AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005185.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005185.01.T01 MTR_1g094740 95.007 1482 69 3 1 1478 1 1481 0.0 2925
MsG0180005185.01.T01 MTR_3g075210 45.932 381 168 8 292 635 173 552 4.03e-99 351
MsG0180005185.01.T01 MTR_3g075210 52.326 172 58 2 1328 1475 1397 1568 1.39e-49 194
MsG0180005185.01.T01 MTR_3g075210 43.147 197 71 3 3 197 5 162 7.11e-39 159
MsG0180005185.01.T01 MTR_3g075210 36.800 125 75 3 700 821 766 889 1.55e-15 83.2
MsG0180005185.01.T01 MTR_5g029370 49.246 199 97 1 291 485 233 431 4.46e-57 214
MsG0180005185.01.T01 MTR_5g029370 49.246 199 97 1 291 485 233 431 4.46e-57 214
MsG0180005185.01.T01 MTR_1g038370 44.681 188 100 1 291 474 132 319 1.66e-50 189
MsG0180005185.01.T01 MTR_1g038400 45.213 188 99 1 291 474 172 359 1.92e-50 189
MsG0180005185.01.T01 MTR_2g047130 40.426 235 136 3 295 528 261 492 4.39e-43 172
MsG0180005185.01.T01 MTR_2g047130 40.426 235 136 3 295 528 264 495 4.71e-43 172
MsG0180005185.01.T01 MTR_5g010300 37.795 254 143 4 266 516 365 606 2.78e-42 170
MsG0180005185.01.T01 MTR_5g010300 37.795 254 143 4 266 516 365 606 2.82e-42 170
MsG0180005185.01.T01 MTR_5g010300 37.795 254 143 4 266 516 365 606 2.87e-42 171
MsG0180005185.01.T01 MTR_5g010300 37.795 254 143 4 266 516 365 606 3.18e-42 170
MsG0180005185.01.T01 MTR_8g089260 39.381 226 117 3 272 492 229 439 1.19e-40 164
MsG0180005185.01.T01 MTR_1g078070 44.324 185 90 2 295 474 361 537 3.36e-39 159
MsG0180005185.01.T01 MTR_1g078070 44.324 185 90 2 295 474 361 537 5.85e-39 159
MsG0180005185.01.T01 MTR_7g407000 40.972 144 63 3 320 458 28 154 3.16e-30 117
MsG0180005185.01.T01 MTR_7g097070 35.359 181 115 2 295 474 338 517 1.85e-26 118
MsG0180005185.01.T01 MTR_1g090763 68.293 41 13 0 13 53 1 41 4.58e-14 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005185.01.T01 AT5G04240 52.234 940 364 20 1 917 1 878 0.0 920
MsG0180005185.01.T01 AT5G04240 56.650 203 82 3 1278 1474 1137 1339 2.63e-66 248
MsG0180005185.01.T01 AT3G48430 47.154 369 156 8 297 635 206 565 9.34e-96 339
MsG0180005185.01.T01 AT3G48430 63.717 113 41 0 1363 1475 1243 1355 1.54e-46 184
MsG0180005185.01.T01 AT3G48430 46.032 189 79 4 9 194 13 181 1.33e-33 142
MsG0180005185.01.T01 AT3G48430 34.286 140 87 4 700 836 737 874 6.35e-15 81.3
MsG0180005185.01.T01 AT5G46910 47.317 205 103 2 275 474 230 434 6.77e-56 207
MsG0180005185.01.T01 AT5G46910 47.317 205 103 2 275 474 230 434 1.22e-55 209
MsG0180005185.01.T01 AT3G48430 63.717 113 41 0 1363 1475 884 996 4.55e-47 184
MsG0180005185.01.T01 AT3G48430 31.401 207 119 6 451 635 1 206 1.12e-18 93.2
MsG0180005185.01.T01 AT3G48430 34.286 140 87 4 700 836 378 515 4.18e-15 81.6
MsG0180005185.01.T01 AT2G34880 29.668 482 237 13 16 485 61 452 9.25e-45 176
MsG0180005185.01.T01 AT1G63490 41.530 183 98 2 295 474 383 559 3.16e-40 164
MsG0180005185.01.T01 AT1G63490 41.530 183 98 2 295 474 383 559 3.19e-40 164
MsG0180005185.01.T01 AT1G63490 41.530 183 98 2 295 474 130 306 3.69e-40 163
MsG0180005185.01.T01 AT4G20400 42.268 194 99 2 291 479 263 448 5.03e-40 162
MsG0180005185.01.T01 AT4G20400 42.268 194 99 2 291 479 206 391 6.16e-40 161
MsG0180005185.01.T01 AT1G08620 44.565 184 99 1 291 474 375 555 7.45e-39 159
MsG0180005185.01.T01 AT1G08620 44.565 184 99 1 291 474 361 541 7.85e-39 159
MsG0180005185.01.T01 AT1G08620 44.565 184 99 1 291 474 361 541 7.85e-39 159
MsG0180005185.01.T01 AT1G08620 44.565 184 99 1 291 474 361 541 7.85e-39 159
MsG0180005185.01.T01 AT1G30810 43.716 183 94 2 295 474 265 441 1.22e-37 154
MsG0180005185.01.T01 AT1G30810 43.716 183 94 2 295 474 265 441 1.22e-37 154
MsG0180005185.01.T01 AT1G30810 43.716 183 94 2 295 474 265 441 1.22e-37 154
MsG0180005185.01.T01 AT2G38950 31.746 189 110 3 294 475 293 469 1.01e-23 108
MsG0180005185.01.T01 AT1G63490 39.535 86 52 0 389 474 15 100 3.00e-14 79.0

Find 125 sgRNAs with CRISPR-Local

Find 649 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCTTACCTTTGAAGAAAT+TGG 0.073340 1:+88206882 None:intergenic
TTTCCCCAAATCTCCAATTT+AGG 0.104011 1:-88206857 MsG0180005185.01.T01:exon
GAGCAGAAAGCTGGTAAATT+TGG 0.160512 1:-88206606 MsG0180005185.01.T01:exon
AATTCTTGGAAAACGGGTTC+TGG 0.220595 1:-88206462 MsG0180005185.01.T01:exon
GCAAAGTAGAGTGCGAAATT+TGG 0.226627 1:+88206981 None:intergenic
CACTTTGCCAAACTTGCTTA+TGG 0.231366 1:+88206328 None:intergenic
AAAACCCTAAATTGGAGATT+TGG 0.249778 1:+88206852 None:intergenic
AAACCCTAAATTGGAGATTT+GGG 0.250952 1:+88206853 None:intergenic
GGGGCCAGATATTAGTTCTT+TGG 0.261679 1:-88206493 MsG0180005185.01.T01:exon
CGCCGGACCCAAAACGCTTC+TGG 0.278546 1:+88206257 None:intergenic
GTATCAGTTGGTCGAAATTC+AGG 0.292950 1:+88206666 None:intergenic
TTCCCCAAATCTCCAATTTA+GGG 0.299621 1:-88206856 MsG0180005185.01.T01:exon
GAGAGATAGAGCGGTGGTTC+CGG 0.303961 1:+88207073 None:intergenic
CAAGTTATTCCTCGTGCTTC+AGG 0.304366 1:-88205817 MsG0180005185.01.T01:exon
CTAATATCTGGCCCCAATTC+AGG 0.307902 1:+88206501 None:intergenic
GGGCCAGATATTAGTTCTTT+GGG 0.310595 1:-88206492 MsG0180005185.01.T01:exon
CTTTGGGTGCTGGTAATTCT+TGG 0.316778 1:-88206476 MsG0180005185.01.T01:exon
TTAGCATACTCCACATAAAT+AGG 0.324402 1:+88206177 None:intergenic
AAGACTTGGTACTCCGTTCC+TGG 0.339475 1:-88205652 MsG0180005185.01.T01:exon
AGCAGAAAGCTGGTAAATTT+GGG 0.341520 1:-88206605 MsG0180005185.01.T01:exon
GACGTGCCTGGTTCGGCGTT+TGG 0.346548 1:-88206153 MsG0180005185.01.T01:exon
GGTGGTGATGTTGATCAATT+AGG 0.359563 1:-88205583 MsG0180005185.01.T01:intron
CAAAGTAGAGTGCGAAATTT+GGG 0.363046 1:+88206982 None:intergenic
TGAGGCTTCACAGCCTTCTA+AGG 0.364910 1:-88205914 MsG0180005185.01.T01:exon
TGCTTACCTTTGAAGAAATT+GGG 0.368539 1:+88206883 None:intergenic
ACATTGGTATGTTGTTTAGT+TGG 0.376959 1:-88205738 MsG0180005185.01.T01:exon
GGCAACCCTTCAAGCCAATT+GGG 0.379995 1:+88206696 None:intergenic
ATCTTTGAGATATAAGCAAT+TGG 0.382855 1:+88206630 None:intergenic
TGGCAACCCTTCAAGCCAAT+TGG 0.386954 1:+88206695 None:intergenic
CATGTGTCCATAAGCAAGTT+TGG 0.392827 1:-88206335 MsG0180005185.01.T01:exon
TGCTGGTAATTCTTGGAAAA+CGG 0.395089 1:-88206469 MsG0180005185.01.T01:exon
GAAGGCTGTGAAGCCTCATT+TGG 0.397557 1:+88205919 None:intergenic
CCAATTCAGGCCGCTTCAAA+AGG 0.403868 1:+88206514 None:intergenic
ATTCTTGGAAAACGGGTTCT+GGG 0.404488 1:-88206461 MsG0180005185.01.T01:exon
TTCATGCCAGATGATATTCC+TGG 0.407311 1:-88205781 MsG0180005185.01.T01:exon
CAACATACCAATGTATATCA+TGG 0.410757 1:+88205747 None:intergenic
TGCTAATGACGTGCCTGGTT+CGG 0.412477 1:-88206160 MsG0180005185.01.T01:exon
TCTGAAATCATCTCCTTAGA+AGG 0.412686 1:+88205901 None:intergenic
ACAATGCAAGTTGAACAAAA+AGG 0.414389 1:+88206780 None:intergenic
ACATATCACCGCCGAGGATC+CGG 0.421542 1:-88207092 MsG0180005185.01.T01:exon
GTCATCGAAGGCAACGGAAA+AGG 0.422246 1:-88206104 MsG0180005185.01.T01:exon
AAAGCAAAGGCATAATTTCC+AGG 0.424207 1:+88205634 None:intergenic
TGTTGTTTAGTTGGTTTGCC+TGG 0.426727 1:-88205729 MsG0180005185.01.T01:exon
GAAATCCCCAATTGGCTTGA+AGG 0.430083 1:-88206702 MsG0180005185.01.T01:exon
GCTGGTAATTCTTGGAAAAC+GGG 0.437570 1:-88206468 MsG0180005185.01.T01:exon
GGAAGCTTTCAAATAGTCCT+TGG 0.448245 1:-88205846 MsG0180005185.01.T01:exon
GATATTAGTTCTTTGGGTGC+TGG 0.455358 1:-88206486 MsG0180005185.01.T01:exon
TACTACAAGGCAACAGGAAG+TGG 0.460339 1:-88206403 MsG0180005185.01.T01:exon
GTCATCCGCACAGAGGGTTA+TGG 0.461806 1:-88205604 MsG0180005185.01.T01:exon
TTTGAAGGCTTGGGCAATGG+TGG 0.462057 1:+88206567 None:intergenic
GGCGAAGGATGTTTCTCCAT+TGG 0.463321 1:-88206238 MsG0180005185.01.T01:exon
GCACCCAAAGAACTAATATC+TGG 0.464511 1:+88206489 None:intergenic
CGTGTTTACTACAAGGCAAC+AGG 0.465200 1:-88206409 MsG0180005185.01.T01:exon
TGGTTGTAGAGGCCATGTTT+TGG 0.466623 1:-88206218 MsG0180005185.01.T01:exon
AGTATTCCCAATTTCTTCAA+AGG 0.473480 1:-88206889 MsG0180005185.01.T01:exon
AACACGATTCTGCATGACTT+GGG 0.483343 1:+88205983 None:intergenic
GGTTAAGCAAAATAGCGAAA+TGG 0.485694 1:+88206926 None:intergenic
AAGGACTGATTATAAGAGTA+GGG 0.492783 1:-88206085 MsG0180005185.01.T01:exon
TGTTTGTAAAGAAACTGAAA+TGG 0.495743 1:-88206052 MsG0180005185.01.T01:exon
TTCGGCGTTTGGAGAATCAC+AGG 0.504268 1:-88206142 MsG0180005185.01.T01:exon
TCTTTGAGATATAAGCAATT+GGG 0.508742 1:+88206631 None:intergenic
AATGATATGCAAGGCACTGC+TGG 0.508938 1:-88205871 MsG0180005185.01.T01:exon
AATAAATCCAAATTATTAGC+CGG 0.510729 1:-88207204 None:intergenic
AAAGGACTGATTATAAGAGT+AGG 0.515773 1:-88206086 MsG0180005185.01.T01:exon
TCAAAGATTGAGCAGAAAGC+TGG 0.517124 1:-88206615 MsG0180005185.01.T01:exon
AAACACGATTCTGCATGACT+TGG 0.518199 1:+88205982 None:intergenic
TTGGCTTGAAGGGTTGCCAC+TGG 0.520642 1:-88206691 MsG0180005185.01.T01:exon
CGCGGGCCGTGTTTACTACA+AGG 0.522312 1:-88206416 MsG0180005185.01.T01:exon
GTCAACATCTACACCAAATG+AGG 0.522577 1:-88205932 MsG0180005185.01.T01:exon
TCTGGGGATAGTAGTAATGA+TGG 0.523983 1:-88206444 MsG0180005185.01.T01:exon
TTGGTTTGCCTGGCATGTAG+AGG 0.524331 1:-88205719 MsG0180005185.01.T01:exon
ACACAAAATAATGAGTCTAA+AGG 0.525354 1:-88206015 MsG0180005185.01.T01:exon
AAATCCCCAATTGGCTTGAA+GGG 0.528256 1:-88206701 MsG0180005185.01.T01:exon
TTCAGAGAAGCCTATTTATG+TGG 0.528434 1:-88206187 MsG0180005185.01.T01:exon
GTAACGCCAGGAATATCATC+TGG 0.528795 1:+88205775 None:intergenic
CATAAGCAAGTTTGGCAAAG+TGG 0.530953 1:-88206327 MsG0180005185.01.T01:exon
TGTTTCTCCATTGGTTGTAG+AGG 0.537971 1:-88206229 MsG0180005185.01.T01:exon
GAGCGGTGGTTCCGGATCCT+CGG 0.545254 1:+88207081 None:intergenic
TTCATGATCCTCTACATGCC+AGG 0.546401 1:+88205711 None:intergenic
GTAATGCTGAAATCCCCAAT+TGG 0.547243 1:-88206710 MsG0180005185.01.T01:exon
GATTCTCCAAACGCCGAACC+AGG 0.548500 1:+88206147 None:intergenic
AACATACCAATGTATATCAT+GGG 0.550555 1:+88205748 None:intergenic
ATCATGGGTGAAGTAACGCC+AGG 0.553580 1:+88205763 None:intergenic
GTTTGTAAAGAAACTGAAAT+GGG 0.554656 1:-88206051 MsG0180005185.01.T01:exon
TTGAAGGCTTGGGCAATGGT+GGG 0.559074 1:+88206568 None:intergenic
TAGTAATGATGGAGTGTCGC+GGG 0.559804 1:-88206433 MsG0180005185.01.T01:exon
TAATCTAATATAACTATCGT+GGG 0.563028 1:-88207159 MsG0180005185.01.T01:exon
ACTTCACCCATGATATACAT+TGG 0.563673 1:-88205754 MsG0180005185.01.T01:exon
TTCTTGGAAAACGGGTTCTG+GGG 0.567841 1:-88206460 MsG0180005185.01.T01:exon
AACATGGCCTCTACAACCAA+TGG 0.568033 1:+88206222 None:intergenic
ATATGCAAGGCACTGCTGGT+TGG 0.568262 1:-88205867 MsG0180005185.01.T01:exon
TGAAGCTGCCTTCCAAAACA+TGG 0.568999 1:+88206206 None:intergenic
CAATTCAGGCCGCTTCAAAA+GGG 0.571732 1:+88206515 None:intergenic
GAGGAAGTCATCCGCACAGA+GGG 0.574609 1:-88205610 MsG0180005185.01.T01:exon
ATCGTAGTCATCGAAGGCAA+CGG 0.575286 1:-88206110 MsG0180005185.01.T01:exon
TTAATCTAATATAACTATCG+TGG 0.579849 1:-88207160 MsG0180005185.01.T01:exon
AGGGGTTGTTCAGAAGTCAA+TGG 0.582930 1:-88206358 MsG0180005185.01.T01:exon
CTGTTGCCTTGTAGTAAACA+CGG 0.586506 1:+88206410 None:intergenic
GAGTATGCTAATGACGTGCC+TGG 0.587685 1:-88206165 MsG0180005185.01.T01:exon
GCAACCCTTCAAGCCAATTG+GGG 0.592425 1:+88206697 None:intergenic
AATGGAGAAACATCCTTCGC+CGG 0.592451 1:+88206240 None:intergenic
AACCCTAAATTGGAGATTTG+GGG 0.593113 1:+88206854 None:intergenic
TGATAGATTTGCAGTAGAGA+CGG 0.595413 1:-88207122 MsG0180005185.01.T01:exon
TCGGAAAATTCAGTATCAGT+TGG 0.606485 1:+88206654 None:intergenic
GAATACTATGATGAGGTGAA+AGG 0.607430 1:+88206905 None:intergenic
GGAATAACTTGCAGATTCCA+AGG 0.607933 1:+88205829 None:intergenic
AAAGGCATAATTTCCAGGAA+CGG 0.617478 1:+88205639 None:intergenic
ACACGATTCTGCATGACTTG+GGG 0.622776 1:+88205984 None:intergenic
GATGACTTCCTCAAAAGCAA+AGG 0.625253 1:+88205621 None:intergenic
ACACTGGCTCATCAAAGACT+TGG 0.625855 1:-88205666 MsG0180005185.01.T01:exon
TGAGATATAAGCAATTGGGT+CGG 0.629574 1:+88206635 None:intergenic
GGTCGAAATTCAGGTGCCAG+TGG 0.638321 1:+88206675 None:intergenic
ACTACAAGGCAACAGGAAGT+GGG 0.648096 1:-88206402 MsG0180005185.01.T01:exon
ATCCGCACAGAGGGTTATGG+TGG 0.648464 1:-88205601 MsG0180005185.01.T01:exon
GATGCTGACAATGATATGCA+AGG 0.650720 1:-88205880 MsG0180005185.01.T01:exon
GATTCTGCATGACTTGGGGA+AGG 0.659374 1:+88205988 None:intergenic
AAATTGGGAATACTATGATG+AGG 0.671363 1:+88206898 None:intergenic
GTAGTAATGATGGAGTGTCG+CGG 0.672073 1:-88206434 MsG0180005185.01.T01:exon
GTTAGTGAGCCTGAAGCACG+AGG 0.681206 1:+88205808 None:intergenic
CGGTGGTTCCGGATCCTCGG+CGG 0.683906 1:+88207084 None:intergenic
TCGGCGTTTGGAGAATCACA+GGG 0.686552 1:-88206141 MsG0180005185.01.T01:exon
TGTAAAGAAACTGAAATGGG+TGG 0.710565 1:-88206048 MsG0180005185.01.T01:exon
CACCACCATAACCCTCTGTG+CGG 0.713502 1:+88205599 None:intergenic
AGTAGAACATATCACCGCCG+AGG 0.722085 1:-88207098 MsG0180005185.01.T01:exon
TGAGGAAGTCATCCGCACAG+AGG 0.728883 1:-88205611 MsG0180005185.01.T01:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGAAAATATGATTAAAAAA+CGG + Chr1:88203120-88203139 None:intergenic 10.0%
!! TTACATTATATTAATAAAGA+AGG + Chr1:88204057-88204076 None:intergenic 10.0%
!!! AAATACTTTAAATTTCATTT+TGG + Chr1:88207192-88207211 None:intergenic 10.0%
!!! AATTTTTTCTAAACATATAT+TGG + Chr1:88199563-88199582 None:intergenic 10.0%
!!! TAATAATAAACAATTTTTTC+CGG + Chr1:88197893-88197912 None:intergenic 10.0%
!!! TACTTTAATTTTTTTTTTTG+TGG - Chr1:88207160-88207179 MsG0180005185.01.T01:exon 10.0%
!! AAAATGTCAAAAAAACTAAA+GGG - Chr1:88198698-88198717 MsG0180005185.01.T01:CDS 15.0%
!! AACACTAAAAACAATATATT+TGG - Chr1:88201515-88201534 MsG0180005185.01.T01:intron 15.0%
!! ACACTAAAAACAATATATTT+GGG - Chr1:88201516-88201535 MsG0180005185.01.T01:intron 15.0%
!! ATAAAAAATCCAATGTTAAA+AGG - Chr1:88206342-88206361 MsG0180005185.01.T01:exon 15.0%
!! ATAGAATACTAATGTTATAT+AGG - Chr1:88203292-88203311 MsG0180005185.01.T01:intron 15.0%
!! ATATAACATTAGTATTCTAT+TGG + Chr1:88203292-88203311 None:intergenic 15.0%
!! ATTGTATATTCATGATATTA+TGG - Chr1:88203645-88203664 MsG0180005185.01.T01:intron 15.0%
!! TACTAAAAATTACAAAAGTA+TGG - Chr1:88200252-88200271 MsG0180005185.01.T01:CDS 15.0%
!! TCAAACAAATCATATTATTA+AGG + Chr1:88200061-88200080 None:intergenic 15.0%
!!! ACATTTGTTAAAAAGTATAT+TGG - Chr1:88203703-88203722 MsG0180005185.01.T01:intron 15.0%
!!! ATTAATTTCATTTGTTGTTA+GGG - Chr1:88207019-88207038 MsG0180005185.01.T01:exon 15.0%
!!! GAAAAAACATATTTTTTTGA+AGG + Chr1:88198526-88198545 None:intergenic 15.0%
!!! TATTAATTTCATTTGTTGTT+AGG - Chr1:88207018-88207037 MsG0180005185.01.T01:exon 15.0%
!!! TTGAAAATATTCATTCATTT+TGG - Chr1:88206715-88206734 MsG0180005185.01.T01:exon 15.0%
!!! TTTATTCTTTTTCATGATAT+GGG - Chr1:88198343-88198362 MsG0180005185.01.T01:exon 15.0%
!!! TTTTATTCTTTTTCATGATA+TGG - Chr1:88198342-88198361 MsG0180005185.01.T01:exon 15.0%
!!! TTTTTCTTCTTTTTTTGAAA+AGG + Chr1:88200633-88200652 None:intergenic 15.0%
!! AAATGTCAAAAAAACTAAAG+GGG - Chr1:88198699-88198718 MsG0180005185.01.T01:CDS 20.0%
!! AATACAAGATTCATGATATA+TGG + Chr1:88204180-88204199 None:intergenic 20.0%
!! AATAGAACAAATATCAAAAC+AGG + Chr1:88200093-88200112 None:intergenic 20.0%
!! AATCAGAAATTGTACATATT+TGG + Chr1:88203614-88203633 None:intergenic 20.0%
!! AATCTTGTATTGTATGAATA+AGG - Chr1:88204189-88204208 MsG0180005185.01.T01:intron 20.0%
!! ACAAATACAGTGTAATAAAA+TGG + Chr1:88200720-88200739 None:intergenic 20.0%
!! ACTCCTACAAAAATATTATT+TGG - Chr1:88203466-88203485 MsG0180005185.01.T01:intron 20.0%
!! ATAGTTTCTTAAAGAAAACA+TGG - Chr1:88200207-88200226 MsG0180005185.01.T01:CDS 20.0%
!! ATTAAACATTAATGTAAGTC+AGG - Chr1:88202377-88202396 MsG0180005185.01.T01:CDS 20.0%
!! ATTTCTTTATCATCATTTAG+AGG + Chr1:88205519-88205538 None:intergenic 20.0%
!! CAAAATGTCAAAAAAACTAA+AGG - Chr1:88198697-88198716 MsG0180005185.01.T01:CDS 20.0%
!! GAAAAACAAATAAGATGAAT+AGG + Chr1:88200677-88200696 None:intergenic 20.0%
!! TAACACAAAAGTAAATTAGA+AGG - Chr1:88200130-88200149 MsG0180005185.01.T01:CDS 20.0%
!! TAATCTAATATAACTATCGT+GGG - Chr1:88197916-88197935 MsG0180005185.01.T01:exon 20.0%
!! TAATTCTTATGTGTACAATA+TGG - Chr1:88201897-88201916 MsG0180005185.01.T01:intron 20.0%
!! TTAATCTAATATAACTATCG+TGG - Chr1:88197915-88197934 MsG0180005185.01.T01:exon 20.0%
!!! AAAAATTACAAAAGTATGGA+AGG - Chr1:88200256-88200275 MsG0180005185.01.T01:CDS 20.0%
!!! AAAGGTTTAATTTTTAACCT+TGG + Chr1:88200615-88200634 None:intergenic 20.0%
!!! AATGCTGTTTTTATATTCAA+AGG - Chr1:88202490-88202509 MsG0180005185.01.T01:CDS 20.0%
!!! ACACCAAATAATATTTTTGT+AGG + Chr1:88203472-88203491 None:intergenic 20.0%
!!! CTTTTAAGCTTAATTAGTTA+TGG - Chr1:88202291-88202310 MsG0180005185.01.T01:CDS 20.0%
!!! TACTTTTATTATATTGCTTC+TGG - Chr1:88199624-88199643 MsG0180005185.01.T01:CDS 20.0%
!!! TGTTTTTGTTTTGAAAATCT+TGG + Chr1:88203686-88203705 None:intergenic 20.0%
!!! TTAATTTCATTTGTTGTTAG+GGG - Chr1:88207020-88207039 MsG0180005185.01.T01:exon 20.0%
!!! TTTTACACTTTTACTAGAAA+AGG - Chr1:88201786-88201805 MsG0180005185.01.T01:intron 20.0%
! AAACGAGAATATAACTAATG+AGG - Chr1:88205791-88205810 MsG0180005185.01.T01:exon 25.0%
! AAAGTAGTTTAGATGATCTT+AGG - Chr1:88204146-88204165 MsG0180005185.01.T01:intron 25.0%
! AACATACCAATGTATATCAT+GGG + Chr1:88199330-88199349 None:intergenic 25.0%
! AACATTAGTATTCTATTGGT+TGG + Chr1:88203288-88203307 None:intergenic 25.0%
! AATAGTTGAAAGGAAAATAG+AGG + Chr1:88202161-88202180 None:intergenic 25.0%
! AATATATTTGGGAGAAAGTT+CGG - Chr1:88201527-88201546 MsG0180005185.01.T01:intron 25.0%
! AATTAAATAGGCAGTATCAA+TGG + Chr1:88200560-88200579 None:intergenic 25.0%
! ACACAAAATAATGAGTCTAA+AGG - Chr1:88199060-88199079 MsG0180005185.01.T01:CDS 25.0%
! ACTAATTCAACAAAGAGAAT+AGG + Chr1:88200967-88200986 None:intergenic 25.0%
! AGTATAACCATATCAGAAAT+AGG - Chr1:88205852-88205871 MsG0180005185.01.T01:exon 25.0%
! AGTATATTTGAATTGTGAAG+TGG - Chr1:88203386-88203405 MsG0180005185.01.T01:intron 25.0%
! ATAGGTATTCTTAGAAATTG+TGG + Chr1:88200453-88200472 None:intergenic 25.0%
! ATATAAAGTAGAGTTGTTTG+GGG - Chr1:88202340-88202359 MsG0180005185.01.T01:CDS 25.0%
! ATCAACAAATGACATATAGA+TGG + Chr1:88204353-88204372 None:intergenic 25.0%
! ATGTTATATTCTCATTCCTA+TGG - Chr1:88202121-88202140 MsG0180005185.01.T01:CDS 25.0%
! ATTATCATTCTGTTAAGGTT+GGG - Chr1:88203982-88204001 MsG0180005185.01.T01:intron 25.0%
! ATTATGTTTAATGACATGGA+TGG - Chr1:88202217-88202236 MsG0180005185.01.T01:CDS 25.0%
! ATTTGTTTCGAATACTGAAA+AGG - Chr1:88205926-88205945 MsG0180005185.01.T01:exon 25.0%
! CATAATCTTATTCAAAGTGA+TGG + Chr1:88199813-88199832 None:intergenic 25.0%
! CATATAAAGTAGAGTTGTTT+GGG - Chr1:88202339-88202358 MsG0180005185.01.T01:CDS 25.0%
! CATGATTGAATGAAAATGAA+TGG - Chr1:88203576-88203595 MsG0180005185.01.T01:intron 25.0%
! CATGGTAAATATGAAATAGA+AGG - Chr1:88200225-88200244 MsG0180005185.01.T01:CDS 25.0%
! GAAATAAACATTCCAATTGT+TGG + Chr1:88200303-88200322 None:intergenic 25.0%
! GAAGAAAAAAAAGAGGAAAA+TGG - Chr1:88206136-88206155 MsG0180005185.01.T01:exon 25.0%
! GATGATTATAGAAACTCAAA+TGG - Chr1:88201567-88201586 MsG0180005185.01.T01:intron 25.0%
! GCTATAATGATATATTGCAT+TGG - Chr1:88203408-88203427 MsG0180005185.01.T01:intron 25.0%
! GGTTGTATTAATGTCATAAA+TGG + Chr1:88202985-88203004 None:intergenic 25.0%
! GTTTGTAAAGAAACTGAAAT+GGG - Chr1:88199024-88199043 MsG0180005185.01.T01:CDS 25.0%
! TAAAGTCATAGCAATCAAAT+TGG + Chr1:88206178-88206197 None:intergenic 25.0%
! TAGAAAAAATTTCGCATCTA+TGG - Chr1:88199572-88199591 MsG0180005185.01.T01:CDS 25.0%
! TATTCTTAGAAATTGTGGTT+GGG + Chr1:88200448-88200467 None:intergenic 25.0%
! TCAATTAAAATGTTCTAGTG+AGG - Chr1:88201720-88201739 MsG0180005185.01.T01:intron 25.0%
! TCTTTATTGAATCTTGCAAT+AGG - Chr1:88204121-88204140 MsG0180005185.01.T01:intron 25.0%
! TGTACAATATGGTGAAATAA+AGG - Chr1:88201908-88201927 MsG0180005185.01.T01:intron 25.0%
! TGTCAGAACAATAAATATTC+TGG - Chr1:88205180-88205199 MsG0180005185.01.T01:intron 25.0%
! TGTGATAACTTAGATTTAGA+TGG - Chr1:88205279-88205298 MsG0180005185.01.T01:intron 25.0%
! TGTTTGTAAAGAAACTGAAA+TGG - Chr1:88199023-88199042 MsG0180005185.01.T01:CDS 25.0%
! TTATATTGAAGATTGAAGAG+AGG + Chr1:88201880-88201899 None:intergenic 25.0%
! TTATGTTTAATGACATGGAT+GGG - Chr1:88202218-88202237 MsG0180005185.01.T01:CDS 25.0%
! TTCTTATATTTCCTAGCAAA+TGG - Chr1:88199747-88199766 MsG0180005185.01.T01:CDS 25.0%
! TTTCATTCAATCATGAGATA+AGG + Chr1:88203571-88203590 None:intergenic 25.0%
! TTTGCATTATCATTCTGTTA+AGG - Chr1:88203977-88203996 MsG0180005185.01.T01:intron 25.0%
!! AATTCTGAAAAACCCTAAAT+TGG + Chr1:88198234-88198253 None:intergenic 25.0%
!! ATGGATTATGTTTAATGACA+TGG - Chr1:88202213-88202232 MsG0180005185.01.T01:CDS 25.0%
!! CATTAGTTATATTCTCGTTT+TGG + Chr1:88205791-88205810 None:intergenic 25.0%
!! CTATTTTCCTTTCAACTATT+TGG - Chr1:88202161-88202180 MsG0180005185.01.T01:CDS 25.0%
!! GAATAAGATTATGTTTTCCA+AGG - Chr1:88199820-88199839 MsG0180005185.01.T01:CDS 25.0%
!! GTTTTTACTCTGTAATATGA+TGG - Chr1:88201143-88201162 MsG0180005185.01.T01:intron 25.0%
!!! AAATAAAGGTTTTAACTGTG+GGG - Chr1:88201922-88201941 MsG0180005185.01.T01:intron 25.0%
!!! AACATATTTTTTTGAAGGCT+TGG + Chr1:88198521-88198540 None:intergenic 25.0%
!!! AAGTAAGTTTTTGACTGAAA+TGG - Chr1:88205485-88205504 MsG0180005185.01.T01:intron 25.0%
!!! ACATATTTTTTTGAAGGCTT+GGG + Chr1:88198520-88198539 None:intergenic 25.0%
!!! ATCTTTGAGATATAAGCAAT+TGG + Chr1:88198448-88198467 None:intergenic 25.0%
!!! ATGAATGAATATTTTCAAGC+AGG + Chr1:88206713-88206732 None:intergenic 25.0%
!!! CTACTAAAGAAGTTGTTTTA+TGG - Chr1:88202704-88202723 MsG0180005185.01.T01:intron 25.0%
!!! CTCATGTGATTTTTGAAAAT+TGG + Chr1:88200029-88200048 None:intergenic 25.0%
!!! GAAATAAAGGTTTTAACTGT+GGG - Chr1:88201921-88201940 MsG0180005185.01.T01:intron 25.0%
!!! TAATTTCATTTGTTGTTAGG+GGG - Chr1:88207021-88207040 MsG0180005185.01.T01:exon 25.0%
!!! TAGTTCTTTTAAGTCTTCAT+TGG - Chr1:88206968-88206987 MsG0180005185.01.T01:exon 25.0%
!!! TCTTTGAGATATAAGCAATT+GGG + Chr1:88198447-88198466 None:intergenic 25.0%
!!! TGAAATAAAGGTTTTAACTG+TGG - Chr1:88201920-88201939 MsG0180005185.01.T01:intron 25.0%
!!! TGTATTACTAGTTTTTTGTG+CGG + Chr1:88200327-88200346 None:intergenic 25.0%
AAAAAAAAGCAGAATCGTGA+AGG + Chr1:88204440-88204459 None:intergenic 30.0%
AAAACCCTAAATTGGAGATT+TGG + Chr1:88198226-88198245 None:intergenic 30.0%
AAAACTGAGACAGAATAATC+TGG + Chr1:88204269-88204288 None:intergenic 30.0%
AAACCCTAAATTGGAGATTT+GGG + Chr1:88198225-88198244 None:intergenic 30.0%
AAAGATGAGAGTAACAAACA+AGG - Chr1:88207049-88207068 MsG0180005185.01.T01:exon 30.0%
AAAGGACTGATTATAAGAGT+AGG - Chr1:88198989-88199008 MsG0180005185.01.T01:CDS 30.0%
AAATTGGGAATACTATGATG+AGG + Chr1:88198180-88198199 None:intergenic 30.0%
AACTCATATGGCAATTATCA+AGG + Chr1:88206382-88206401 None:intergenic 30.0%
AACTTAGATTTAGATGGTGA+AGG - Chr1:88205285-88205304 MsG0180005185.01.T01:intron 30.0%
AACTTGATGAATGTGAAGAT+TGG - Chr1:88204599-88204618 MsG0180005185.01.T01:intron 30.0%
AAGAGAGATTCTAGTAAAAC+AGG - Chr1:88202621-88202640 MsG0180005185.01.T01:intron 30.0%
AAGGACTGATTATAAGAGTA+GGG - Chr1:88198990-88199009 MsG0180005185.01.T01:CDS 30.0%
AATTGTGTGAATCTACAAGT+GGG - Chr1:88205706-88205725 MsG0180005185.01.T01:exon 30.0%
AATTTGTCAAACACAGATGA+AGG - Chr1:88200506-88200525 MsG0180005185.01.T01:CDS 30.0%
ACAGTATTCTGCAAAATATC+AGG + Chr1:88201115-88201134 None:intergenic 30.0%
ACCAACTGAGAAATTGATAA+TGG - Chr1:88203002-88203021 MsG0180005185.01.T01:intron 30.0%
ACTCTACTTTATATGCAGTA+AGG + Chr1:88202334-88202353 None:intergenic 30.0%
ACTTAGATTTAGATGGTGAA+GGG - Chr1:88205286-88205305 MsG0180005185.01.T01:intron 30.0%
AGAAACTGCTTCAATATTCA+AGG - Chr1:88204872-88204891 MsG0180005185.01.T01:intron 30.0%
AGAATTCTAGCGTTATTAGA+GGG - Chr1:88206876-88206895 MsG0180005185.01.T01:exon 30.0%
AGATTGTATACAAGTTGTGT+TGG + Chr1:88202097-88202116 None:intergenic 30.0%
AGTATTCAAACTCATACTAG+TGG + Chr1:88205124-88205143 None:intergenic 30.0%
AGTATTCCCAATTTCTTCAA+AGG - Chr1:88198186-88198205 MsG0180005185.01.T01:exon 30.0%
ATACTGGGAAGAAAAAAAAG+AGG - Chr1:88206129-88206148 MsG0180005185.01.T01:exon 30.0%
ATATATTTGGGAGAAAGTTC+GGG - Chr1:88201528-88201547 MsG0180005185.01.T01:intron 30.0%
ATGACATATGCACATGTTAT+AGG + Chr1:88206750-88206769 None:intergenic 30.0%
ATGGCAAATTATAAGCACAT+TGG + Chr1:88203929-88203948 None:intergenic 30.0%
ATTAGTAATAATATCCGTGC+CGG - Chr1:88200981-88201000 MsG0180005185.01.T01:intron 30.0%
ATTGTACATTTCTTAGTTCC+TGG - Chr1:88203260-88203279 MsG0180005185.01.T01:intron 30.0%
ATTTATTGTTCTGACAATCC+TGG + Chr1:88205176-88205195 None:intergenic 30.0%
CAACATACCAATGTATATCA+TGG + Chr1:88199331-88199350 None:intergenic 30.0%
CAAGACTTGATCTGTATATT+TGG - Chr1:88199683-88199702 MsG0180005185.01.T01:CDS 30.0%
CACAACTTGTATACAATCTA+TGG - Chr1:88202098-88202117 MsG0180005185.01.T01:CDS 30.0%
CATCCAAGTTTACTGTATTA+TGG + Chr1:88205608-88205627 None:intergenic 30.0%
CATTATCATTCTGTTAAGGT+TGG - Chr1:88203981-88204000 MsG0180005185.01.T01:intron 30.0%
CTTCCATAATACAGTAAACT+TGG - Chr1:88205602-88205621 MsG0180005185.01.T01:exon 30.0%
GCATAAATGAAAATGCTGAT+TGG - Chr1:88201476-88201495 MsG0180005185.01.T01:intron 30.0%
GCATATAAAGTAGAGTTGTT+TGG - Chr1:88202338-88202357 MsG0180005185.01.T01:CDS 30.0%
GTATCTAGTTATGTTGCAAA+AGG - Chr1:88205819-88205838 MsG0180005185.01.T01:exon 30.0%
GTATTCAAACTCATACTAGT+GGG + Chr1:88205123-88205142 None:intergenic 30.0%
GTATTCTTAGAAATTGTGGT+TGG + Chr1:88200449-88200468 None:intergenic 30.0%
GTCCTGGTTTATCTTTAAAT+TGG - Chr1:88204731-88204750 MsG0180005185.01.T01:intron 30.0%
TAAACCCTATAATTTCACCA+AGG - Chr1:88204311-88204330 MsG0180005185.01.T01:intron 30.0%
TAACCACTTCCAAATGAATT+GGG + Chr1:88206857-88206876 None:intergenic 30.0%
TAAGAATGTGTGAATTCTCT+TGG - Chr1:88199927-88199946 MsG0180005185.01.T01:CDS 30.0%
TAGAATTCTAGCGTTATTAG+AGG - Chr1:88206875-88206894 MsG0180005185.01.T01:exon 30.0%
TAGACCTTGGTGAAATTATA+GGG + Chr1:88204318-88204337 None:intergenic 30.0%
TAGTGAGAAAGTGAATAAAG+TGG - Chr1:88201689-88201708 MsG0180005185.01.T01:intron 30.0%
TATTTAATTCCCGTACTGTA+CGG - Chr1:88200571-88200590 MsG0180005185.01.T01:CDS 30.0%
TCACCTTGAAATAAAAGACA+TGG + Chr1:88202065-88202084 None:intergenic 30.0%
TCATTCCTATGGAATATGAA+TGG - Chr1:88202132-88202151 MsG0180005185.01.T01:CDS 30.0%
TCCAAGGATGATAAAGTAAT+TGG - Chr1:88199836-88199855 MsG0180005185.01.T01:CDS 30.0%
TCCATTATCAATTTCTCAGT+TGG + Chr1:88203006-88203025 None:intergenic 30.0%
TCTTCAACTAGATGATTATC+AGG + Chr1:88203033-88203052 None:intergenic 30.0%
TGAAAGTCCAATTAATAACC+AGG - Chr1:88205410-88205429 MsG0180005185.01.T01:intron 30.0%
TGATATTATGGAAGCTGATA+TGG - Chr1:88203657-88203676 MsG0180005185.01.T01:intron 30.0%
TGCCAATTTAAAGATAAACC+AGG + Chr1:88204736-88204755 None:intergenic 30.0%
TGTAGACTATCCGAAAATAA+AGG - Chr1:88204459-88204478 MsG0180005185.01.T01:intron 30.0%
TGTGCATATGTCATATAGTA+AGG - Chr1:88206756-88206775 MsG0180005185.01.T01:exon 30.0%
TTAGACCTTGGTGAAATTAT+AGG + Chr1:88204319-88204338 None:intergenic 30.0%
TTAGCATACTCCACATAAAT+AGG + Chr1:88198901-88198920 None:intergenic 30.0%
TTCACCAAGGTCTAATAAAA+AGG - Chr1:88204324-88204343 MsG0180005185.01.T01:intron 30.0%
TTCGAATACTGAAAAGGAAA+TGG - Chr1:88205932-88205951 MsG0180005185.01.T01:exon 30.0%
TTCTGGATTTCATTATGCAA+TGG + Chr1:88205090-88205109 None:intergenic 30.0%
TTGAATACATGAGTCTTCTT+CGG + Chr1:88205907-88205926 None:intergenic 30.0%
TTGGTGAAATTATAGGGTTT+AGG + Chr1:88204312-88204331 None:intergenic 30.0%
! AACAGAATGATAATGCAAAC+AGG + Chr1:88203976-88203995 None:intergenic 30.0%
! AATTTTATCGTAGTCATCGA+AGG - Chr1:88198959-88198978 MsG0180005185.01.T01:CDS 30.0%
! ACAATGCAAGTTGAACAAAA+AGG + Chr1:88198298-88198317 None:intergenic 30.0%
! ACATTGGTATGTTGTTTAGT+TGG - Chr1:88199337-88199356 MsG0180005185.01.T01:CDS 30.0%
! AGTTATGTTATCTGTTTTCC+AGG - Chr1:88203739-88203758 MsG0180005185.01.T01:intron 30.0%
! ATTTTCCCTTTGTATCTTAG+AGG - Chr1:88201814-88201833 MsG0180005185.01.T01:intron 30.0%
! CAAGGGTGAAATATGTTTTT+AGG - Chr1:88201356-88201375 MsG0180005185.01.T01:intron 30.0%
! CTATCAAAGCCAAATTTTCT+GGG + Chr1:88204558-88204577 None:intergenic 30.0%
! GATTCCTTTTTATTAGACCT+TGG + Chr1:88204331-88204350 None:intergenic 30.0%
! GTAAAAGGAACTTGTTTACA+TGG + Chr1:88204679-88204698 None:intergenic 30.0%
! GTAGGAGTAATTTGACATTT+TGG + Chr1:88203454-88203473 None:intergenic 30.0%
! GTTATGTTATCTGTTTTCCA+GGG - Chr1:88203740-88203759 MsG0180005185.01.T01:intron 30.0%
! TAGAAACTCAAATGGTGTTT+TGG - Chr1:88201575-88201594 MsG0180005185.01.T01:intron 30.0%
! TATCAAAGCCAAATTTTCTG+GGG + Chr1:88204557-88204576 None:intergenic 30.0%
! TATTGTTTGAGATCCATAGT+TGG - Chr1:88200922-88200941 MsG0180005185.01.T01:intron 30.0%
! TCTATCAAAGCCAAATTTTC+TGG + Chr1:88204559-88204578 None:intergenic 30.0%
! TGCTTACCTTTGAAGAAATT+GGG + Chr1:88198195-88198214 None:intergenic 30.0%
! TGTTTTATCTACTGCTTCAT+TGG - Chr1:88205350-88205369 MsG0180005185.01.T01:intron 30.0%
! TTATGTTATCTGTTTTCCAG+GGG - Chr1:88203741-88203760 MsG0180005185.01.T01:intron 30.0%
! TTGCTTACCTTTGAAGAAAT+TGG + Chr1:88198196-88198215 None:intergenic 30.0%
!! AAATTATGCCTTTGCTTTTG+AGG - Chr1:88199446-88199465 MsG0180005185.01.T01:CDS 30.0%
!! AAATTTGGCTTTGATAGATC+TGG - Chr1:88204561-88204580 MsG0180005185.01.T01:intron 30.0%
!! AAGTGCTTTTGATTATAACG+AGG - Chr1:88204513-88204532 MsG0180005185.01.T01:intron 30.0%
!! AGAACATCCTATTTCTGATA+TGG + Chr1:88205862-88205881 None:intergenic 30.0%
!! AGATTCACACAATTGTTTTG+TGG + Chr1:88205700-88205719 None:intergenic 30.0%
!! ATTCAAAGTGATGGATATTG+AGG + Chr1:88199804-88199823 None:intergenic 30.0%
!! GGTTTAATTTTTAACCTTGG+AGG + Chr1:88200612-88200631 None:intergenic 30.0%
!! TGACCATGTCTTTTATTTCA+AGG - Chr1:88202059-88202078 MsG0180005185.01.T01:CDS 30.0%
!! TTGATTTGTCACAAGATGAT+GGG - Chr1:88206063-88206082 MsG0180005185.01.T01:exon 30.0%
!! TTGTTTTGTGGAAATATGAG+TGG + Chr1:88205688-88205707 None:intergenic 30.0%
!!! AATGACACGACATTTTTTCA+AGG - Chr1:88201338-88201357 MsG0180005185.01.T01:intron 30.0%
!!! ATGACACGACATTTTTTCAA+GGG - Chr1:88201339-88201358 MsG0180005185.01.T01:intron 30.0%
!!! TAATGCATGCTGTGTTTTTT+TGG - Chr1:88204377-88204396 MsG0180005185.01.T01:intron 30.0%
!!! TGCTTATTTTTTGCTCTTGT+TGG + Chr1:88201454-88201473 None:intergenic 30.0%
AAACTTCAAAGCAATTACCG+TGG + Chr1:88201083-88201102 None:intergenic 35.0%
AAAGAGGAAAATGGAAGACA+CGG - Chr1:88206145-88206164 MsG0180005185.01.T01:exon 35.0%
AAAGTCACAACAAATTCACC+CGG + Chr1:88201033-88201052 None:intergenic 35.0%
AACCAAATTACTGAAGCCAT+TGG - Chr1:88205249-88205268 MsG0180005185.01.T01:intron 35.0%
AACCCTAAATTGGAGATTTG+GGG + Chr1:88198224-88198243 None:intergenic 35.0%
AAGTTCCCAGATCAAATACT+GGG - Chr1:88206114-88206133 MsG0180005185.01.T01:exon 35.0%
AATCCTACATGATAAGCTCT+TGG + Chr1:88201057-88201076 None:intergenic 35.0%
AATCTTCAAACAGACCTGAA+TGG + Chr1:88203948-88203967 None:intergenic 35.0%
AATGAAGGATGATCAATTGC+AGG - Chr1:88204822-88204841 MsG0180005185.01.T01:intron 35.0%
ACAGAGAAACAACTTTGCTT+TGG + Chr1:88204910-88204929 None:intergenic 35.0%
ACCTTTCCATGTGCATTTAA+AGG + Chr1:88206528-88206547 None:intergenic 35.0%
ACTAACCTAGAAAGAAACAC+CGG + Chr1:88201003-88201022 None:intergenic 35.0%
ACTAGCACCAAATAGTTGAA+AGG + Chr1:88202171-88202190 None:intergenic 35.0%
ACTTCACCCATGATATACAT+TGG - Chr1:88199321-88199340 MsG0180005185.01.T01:CDS 35.0%
AGAATTGCTAACCCTTTCTT+CGG + Chr1:88205436-88205455 None:intergenic 35.0%
AGCAGAAAAAACACCAACTA+TGG + Chr1:88200938-88200957 None:intergenic 35.0%
AGCAGAAAGCTGGTAAATTT+GGG - Chr1:88198470-88198489 MsG0180005185.01.T01:CDS 35.0%
AGGAAAATCCAGTAGCTAAA+AGG - Chr1:88206282-88206301 MsG0180005185.01.T01:exon 35.0%
AGTTCTTTCATGCTTATGGA+AGG - Chr1:88199648-88199667 MsG0180005185.01.T01:CDS 35.0%
ATTAATGTAAGTCAGGTCTG+AGG - Chr1:88202384-88202403 MsG0180005185.01.T01:CDS 35.0%
ATTAGCCACTACATGTATGA+CGG - Chr1:88203188-88203207 MsG0180005185.01.T01:intron 35.0%
ATTGCCTCATCGATATAGAT+TGG + Chr1:88199881-88199900 None:intergenic 35.0%
ATTGTGTGAATCTACAAGTG+GGG - Chr1:88205707-88205726 MsG0180005185.01.T01:exon 35.0%
ATTTAATTCCCGTACTGTAC+GGG - Chr1:88200572-88200591 MsG0180005185.01.T01:CDS 35.0%
ATTTAGACCTGTTTGGCATA+TGG - Chr1:88201199-88201218 MsG0180005185.01.T01:CDS 35.0%
CAAAGTAGAGTGCGAAATTT+GGG + Chr1:88198096-88198115 None:intergenic 35.0%
CAATTGCAGGAAAGAATTGA+TGG - Chr1:88204835-88204854 MsG0180005185.01.T01:intron 35.0%
CAATTGTGTGAATCTACAAG+TGG - Chr1:88205705-88205724 MsG0180005185.01.T01:exon 35.0%
CCACTTATAAACACATTGTC+GGG + Chr1:88200380-88200399 None:intergenic 35.0%
CCCACTTATAAACACATTGT+CGG + Chr1:88200381-88200400 None:intergenic 35.0%
CCGACAATGTGTTTATAAGT+GGG - Chr1:88200378-88200397 MsG0180005185.01.T01:CDS 35.0%
CCTTATCAATGTAAGGTTGA+GGG - Chr1:88206614-88206633 MsG0180005185.01.T01:exon 35.0%
CCTTTCCATGTGCATTTAAA+GGG + Chr1:88206527-88206546 None:intergenic 35.0%
CGACAATGTGTTTATAAGTG+GGG - Chr1:88200379-88200398 MsG0180005185.01.T01:CDS 35.0%
CTAAACTAGGTCTTAATCTG+CGG - Chr1:88204626-88204645 MsG0180005185.01.T01:intron 35.0%
CTAACCACTTCCAAATGAAT+TGG + Chr1:88206858-88206877 None:intergenic 35.0%
GAAATTATAGGGTTTAGGCA+GGG + Chr1:88204307-88204326 None:intergenic 35.0%
GAAGATTGGACATCTAAACT+AGG - Chr1:88204613-88204632 MsG0180005185.01.T01:intron 35.0%
GAATACTATGATGAGGTGAA+AGG + Chr1:88198173-88198192 None:intergenic 35.0%
GACAAAAATGTCGATGTGTT+TGG - Chr1:88205222-88205241 MsG0180005185.01.T01:intron 35.0%
GACAATGTGTTTATAAGTGG+GGG - Chr1:88200380-88200399 MsG0180005185.01.T01:CDS 35.0%
GAGTTTGAATACTAGTGTCT+CGG - Chr1:88205131-88205150 MsG0180005185.01.T01:intron 35.0%
GATTGCAACACATCATACAT+TGG + Chr1:88204404-88204423 None:intergenic 35.0%
GCCAATTACTTTATCATCCT+TGG + Chr1:88199840-88199859 None:intergenic 35.0%
GGTTAAGCAAAATAGCGAAA+TGG + Chr1:88198152-88198171 None:intergenic 35.0%
GTACAGTACGGGAATTAAAT+AGG + Chr1:88200572-88200591 None:intergenic 35.0%
GTGAATCAATGCGTATTTGT+GGG + Chr1:88206480-88206499 None:intergenic 35.0%
GTGCAGTAAGGACATTAATA+AGG + Chr1:88203357-88203376 None:intergenic 35.0%
TACACTAGTAAGCTGTAAAC+AGG + Chr1:88207118-88207137 None:intergenic 35.0%
TACATGTTAGAGTCTCACAT+CGG - Chr1:88200343-88200362 MsG0180005185.01.T01:CDS 35.0%
TACCAATGGCTTCAGTAATT+TGG + Chr1:88205254-88205273 None:intergenic 35.0%
TATGCCAATCTATATCGATG+AGG - Chr1:88199874-88199893 MsG0180005185.01.T01:CDS 35.0%
TATTGCATCCCCAGAAAATT+TGG - Chr1:88204546-88204565 MsG0180005185.01.T01:intron 35.0%
TCATTGAAAGAGACAACTGA+GGG - Chr1:88205459-88205478 MsG0180005185.01.T01:intron 35.0%
TCCTCATCAACTCTAGTAAT+GGG + Chr1:88205966-88205985 None:intergenic 35.0%
TCGGAAAATTCAGTATCAGT+TGG + Chr1:88198424-88198443 None:intergenic 35.0%
TCTCTCTTTCTTCTTTCTGA+CGG + Chr1:88202609-88202628 None:intergenic 35.0%
TGAAATTATAGGGTTTAGGC+AGG + Chr1:88204308-88204327 None:intergenic 35.0%
TGAACGAGTGCAATAAATGT+TGG - Chr1:88203815-88203834 MsG0180005185.01.T01:intron 35.0%
TGAATACATGAGTCTTCTTC+GGG + Chr1:88205906-88205925 None:intergenic 35.0%
TGACAACATTCAGAGAATGA+AGG - Chr1:88204807-88204826 MsG0180005185.01.T01:intron 35.0%
TGAGATATAAGCAATTGGGT+CGG + Chr1:88198443-88198462 None:intergenic 35.0%
TGATAGATTTGCAGTAGAGA+CGG - Chr1:88197953-88197972 MsG0180005185.01.T01:exon 35.0%
TGATTATAACGAGGTTCCAA+TGG - Chr1:88204522-88204541 MsG0180005185.01.T01:intron 35.0%
TGCAGTAAGGATATTAGCAA+AGG + Chr1:88202321-88202340 None:intergenic 35.0%
TGCTGGTAATTCTTGGAAAA+CGG - Chr1:88198606-88198625 MsG0180005185.01.T01:CDS 35.0%
TGGAAGTTCTTTCATGCTTA+TGG - Chr1:88199644-88199663 MsG0180005185.01.T01:CDS 35.0%
TGTAAACAGGACTATGTAAG+AGG + Chr1:88207105-88207124 None:intergenic 35.0%
TGTAAAGAAACTGAAATGGG+TGG - Chr1:88199027-88199046 MsG0180005185.01.T01:CDS 35.0%
TTATCAAGGTCACACTTATG+CGG + Chr1:88206368-88206387 None:intergenic 35.0%
TTCAGAAAGTAGCCAACAAT+TGG - Chr1:88200288-88200307 MsG0180005185.01.T01:CDS 35.0%
TTCAGAGAAGCCTATTTATG+TGG - Chr1:88198888-88198907 MsG0180005185.01.T01:CDS 35.0%
TTCATTCTCTGAATGTTGTC+AGG + Chr1:88204808-88204827 None:intergenic 35.0%
TTCCCCAAATCTCCAATTTA+GGG - Chr1:88198219-88198238 MsG0180005185.01.T01:exon 35.0%
TTCCTCATCAACTCTAGTAA+TGG + Chr1:88205967-88205986 None:intergenic 35.0%
TTCTAGGTTAGTACAGAATC+CGG - Chr1:88201011-88201030 MsG0180005185.01.T01:intron 35.0%
TTCTCAAACCGAGAAAAAGA+CGG - Chr1:88206010-88206029 MsG0180005185.01.T01:exon 35.0%
TTCTTCCCAGTATTTGATCT+GGG + Chr1:88206122-88206141 None:intergenic 35.0%
TTGAGTTATACTGTCTTGTG+AGG - Chr1:88201850-88201869 MsG0180005185.01.T01:intron 35.0%
TTGATAGATCTGGCAATTGA+TGG - Chr1:88204571-88204590 MsG0180005185.01.T01:intron 35.0%
TTGCAGAATACTGTTGTTGT+AGG - Chr1:88201121-88201140 MsG0180005185.01.T01:intron 35.0%
TTGGCATAGACTACTTAAGT+TGG + Chr1:88199862-88199881 None:intergenic 35.0%
TTTCCAAGAGCTTATCATGT+AGG - Chr1:88201051-88201070 MsG0180005185.01.T01:intron 35.0%
TTTCCCCAAATCTCCAATTT+AGG - Chr1:88198218-88198237 MsG0180005185.01.T01:exon 35.0%
TTTCTTCCCAGTATTTGATC+TGG + Chr1:88206123-88206142 None:intergenic 35.0%
! AAAGCAAAGGCATAATTTCC+AGG + Chr1:88199444-88199463 None:intergenic 35.0%
! AAAGGCATAATTTCCAGGAA+CGG + Chr1:88199439-88199458 None:intergenic 35.0%
! AACTACTCTTTTATCACCTG+AGG - Chr1:88200796-88200815 MsG0180005185.01.T01:intron 35.0%
! AGCTTCTTTTCCAAGAAGAA+TGG + Chr1:88202686-88202705 None:intergenic 35.0%
! AGCTTGAATTTTCTTCACAC+TGG - Chr1:88199393-88199412 MsG0180005185.01.T01:CDS 35.0%
! ATATGATGGAGTGATAATGC+TGG - Chr1:88201157-88201176 MsG0180005185.01.T01:CDS 35.0%
! ATTGCACGATGAAGTGATTT+TGG - Chr1:88205743-88205762 MsG0180005185.01.T01:exon 35.0%
! ATTTTTAACCTTGGAGGTCT+TGG + Chr1:88200606-88200625 None:intergenic 35.0%
! CAAAACAGCTGACACATTTT+TGG + Chr1:88204965-88204984 None:intergenic 35.0%
! GGAAAAGAACTTGCTCTAAA+TGG - Chr1:88201763-88201782 MsG0180005185.01.T01:intron 35.0%
! GGTTAGCTAGCTGTAAATTA+AGG - Chr1:88206806-88206825 MsG0180005185.01.T01:exon 35.0%
! GTGCTTATAATTTGCCATTC+AGG - Chr1:88203931-88203950 MsG0180005185.01.T01:intron 35.0%
! GTTGATTTACTACCAGATTC+TGG - Chr1:88202730-88202749 MsG0180005185.01.T01:intron 35.0%
! TCTGAAATCATCTCCTTAGA+AGG + Chr1:88199177-88199196 None:intergenic 35.0%
! TGATTTGTCACAAGATGATG+GGG - Chr1:88206064-88206083 MsG0180005185.01.T01:exon 35.0%
! TGTTGATTGCATGTACTTGA+AGG - Chr1:88206945-88206964 MsG0180005185.01.T01:exon 35.0%
!! ACACATTTTTGGACTTCTCA+TGG + Chr1:88204954-88204973 None:intergenic 35.0%
!! CACATTTTTGGACTTCTCAT+GGG + Chr1:88204953-88204972 None:intergenic 35.0%
!! CTCTCTCTCTAAAAAGTGTT+CGG - Chr1:88198054-88198073 MsG0180005185.01.T01:exon 35.0%
!! GGTTCATATCAGATTTTAGC+AGG - Chr1:88206654-88206673 MsG0180005185.01.T01:exon 35.0%
!! GTTGATTTGTCACAAGATGA+TGG - Chr1:88206062-88206081 MsG0180005185.01.T01:exon 35.0%
!! TATTCTGGCTCACTTACAAA+TGG - Chr1:88205195-88205214 MsG0180005185.01.T01:intron 35.0%
!! TGAATAAGTCCCTTTTGAAG+CGG - Chr1:88198551-88198570 MsG0180005185.01.T01:CDS 35.0%
!! TTCTACTTCTGGAACCTATA+TGG - Chr1:88202780-88202799 MsG0180005185.01.T01:intron 35.0%
!!! TTGGATTTTTTATCCTTGCG+AGG + Chr1:88206335-88206354 None:intergenic 35.0%
AAAATGCAGCATAGAGAACC+AGG - Chr1:88205155-88205174 MsG0180005185.01.T01:intron 40.0%
AAACACGATTCTGCATGACT+TGG + Chr1:88199096-88199115 None:intergenic 40.0%
AAAGCCCAAAATTCACTACC+AGG + Chr1:88201425-88201444 None:intergenic 40.0%
AACACGATTCTGCATGACTT+GGG + Chr1:88199095-88199114 None:intergenic 40.0%
AAGCCCAAAATTCACTACCA+GGG + Chr1:88201424-88201443 None:intergenic 40.0%
AAGCTGCTATCCATTCTTCT+TGG - Chr1:88202673-88202692 MsG0180005185.01.T01:intron 40.0%
ACAAGTGGGGAATATGCAAA+GGG - Chr1:88205720-88205739 MsG0180005185.01.T01:exon 40.0%
ACACCAGGTAATAGTGTTCT+TGG + Chr1:88202565-88202584 None:intergenic 40.0%
ACTGAAGAATCAGTGCAGTA+AGG + Chr1:88203369-88203388 None:intergenic 40.0%
ACTTGAGACTGCACTATGAA+GGG + Chr1:88203079-88203098 None:intergenic 40.0%
AGAACTGAGAAGATTGCTAC+AGG - Chr1:88206227-88206246 MsG0180005185.01.T01:exon 40.0%
AGCTTGACACAGACAATTTC+AGG - Chr1:88205019-88205038 MsG0180005185.01.T01:intron 40.0%
ATAGGCCCTTTAAATGCACA+TGG - Chr1:88206519-88206538 MsG0180005185.01.T01:exon 40.0%
ATCCAGTAGCTAAAAGGACA+CGG - Chr1:88206288-88206307 MsG0180005185.01.T01:exon 40.0%
ATGCCCAATTCATTTGGAAG+TGG - Chr1:88206851-88206870 MsG0180005185.01.T01:exon 40.0%
ATTTCACAAACGTCTGCAGT+AGG + Chr1:88205555-88205574 None:intergenic 40.0%
ATTTCCTAGCAAATGGCCAA+TGG - Chr1:88199754-88199773 MsG0180005185.01.T01:CDS 40.0%
ATTTGACATGTCCGCCATAT+AGG + Chr1:88202797-88202816 None:intergenic 40.0%
CAAGTAAAGCAGTTGCTGAT+GGG + Chr1:88202038-88202057 None:intergenic 40.0%
CAATGTGAGAAGACCAATAG+AGG - Chr1:88201663-88201682 MsG0180005185.01.T01:intron 40.0%
CACAGAAAGCTCGATCTAAA+AGG - Chr1:88204758-88204777 MsG0180005185.01.T01:intron 40.0%
CAGTTCTATGATAAACGTCC+TGG - Chr1:88204715-88204734 MsG0180005185.01.T01:intron 40.0%
CATAAGCAAGTTTGGCAAAG+TGG - Chr1:88198748-88198767 MsG0180005185.01.T01:CDS 40.0%
CATGTCATTCAAGTGGTCAT+GGG - Chr1:88206553-88206572 MsG0180005185.01.T01:exon 40.0%
CATGTGTCCATAAGCAAGTT+TGG - Chr1:88198740-88198759 MsG0180005185.01.T01:CDS 40.0%
CCAGAAGTAGAAGCTAAATC+AGG + Chr1:88202772-88202791 None:intergenic 40.0%
CCCGACAATGTGTTTATAAG+TGG - Chr1:88200377-88200396 MsG0180005185.01.T01:CDS 40.0%
CCCTCAACCTTACATTGATA+AGG + Chr1:88206617-88206636 None:intergenic 40.0%
CCCTTTAAATGCACATGGAA+AGG - Chr1:88206524-88206543 MsG0180005185.01.T01:exon 40.0%
CGATGAGATGAGTTTGTACA+TGG - Chr1:88202858-88202877 MsG0180005185.01.T01:intron 40.0%
CTAGCTAACCAGAATGCTTA+TGG + Chr1:88206796-88206815 None:intergenic 40.0%
CTCTAACTCTTTGTGATGCA+TGG - Chr1:88202194-88202213 MsG0180005185.01.T01:CDS 40.0%
CTGTTGCCTTGTAGTAAACA+CGG + Chr1:88198668-88198687 None:intergenic 40.0%
CTTTCTGACCATAAGCATTC+TGG - Chr1:88206785-88206804 MsG0180005185.01.T01:exon 40.0%
GAAGTTCCCAGATCAAATAC+TGG - Chr1:88206113-88206132 MsG0180005185.01.T01:exon 40.0%
GAATCAGTTTGGAAGTGACA+TGG + Chr1:88202922-88202941 None:intergenic 40.0%
GAATGTGTGAATTCTCTTGG+TGG - Chr1:88199930-88199949 MsG0180005185.01.T01:CDS 40.0%
GAGCAGAAAGCTGGTAAATT+TGG - Chr1:88198469-88198488 MsG0180005185.01.T01:CDS 40.0%
GATGACTTCCTCAAAAGCAA+AGG + Chr1:88199457-88199476 None:intergenic 40.0%
GATGCTGACAATGATATGCA+AGG - Chr1:88199195-88199214 MsG0180005185.01.T01:CDS 40.0%
GCAAAGTAGAGTGCGAAATT+TGG + Chr1:88198097-88198116 None:intergenic 40.0%
GCACCCAAAGAACTAATATC+TGG + Chr1:88198589-88198608 None:intergenic 40.0%
GCCTTATCAATGTAAGGTTG+AGG - Chr1:88206613-88206632 MsG0180005185.01.T01:exon 40.0%
GCTGGTAATTCTTGGAAAAC+GGG - Chr1:88198607-88198626 MsG0180005185.01.T01:CDS 40.0%
GGAAGCTTTCAAATAGTCCT+TGG - Chr1:88199229-88199248 MsG0180005185.01.T01:CDS 40.0%
GGCAACCATTCATATTCCAT+AGG + Chr1:88202140-88202159 None:intergenic 40.0%
GGTGAATCAATGCGTATTTG+TGG + Chr1:88206481-88206500 None:intergenic 40.0%
GGTGGCAGAGAAAATGTAAA+TGG - Chr1:88206032-88206051 MsG0180005185.01.T01:exon 40.0%
GTAATGCTGAAATCCCCAAT+TGG - Chr1:88198365-88198384 MsG0180005185.01.T01:exon 40.0%
GTAGCAATCTTCTCAGTTCT+TGG + Chr1:88206227-88206246 None:intergenic 40.0%
GTATCAGTTGGTCGAAATTC+AGG + Chr1:88198412-88198431 None:intergenic 40.0%
GTCAACATCTACACCAAATG+AGG - Chr1:88199143-88199162 MsG0180005185.01.T01:CDS 40.0%
GTCATTGAAAGAGACAACTG+AGG - Chr1:88205458-88205477 MsG0180005185.01.T01:intron 40.0%
GTCTCGACAATTCAACACAT+AGG + Chr1:88200471-88200490 None:intergenic 40.0%
GTTGTTCCATGTCATTCAAG+TGG - Chr1:88206546-88206565 MsG0180005185.01.T01:exon 40.0%
TAACTCCGTCATACATGTAG+TGG + Chr1:88203196-88203215 None:intergenic 40.0%
TAATAACCAGGCCGAAGAAA+GGG - Chr1:88205422-88205441 MsG0180005185.01.T01:intron 40.0%
TACAAGTGGGGAATATGCAA+AGG - Chr1:88205719-88205738 MsG0180005185.01.T01:exon 40.0%
TACTTGAGACTGCACTATGA+AGG + Chr1:88203080-88203099 None:intergenic 40.0%
TAGAAGCTAAATCAGGCAAC+TGG + Chr1:88202765-88202784 None:intergenic 40.0%
TATCATGTAGGATTCAGCCA+CGG - Chr1:88201063-88201082 MsG0180005185.01.T01:intron 40.0%
TCAAAGATTGAGCAGAAAGC+TGG - Chr1:88198460-88198479 MsG0180005185.01.T01:CDS 40.0%
TCTAGGTTAGTACAGAATCC+GGG - Chr1:88201012-88201031 MsG0180005185.01.T01:intron 40.0%
TCTCAAACCGAGAAAAAGAC+GGG - Chr1:88206011-88206030 MsG0180005185.01.T01:exon 40.0%
TCTGGGGATAGTAGTAATGA+TGG - Chr1:88198631-88198650 MsG0180005185.01.T01:CDS 40.0%
TCTTCGGCCTGGTTATTAAT+TGG + Chr1:88205420-88205439 None:intergenic 40.0%
TGCTCAATGCCCAATTCATT+TGG - Chr1:88206845-88206864 MsG0180005185.01.T01:exon 40.0%
TGGCTTCAAAAATGTACTGG+AGG + Chr1:88203845-88203864 None:intergenic 40.0%
TGTTCTAGTGAGGAACCTTT+AGG - Chr1:88201730-88201749 MsG0180005185.01.T01:intron 40.0%
TTAATAACCAGGCCGAAGAA+AGG - Chr1:88205421-88205440 MsG0180005185.01.T01:intron 40.0%
TTATAAGAAGTCCGTGTGAG+AGG - Chr1:88206195-88206214 MsG0180005185.01.T01:exon 40.0%
TTCATGCCAGATGATATTCC+TGG - Chr1:88199294-88199313 MsG0180005185.01.T01:CDS 40.0%
TTGACGCTCTTTCACAATAG+CGG + Chr1:88201646-88201665 None:intergenic 40.0%
TTTCCTAGCAAATGGCCAAT+GGG - Chr1:88199755-88199774 MsG0180005185.01.T01:CDS 40.0%
TTTCTCACTAGAGCCTCTAT+TGG + Chr1:88201679-88201698 None:intergenic 40.0%
! AAGCAGTTTCTTTTCAGCAG+TGG + Chr1:88204863-88204882 None:intergenic 40.0%
! AATTCTTGGAAAACGGGTTC+TGG - Chr1:88198613-88198632 MsG0180005185.01.T01:CDS 40.0%
! AGTTCCTTTTACGCTAGCAT+TGG - Chr1:88204687-88204706 MsG0180005185.01.T01:intron 40.0%
! ATTCTTGGAAAACGGGTTCT+GGG - Chr1:88198614-88198633 MsG0180005185.01.T01:CDS 40.0%
! ATTGCTACAGGCAAAAGTGT+AGG - Chr1:88206239-88206258 MsG0180005185.01.T01:exon 40.0%
! CACTTTGCCAAACTTGCTTA+TGG + Chr1:88198750-88198769 None:intergenic 40.0%
! CCTGATTTAGCTTCTACTTC+TGG - Chr1:88202769-88202788 MsG0180005185.01.T01:intron 40.0%
! CTGGATTTTCCTCCTCATTT+TGG + Chr1:88206274-88206293 None:intergenic 40.0%
! CTTATGCGGCCTTTTAACAT+TGG + Chr1:88206354-88206373 None:intergenic 40.0%
! GAAAATAAAGGCACATGCCA+GGG - Chr1:88204471-88204490 MsG0180005185.01.T01:intron 40.0%
! GAACCTTTAGGAGAAACCAA+CGG - Chr1:88201742-88201761 MsG0180005185.01.T01:intron 40.0%
! GAATCACAACGCACTTTTCT+TGG + Chr1:88199713-88199732 None:intergenic 40.0%
! GATATTAGTTCTTTGGGTGC+TGG - Chr1:88198589-88198608 MsG0180005185.01.T01:CDS 40.0%
! GGAATAACTTGCAGATTCCA+AGG + Chr1:88199249-88199268 None:intergenic 40.0%
! GGAGAAGCCTTATCAATGTA+AGG - Chr1:88206607-88206626 MsG0180005185.01.T01:exon 40.0%
! GGGCCAGATATTAGTTCTTT+GGG - Chr1:88198583-88198602 MsG0180005185.01.T01:CDS 40.0%
! GGTGGTGATGTTGATCAATT+AGG - Chr1:88199492-88199511 MsG0180005185.01.T01:CDS 40.0%
! GTATTCTATTGGTTGGATCC+AGG + Chr1:88203281-88203300 None:intergenic 40.0%
! GTTATCACACTTGCTACCAA+TGG + Chr1:88205268-88205287 None:intergenic 40.0%
! GTTCCTTTTACGCTAGCATT+GGG - Chr1:88204688-88204707 MsG0180005185.01.T01:intron 40.0%
! TAGAGCAAGTTCTTTTCCGT+TGG + Chr1:88201761-88201780 None:intergenic 40.0%
! TGTCACTTCCAAACTGATTC+AGG - Chr1:88202922-88202941 MsG0180005185.01.T01:intron 40.0%
! TGTTTCTCCATTGGTTGTAG+AGG - Chr1:88198846-88198865 MsG0180005185.01.T01:CDS 40.0%
! TTCCTTTTACGCTAGCATTG+GGG - Chr1:88204689-88204708 MsG0180005185.01.T01:intron 40.0%
! TTCTGAACTTGCTTCTGCAA+AGG - Chr1:88203774-88203793 MsG0180005185.01.T01:intron 40.0%
! TTGCTACAGGCAAAAGTGTA+GGG - Chr1:88206240-88206259 MsG0180005185.01.T01:exon 40.0%
! TTGTTTCTCTGTAGCAAGCA+CGG - Chr1:88204918-88204937 MsG0180005185.01.T01:intron 40.0%
! TTTGCCTCTTTTGACAACTC+TGG + Chr1:88201618-88201637 None:intergenic 40.0%
!! AAAGTGATGGATATTGAGGC+AGG + Chr1:88199800-88199819 None:intergenic 40.0%
!! AAATCCCCAATTGGCTTGAA+GGG - Chr1:88198374-88198393 MsG0180005185.01.T01:exon 40.0%
!! ACCCATTACTAGAGTTGATG+AGG - Chr1:88205962-88205981 MsG0180005185.01.T01:exon 40.0%
!! AGGACATTAATAAGGTGCTG+AGG + Chr1:88203349-88203368 None:intergenic 40.0%
!! AGTGAGCCTCTAAGATACAA+AGG + Chr1:88201823-88201842 None:intergenic 40.0%
!! CATCAACTCTAGTAATGGGT+TGG + Chr1:88205962-88205981 None:intergenic 40.0%
!! GGACATTAATAAGGTGCTGA+GGG + Chr1:88203348-88203367 None:intergenic 40.0%
!! GTGAATTCTCTTGGTGGTTT+TGG - Chr1:88199936-88199955 MsG0180005185.01.T01:CDS 40.0%
!! GTGAGCCTCTAAGATACAAA+GGG + Chr1:88201822-88201841 None:intergenic 40.0%
!! GTGTGCTATTTAGACCTGTT+TGG - Chr1:88201192-88201211 MsG0180005185.01.T01:CDS 40.0%
!! GTTTTTGACTGAAATGGACG+AGG - Chr1:88205491-88205510 MsG0180005185.01.T01:intron 40.0%
!! TACTTCTGGAACCTATATGG+CGG - Chr1:88202783-88202802 MsG0180005185.01.T01:intron 40.0%
!! TATCAGATTTTAGCAGGCAC+AGG - Chr1:88206660-88206679 MsG0180005185.01.T01:exon 40.0%
!! TGTTGTTTAGTTGGTTTGCC+TGG - Chr1:88199346-88199365 MsG0180005185.01.T01:CDS 40.0%
!! TTTCCGTTGGTTTCTCCTAA+AGG + Chr1:88201748-88201767 None:intergenic 40.0%
!!! ACTTTTGCCAGAAGCGTTTT+GGG - Chr1:88198811-88198830 MsG0180005185.01.T01:CDS 40.0%
!!! CCAGCTGCTTTGAAACTTTT+GGG - Chr1:88200767-88200786 MsG0180005185.01.T01:intron 40.0%
!!! CCAGTACATTTTTGAAGCCA+CGG - Chr1:88203845-88203864 MsG0180005185.01.T01:intron 40.0%
!!! CTGGCATGTGCCTTTATTTT+CGG + Chr1:88204472-88204491 None:intergenic 40.0%
!!! TAAAGGTTTTAACTGTGGGG+AGG - Chr1:88201925-88201944 MsG0180005185.01.T01:intron 40.0%
!!! TTTTTTGAAGGCTTGGGCAA+TGG + Chr1:88198514-88198533 None:intergenic 40.0%
AACATGGCCTCTACAACCAA+TGG + Chr1:88198856-88198875 None:intergenic 45.0%
AATGGAGAAACATCCTTCGC+CGG + Chr1:88198838-88198857 None:intergenic 45.0%
ACACGATTCTGCATGACTTG+GGG + Chr1:88199094-88199113 None:intergenic 45.0%
ACTACAAGGCAACAGGAAGT+GGG - Chr1:88198673-88198692 MsG0180005185.01.T01:CDS 45.0%
AGAGAGAGAGAGAGATAGAG+CGG + Chr1:88198014-88198033 None:intergenic 45.0%
AGGGGTTGTTCAGAAGTCAA+TGG - Chr1:88198717-88198736 MsG0180005185.01.T01:CDS 45.0%
ATCCCCAATGCTAGCGTAAA+AGG + Chr1:88204694-88204713 None:intergenic 45.0%
ATCGTAGTCATCGAAGGCAA+CGG - Chr1:88198965-88198984 MsG0180005185.01.T01:CDS 45.0%
ATGAAACCAATGATGCTCCC+TGG - Chr1:88201404-88201423 MsG0180005185.01.T01:intron 45.0%
ATGCAGCAAGAACGACAAGT+TGG - Chr1:88205633-88205652 MsG0180005185.01.T01:exon 45.0%
ATTCACAACGAACAGAGCAG+AGG + Chr1:88203539-88203558 None:intergenic 45.0%
CAAGTTATTCCTCGTGCTTC+AGG - Chr1:88199258-88199277 MsG0180005185.01.T01:CDS 45.0%
CAATTCAGGCCGCTTCAAAA+GGG + Chr1:88198563-88198582 None:intergenic 45.0%
CACTCGTTCAATGACTGATC+CGG + Chr1:88203805-88203824 None:intergenic 45.0%
CATTGTGTCCACAAACCACA+GGG - Chr1:88200163-88200182 MsG0180005185.01.T01:CDS 45.0%
CCAATGCTCCTGAATCAGTT+TGG + Chr1:88202933-88202952 None:intergenic 45.0%
CCATATGAGTTTCACCACCA+AGG - Chr1:88206391-88206410 MsG0180005185.01.T01:exon 45.0%
CCATGACCACTTGAATGACA+TGG + Chr1:88206555-88206574 None:intergenic 45.0%
CCATGTCATTCAAGTGGTCA+TGG - Chr1:88206552-88206571 MsG0180005185.01.T01:exon 45.0%
CCCAAAAGTTTCAAAGCAGC+TGG + Chr1:88200770-88200789 None:intergenic 45.0%
CCGTGGCTTCAAAAATGTAC+TGG + Chr1:88203848-88203867 None:intergenic 45.0%
CGTGTTTACTACAAGGCAAC+AGG - Chr1:88198666-88198685 MsG0180005185.01.T01:CDS 45.0%
CTAATATCTGGCCCCAATTC+AGG + Chr1:88198577-88198596 None:intergenic 45.0%
CTGAGGTAGTTGTTGCATCT+GGG - Chr1:88200813-88200832 MsG0180005185.01.T01:intron 45.0%
GATGGATATTGAGGCAGGTA+TGG + Chr1:88199795-88199814 None:intergenic 45.0%
GATTCCTCTCTGAACTCTGT+TGG - Chr1:88203051-88203070 MsG0180005185.01.T01:CDS 45.0%
GCAAGTAAAGCAGTTGCTGA+TGG + Chr1:88202039-88202058 None:intergenic 45.0%
GGAACTCTCTACATCAATCC+AGG - Chr1:88205983-88206002 MsG0180005185.01.T01:exon 45.0%
GTAACCTTTGCCCACATGAA+GGG - Chr1:88206435-88206454 MsG0180005185.01.T01:exon 45.0%
GTAACGCCAGGAATATCATC+TGG + Chr1:88199303-88199322 None:intergenic 45.0%
GTCTCACATCGGATAAGAGA+TGG - Chr1:88200354-88200373 MsG0180005185.01.T01:CDS 45.0%
GTGCCAAGAACACTATTACC+TGG - Chr1:88202559-88202578 MsG0180005185.01.T01:intron 45.0%
TAAGCAACTAACCTGCAGCA+AGG + Chr1:88200842-88200861 None:intergenic 45.0%
TACTACAAGGCAACAGGAAG+TGG - Chr1:88198672-88198691 MsG0180005185.01.T01:CDS 45.0%
TCAGAAACAGAAAGATCCCC+TGG + Chr1:88203760-88203779 None:intergenic 45.0%
TCATCTCATCGAGCAGACAA+TGG + Chr1:88202849-88202868 None:intergenic 45.0%
TCATGCACCATATGCCAAAC+AGG + Chr1:88201209-88201228 None:intergenic 45.0%
TCATTGTGTCCACAAACCAC+AGG - Chr1:88200162-88200181 MsG0180005185.01.T01:CDS 45.0%
TCGTGAAGGTCAGAAGAAAC+TGG + Chr1:88204426-88204445 None:intergenic 45.0%
TCTGGGGATGCAATATCCAT+TGG + Chr1:88204541-88204560 None:intergenic 45.0%
TGAAGCTGCCTTCCAAAACA+TGG + Chr1:88198872-88198891 None:intergenic 45.0%
TGGCGATATTTGCCAGAATC+TGG + Chr1:88202745-88202764 None:intergenic 45.0%
TTAGCTATGCCAAGCCATTG+TGG + Chr1:88201968-88201987 None:intergenic 45.0%
TTCACAACGAACAGAGCAGA+GGG + Chr1:88203538-88203557 None:intergenic 45.0%
TTCATGATCCTCTACATGCC+AGG + Chr1:88199367-88199386 None:intergenic 45.0%
! AGCATCTAAGGGTGCATACT+GGG - Chr1:88206585-88206604 MsG0180005185.01.T01:exon 45.0%
! CCAAACTGATTCAGGAGCAT+TGG - Chr1:88202930-88202949 MsG0180005185.01.T01:intron 45.0%
! CCTCTTTTGACAACTCTGGT+CGG + Chr1:88201614-88201633 None:intergenic 45.0%
! CGAAAATAAAGGCACATGCC+AGG - Chr1:88204470-88204489 MsG0180005185.01.T01:intron 45.0%
! GAACGACAAGTTGGAGAAAG+TGG - Chr1:88205642-88205661 MsG0180005185.01.T01:exon 45.0%
! GCAGAAGCATAAAGCTCTCT+TGG + Chr1:88205579-88205598 None:intergenic 45.0%
! GGGGCCAGATATTAGTTCTT+TGG - Chr1:88198582-88198601 MsG0180005185.01.T01:CDS 45.0%
! TCTCGGTTTGAGAACATTCC+TGG + Chr1:88206004-88206023 None:intergenic 45.0%
! TGCTACAGGCAAAAGTGTAG+GGG - Chr1:88206241-88206260 MsG0180005185.01.T01:exon 45.0%
! TGGTTGTAGAGGCCATGTTT+TGG - Chr1:88198857-88198876 MsG0180005185.01.T01:CDS 45.0%
! TGTGTGGGTTGTGGAATACT+TGG - Chr1:88202955-88202974 MsG0180005185.01.T01:intron 45.0%
! TTCTTGGAAAACGGGTTCTG+GGG - Chr1:88198615-88198634 MsG0180005185.01.T01:CDS 45.0%
!! AATGATATGCAAGGCACTGC+TGG - Chr1:88199204-88199223 MsG0180005185.01.T01:CDS 45.0%
!! ACACTGGCTCATCAAAGACT+TGG - Chr1:88199409-88199428 MsG0180005185.01.T01:CDS 45.0%
!! CCTTGGTGGTGAAACTCATA+TGG + Chr1:88206394-88206413 None:intergenic 45.0%
!! CTAACTTTGGGACTCCACAA+TGG - Chr1:88201951-88201970 MsG0180005185.01.T01:intron 45.0%
!! CTTTGGGTGCTGGTAATTCT+TGG - Chr1:88198599-88198618 MsG0180005185.01.T01:CDS 45.0%
!! GAAATCCCCAATTGGCTTGA+AGG - Chr1:88198373-88198392 MsG0180005185.01.T01:exon 45.0%
!! GCTCCCTGGTAGTGAATTTT+GGG - Chr1:88201418-88201437 MsG0180005185.01.T01:intron 45.0%
!! GGTTTTGGCACTAGACTTAC+TGG - Chr1:88199951-88199970 MsG0180005185.01.T01:CDS 45.0%
!! GTAGTAATGATGGAGTGTCG+CGG - Chr1:88198641-88198660 MsG0180005185.01.T01:CDS 45.0%
!! TAGTAATGATGGAGTGTCGC+GGG - Chr1:88198642-88198661 MsG0180005185.01.T01:CDS 45.0%
!! TCAGGAGCATTGGTTTGTGT+GGG - Chr1:88202940-88202959 MsG0180005185.01.T01:intron 45.0%
!! TGCTCCCTGGTAGTGAATTT+TGG - Chr1:88201417-88201436 MsG0180005185.01.T01:intron 45.0%
!! TGTAGAGGCCATGTTTTGGA+AGG - Chr1:88198861-88198880 MsG0180005185.01.T01:CDS 45.0%
!! TGTGTCAGCTGTTTTGAGTG+CGG - Chr1:88204969-88204988 MsG0180005185.01.T01:intron 45.0%
!! TTCAGGAGCATTGGTTTGTG+TGG - Chr1:88202939-88202958 MsG0180005185.01.T01:intron 45.0%
!! TTCCGTGTCCTTTTAGCTAC+TGG + Chr1:88206293-88206312 None:intergenic 45.0%
!!! ACCTCACAAGCTGGTTTTGT+GGG - Chr1:88200411-88200430 MsG0180005185.01.T01:CDS 45.0%
!!! CTTTTGAAGCGGCCTGAATT+GGG - Chr1:88198562-88198581 MsG0180005185.01.T01:CDS 45.0%
!!! GACTTTTGCCAGAAGCGTTT+TGG - Chr1:88198810-88198829 MsG0180005185.01.T01:CDS 45.0%
!!! GCCAGCTGCTTTGAAACTTT+TGG - Chr1:88200766-88200785 MsG0180005185.01.T01:intron 45.0%
!!! TGGTTTTGTGGGGTTGTGTT+AGG - Chr1:88200422-88200441 MsG0180005185.01.T01:CDS 45.0%
!!! TTTTGAAGCGGCCTGAATTG+GGG - Chr1:88198563-88198582 MsG0180005185.01.T01:CDS 45.0%
ACAGGGCACAGACACTAACA+TGG - Chr1:88200180-88200199 MsG0180005185.01.T01:CDS 50.0%
ACATGAGTCTTCTTCGGGAC+AGG + Chr1:88205901-88205920 None:intergenic 50.0%
AGACCCATTGGCCATTTGCT+AGG + Chr1:88199761-88199780 None:intergenic 50.0%
AGAGCAGAGGGTAAATGGCT+AGG + Chr1:88203526-88203545 None:intergenic 50.0%
AGCAGAGGGTAAATGGCTAG+GGG + Chr1:88203524-88203543 None:intergenic 50.0%
AGCGCGTTCATGAGGATGAT+AGG - Chr1:88206501-88206520 MsG0180005185.01.T01:exon 50.0%
AGGCAGGTATGGATCTGAAC+AGG + Chr1:88199784-88199803 None:intergenic 50.0%
AGGGGACAACAGCCAAAATG+AGG - Chr1:88206259-88206278 MsG0180005185.01.T01:exon 50.0%
AGTAGAACATATCACCGCCG+AGG - Chr1:88197977-88197996 MsG0180005185.01.T01:exon 50.0%
AGTGATTGTGCATTGTCCCG+TGG - Chr1:88205042-88205061 MsG0180005185.01.T01:intron 50.0%
AGTTGGAGAAAGTGGCGAAC+AGG - Chr1:88205650-88205669 MsG0180005185.01.T01:exon 50.0%
ATCATGGGTGAAGTAACGCC+AGG + Chr1:88199315-88199334 None:intergenic 50.0%
ATGTTAGTGTCTGTGCCCTG+TGG + Chr1:88200181-88200200 None:intergenic 50.0%
CAAAACCAGCTTGTGAGGTG+AGG + Chr1:88200410-88200429 None:intergenic 50.0%
CAAACCGAGAAAAAGACGGG+TGG - Chr1:88206014-88206033 MsG0180005185.01.T01:exon 50.0%
CAACTGTAACTCAGCCTTGG+TGG + Chr1:88206408-88206427 None:intergenic 50.0%
CAATGTAAGGTTGAGGGCTG+CGG - Chr1:88206620-88206639 MsG0180005185.01.T01:exon 50.0%
CATTCAAGTGGTCATGGGCT+AGG - Chr1:88206558-88206577 MsG0180005185.01.T01:exon 50.0%
CCAATTCAGGCCGCTTCAAA+AGG + Chr1:88198564-88198583 None:intergenic 50.0%
CCAGATGCAACAACTACCTC+AGG + Chr1:88200815-88200834 None:intergenic 50.0%
CCGACCAGAGTTGTCAAAAG+AGG - Chr1:88201611-88201630 MsG0180005185.01.T01:intron 50.0%
CCTAGAAAGAAACACCGGCA+CGG + Chr1:88200998-88201017 None:intergenic 50.0%
CCTGAGGTAGTTGTTGCATC+TGG - Chr1:88200812-88200831 MsG0180005185.01.T01:intron 50.0%
CCTTGGAGGTCTTGGATGTA+CGG + Chr1:88200598-88200617 None:intergenic 50.0%
CGAACAGAGCAGAGGGTAAA+TGG + Chr1:88203531-88203550 None:intergenic 50.0%
CGTAACCTTTGCCCACATGA+AGG - Chr1:88206434-88206453 MsG0180005185.01.T01:exon 50.0%
CTTGCGAGGAACTGAAGCTT+CGG + Chr1:88206321-88206340 None:intergenic 50.0%
GAAGGCTGTGAAGCCTCATT+TGG + Chr1:88199159-88199178 None:intergenic 50.0%
GAGATGTTGCAGAGCAAAGG+TGG - Chr1:88203901-88203920 MsG0180005185.01.T01:intron 50.0%
GAGCAGAGGGTAAATGGCTA+GGG + Chr1:88203525-88203544 None:intergenic 50.0%
GAGTATGCTAATGACGTGCC+TGG - Chr1:88198910-88198929 MsG0180005185.01.T01:CDS 50.0%
GATCTGAACAGGAGACCCAT+TGG + Chr1:88199773-88199792 None:intergenic 50.0%
GCAACCCTTCAAGCCAATTG+GGG + Chr1:88198381-88198400 None:intergenic 50.0%
GGACAACAGCCAAAATGAGG+AGG - Chr1:88206262-88206281 MsG0180005185.01.T01:exon 50.0%
GGAGTCTTCAAAGCAGAGTC+TGG - Chr1:88205764-88205783 MsG0180005185.01.T01:exon 50.0%
GGCAACCCTTCAAGCCAATT+GGG + Chr1:88198382-88198401 None:intergenic 50.0%
GGCGAAGGATGTTTCTCCAT+TGG - Chr1:88198837-88198856 MsG0180005185.01.T01:CDS 50.0%
GTCATCGAAGGCAACGGAAA+AGG - Chr1:88198971-88198990 MsG0180005185.01.T01:CDS 50.0%
GTGCAACTGTAACTCAGCCT+TGG + Chr1:88206411-88206430 None:intergenic 50.0%
GTGGAGATGTTGCAGAGCAA+AGG - Chr1:88203898-88203917 MsG0180005185.01.T01:intron 50.0%
TAGTGGGAGCTTCAGCATTC+TGG + Chr1:88205107-88205126 None:intergenic 50.0%
TATCATCCTCATGAACGCGC+TGG + Chr1:88206502-88206521 None:intergenic 50.0%
TATCTCTTCTGCAACTGCCC+TGG + Chr1:88204491-88204510 None:intergenic 50.0%
TCGGCGTTTGGAGAATCACA+GGG - Chr1:88198934-88198953 MsG0180005185.01.T01:CDS 50.0%
TCTTACCGCACCCTTCATGT+GGG + Chr1:88206448-88206467 None:intergenic 50.0%
TGAGGCTTCACAGCCTTCTA+AGG - Chr1:88199161-88199180 MsG0180005185.01.T01:CDS 50.0%
TGCTAATGACGTGCCTGGTT+CGG - Chr1:88198915-88198934 MsG0180005185.01.T01:CDS 50.0%
TGCTCCAAGCAGAAAATCCG+TGG + Chr1:88203865-88203884 None:intergenic 50.0%
TGCTTCTGCAAAGGACTTGC+CGG - Chr1:88203783-88203802 MsG0180005185.01.T01:intron 50.0%
TGGCAACCCTTCAAGCCAAT+TGG + Chr1:88198383-88198402 None:intergenic 50.0%
TTCGGCGTTTGGAGAATCAC+AGG - Chr1:88198933-88198952 MsG0180005185.01.T01:CDS 50.0%
TTCTTACCGCACCCTTCATG+TGG + Chr1:88206449-88206468 None:intergenic 50.0%
TTGAAGGCTTGGGCAATGGT+GGG + Chr1:88198510-88198529 None:intergenic 50.0%
TTTGAAGGCTTGGGCAATGG+TGG + Chr1:88198511-88198530 None:intergenic 50.0%
! AAGACTTGGTACTCCGTTCC+TGG - Chr1:88199423-88199442 MsG0180005185.01.T01:CDS 50.0%
! AGTTGCTGATGGGAGAGCAT+AGG + Chr1:88202028-88202047 None:intergenic 50.0%
! GAAGCCACGGATTTTCTGCT+TGG - Chr1:88203858-88203877 MsG0180005185.01.T01:intron 50.0%
! GAGCATCTAAGGGTGCATAC+TGG - Chr1:88206584-88206603 MsG0180005185.01.T01:exon 50.0%
! GATTCTGCATGACTTGGGGA+AGG + Chr1:88199090-88199109 None:intergenic 50.0%
! GCATCTAAGGGTGCATACTG+GGG - Chr1:88206586-88206605 MsG0180005185.01.T01:exon 50.0%
! GGCTAGGACAGAGCATCTAA+GGG - Chr1:88206574-88206593 MsG0180005185.01.T01:exon 50.0%
! TCTGCCACCCGTCTTTTTCT+CGG + Chr1:88206021-88206040 None:intergenic 50.0%
! TTTGGGACTCCACAATGGCT+TGG - Chr1:88201956-88201975 MsG0180005185.01.T01:intron 50.0%
!! ACATGGATGGGCTAGTTGAG+TGG - Chr1:88202230-88202249 MsG0180005185.01.T01:CDS 50.0%
!! ATATGCAAGGCACTGCTGGT+TGG - Chr1:88199208-88199227 MsG0180005185.01.T01:CDS 50.0%
!! CAGATTTTAGCAGGCACAGG+CGG - Chr1:88206663-88206682 MsG0180005185.01.T01:exon 50.0%
!! CATGGATGGGCTAGTTGAGT+GGG - Chr1:88202231-88202250 MsG0180005185.01.T01:CDS 50.0%
!! GCATTGGTTTGTGTGGGTTG+TGG - Chr1:88202946-88202965 MsG0180005185.01.T01:intron 50.0%
!! TCACTACCAGGGAGCATCAT+TGG + Chr1:88201413-88201432 None:intergenic 50.0%
!! TTGGTTTGCCTGGCATGTAG+AGG - Chr1:88199356-88199375 MsG0180005185.01.T01:CDS 50.0%
!!! CACCTCACAAGCTGGTTTTG+TGG - Chr1:88200410-88200429 MsG0180005185.01.T01:CDS 50.0%
!!! CCTCACAAGCTGGTTTTGTG+GGG - Chr1:88200412-88200431 MsG0180005185.01.T01:CDS 50.0%
!!! CCTTTTGAAGCGGCCTGAAT+TGG - Chr1:88198561-88198580 MsG0180005185.01.T01:CDS 50.0%
ACATATCACCGCCGAGGATC+CGG - Chr1:88197983-88198002 MsG0180005185.01.T01:exon 55.0%
ACTGCTCTCGCTACTGTGGA+TGG - Chr1:88205381-88205400 MsG0180005185.01.T01:intron 55.0%
AGGGCTGCGGTCTTTCTTTC+AGG - Chr1:88206633-88206652 MsG0180005185.01.T01:exon 55.0%
ATCCGCACAGAGGGTTATGG+TGG - Chr1:88199474-88199493 MsG0180005185.01.T01:CDS 55.0%
ATGTACGGCCCGTACAGTAC+GGG + Chr1:88200583-88200602 None:intergenic 55.0%
CACCACCATAACCCTCTGTG+CGG + Chr1:88199479-88199498 None:intergenic 55.0%
CCAAACTGCTCTCGCTACTG+TGG - Chr1:88205377-88205396 MsG0180005185.01.T01:intron 55.0%
CCACAGTAGCGAGAGCAGTT+TGG + Chr1:88205380-88205399 None:intergenic 55.0%
CCCCACAAAACCAGCTTGTG+AGG + Chr1:88200415-88200434 None:intergenic 55.0%
CCGTACATCCAAGACCTCCA+AGG - Chr1:88200595-88200614 MsG0180005185.01.T01:CDS 55.0%
CGAAGCTTCAGTTCCTCGCA+AGG - Chr1:88206319-88206338 MsG0180005185.01.T01:exon 55.0%
CTGCTTGGAGCATGCTGTTC+AGG - Chr1:88203873-88203892 MsG0180005185.01.T01:intron 55.0%
CTTTGCCCACATGAAGGGTG+CGG - Chr1:88206440-88206459 MsG0180005185.01.T01:exon 55.0%
GAGAGAGAGAGATAGAGCGG+TGG + Chr1:88198011-88198030 None:intergenic 55.0%
GAGAGATAGAGCGGTGGTTC+CGG + Chr1:88198005-88198024 None:intergenic 55.0%
GAGGAAGTCATCCGCACAGA+GGG - Chr1:88199465-88199484 MsG0180005185.01.T01:CDS 55.0%
GATGTACGGCCCGTACAGTA+CGG + Chr1:88200584-88200603 None:intergenic 55.0%
GATTCACCAGCGCGTTCATG+AGG - Chr1:88206493-88206512 MsG0180005185.01.T01:exon 55.0%
GATTCTCCAAACGCCGAACC+AGG + Chr1:88198931-88198950 None:intergenic 55.0%
GCAATCCTCACCTCACAAGC+TGG - Chr1:88200402-88200421 MsG0180005185.01.T01:CDS 55.0%
GGAGCCAACAGAGTTCAGAG+AGG + Chr1:88203058-88203077 None:intergenic 55.0%
GGTCGAAATTCAGGTGCCAG+TGG + Chr1:88198403-88198422 None:intergenic 55.0%
GTCATCCGCACAGAGGGTTA+TGG - Chr1:88199471-88199490 MsG0180005185.01.T01:CDS 55.0%
GTGGGGAGGCTGCTAACTTT+GGG - Chr1:88201939-88201958 MsG0180005185.01.T01:intron 55.0%
GTTAGTGAGCCTGAAGCACG+AGG + Chr1:88199270-88199289 None:intergenic 55.0%
TGAGGAAGTCATCCGCACAG+AGG - Chr1:88199464-88199483 MsG0180005185.01.T01:CDS 55.0%
TGCTAACCCTTTCTTCGGCC+TGG + Chr1:88205431-88205450 None:intergenic 55.0%
TGTCTGTGCCCTGTGGTTTG+TGG + Chr1:88200174-88200193 None:intergenic 55.0%
TGTGGGGAGGCTGCTAACTT+TGG - Chr1:88201938-88201957 MsG0180005185.01.T01:intron 55.0%
TTGCAGCAGAAGCAGAGCCA+CGG + Chr1:88205062-88205081 None:intergenic 55.0%
! CATCTGGGATTCCTTGCTGC+AGG - Chr1:88200828-88200847 MsG0180005185.01.T01:intron 55.0%
! CCGTGCCGGTGTTTCTTTCT+AGG - Chr1:88200995-88201014 MsG0180005185.01.T01:intron 55.0%
! GGGCTAGGACAGAGCATCTA+AGG - Chr1:88206573-88206592 MsG0180005185.01.T01:exon 55.0%
! TTGGCTTGAAGGGTTGCCAC+TGG - Chr1:88198384-88198403 MsG0180005185.01.T01:CDS 55.0%
!! GATGGGCTAGTTGAGTGGGT+AGG - Chr1:88202235-88202254 MsG0180005185.01.T01:CDS 55.0%
!! GGAGCATGCTGTTCAGGTTG+TGG - Chr1:88203879-88203898 MsG0180005185.01.T01:intron 55.0%
!! GTCACAAGATGATGGGGAGC+TGG - Chr1:88206070-88206089 MsG0180005185.01.T01:exon 55.0%
!! TAGAGGGTGCTGCAGCATGT+TGG - Chr1:88206892-88206911 MsG0180005185.01.T01:exon 55.0%
!!! TGCCAGAAGCGTTTTGGGTC+CGG - Chr1:88198816-88198835 MsG0180005185.01.T01:CDS 55.0%
AGACGAGAACTGCGCACACC+AGG + Chr1:88202580-88202599 None:intergenic 60.0%
AGCAGGCACAGGCGGAAAAC+AGG - Chr1:88206671-88206690 MsG0180005185.01.T01:exon 60.0%
CGAGGAACTGAAGCTTCGGC+AGG + Chr1:88206317-88206336 None:intergenic 60.0%
CGCACCCTTCATGTGGGCAA+AGG + Chr1:88206442-88206461 None:intergenic 60.0%
CGCGGGCCGTGTTTACTACA+AGG - Chr1:88198659-88198678 MsG0180005185.01.T01:CDS 60.0%
CTTGGCCTCAGCCTCTCACA+CGG + Chr1:88206209-88206228 None:intergenic 60.0%
GAAGTCCGTGTGAGAGGCTG+AGG - Chr1:88206201-88206220 MsG0180005185.01.T01:exon 60.0%
TGCAGCAGAAGCAGAGCCAC+GGG + Chr1:88205061-88205080 None:intergenic 60.0%
! GGGTGCTGCAGCATGTTGGT+TGG - Chr1:88206896-88206915 MsG0180005185.01.T01:exon 60.0%
!! AAGCGTTTTGGGTCCGGCGA+AGG - Chr1:88198822-88198841 MsG0180005185.01.T01:CDS 60.0%
CGCCGGACCCAAAACGCTTC+TGG + Chr1:88198821-88198840 None:intergenic 65.0%
GAGCGGTGGTTCCGGATCCT+CGG + Chr1:88197997-88198016 None:intergenic 65.0%
!! GACGTGCCTGGTTCGGCGTT+TGG - Chr1:88198922-88198941 MsG0180005185.01.T01:CDS 65.0%
CGGTGGTTCCGGATCCTCGG+CGG + Chr1:88197994-88198013 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 88197885 88207212 88197885 ID=MsG0180005185.01;
Chr1 mRNA 88197885 88207212 88197885 ID=MsG0180005185.01.T01;Parent=MsG0180005185.01
Chr1 exon 88197885 88200633 88197885 ID=MsG0180005185.01.T01.exon;Parent=MsG0180005185.01.T01
Chr1 CDS 88198379 88200633 88198379 ID=MsG0180005185.01.T01.cds;Parent=MsG0180005185.01.T01
Chr1 CDS 88201145 88201336 88201145 ID=MsG0180005185.01.T01.cds;Parent=MsG0180005185.01.T01
Chr1 exon 88201145 88201336 88201145 ID=MsG0180005185.01.T01.exon;Parent=MsG0180005185.01.T01
Chr1 CDS 88202001 88202539 88202001 ID=MsG0180005185.01.T01.cds;Parent=MsG0180005185.01.T01
Chr1 exon 88202001 88202539 88202001 ID=MsG0180005185.01.T01.exon;Parent=MsG0180005185.01.T01
Chr1 CDS 88203017 88203167 88203017 ID=MsG0180005185.01.T01.cds;Parent=MsG0180005185.01.T01
Chr1 exon 88203017 88203167 88203017 ID=MsG0180005185.01.T01.exon;Parent=MsG0180005185.01.T01
Chr1 CDS 88204013 88204080 88204013 ID=MsG0180005185.01.T01.cds;Parent=MsG0180005185.01.T01
Chr1 exon 88204013 88204080 88204013 ID=MsG0180005185.01.T01.exon;Parent=MsG0180005185.01.T01
Chr1 CDS 88204248 88204326 88204248 ID=MsG0180005185.01.T01.cds;Parent=MsG0180005185.01.T01
Chr1 exon 88204248 88204326 88204248 ID=MsG0180005185.01.T01.exon;Parent=MsG0180005185.01.T01
Chr1 CDS 88205584 88206736 88205584 ID=MsG0180005185.01.T01.cds;Parent=MsG0180005185.01.T01
Chr1 exon 88205584 88207212 88205584 ID=MsG0180005185.01.T01.exon;Parent=MsG0180005185.01.T01
Gene Sequence

>MsG0180005185.01.T01

ATGGGTAATGCTGAAATCCCCAATTGGCTTGAAGGGTTGCCACTGGCACCTGAATTTCGACCAACTGATACTGAATTTTCCGACCCAATTGCTTATATCTCAAAGATTGAGCAGAAAGCTGGTAAATTTGGGATATGTAAGATTATCCCACCATTGCCCAAGCCTTCAAAAAAATATGTTTTTTCTAATTTGAATAAGTCCCTTTTGAAGCGGCCTGAATTGGGGCCAGATATTAGTTCTTTGGGTGCTGGTAATTCTTGGAAAACGGGTTCTGGGGATAGTAGTAATGATGGAGTGTCGCGGGCCGTGTTTACTACAAGGCAACAGGAAGTGGGACAAAATGTCAAAAAAACTAAAGGGGTTGTTCAGAAGTCAATGGCATGTGTCCATAAGCAAGTTTGGCAAAGTGGAGAAGTTTATACAATTGAACAGTTTGAGTCTAAATCGAAGACTTTTGCCAGAAGCGTTTTGGGTCCGGCGAAGGATGTTTCTCCATTGGTTGTAGAGGCCATGTTTTGGAAGGCAGCTTCAGAGAAGCCTATTTATGTGGAGTATGCTAATGACGTGCCTGGTTCGGCGTTTGGAGAATCACAGGGTCAATTTTATCGTAGTCATCGAAGGCAACGGAAAAGGACTGATTATAAGAGTAGGGTAGATAGCTCTGTTTGTAAAGAAACTGAAATGGGTGGTGTAAATGATACACAAAATAATGAGTCTAAAGGCGTTCCTTCCCCAAGTCATGCAGAATCGTGTTTAGAGACGTCTAAATCAGCTTTGACTTTGTCAACATCTACACCAAATGAGGCTTCACAGCCTTCTAAGGAGATGATTTCAGATGCTGACAATGATATGCAAGGCACTGCTGGTTGGAAGCTTTCAAATAGTCCTTGGAATCTGCAAGTTATTCCTCGTGCTTCAGGCTCACTAACACGTTTCATGCCAGATGATATTCCTGGCGTTACTTCACCCATGATATACATTGGTATGTTGTTTAGTTGGTTTGCCTGGCATGTAGAGGATCATGAACTTCACAGCTTGAATTTTCTTCACACTGGCTCATCAAAGACTTGGTACTCCGTTCCTGGAAATTATGCCTTTGCTTTTGAGGAAGTCATCCGCACAGAGGGTTATGGTGGTGATGTTGATCAATTAGCTGCTTTGAAACTTTTGGGCGAAAAAACTACTCTTTTATCACCTGAGGTAGTTGTTGCATCTGGGATTCCTTGCTGCAGGTTAGTACAGAATCCGGGTGAATTTGTTGTGACTTTTCCAAGAGCTTATCATGTAGGATTCAGCCACGGTTTTAACTGTGGGGAGGCTGCTAACTTTGGGACTCCACAATGGCTTGGCATAGCTAAAGAAGCTGCAGTGCGTAGAGCTACAATGAATCATCTTCCTATGCTCTCCCATCAGCAACTGCTTTACTTGCTGACCATGTCTTTTATTTCAAGTGTGCCAAGAACACTATTACCTGGTGTGCGCAGTTCTCGTCTGAGAGACCGTCAGAAAGAAGAAAGAGAGATTCTAGTAAAACAGGCTTTTATAGAAGATATGCTGCACGAAAACAAGCTGCTATCCATTCTTCTTGGAAAAGAAGCTACTAAAGAAGTTGTTTTATGGAATGTTGATTTACTACCAGATTCTGGCAAATATCGCCAGTTGCCTGATTTAGCTTCTACTTCTGGAACCTATATGGCGGACATGTCAAATGATAATATTAGTTCTGCTGATAAGAGTAGCCATTGTCTGCTCGATGAGATGAGTTTGTACATGGAGAATCTGACTGATTCAGATGTTGGCTATGATGATCTTCCATGTCACTTCCAAACTGATTCAGGAGCATTGGTTTGTGTGGGTTGTGGAATACTTGGTTTTCCATTTATGACATTAATACAACCAACTGAGAAATTGATAATGGAACTTCCTGATAATCATCTAGTTGAAGATTCCTCTCTGAACTCTGTTGGCTCCCTTCATAGTGCAGTCTCAAGGGATCTTTCTGTTTCTGAACTTGCTTCTGCAAAGGACTTGCCGGATCAGTCATTGAACGAGTGCAATAAATGTTGGAACACCTCCAGTACATTTTTGAAGCCACGGATTTTCTGCTTGGAGCATGCTGTTCAGGTTGTGGAGATGTTGCAGAGCAAAGGTGGAGCCAATGTGCTTATAATTTGCCATTCAGACTATCCGAAAATAAAGGCACATGCCAGGGCAGTTGCAGAAGAGATACAAAGTGCTTTTGATTATAACGAGGTTCCAATGGATATTGCATCCCCAGAAAATTTGGCTTTGATAGATCTGGCAATTGATGGTAAAGAACTTGATGAATGTGAAGATTGGACATCTAAACTAGGTCTTAATCTGCGGTTTTGTGTCAATAATATAAACAAATCTCCATGTAAACAAGTTCCTTTTACGCTAGCATTGGGGATGCAGTTCTATGATAAACGTCCTGGTTTATCTTTAAATTGGCATTCACAGAAAGCTCGATCTAAAAGGTCAAATCGTTTAGCTCAGTCTAAACCTGACAACATTCAGAGAATGAAGGATGATCAATTGCAGGAAAGAATTGATGGCTCCACTGCTGAAAAGAAACTGCTTCAATATTCAAGGAGAAAATTCAAGCCAAAGCAAAGTTGTTTCTCTGTAGCAAGCACGGTCTGTGAATCCCATGAGAAGTCCAAAAATGTGTCAGCTGTTTTGAGTGCGGAGCATTATCAATTTGTTTCTAAAGATGAGCTTGACACAGACAATTTCAGGAGTGATTGTGCATTGTCCCGTGGCTCTGCTTCTGCTGCAATGACTCCATTGCATAATGAAATCCAGAATGCTGAAGCTCCCACTAGTATGAGTTTGAATACTAGTGTCTCGGAAAAATGCAGCATAGAGAACCAGGATTGTCAGAACAATAAATATTCTGGCTCACTTACAAATGGAATAGACAAAAATGTCGATGTGTTTGGAAACAACCAAATTACTGAAGCCATTGGTAGCAAGTGTGATAACTTAGATTTAGATGGTGAAGGGTATCAAGAACATCAGTCTGCATGCAAAAGCAACAGTGAAGCTGTTTTATCTACTGCTTCATTGGTAAACCAAACTGCTCTCGCTACTGTGGATGGAAGTTTTGAAAGTCCAATTAATAACCAGGCCGAAGAAAGGGTTAGCAATTCTATGTCATTGAAAGAGACAACTGAGGGAGAAAGTAAGTTTTTGACTGAAATGGACGAGGAACCTCTAAATGATGATAAAGAAATGAGTGAACATGCTCCTACTGCAGACGTTTGTGAAATTCCAAGAGAGCTTTATGCTTCTGCAAACTTCCATAATACAGTAAACTTGGATGCTGAGATGCAGCAAGAACGACAAGTTGGAGAAAGTGGCGAACAGGAAATAATTCAGTCCACTCATATTTCCACAAAACAATTGTGTGAATCTACAAGTGGGGAATATGCAAAGGGATTGCACGATGAAGTGATTTTGGAGTCTTCAAAGCAGAGTCTGGTCCAAAACGAGAATATAACTAATGAGGAACATGTATCTAGTTATGTTGCAAAAGGCGACAATAGAAGTATAACCATATCAGAAATAGGATGTTCTGAAGTTTCAGCAGAAACCTGTCCCGAAGAAGACTCATGTATTCAATTTGTTTCGAATACTGAAAAGGAAATGGAAATCCAACCCATTACTAGAGTTGATGAGGAACTCTCTACATCAATCCAGGAATGTTCTCAAACCGAGAAAAAGACGGGTGGCAGAGAAAATGTAAATGGAAGTGAAGTTGATTTGTCACAAGATGATGGGGAGCTGGAAAGCTGTGAGTTGACTACAGAAGTTCCCAGATCAAATACTGGGAAGAAAAAAAAGAGGAAAATGGAAGACACGGAAAAGAACCAATTTGATTGCTATGACTTTATAAGAAGTCCGTGTGAGAGGCTGAGGCCAAGAACTGAGAAGATTGCTACAGGCAAAAGTGTAGGGGACAACAGCCAAAATGAGGAGGAAAATCCAGTAGCTAAAAGGACACGGAAACCTGCCGAAGCTTCAGTTCCTCGCAAGGATAAAAAATCCAATGTTAAAAGGCCGCATAAGTGTGACCTTGATAATTGCCATATGAGTTTCACCACCAAGGCTGAGTTACAGTTGCACAAACGTAACCTTTGCCCACATGAAGGGTGCGGTAAGAAATTCAGTTCCCACAAATACGCATTGATTCACCAGCGCGTTCATGAGGATGATAGGCCCTTTAAATGCACATGGAAAGGTTGTTCCATGTCATTCAAGTGGTCATGGGCTAGGACAGAGCATCTAAGGGTGCATACTGGGGAGAAGCCTTATCAATGTAAGGTTGAGGGCTGCGGTCTTTCTTTCAGGTTCATATCAGATTTTAGCAGGCACAGGCGGAAAACAGGACACTATGTGAAATCTCCTGCTTGA

Protein sequence

>MsG0180005185.01.T01

MGNAEIPNWLEGLPLAPEFRPTDTEFSDPIAYISKIEQKAGKFGICKIIPPLPKPSKKYVFSNLNKSLLKRPELGPDISSLGAGNSWKTGSGDSSNDGVSRAVFTTRQQEVGQNVKKTKGVVQKSMACVHKQVWQSGEVYTIEQFESKSKTFARSVLGPAKDVSPLVVEAMFWKAASEKPIYVEYANDVPGSAFGESQGQFYRSHRRQRKRTDYKSRVDSSVCKETEMGGVNDTQNNESKGVPSPSHAESCLETSKSALTLSTSTPNEASQPSKEMISDADNDMQGTAGWKLSNSPWNLQVIPRASGSLTRFMPDDIPGVTSPMIYIGMLFSWFAWHVEDHELHSLNFLHTGSSKTWYSVPGNYAFAFEEVIRTEGYGGDVDQLAALKLLGEKTTLLSPEVVVASGIPCCRLVQNPGEFVVTFPRAYHVGFSHGFNCGEAANFGTPQWLGIAKEAAVRRATMNHLPMLSHQQLLYLLTMSFISSVPRTLLPGVRSSRLRDRQKEEREILVKQAFIEDMLHENKLLSILLGKEATKEVVLWNVDLLPDSGKYRQLPDLASTSGTYMADMSNDNISSADKSSHCLLDEMSLYMENLTDSDVGYDDLPCHFQTDSGALVCVGCGILGFPFMTLIQPTEKLIMELPDNHLVEDSSLNSVGSLHSAVSRDLSVSELASAKDLPDQSLNECNKCWNTSSTFLKPRIFCLEHAVQVVEMLQSKGGANVLIICHSDYPKIKAHARAVAEEIQSAFDYNEVPMDIASPENLALIDLAIDGKELDECEDWTSKLGLNLRFCVNNINKSPCKQVPFTLALGMQFYDKRPGLSLNWHSQKARSKRSNRLAQSKPDNIQRMKDDQLQERIDGSTAEKKLLQYSRRKFKPKQSCFSVASTVCESHEKSKNVSAVLSAEHYQFVSKDELDTDNFRSDCALSRGSASAAMTPLHNEIQNAEAPTSMSLNTSVSEKCSIENQDCQNNKYSGSLTNGIDKNVDVFGNNQITEAIGSKCDNLDLDGEGYQEHQSACKSNSEAVLSTASLVNQTALATVDGSFESPINNQAEERVSNSMSLKETTEGESKFLTEMDEEPLNDDKEMSEHAPTADVCEIPRELYASANFHNTVNLDAEMQQERQVGESGEQEIIQSTHISTKQLCESTSGEYAKGLHDEVILESSKQSLVQNENITNEEHVSSYVAKGDNRSITISEIGCSEVSAETCPEEDSCIQFVSNTEKEMEIQPITRVDEELSTSIQECSQTEKKTGGRENVNGSEVDLSQDDGELESCELTTEVPRSNTGKKKKRKMEDTEKNQFDCYDFIRSPCERLRPRTEKIATGKSVGDNSQNEEENPVAKRTRKPAEASVPRKDKKSNVKRPHKCDLDNCHMSFTTKAELQLHKRNLCPHEGCGKKFSSHKYALIHQRVHEDDRPFKCTWKGCSMSFKWSWARTEHLRVHTGEKPYQCKVEGCGLSFRFISDFSRHRRKTGHYVKSPA*