | 64.3 |
| MsG0380013541.01.T01 | AT1G57720 | 27.168 | 173 | 114 | 4 | 39 | 208 | 40 | 203 | 7.75e-12 | 63.9 |
| MsG0380013541.01.T01 | AT1G57720 | 27.168 | 173 | 114 | 4 | 39 | 208 | 40 | 203 | 7.75e-12 | 63.9 |
Find 70 sgRNAs with CRISPR-Local
Find 131 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTCTCTTCAATCACTTTC+TGG | 0.116870 | 3:+40253745 | None:intergenic |
| TGTTCTGTTTGCACCGTTAA+AGG | 0.197508 | 3:-40253781 | MsG0380013541.01.T01:CDS |
| TCAAACTGGGAGAGGAAATT+TGG | 0.210954 | 3:-40253598 | MsG0380013541.01.T01:CDS |
| CTCAAACTGAAACTCTTATT+AGG | 0.214109 | 3:+40253448 | None:intergenic |
| TCTTGCATTTGGTCACTATT+TGG | 0.246792 | 3:-40253625 | MsG0380013541.01.T01:CDS |
| CAGCCTATGGTTCTCCAAAA+AGG | 0.287014 | 3:-40255022 | MsG0380013541.01.T01:CDS |
| GGTGTTTGGAAGAGCTTATT+TGG | 0.290882 | 3:-40253250 | MsG0380013541.01.T01:three_prime_UTR |
| TCAAACTGAAACTCTTATTA+GGG | 0.291179 | 3:+40253449 | None:intergenic |
| CAGTAATAAAATTTGATGTT+TGG | 0.306399 | 3:-40253299 | MsG0380013541.01.T01:three_prime_UTR |
| CACTATTTGGTGAATCAAAC+TGG | 0.321868 | 3:-40253612 | MsG0380013541.01.T01:CDS |
| GATCTTAGCCATCTTGCATT+TGG | 0.333958 | 3:-40253636 | MsG0380013541.01.T01:CDS |
| GCAAATTATAATGAGGTGTT+TGG | 0.345343 | 3:-40253264 | MsG0380013541.01.T01:three_prime_UTR |
| GACAGAAACATACATATGTT+TGG | 0.345557 | 3:+40253333 | None:intergenic |
| AACATGGTTGTGAAAGTTTA+CGG | 0.352941 | 3:-40255047 | MsG0380013541.01.T01:CDS |
| TGTTCTAGACAATATGTTAT+AGG | 0.355470 | 3:-40253361 | MsG0380013541.01.T01:three_prime_UTR |
| GATGGTGATTATACCCTCTA+TGG | 0.366109 | 3:-40254777 | MsG0380013541.01.T01:intron |
| AACCTGCAGTTTGAGAAAAT+CGG | 0.405623 | 3:+40254920 | None:intergenic |
| AACCAAGGAACCGATTTGTT+AGG | 0.406691 | 3:-40253894 | MsG0380013541.01.T01:CDS |
| TCACCGGTTTCACCCTTTAA+CGG | 0.407596 | 3:+40253768 | None:intergenic |
| TACTGTCTTTCCTAACAAAT+CGG | 0.410470 | 3:+40253884 | None:intergenic |
| TTCCTAACAAATCGGTTCCT+TGG | 0.418961 | 3:+40253892 | None:intergenic |
| CTAATAAGAGTTTCAGTTTG+AGG | 0.421851 | 3:-40253447 | MsG0380013541.01.T01:three_prime_UTR |
| GTTCTGTTTGCACCGTTAAA+GGG | 0.425408 | 3:-40253780 | MsG0380013541.01.T01:CDS |
| TTCAATCACTTTCTGGTCAC+CGG | 0.431772 | 3:+40253752 | None:intergenic |
| ACCTGCAGTTTGAGAAAATC+GGG | 0.447227 | 3:+40254921 | None:intergenic |
| AGGAAAGACAGTAGAAGAAA+GGG | 0.454362 | 3:-40253874 | MsG0380013541.01.T01:CDS |
| ATGACCAAGCTGTAGATTGC+TGG | 0.457280 | 3:+40253807 | None:intergenic |
| TGTTGATATTGATCTCTTCA+AGG | 0.461501 | 3:-40254958 | MsG0380013541.01.T01:CDS |
| TAATCACCATCTTGAATAAG+AGG | 0.461529 | 3:+40254789 | None:intergenic |
| GCACCGTTAAAGGGTGAAAC+CGG | 0.464712 | 3:-40253771 | MsG0380013541.01.T01:CDS |
| TAGGAAAGACAGTAGAAGAA+AGG | 0.466401 | 3:-40253875 | MsG0380013541.01.T01:CDS |
| GAAATCACCAGCCAAGTACT+TGG | 0.494773 | 3:+40253671 | None:intergenic |
| TTAAATTGCAAATTATAATG+AGG | 0.495003 | 3:-40253271 | MsG0380013541.01.T01:three_prime_UTR |
| ATATTAGTAGCAGGCCATCT+TGG | 0.502723 | 3:-40253539 | MsG0380013541.01.T01:CDS |
| TATATAAATACCCTGTGTAA+TGG | 0.503081 | 3:-40253500 | MsG0380013541.01.T01:exon |
| AAAGTTTACGGACCAGCCTA+TGG | 0.503832 | 3:-40255035 | MsG0380013541.01.T01:CDS |
| GAGGAAATTTGGTTAGAGAG+AGG | 0.505432 | 3:-40253587 | MsG0380013541.01.T01:CDS |
| TCAAGAACCTTCTTCCAAGA+TGG | 0.510216 | 3:+40253525 | None:intergenic |
| GCTCTCAAAGACCAAGTACT+TGG | 0.516432 | 3:-40253682 | MsG0380013541.01.T01:CDS |
| GAGGTTCCTCTTATTCAAGA+TGG | 0.522461 | 3:-40254795 | MsG0380013541.01.T01:CDS |
| TAGCAGGCCATCTTGGAAGA+AGG | 0.522731 | 3:-40253532 | MsG0380013541.01.T01:CDS |
| ATAAAATGTTTGCTTTCTAG+TGG | 0.524283 | 3:-40253386 | MsG0380013541.01.T01:three_prime_UTR |
| TCAAAGACCAAGTACTTGGC+TGG | 0.541866 | 3:-40253678 | MsG0380013541.01.T01:CDS |
| GTTGATATTGATCTCTTCAA+GGG | 0.544872 | 3:-40254957 | MsG0380013541.01.T01:CDS |
| TAAGAGTTTCAGTTTGAGGA+GGG | 0.552873 | 3:-40253443 | MsG0380013541.01.T01:three_prime_UTR |
| ATAAGAGGAACCTCTCCAAA+AGG | 0.553491 | 3:+40254804 | None:intergenic |
| TTGGTGAATCAAACTGGGAG+AGG | 0.560271 | 3:-40253606 | MsG0380013541.01.T01:CDS |
| GATGAGGTGGCTAACCATAG+AGG | 0.563044 | 3:+40254763 | None:intergenic |
| AAGAGTTTCAGTTTGAGGAG+GGG | 0.565321 | 3:-40253442 | MsG0380013541.01.T01:three_prime_UTR |
| CACAAACAAAACCATTACAC+AGG | 0.565632 | 3:+40253489 | None:intergenic |
| TGTTGGATATTTACGAGGAG+AGG | 0.570899 | 3:-40253704 | MsG0380013541.01.T01:CDS |
| GGTGGGATGATATTAGTAGC+AGG | 0.571858 | 3:-40253548 | MsG0380013541.01.T01:CDS |
| AGTAGAAGAAAGGGGTCTTG+TGG | 0.572723 | 3:-40253865 | MsG0380013541.01.T01:CDS |
| TGAAAAGCTCAAGAAAGTGT+TGG | 0.575500 | 3:-40253721 | MsG0380013541.01.T01:CDS |
| TCACCCAGCAATCTACAGCT+TGG | 0.583361 | 3:-40253811 | MsG0380013541.01.T01:CDS |
| AATAGTGACCAAATGCAAGA+TGG | 0.590599 | 3:+40253628 | None:intergenic |
| ATAAGAGTTTCAGTTTGAGG+AGG | 0.597643 | 3:-40253444 | MsG0380013541.01.T01:three_prime_UTR |
| ATGAGGTGGCTAACCATAGA+GGG | 0.609900 | 3:+40254764 | None:intergenic |
| GAAACATGTGAGTGCATGGT+GGG | 0.618318 | 3:-40253565 | MsG0380013541.01.T01:CDS |
| AAAGGGGTCTTGTGGAACAA+TGG | 0.621131 | 3:-40253857 | MsG0380013541.01.T01:CDS |
| TGTGGAACAATGGCTTGAAG+TGG | 0.622912 | 3:-40253847 | MsG0380013541.01.T01:CDS |
| TGACCAAGCTGTAGATTGCT+GGG | 0.623969 | 3:+40253808 | None:intergenic |
| AGAGGAAACATGTGAGTGCA+TGG | 0.644423 | 3:-40253569 | MsG0380013541.01.T01:CDS |
| GGAAAGACAGTAGAAGAAAG+GGG | 0.652059 | 3:-40253873 | MsG0380013541.01.T01:CDS |
| ACTATTTGGTGAATCAAACT+GGG | 0.660675 | 3:-40253611 | MsG0380013541.01.T01:CDS |
| CAAACTGAAACTCTTATTAG+GGG | 0.667095 | 3:+40253450 | None:intergenic |
| GCAGAAAAGTACAAGAACCA+AGG | 0.682353 | 3:-40253909 | MsG0380013541.01.T01:CDS |
| ACAAACAAAACCATTACACA+GGG | 0.686281 | 3:+40253490 | None:intergenic |
| GAAAGTGTTGGATATTTACG+AGG | 0.697226 | 3:-40253709 | MsG0380013541.01.T01:CDS |
| GGAAACATGTGAGTGCATGG+TGG | 0.712862 | 3:-40253566 | MsG0380013541.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAAAATAATCAGTAATTT+TGG | + | Chr3:40254140-40254159 | None:intergenic | 10.0% |
| !! | TTAAATTGCAAATTATAATG+AGG | - | Chr3:40255005-40255024 | MsG0380013541.01.T01:CDS | 15.0% |
| !!! | ATTAAGTTGAATAAAATTGA+AGG | + | Chr3:40253401-40253420 | None:intergenic | 15.0% |
| !!! | GTTTATAAACATTTTTGAAA+AGG | + | Chr3:40254074-40254093 | None:intergenic | 15.0% |
| !!! | TTGGATTATATTTTAAACTT+TGG | - | Chr3:40253594-40253613 | MsG0380013541.01.T01:CDS | 15.0% |
| !! | AAAATTGCAGAAAATAGTAA+AGG | + | Chr3:40253539-40253558 | None:intergenic | 20.0% |
| !! | AAACTTTCTCAATACATTAA+GGG | - | Chr3:40254090-40254109 | MsG0380013541.01.T01:intron | 20.0% |
| !! | AAATTGCAGAAAATAGTAAA+GGG | + | Chr3:40253538-40253557 | None:intergenic | 20.0% |
| !! | CAGTAATAAAATTTGATGTT+TGG | - | Chr3:40254977-40254996 | MsG0380013541.01.T01:CDS | 20.0% |
| !! | GAATAATCTATTCATACTAA+TGG | - | Chr3:40254221-40254240 | MsG0380013541.01.T01:intron | 20.0% |
| !! | TAAACTTTCTCAATACATTA+AGG | - | Chr3:40254089-40254108 | MsG0380013541.01.T01:intron | 20.0% |
| !!! | AAAATAAACAGCAATTTGTT+CGG | - | Chr3:40253894-40253913 | MsG0380013541.01.T01:CDS | 20.0% |
| !!! | ATATTTTAAACTTTGGATCA+GGG | - | Chr3:40253601-40253620 | MsG0380013541.01.T01:CDS | 20.0% |
| !!! | CAAATTTTATTACTGAAATC+AGG | + | Chr3:40254972-40254991 | None:intergenic | 20.0% |
| !!! | TATATTTTAAACTTTGGATC+AGG | - | Chr3:40253600-40253619 | MsG0380013541.01.T01:CDS | 20.0% |
| ! | AGATAATGATTGTTTAAGCT+AGG | + | Chr3:40253777-40253796 | None:intergenic | 25.0% |
| ! | AGCTTAAACAATCATTATCT+AGG | - | Chr3:40253777-40253796 | MsG0380013541.01.T01:CDS | 25.0% |
| ! | ATAAAATGTTTGCTTTCTAG+TGG | - | Chr3:40254890-40254909 | MsG0380013541.01.T01:intron | 25.0% |
| ! | TATATAAATACCCTGTGTAA+TGG | - | Chr3:40254776-40254795 | MsG0380013541.01.T01:intron | 25.0% |
| ! | TCAAACTGAAACTCTTATTA+GGG | + | Chr3:40254830-40254849 | None:intergenic | 25.0% |
| !! | GGTCTTATGTTAGTAATTTA+TGG | + | Chr3:40254053-40254072 | None:intergenic | 25.0% |
| !! | TGTTCTAGACAATATGTTAT+AGG | - | Chr3:40254915-40254934 | MsG0380013541.01.T01:intron | 25.0% |
| !!! | AAACGAATTTTTCAGAATCT+CGG | - | Chr3:40254326-40254345 | MsG0380013541.01.T01:intron | 25.0% |
| AAAACACATGAATCAGGATA+AGG | + | Chr3:40253685-40253704 | None:intergenic | 30.0% | |
| AAACACATGAATCAGGATAA+GGG | + | Chr3:40253684-40253703 | None:intergenic | 30.0% | |
| AACACATTTCAAGCATAATC+AGG | + | Chr3:40253971-40253990 | None:intergenic | 30.0% | |
| AACATGGTTGTGAAAGTTTA+CGG | - | Chr3:40253229-40253248 | MsG0380013541.01.T01:three_prime_UTR | 30.0% | |
| ACAAACAAAACCATTACACA+GGG | + | Chr3:40254789-40254808 | None:intergenic | 30.0% | |
| ATGTCTACTACTTGTCAATT+TGG | - | Chr3:40254026-40254045 | MsG0380013541.01.T01:intron | 30.0% | |
| ATTAAGGGACTATAGTAACA+CGG | - | Chr3:40254105-40254124 | MsG0380013541.01.T01:intron | 30.0% | |
| CAAACTGAAACTCTTATTAG+GGG | + | Chr3:40254829-40254848 | None:intergenic | 30.0% | |
| CTAATAAGAGTTTCAGTTTG+AGG | - | Chr3:40254829-40254848 | MsG0380013541.01.T01:intron | 30.0% | |
| CTCAAACTGAAACTCTTATT+AGG | + | Chr3:40254831-40254850 | None:intergenic | 30.0% | |
| GACAGAAACATACATATGTT+TGG | + | Chr3:40254946-40254965 | None:intergenic | 30.0% | |
| GCTGAAAATATAACAGACAT+AGG | + | Chr3:40253453-40253472 | None:intergenic | 30.0% | |
| GTCATTTCTATCTGTTAATG+TGG | - | Chr3:40254199-40254218 | MsG0380013541.01.T01:intron | 30.0% | |
| GTTGATATTGATCTCTTCAA+GGG | - | Chr3:40253319-40253338 | MsG0380013541.01.T01:three_prime_UTR | 30.0% | |
| TAATCACCATCTTGAATAAG+AGG | + | Chr3:40253490-40253509 | None:intergenic | 30.0% | |
| TACTGTCTTTCCTAACAAAT+CGG | + | Chr3:40254395-40254414 | None:intergenic | 30.0% | |
| TCTAGGCTTAATTTATCTCT+CGG | - | Chr3:40253794-40253813 | MsG0380013541.01.T01:CDS | 30.0% | |
| TGGTTAATCATCTTCACTTA+AGG | - | Chr3:40253720-40253739 | MsG0380013541.01.T01:CDS | 30.0% | |
| TGTTGATATTGATCTCTTCA+AGG | - | Chr3:40253318-40253337 | MsG0380013541.01.T01:three_prime_UTR | 30.0% | |
| ! | ACAAGTAGTAGACATTTTCA+AGG | + | Chr3:40254021-40254040 | None:intergenic | 30.0% |
| ! | ACTATTTGGTGAATCAAACT+GGG | - | Chr3:40254665-40254684 | MsG0380013541.01.T01:intron | 30.0% |
| ! | CTGTTATATTTTCAGCCTTT+TGG | - | Chr3:40253457-40253476 | MsG0380013541.01.T01:three_prime_UTR | 30.0% |
| ! | GCAAATTATAATGAGGTGTT+TGG | - | Chr3:40255012-40255031 | MsG0380013541.01.T01:CDS | 30.0% |
| ! | TTTTCAGAGACAAAAGATTC+AGG | + | Chr3:40253211-40253230 | None:intergenic | 30.0% |
| !! | AACGAATTTTTCAGAATCTC+GGG | - | Chr3:40254327-40254346 | MsG0380013541.01.T01:intron | 30.0% |
| !! | ATCTTTTGTCTCTGAAAACA+TGG | - | Chr3:40253213-40253232 | MsG0380013541.01.T01:three_prime_UTR | 30.0% |
| !!! | CTGATTCATGTGTTTTTAGA+GGG | - | Chr3:40253689-40253708 | MsG0380013541.01.T01:CDS | 30.0% |
| AAAATAGTAAAGGGATGAGG+TGG | + | Chr3:40253529-40253548 | None:intergenic | 35.0% | |
| AACCTGCAGTTTGAGAAAAT+CGG | + | Chr3:40253359-40253378 | None:intergenic | 35.0% | |
| AATAGTGACCAAATGCAAGA+TGG | + | Chr3:40254651-40254670 | None:intergenic | 35.0% | |
| ACTATAGTAACACGGCTTTA+GGG | - | Chr3:40254113-40254132 | MsG0380013541.01.T01:intron | 35.0% | |
| AGGAAAGACAGTAGAAGAAA+GGG | - | Chr3:40254402-40254421 | MsG0380013541.01.T01:intron | 35.0% | |
| ATAAGAGTTTCAGTTTGAGG+AGG | - | Chr3:40254832-40254851 | MsG0380013541.01.T01:intron | 35.0% | |
| CACAAACAAAACCATTACAC+AGG | + | Chr3:40254790-40254809 | None:intergenic | 35.0% | |
| CAGAAAATAGTAAAGGGATG+AGG | + | Chr3:40253532-40253551 | None:intergenic | 35.0% | |
| TAAGAGTTTCAGTTTGAGGA+GGG | - | Chr3:40254833-40254852 | MsG0380013541.01.T01:intron | 35.0% | |
| TAGGAAAGACAGTAGAAGAA+AGG | - | Chr3:40254401-40254420 | MsG0380013541.01.T01:intron | 35.0% | |
| TCTTGCATTTGGTCACTATT+TGG | - | Chr3:40254651-40254670 | MsG0380013541.01.T01:intron | 35.0% | |
| ! | CACTATTTGGTGAATCAAAC+TGG | - | Chr3:40254664-40254683 | MsG0380013541.01.T01:intron | 35.0% |
| ! | CAGGGTGTTACATTTAATTG+AGG | - | Chr3:40253619-40253638 | MsG0380013541.01.T01:CDS | 35.0% |
| ! | CCTCTAAAAACACATGAATC+AGG | + | Chr3:40253691-40253710 | None:intergenic | 35.0% |
| ! | CTGATTGGTGATTTACTGAT+TGG | - | Chr3:40253575-40253594 | MsG0380013541.01.T01:CDS | 35.0% |
| ! | TGAAAAGCTCAAGAAAGTGT+TGG | - | Chr3:40254555-40254574 | MsG0380013541.01.T01:intron | 35.0% |
| !! | ATATTTTCAGCCTTTTGGAG+AGG | - | Chr3:40253462-40253481 | MsG0380013541.01.T01:three_prime_UTR | 35.0% |
| !! | GAAAGTGTTGGATATTTACG+AGG | - | Chr3:40254567-40254586 | MsG0380013541.01.T01:intron | 35.0% |
| !! | GTTGGTATGTCTTTTTGAGA+AGG | - | Chr3:40253279-40253298 | MsG0380013541.01.T01:three_prime_UTR | 35.0% |
| !! | GTTTTTAGAGGGTAATCAAG+TGG | - | Chr3:40253700-40253719 | MsG0380013541.01.T01:CDS | 35.0% |
| !!! | CCTGATTCATGTGTTTTTAG+AGG | - | Chr3:40253688-40253707 | MsG0380013541.01.T01:CDS | 35.0% |
| AAGAGTTTCAGTTTGAGGAG+GGG | - | Chr3:40254834-40254853 | MsG0380013541.01.T01:intron | 40.0% | |
| ACCTGCAGTTTGAGAAAATC+GGG | + | Chr3:40253358-40253377 | None:intergenic | 40.0% | |
| AGCCTATGGTTCTCCAAAAA+GGG | - | Chr3:40253255-40253274 | MsG0380013541.01.T01:three_prime_UTR | 40.0% | |
| ATAAGAGGAACCTCTCCAAA+AGG | + | Chr3:40253475-40253494 | None:intergenic | 40.0% | |
| ATATTAGTAGCAGGCCATCT+TGG | - | Chr3:40254737-40254756 | MsG0380013541.01.T01:intron | 40.0% | |
| CACTCTCTTCAATCACTTTC+TGG | + | Chr3:40254534-40254553 | None:intergenic | 40.0% | |
| GACTATAGTAACACGGCTTT+AGG | - | Chr3:40254112-40254131 | MsG0380013541.01.T01:intron | 40.0% | |
| GAGGAAATTTGGTTAGAGAG+AGG | - | Chr3:40254689-40254708 | MsG0380013541.01.T01:intron | 40.0% | |
| GAGGTTCCTCTTATTCAAGA+TGG | - | Chr3:40253481-40253500 | MsG0380013541.01.T01:three_prime_UTR | 40.0% | |
| GATCTTAGCCATCTTGCATT+TGG | - | Chr3:40254640-40254659 | MsG0380013541.01.T01:intron | 40.0% | |
| GATGGTGATTATACCCTCTA+TGG | - | Chr3:40253499-40253518 | MsG0380013541.01.T01:exon | 40.0% | |
| GGAAAGACAGTAGAAGAAAG+GGG | - | Chr3:40254403-40254422 | MsG0380013541.01.T01:intron | 40.0% | |
| GGCTGAACTTAGAATTACCA+AGG | - | Chr3:40253815-40253834 | MsG0380013541.01.T01:CDS | 40.0% | |
| GGTGTTTGGAAGAGCTTATT+TGG | - | Chr3:40255026-40255045 | MsG0380013541.01.T01:CDS | 40.0% | |
| GTTCTGTTTGCACCGTTAAA+GGG | - | Chr3:40254496-40254515 | MsG0380013541.01.T01:intron | 40.0% | |
| TCAAACTGGGAGAGGAAATT+TGG | - | Chr3:40254678-40254697 | MsG0380013541.01.T01:intron | 40.0% | |
| TCAAGAACCTTCTTCCAAGA+TGG | + | Chr3:40254754-40254773 | None:intergenic | 40.0% | |
| TGTGCTGTGTAGTTACTGAT+TGG | - | Chr3:40253560-40253579 | MsG0380013541.01.T01:CDS | 40.0% | |
| TGTTCTGTTTGCACCGTTAA+AGG | - | Chr3:40254495-40254514 | MsG0380013541.01.T01:intron | 40.0% | |
| TGTTGGATATTTACGAGGAG+AGG | - | Chr3:40254572-40254591 | MsG0380013541.01.T01:intron | 40.0% | |
| ! | AGACATACCAACACCCTTTT+TGG | + | Chr3:40253271-40253290 | None:intergenic | 40.0% |
| ! | GCAGAAAAGTACAAGAACCA+AGG | - | Chr3:40254367-40254386 | MsG0380013541.01.T01:intron | 40.0% |
| ! | TTCAATCACTTTCTGGTCAC+CGG | + | Chr3:40254527-40254546 | None:intergenic | 40.0% |
| ! | TTCCTAACAAATCGGTTCCT+TGG | + | Chr3:40254387-40254406 | None:intergenic | 40.0% |
| !! | AACCAAGGAACCGATTTGTT+AGG | - | Chr3:40254382-40254401 | MsG0380013541.01.T01:intron | 40.0% |
| !! | GGTATGTCTTTTTGAGAAGG+AGG | - | Chr3:40253282-40253301 | MsG0380013541.01.T01:three_prime_UTR | 40.0% |
| AAAGTTTACGGACCAGCCTA+TGG | - | Chr3:40253241-40253260 | MsG0380013541.01.T01:three_prime_UTR | 45.0% | |
| AGAGGAAACATGTGAGTGCA+TGG | - | Chr3:40254707-40254726 | MsG0380013541.01.T01:intron | 45.0% | |
| AGTAGAAGAAAGGGGTCTTG+TGG | - | Chr3:40254411-40254430 | MsG0380013541.01.T01:intron | 45.0% | |
| ATGACCAAGCTGTAGATTGC+TGG | + | Chr3:40254472-40254491 | None:intergenic | 45.0% | |
| ATGAGGTGGCTAACCATAGA+GGG | + | Chr3:40253515-40253534 | None:intergenic | 45.0% | |
| CAGCCTATGGTTCTCCAAAA+AGG | - | Chr3:40253254-40253273 | MsG0380013541.01.T01:three_prime_UTR | 45.0% | |
| GAAACATGTGAGTGCATGGT+GGG | - | Chr3:40254711-40254730 | MsG0380013541.01.T01:intron | 45.0% | |
| GAAATCACCAGCCAAGTACT+TGG | + | Chr3:40254608-40254627 | None:intergenic | 45.0% | |
| GCTCTCAAAGACCAAGTACT+TGG | - | Chr3:40254594-40254613 | MsG0380013541.01.T01:intron | 45.0% | |
| GGTGGGATGATATTAGTAGC+AGG | - | Chr3:40254728-40254747 | MsG0380013541.01.T01:intron | 45.0% | |
| TCAAAGACCAAGTACTTGGC+TGG | - | Chr3:40254598-40254617 | MsG0380013541.01.T01:intron | 45.0% | |
| TGACCAAGCTGTAGATTGCT+GGG | + | Chr3:40254471-40254490 | None:intergenic | 45.0% | |
| TGTGGAACAATGGCTTGAAG+TGG | - | Chr3:40254429-40254448 | MsG0380013541.01.T01:intron | 45.0% | |
| TTATAACCCTCTCGTTCCCA+TGG | + | Chr3:40253848-40253867 | None:intergenic | 45.0% | |
| TTGGTGAATCAAACTGGGAG+AGG | - | Chr3:40254670-40254689 | MsG0380013541.01.T01:intron | 45.0% | |
| ! | AAAGGGGTCTTGTGGAACAA+TGG | - | Chr3:40254419-40254438 | MsG0380013541.01.T01:intron | 45.0% |
| ! | ACCCGATTTTCTCAAACTGC+AGG | - | Chr3:40253354-40253373 | MsG0380013541.01.T01:three_prime_UTR | 45.0% |
| ! | TGGTTCTCCAAAAAGGGTGT+TGG | - | Chr3:40253261-40253280 | MsG0380013541.01.T01:three_prime_UTR | 45.0% |
| !! | CACCCTTTTTGGAGAACCAT+AGG | + | Chr3:40253260-40253279 | None:intergenic | 45.0% |
| !! | CTTTTTGGAGAACCATAGGC+TGG | + | Chr3:40253256-40253275 | None:intergenic | 45.0% |
| !! | TCACCGGTTTCACCCTTTAA+CGG | + | Chr3:40254511-40254530 | None:intergenic | 45.0% |
| AGGGAAGCAAAGATGCATGC+AGG | + | Chr3:40253665-40253684 | None:intergenic | 50.0% | |
| GATGAGGTGGCTAACCATAG+AGG | + | Chr3:40253516-40253535 | None:intergenic | 50.0% | |
| GCACCGTTAAAGGGTGAAAC+CGG | - | Chr3:40254505-40254524 | MsG0380013541.01.T01:intron | 50.0% | |
| GGAAACATGTGAGTGCATGG+TGG | - | Chr3:40254710-40254729 | MsG0380013541.01.T01:intron | 50.0% | |
| GGGAAGCAAAGATGCATGCA+GGG | + | Chr3:40253664-40253683 | None:intergenic | 50.0% | |
| TAGCAGGCCATCTTGGAAGA+AGG | - | Chr3:40254744-40254763 | MsG0380013541.01.T01:intron | 50.0% | |
| TCACCCAGCAATCTACAGCT+TGG | - | Chr3:40254465-40254484 | MsG0380013541.01.T01:intron | 50.0% | |
| ! | ATTACCAAGGCCGCTTTCCA+TGG | - | Chr3:40253828-40253847 | MsG0380013541.01.T01:CDS | 50.0% |
| ! | TTACCAAGGCCGCTTTCCAT+GGG | - | Chr3:40253829-40253848 | MsG0380013541.01.T01:CDS | 50.0% |
| CCTCTCGTTCCCATGGAAAG+CGG | + | Chr3:40253841-40253860 | None:intergenic | 55.0% | |
| CGCTTTCCATGGGAACGAGA+GGG | - | Chr3:40253839-40253858 | MsG0380013541.01.T01:CDS | 55.0% | |
| CCGCTTTCCATGGGAACGAG+AGG | - | Chr3:40253838-40253857 | MsG0380013541.01.T01:CDS | 60.0% | |
| GTTCCCATGGAAAGCGGCCT+TGG | + | Chr3:40253835-40253854 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 40253177 | 40255121 | 40253177 | ID=MsG0380013541.01;Name=MsG0380013541.01 |
| Chr3 | mRNA | 40253177 | 40255121 | 40253177 | ID=MsG0380013541.01.T01;Parent=MsG0380013541.01;Name=MsG0380013541.01.T01;_AED=0.25;_eAED=0.25;_QI=55|1|1|1|1|1|3|326|215 |
| Chr3 | exon | 40253177 | 40253957 | 40253177 | ID=MsG0380013541.01.T01:exon:521;Parent=MsG0380013541.01.T01 |
| Chr3 | exon | 40254778 | 40254826 | 40254778 | ID=MsG0380013541.01.T01:exon:520;Parent=MsG0380013541.01.T01 |
| Chr3 | exon | 40254923 | 40255121 | 40254923 | ID=MsG0380013541.01.T01:exon:519;Parent=MsG0380013541.01.T01 |
| Chr3 | five_prime_UTR | 40255067 | 40255121 | 40255067 | ID=MsG0380013541.01.T01:five_prime_utr;Parent=MsG0380013541.01.T01 |
| Chr3 | CDS | 40254923 | 40255066 | 40254923 | ID=MsG0380013541.01.T01:cds;Parent=MsG0380013541.01.T01 |
| Chr3 | CDS | 40254778 | 40254826 | 40254778 | ID=MsG0380013541.01.T01:cds;Parent=MsG0380013541.01.T01 |
| Chr3 | CDS | 40253503 | 40253957 | 40253503 | ID=MsG0380013541.01.T01:cds;Parent=MsG0380013541.01.T01 |
| Chr3 | three_prime_UTR | 40253177 | 40253502 | 40253177 | ID=MsG0380013541.01.T01:three_prime_utr;Parent=MsG0380013541.01.T01 |
| Gene Sequence |
| Protein sequence |
