AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005608.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005608.01.T01 MTR_1g103710 98.651 519 7 0 1 519 1 519 0.0 1049
MsG0180005608.01.T01 MTR_8g083500 31.681 464 274 8 18 469 21 453 4.63e-60 207
MsG0180005608.01.T01 MTR_4g095080 30.712 534 282 14 35 512 39 540 1.00e-58 204
MsG0180005608.01.T01 MTR_8g010170 28.972 535 305 16 29 513 34 543 7.66e-52 185
MsG0180005608.01.T01 MTR_8g010160 29.499 539 298 15 32 518 37 545 5.49e-50 180
MsG0180005608.01.T01 MTR_5g094400 26.265 514 304 16 17 506 25 487 1.04e-30 126
MsG0180005608.01.T01 MTR_3g056070 24.854 515 294 15 17 506 25 471 7.61e-28 117
MsG0180005608.01.T01 MTR_3g098290 24.242 396 262 13 130 505 155 532 1.27e-12 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005608.01.T01 AT3G22440 68.226 513 148 6 1 507 1 504 0.0 702
MsG0180005608.01.T01 AT4G14900 67.188 512 154 9 1 505 1 505 0.0 684
MsG0180005608.01.T01 AT5G48385 29.412 459 265 12 15 419 22 475 1.74e-43 162
MsG0180005608.01.T01 AT5G16320 26.847 406 247 12 126 518 100 468 3.94e-27 114
MsG0180005608.01.T01 AT1G31814 23.019 530 305 13 2 506 9 460 3.51e-25 108
MsG0180005608.01.T01 AT5G27230 28.175 252 160 7 156 401 567 803 7.08e-16 81.6

Find 181 sgRNAs with CRISPR-Local

Find 225 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTGAATTTCAAATCAAATT+AGG 0.081633 1:-93922332 MsG0180005608.01.T01:five_prime_UTR
TTGCAGCATCTTGTTACTTT+TGG 0.124190 1:-93921520 MsG0180005608.01.T01:CDS
AACAACATTGCGAAAGTAAA+TGG 0.156693 1:+93919969 None:intergenic
AGATGGATGCGTTAGGGTTT+TGG 0.188601 1:-93921885 MsG0180005608.01.T01:CDS
CTGAATTTCAAATCAAATTA+GGG 0.234803 1:-93922331 MsG0180005608.01.T01:five_prime_UTR
TCCACAATCAGCTAGTACTA+TGG 0.272284 1:+93919839 None:intergenic
CCAGCTCGTCCTGCATTATT+AGG 0.277745 1:+93921093 None:intergenic
CTGAGATGCCGGAGGCTTTA+GGG 0.298627 1:-93921819 MsG0180005608.01.T01:CDS
GAAAGTTGCTGCGTCTATAT+TGG 0.308694 1:-93921121 MsG0180005608.01.T01:CDS
CACGATGACGGAGGAGGTTA+AGG 0.309454 1:+93922073 None:intergenic
GATTGTTGATAGTGATGATT+TGG 0.321042 1:-93921497 MsG0180005608.01.T01:CDS
TGACTTCTTGCACCCTCCTT+TGG 0.329951 1:-93922200 MsG0180005608.01.T01:CDS
TTCATTAGTCTGGTTATCTA+AGG 0.331186 1:+93922098 None:intergenic
GCTGAGATGCCGGAGGCTTT+AGG 0.341877 1:-93921820 MsG0180005608.01.T01:CDS
GGATAACTCATGGGTGGTAC+TGG 0.361650 1:+93920102 None:intergenic
TTTACATTATATGTTTATCC+TGG 0.361692 1:-93919732 MsG0180005608.01.T01:three_prime_UTR
AAGGGGAAAAGAAAAGAAAA+AGG 0.378486 1:-93919699 MsG0180005608.01.T01:three_prime_UTR
GCAATAGCTGGTGCTGGCTC+TGG 0.392423 1:+93920135 None:intergenic
TGAGAAATGGAAGGTGAGTT+TGG 0.393095 1:-93921593 MsG0180005608.01.T01:CDS
TGTGTTAGAGTCTCTTGTTC+CGG 0.397728 1:-93921689 MsG0180005608.01.T01:CDS
GGGAAGAAGAAGGAATTAGA+AGG 0.401089 1:-93921850 MsG0180005608.01.T01:CDS
CCTAATAATGCAGGACGAGC+TGG 0.402244 1:-93921093 MsG0180005608.01.T01:CDS
TGCTTCCATACATGTGGGGT+GGG 0.403021 1:+93920181 None:intergenic
CCTTCTCAAATCATACTTGA+AGG 0.403333 1:-93921151 MsG0180005608.01.T01:CDS
GTTTGTGCTTGAAGCTATAT+CGG 0.404227 1:-93921776 MsG0180005608.01.T01:CDS
GTCTTACTTCCTTCTCTGCA+TGG 0.407830 1:-93919893 MsG0180005608.01.T01:three_prime_UTR
TCTTACTTCCTTCTCTGCAT+GGG 0.411002 1:-93919892 MsG0180005608.01.T01:three_prime_UTR
CAAAGGATGTTGCTGAGAAA+TGG 0.423807 1:-93921606 MsG0180005608.01.T01:CDS
TGTAATCACTAACCGTTTAA+CGG 0.431553 1:-93919946 MsG0180005608.01.T01:three_prime_UTR
CGTTGAAAATCATCAAAGCT+TGG 0.432111 1:+93922237 None:intergenic
AGCTTGTTATTGCTTCTGCT+TGG 0.435843 1:-93921462 MsG0180005608.01.T01:CDS
CCTTCCCCACCCCACATGTA+TGG 0.441737 1:-93920186 MsG0180005608.01.T01:CDS
ATTGTTGATAGTGATGATTT+GGG 0.446626 1:-93921496 MsG0180005608.01.T01:CDS
TCGGTTAACTCACCAGGATC+GGG 0.448361 1:+93922270 None:intergenic
GGAGGGTGCAAGAAGTCATA+AGG 0.450759 1:+93922205 None:intergenic
GGATACGGTGGAAGAGCAGC+TGG 0.452505 1:+93920207 None:intergenic
GGTTAAGGGATTCATTAGTC+TGG 0.452846 1:+93922088 None:intergenic
GGTGATGGTGAGGTTGATAA+TGG 0.453548 1:-93921946 MsG0180005608.01.T01:CDS
CGCTTCTTCAGACTCTCGGC+AGG 0.455239 1:+93920423 None:intergenic
TGGTGGCTATGGAAATGTTT+TGG 0.457641 1:-93920073 MsG0180005608.01.T01:CDS
TGTTTGAAGATGGATGCGTT+AGG 0.459922 1:-93921892 MsG0180005608.01.T01:CDS
GTTTGAAGATGGATGCGTTA+GGG 0.461120 1:-93921891 MsG0180005608.01.T01:CDS
AAGTGGAAATGATCTTGGTT+GGG 0.461197 1:-93921722 MsG0180005608.01.T01:CDS
CTCGGTTAACTCACCAGGAT+CGG 0.464056 1:+93922269 None:intergenic
TTGTTATTGCTTCTGCTTGG+AGG 0.465459 1:-93921459 MsG0180005608.01.T01:CDS
TGCAAGAATGTATGAACATC+AGG 0.469620 1:+93921538 None:intergenic
GTAGAGTTTCTGATGTTTCA+CGG 0.470784 1:+93919801 None:intergenic
CCATACATGTGGGGTGGGGA+AGG 0.470994 1:+93920186 None:intergenic
CTAATAATGCAGGACGAGCT+GGG 0.471588 1:-93921092 MsG0180005608.01.T01:CDS
TATGATTTGAGAAGGGGAAC+AGG 0.472520 1:+93921159 None:intergenic
ACGATGACGGAGGAGGTTAA+GGG 0.473990 1:+93922074 None:intergenic
CTAACAAATGTAGGTGCGGC+AGG 0.474410 1:+93920252 None:intergenic
AACATCCTCGACTTCAACAC+CGG 0.478447 1:+93921655 None:intergenic
GTCAAACGTCCAGCTTTAGC+AGG 0.481681 1:+93920297 None:intergenic
TATCCTGCATATGGTGGCTA+TGG 0.483740 1:-93920084 MsG0180005608.01.T01:CDS
GACTTCTGCTTCCATACATG+TGG 0.486168 1:+93920175 None:intergenic
AAGTCGCTTCTTCAGACTCT+CGG 0.486207 1:+93920419 None:intergenic
CCCATGAGTTATCCTGCATA+TGG 0.486599 1:-93920093 MsG0180005608.01.T01:CDS
AAAGTGGAAATGATCTTGGT+TGG 0.487209 1:-93921723 MsG0180005608.01.T01:CDS
AGAGTCTCTTGTTCCGGTGA+TGG 0.488330 1:-93921683 MsG0180005608.01.T01:CDS
CCGATAGAAATGACTACACT+TGG 0.490432 1:-93920025 MsG0180005608.01.T01:exon
TTACATTATATGTTTATCCT+GGG 0.492067 1:-93919731 MsG0180005608.01.T01:three_prime_UTR
CTGCTTCCATACATGTGGGG+TGG 0.492672 1:+93920180 None:intergenic
GACGCTGCAATAGCTGGTGC+TGG 0.492973 1:+93920129 None:intergenic
ACAGTATCTAGCTGCAAGAA+AGG 0.493366 1:-93920508 MsG0180005608.01.T01:intron
ACAACATTGCGAAAGTAAAT+GGG 0.495657 1:+93919970 None:intergenic
GATAAAAGTGGAAATGATCT+TGG 0.496120 1:-93921727 MsG0180005608.01.T01:CDS
TTCCCCTTCAGTACGATCCC+AGG 0.496666 1:+93919714 None:intergenic
CCTAAGCTTGCACTTTCACT+CGG 0.497107 1:-93921427 MsG0180005608.01.T01:CDS
AGGTTTAAGAGCTGAGATGC+CGG 0.498861 1:-93921830 MsG0180005608.01.T01:CDS
CCAGCTTTAGCAGGTGGCAT+TGG 0.499867 1:+93920306 None:intergenic
GTTCATTTCACATTTGAAGT+GGG 0.500021 1:-93921201 MsG0180005608.01.T01:CDS
ACAGAACTGCTACCGTTAAA+CGG 0.503983 1:+93919934 None:intergenic
GCTTCCATACATGTGGGGTG+GGG 0.504248 1:+93920182 None:intergenic
CACATTTGAAGTGGGTCTTG+TGG 0.505791 1:-93921193 MsG0180005608.01.T01:CDS
AGTGAAAGATGAAAGAGTAA+AGG 0.506257 1:+93922383 None:intergenic
ATGGGGTCAATCCCCGATCC+TGG 0.508410 1:-93922282 MsG0180005608.01.T01:CDS
GATAAGAGAGGTGATAAAAG+TGG 0.510862 1:-93921739 MsG0180005608.01.T01:CDS
TTATCACCTCTCTTATCCAC+CGG 0.511842 1:+93921745 None:intergenic
CCAATGCCACCTGCTAAAGC+TGG 0.512458 1:-93920306 MsG0180005608.01.T01:CDS
ATGTGGGGTGGGGAAGGATA+CGG 0.514411 1:+93920192 None:intergenic
CCACAATCAGCTAGTACTAT+GGG 0.514634 1:+93919840 None:intergenic
TGTTCCGGTGATGGTGGACC+CGG 0.514680 1:-93921674 MsG0180005608.01.T01:CDS
CTTCAAGTATGATTTGAGAA+GGG 0.514827 1:+93921152 None:intergenic
GAAGAAGCGACTTGAACAGC+TGG 0.515603 1:-93920409 MsG0180005608.01.T01:CDS
CTGAAGCGCGTCGTCGAGCG+TGG 0.520519 1:+93922047 None:intergenic
CTTACTTCCTTCTCTGCATG+GGG 0.522476 1:-93919891 MsG0180005608.01.T01:three_prime_UTR
TATGTTATAAAACTCTATGA+AGG 0.522822 1:-93919664 MsG0180005608.01.T01:three_prime_UTR
GAAACTCTACTACCACTGTT+CGG 0.523940 1:-93919788 MsG0180005608.01.T01:three_prime_UTR
AAAGGAGCAGTCTGCACTCA+AGG 0.526020 1:-93920490 MsG0180005608.01.T01:CDS
CCGAGTGAAAGTGCAAGCTT+AGG 0.528254 1:+93921427 None:intergenic
GGGTATGACGCTGCAATAGC+TGG 0.529257 1:+93920123 None:intergenic
ATACATTCCCCTAAAGCCTC+CGG 0.530835 1:+93921811 None:intergenic
TTTAGGGGAATGTATAGATC+CGG 0.533299 1:-93921803 MsG0180005608.01.T01:CDS
GAGGGTGCAAGAAGTCATAA+GGG 0.534156 1:+93922206 None:intergenic
TGCGAAAGTAAATGGGATCA+AGG 0.536547 1:+93919977 None:intergenic
GTCTCTTGTTCCGGTGATGG+TGG 0.536880 1:-93921680 MsG0180005608.01.T01:CDS
TGGGGTGGGGAAGGATACGG+TGG 0.537310 1:+93920195 None:intergenic
TAGTAAGCTTGCTGATAAGT+AGG 0.538590 1:+93920048 None:intergenic
TTCTTCGATGCATTTAATCA+CGG 0.539345 1:+93920467 None:intergenic
GAAAGATGAAAGAGTAAAGG+TGG 0.540843 1:+93922386 None:intergenic
CCTTCAAGTATGATTTGAGA+AGG 0.541182 1:+93921151 None:intergenic
TTTCCATAGCCACCATATGC+AGG 0.543685 1:+93920081 None:intergenic
TTGGAAGATCCTAATAATGC+AGG 0.546277 1:-93921102 MsG0180005608.01.T01:CDS
CAGAGAGTTCTTTCCAAAGG+AGG 0.547537 1:+93922187 None:intergenic
ACCATATGCAGGATAACTCA+TGG 0.548302 1:+93920092 None:intergenic
CCAAGTGTAGTCATTTCTAT+CGG 0.551619 1:+93920025 None:intergenic
AACACCGGGTCCACCATCAC+CGG 0.552746 1:+93921670 None:intergenic
TACTTCCTTCTCTGCATGGG+GGG 0.557466 1:-93919889 MsG0180005608.01.T01:three_prime_UTR
TTCAAGTATGATTTGAGAAG+GGG 0.557656 1:+93921153 None:intergenic
AAATGACTACACTTGGAAGA+TGG 0.557880 1:-93920018 MsG0180005608.01.T01:three_prime_UTR
TGGATTCACGATGACGGAGG+AGG 0.558868 1:+93922067 None:intergenic
TGTTCATTTCACATTTGAAG+TGG 0.561657 1:-93921202 MsG0180005608.01.T01:CDS
CAGCGAGAGCAGCTTCAGTA+CGG 0.564465 1:+93922001 None:intergenic
GATAACTCATGGGTGGTACT+GGG 0.565311 1:+93920103 None:intergenic
AGAAGGTTAAGCCTGAGAAA+AGG 0.566687 1:-93920386 MsG0180005608.01.T01:CDS
CCCATAGTACTAGCTGATTG+TGG 0.567010 1:-93919840 MsG0180005608.01.T01:three_prime_UTR
TTATCCTGGGATCGTACTGA+AGG 0.568186 1:-93919718 MsG0180005608.01.T01:three_prime_UTR
TGAGATGCCGGAGGCTTTAG+GGG 0.570997 1:-93921818 MsG0180005608.01.T01:CDS
GCTGGGTATTGCCCGTGTGA+TGG 0.573093 1:+93920225 None:intergenic
ATTGAAGAGTTGATCAGCAA+GGG 0.574282 1:-93921240 MsG0180005608.01.T01:CDS
GATGGAGATCTAACAAATGT+AGG 0.574362 1:+93920243 None:intergenic
GCTGATTGTGGAAAGTAACT+AGG 0.576264 1:-93919828 MsG0180005608.01.T01:three_prime_UTR
GATTTGAGAAGGGGAACAGG+TGG 0.579667 1:+93921162 None:intergenic
GTGATGATTTGGGATTGTAT+CGG 0.580288 1:-93921486 MsG0180005608.01.T01:CDS
ACACGAGCAAGCAACAGCAA+TGG 0.581543 1:-93920333 MsG0180005608.01.T01:CDS
TTTGCAAGTTTCTTCACAGT+AGG 0.584657 1:+93921625 None:intergenic
GTTAACTCGGTTAACTCACC+AGG 0.587379 1:+93922264 None:intergenic
AGAGAGTTCTTTCCAAAGGA+GGG 0.588382 1:+93922188 None:intergenic
TTTCTTCTTCTTTCACTATG+GGG 0.589278 1:-93922299 MsG0180005608.01.T01:exon
GATCAGAGAGTTCTTTCCAA+AGG 0.590449 1:+93922184 None:intergenic
GCGACTTGAACAGCTGGAGA+AGG 0.592613 1:-93920403 MsG0180005608.01.T01:CDS
AAAGCTTGGTTGAGTTAACT+CGG 0.594292 1:+93922251 None:intergenic
ACTTCTGCTTCCATACATGT+GGG 0.597100 1:+93920176 None:intergenic
CGGCAGGGAATTCAGCCTCA+AGG 0.598316 1:+93920439 None:intergenic
TACTGTGAAGAAACTTGCAA+AGG 0.598819 1:-93921623 MsG0180005608.01.T01:CDS
TATCCTGGGATCGTACTGAA+GGG 0.600436 1:-93919717 MsG0180005608.01.T01:three_prime_UTR
CGAGCAAGCAACAGCAATGG+AGG 0.601232 1:-93920330 MsG0180005608.01.T01:CDS
GCTTCAAGCACAAACTTCGC+CGG 0.602099 1:+93921784 None:intergenic
TGCACTCTCTCGTGTACGAG+AGG 0.605693 1:-93921980 MsG0180005608.01.T01:CDS
ATGAGTTATCCTGCATATGG+TGG 0.621655 1:-93920090 MsG0180005608.01.T01:CDS
CCATATGCAGGATAACTCAT+GGG 0.621849 1:+93920093 None:intergenic
GGTGAGGTTGATAATGGTGA+AGG 0.624000 1:-93921940 MsG0180005608.01.T01:CDS
TTACTTCCTTCTCTGCATGG+GGG 0.624661 1:-93919890 MsG0180005608.01.T01:three_prime_UTR
TCTGGTGAATAAGCATAGGA+TGG 0.626422 1:+93920153 None:intergenic
GAAATGGAAGGTGAGTTTGG+AGG 0.626970 1:-93921590 MsG0180005608.01.T01:CDS
GGTCTCGAGAATCAAATGCC+CGG 0.630188 1:-93921406 MsG0180005608.01.T01:intron
TAATAATGCAGGACGAGCTG+GGG 0.634550 1:-93921091 MsG0180005608.01.T01:intron
TAACAAATGTAGGTGCGGCA+GGG 0.638187 1:+93920253 None:intergenic
ATCCTGGGATCGTACTGAAG+GGG 0.638610 1:-93919716 MsG0180005608.01.T01:three_prime_UTR
TGTTGAGGATGGTGATGGTG+AGG 0.638699 1:-93921956 MsG0180005608.01.T01:CDS
TGTGCTTGAAGCTATATCGG+AGG 0.640938 1:-93921773 MsG0180005608.01.T01:CDS
AGATGAAAGAGTAAAGGTGG+TGG 0.641008 1:+93922389 None:intergenic
GAGGATGTTGAGGATGGTGA+TGG 0.643271 1:-93921961 MsG0180005608.01.T01:CDS
ACATCCTCGACTTCAACACC+GGG 0.649889 1:+93921656 None:intergenic
AAACGTCCAGCTTTAGCAGG+TGG 0.652642 1:+93920300 None:intergenic
GATTGAAGAGTTGATCAGCA+AGG 0.652823 1:-93921241 MsG0180005608.01.T01:CDS
GATACGGTGGAAGAGCAGCT+GGG 0.653859 1:+93920208 None:intergenic
ATTTGAGAAGGGGAACAGGT+GGG 0.655380 1:+93921163 None:intergenic
CGGTTAACTCACCAGGATCG+GGG 0.656580 1:+93922271 None:intergenic
TTTGTTAGATCTCCATCACA+CGG 0.656935 1:-93920237 MsG0180005608.01.T01:CDS
TCGTGTACGAGAGGATGTTG+AGG 0.657229 1:-93921971 MsG0180005608.01.T01:CDS
CTTCTGCTTCCATACATGTG+GGG 0.658463 1:+93920177 None:intergenic
GGTGTTGAAGTCGAGGATGT+TGG 0.663319 1:-93921653 MsG0180005608.01.T01:CDS
GCTTCTTCAGACTCTCGGCA+GGG 0.664485 1:+93920424 None:intergenic
CGAGCGTGGATTCACGATGA+CGG 0.664625 1:+93922061 None:intergenic
AGATCTAACAAATGTAGGTG+CGG 0.668009 1:+93920248 None:intergenic
TGGCTCTGGTGAATAAGCAT+AGG 0.674714 1:+93920149 None:intergenic
TGGACCCGGTGTTGAAGTCG+AGG 0.675343 1:-93921660 MsG0180005608.01.T01:CDS
TTTAAGAGCTGAGATGCCGG+AGG 0.680286 1:-93921827 MsG0180005608.01.T01:CDS
ATTGTGGAAAGTAACTAGGA+CGG 0.681195 1:-93919824 MsG0180005608.01.T01:three_prime_UTR
TTGTTAGATCTCCATCACAC+GGG 0.683375 1:-93920236 MsG0180005608.01.T01:CDS
GTACGAGAGGATGTTGAGGA+TGG 0.688271 1:-93921967 MsG0180005608.01.T01:CDS
GTGAGTTTGGAGGAACGTGG+TGG 0.702665 1:-93921580 MsG0180005608.01.T01:CDS
CATCGAAGAATACAACCTTG+AGG 0.703394 1:-93920454 MsG0180005608.01.T01:CDS
GGATGTTGCTGAGAAATGGA+AGG 0.712685 1:-93921602 MsG0180005608.01.T01:CDS
GCGTGGATTCACGATGACGG+AGG 0.713293 1:+93922064 None:intergenic
TATGCAGGATAACTCATGGG+TGG 0.725411 1:+93920096 None:intergenic
AAGGTGAGTTTGGAGGAACG+TGG 0.728174 1:-93921583 MsG0180005608.01.T01:CDS
GGTGCAAGAAGTCATAAGGG+AGG 0.729779 1:+93922209 None:intergenic
TCTACAACTAAACCGAACAG+TGG 0.731372 1:+93919776 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACCATAGATATAAAATTTC+TGG + Chr1:93921214-93921233 None:intergenic 20.0%
!! ATCAAATATGTTAAATGTTG+TGG - Chr1:93921037-93921056 MsG0180005608.01.T01:intron 20.0%
!! CTGAATTTCAAATCAAATTA+GGG - Chr1:93919702-93919721 MsG0180005608.01.T01:three_prime_UTR 20.0%
!! GATTGTTAAAATTATCCTTT+AGG - Chr1:93921308-93921327 MsG0180005608.01.T01:intron 20.0%
!! TAAAAATGTCATGAATTTAC+CGG + Chr1:93920649-93920668 None:intergenic 20.0%
!! TATGTTATAAAACTCTATGA+AGG - Chr1:93922369-93922388 MsG0180005608.01.T01:five_prime_UTR 20.0%
!! TCTGAATTTCAAATCAAATT+AGG - Chr1:93919701-93919720 MsG0180005608.01.T01:three_prime_UTR 20.0%
!! TTACATTATATGTTTATCCT+GGG - Chr1:93922302-93922321 MsG0180005608.01.T01:exon 20.0%
!! TTTACATTATATGTTTATCC+TGG - Chr1:93922301-93922320 MsG0180005608.01.T01:exon 20.0%
!! TTTCTTGACTTATTACAAAT+GGG - Chr1:93921460-93921479 MsG0180005608.01.T01:CDS 20.0%
!!! ATTAGTCTTTGTTTATTTGT+TGG - Chr1:93920720-93920739 MsG0180005608.01.T01:intron 20.0%
!!! TGTTGTTTGTTTTTATTAGT+TGG - Chr1:93921398-93921417 MsG0180005608.01.T01:intron 20.0%
!!! TTAGTCTTTGTTTATTTGTT+GGG - Chr1:93920721-93920740 MsG0180005608.01.T01:intron 20.0%
!!! TTTTCTTGACTTATTACAAA+TGG - Chr1:93921459-93921478 MsG0180005608.01.T01:CDS 20.0%
! AAAAATGTCATGAATTTACC+GGG + Chr1:93920648-93920667 None:intergenic 25.0%
! AATTTGTAAATGTAGCCTAA+AGG + Chr1:93921326-93921345 None:intergenic 25.0%
! ATTAGTTGGAAGAAAAAAGT+CGG - Chr1:93921412-93921431 MsG0180005608.01.T01:CDS 25.0%
! TAGAGATATGTTAGAGATAA+GGG - Chr1:93921281-93921300 MsG0180005608.01.T01:intron 25.0%
! TTAGAGATATGTTAGAGATA+AGG - Chr1:93921280-93921299 MsG0180005608.01.T01:intron 25.0%
! TTCTTGACTTATTACAAATG+GGG - Chr1:93921461-93921480 MsG0180005608.01.T01:CDS 25.0%
!! ATTTTCTTCTTCTTTCACTA+TGG - Chr1:93919732-93919751 MsG0180005608.01.T01:three_prime_UTR 25.0%
!! GTCCAGAAATTTTATATCTA+TGG - Chr1:93921209-93921228 MsG0180005608.01.T01:CDS 25.0%
!! TTTTCTTCTTCTTTCACTAT+GGG - Chr1:93919733-93919752 MsG0180005608.01.T01:three_prime_UTR 25.0%
!!! ATTGTTGATAGTGATGATTT+GGG - Chr1:93920537-93920556 MsG0180005608.01.T01:intron 25.0%
AACAACATTGCGAAAGTAAA+TGG + Chr1:93922067-93922086 None:intergenic 30.0%
AAGGGGAAAAGAAAAGAAAA+AGG - Chr1:93922334-93922353 MsG0180005608.01.T01:five_prime_UTR 30.0%
ACAACATTGCGAAAGTAAAT+GGG + Chr1:93922066-93922085 None:intergenic 30.0%
AGTGAAAGATGAAAGAGTAA+AGG + Chr1:93919653-93919672 None:intergenic 30.0%
CTTCAAGTATGATTTGAGAA+GGG + Chr1:93920884-93920903 None:intergenic 30.0%
GATAAAAGTGGAAATGATCT+TGG - Chr1:93920306-93920325 MsG0180005608.01.T01:CDS 30.0%
TCACTGCCAATTTCATATTT+CGG - Chr1:93921117-93921136 MsG0180005608.01.T01:CDS 30.0%
TGTAATCACTAACCGTTTAA+CGG - Chr1:93922087-93922106 MsG0180005608.01.T01:CDS 30.0%
TGTTCATTTCACATTTGAAG+TGG - Chr1:93920831-93920850 MsG0180005608.01.T01:intron 30.0%
TTCAAGTATGATTTGAGAAG+GGG + Chr1:93920883-93920902 None:intergenic 30.0%
TTCTTCGATGCATTTAATCA+CGG + Chr1:93921569-93921588 None:intergenic 30.0%
TTTCTTCTTCTTTCACTATG+GGG - Chr1:93919734-93919753 MsG0180005608.01.T01:three_prime_UTR 30.0%
! AATTAAGCTGTCTTTTATGC+TGG - Chr1:93921066-93921085 MsG0180005608.01.T01:intron 30.0%
! GTTCATTTCACATTTGAAGT+GGG - Chr1:93920832-93920851 MsG0180005608.01.T01:intron 30.0%
! TTCATTAGTCTGGTTATCTA+AGG + Chr1:93919938-93919957 None:intergenic 30.0%
!! GATTGTTGATAGTGATGATT+TGG - Chr1:93920536-93920555 MsG0180005608.01.T01:intron 30.0%
!!! AAAGTCGTTTTGTTTGAAGA+TGG - Chr1:93920131-93920150 MsG0180005608.01.T01:CDS 30.0%
AAAGCTTGGTTGAGTTAACT+CGG + Chr1:93919785-93919804 None:intergenic 35.0%
AAAGTGGAAATGATCTTGGT+TGG - Chr1:93920310-93920329 MsG0180005608.01.T01:CDS 35.0%
AAATGACTACACTTGGAAGA+TGG - Chr1:93922015-93922034 MsG0180005608.01.T01:CDS 35.0%
AAGTGGAAATGATCTTGGTT+GGG - Chr1:93920311-93920330 MsG0180005608.01.T01:CDS 35.0%
AGATCTAACAAATGTAGGTG+CGG + Chr1:93921788-93921807 None:intergenic 35.0%
ATTGTGGAAAGTAACTAGGA+CGG - Chr1:93922209-93922228 MsG0180005608.01.T01:CDS 35.0%
ATTTCATATTTCGGCATGCA+TGG - Chr1:93921126-93921145 MsG0180005608.01.T01:CDS 35.0%
CCAAGTGTAGTCATTTCTAT+CGG + Chr1:93922011-93922030 None:intergenic 35.0%
CCTTCAAGTATGATTTGAGA+AGG + Chr1:93920885-93920904 None:intergenic 35.0%
CCTTCTCAAATCATACTTGA+AGG - Chr1:93920882-93920901 MsG0180005608.01.T01:intron 35.0%
CGTTGAAAATCATCAAAGCT+TGG + Chr1:93919799-93919818 None:intergenic 35.0%
GAAAGATGAAAGAGTAAAGG+TGG + Chr1:93919650-93919669 None:intergenic 35.0%
GAACACATGATCCTATATCA+AGG + Chr1:93921160-93921179 None:intergenic 35.0%
GATAAGAGAGGTGATAAAAG+TGG - Chr1:93920294-93920313 MsG0180005608.01.T01:CDS 35.0%
GATGGAGATCTAACAAATGT+AGG + Chr1:93921793-93921812 None:intergenic 35.0%
GTAGAGTTTCTGATGTTTCA+CGG + Chr1:93922235-93922254 None:intergenic 35.0%
GTTTGTGCTTGAAGCTATAT+CGG - Chr1:93920257-93920276 MsG0180005608.01.T01:CDS 35.0%
TACTGTGAAGAAACTTGCAA+AGG - Chr1:93920410-93920429 MsG0180005608.01.T01:CDS 35.0%
TGCAAGAATGTATGAACATC+AGG + Chr1:93920498-93920517 None:intergenic 35.0%
TGCATGCCGAAATATGAAAT+TGG + Chr1:93921126-93921145 None:intergenic 35.0%
TTGGAAGATCCTAATAATGC+AGG - Chr1:93920931-93920950 MsG0180005608.01.T01:intron 35.0%
TTGTATAGAGTATGCAGCTT+AGG - Chr1:93921237-93921256 MsG0180005608.01.T01:CDS 35.0%
TTTAGGGGAATGTATAGATC+CGG - Chr1:93920230-93920249 MsG0180005608.01.T01:CDS 35.0%
TTTGCAAGTTTCTTCACAGT+AGG + Chr1:93920411-93920430 None:intergenic 35.0%
TTTGTTAGATCTCCATCACA+CGG - Chr1:93921796-93921815 MsG0180005608.01.T01:CDS 35.0%
! ATTGAAGAGTTGATCAGCAA+GGG - Chr1:93920793-93920812 MsG0180005608.01.T01:intron 35.0%
! GTGATGATTTGGGATTGTAT+CGG - Chr1:93920547-93920566 MsG0180005608.01.T01:intron 35.0%
! TATCTAAGGAGCGAATTTTG+CGG + Chr1:93919924-93919943 None:intergenic 35.0%
! TTTTGTGATAGGGAAGAAGA+AGG - Chr1:93920173-93920192 MsG0180005608.01.T01:CDS 35.0%
!! TAGTAAGCTTGCTGATAAGT+AGG + Chr1:93921988-93922007 None:intergenic 35.0%
!! TGGTATTGGTACCTTGATAT+AGG - Chr1:93921146-93921165 MsG0180005608.01.T01:CDS 35.0%
!!! TGCAGCATCTTGTTACTTTT+GGG - Chr1:93920514-93920533 MsG0180005608.01.T01:intron 35.0%
!!! TTGCAGCATCTTGTTACTTT+TGG - Chr1:93920513-93920532 MsG0180005608.01.T01:intron 35.0%
ACAGAACTGCTACCGTTAAA+CGG + Chr1:93922102-93922121 None:intergenic 40.0%
ACAGTATCTAGCTGCAAGAA+AGG - Chr1:93921525-93921544 MsG0180005608.01.T01:CDS 40.0%
ACCATATGCAGGATAACTCA+TGG + Chr1:93921944-93921963 None:intergenic 40.0%
ACTTCTGCTTCCATACATGT+GGG + Chr1:93921860-93921879 None:intergenic 40.0%
AGAAGGTTAAGCCTGAGAAA+AGG - Chr1:93921647-93921666 MsG0180005608.01.T01:CDS 40.0%
AGAGAGTTCTTTCCAAAGGA+GGG + Chr1:93919848-93919867 None:intergenic 40.0%
ATAGAGTATGCAGCTTAGGA+AGG - Chr1:93921241-93921260 MsG0180005608.01.T01:CDS 40.0%
ATGAGTTATCCTGCATATGG+TGG - Chr1:93921943-93921962 MsG0180005608.01.T01:CDS 40.0%
CAAAGGATGTTGCTGAGAAA+TGG - Chr1:93920427-93920446 MsG0180005608.01.T01:CDS 40.0%
CATCGAAGAATACAACCTTG+AGG - Chr1:93921579-93921598 MsG0180005608.01.T01:CDS 40.0%
CCACAATCAGCTAGTACTAT+GGG + Chr1:93922196-93922215 None:intergenic 40.0%
CCATATGCAGGATAACTCAT+GGG + Chr1:93921943-93921962 None:intergenic 40.0%
CCGATAGAAATGACTACACT+TGG - Chr1:93922008-93922027 MsG0180005608.01.T01:CDS 40.0%
GAAACTCTACTACCACTGTT+CGG - Chr1:93922245-93922264 MsG0180005608.01.T01:CDS 40.0%
GAAAGTTGCTGCGTCTATAT+TGG - Chr1:93920912-93920931 MsG0180005608.01.T01:intron 40.0%
GATCAGAGAGTTCTTTCCAA+AGG + Chr1:93919852-93919871 None:intergenic 40.0%
GCTGATTGTGGAAAGTAACT+AGG - Chr1:93922205-93922224 MsG0180005608.01.T01:CDS 40.0%
GGGAAGAAGAAGGAATTAGA+AGG - Chr1:93920183-93920202 MsG0180005608.01.T01:CDS 40.0%
GGTTAAGGGATTCATTAGTC+TGG + Chr1:93919948-93919967 None:intergenic 40.0%
GTTTGAAGATGGATGCGTTA+GGG - Chr1:93920142-93920161 MsG0180005608.01.T01:CDS 40.0%
TATGATTTGAGAAGGGGAAC+AGG + Chr1:93920877-93920896 None:intergenic 40.0%
TATTTCGGCATGCATGGTAT+TGG - Chr1:93921132-93921151 MsG0180005608.01.T01:CDS 40.0%
TCCACAATCAGCTAGTACTA+TGG + Chr1:93922197-93922216 None:intergenic 40.0%
TCTACAACTAAACCGAACAG+TGG + Chr1:93922260-93922279 None:intergenic 40.0%
TCTGGTGAATAAGCATAGGA+TGG + Chr1:93921883-93921902 None:intergenic 40.0%
TCTTACTTCCTTCTCTGCAT+GGG - Chr1:93922141-93922160 MsG0180005608.01.T01:CDS 40.0%
TGAGAAATGGAAGGTGAGTT+TGG - Chr1:93920440-93920459 MsG0180005608.01.T01:CDS 40.0%
TGCGAAAGTAAATGGGATCA+AGG + Chr1:93922059-93922078 None:intergenic 40.0%
TGGAAGAAAAAAGTCGGCAA+TGG - Chr1:93921418-93921437 MsG0180005608.01.T01:CDS 40.0%
TGTGTTAGAGTCTCTTGTTC+CGG - Chr1:93920344-93920363 MsG0180005608.01.T01:CDS 40.0%
TGTTTGAAGATGGATGCGTT+AGG - Chr1:93920141-93920160 MsG0180005608.01.T01:CDS 40.0%
TTATCACCTCTCTTATCCAC+CGG + Chr1:93920291-93920310 None:intergenic 40.0%
TTGTTAGATCTCCATCACAC+GGG - Chr1:93921797-93921816 MsG0180005608.01.T01:CDS 40.0%
! ACGATCTGTTTCCTTTTCTC+AGG + Chr1:93921661-93921680 None:intergenic 40.0%
! AGCTATATCGGAGGTTTTTC+CGG - Chr1:93920269-93920288 MsG0180005608.01.T01:CDS 40.0%
! CTCGTGTTCTTTTATTGGCA+GGG + Chr1:93921687-93921706 None:intergenic 40.0%
! GATTGAAGAGTTGATCAGCA+AGG - Chr1:93920792-93920811 MsG0180005608.01.T01:intron 40.0%
! GCTTGCTCGTGTTCTTTTAT+TGG + Chr1:93921692-93921711 None:intergenic 40.0%
! TGGTGGCTATGGAAATGTTT+TGG - Chr1:93921960-93921979 MsG0180005608.01.T01:CDS 40.0%
! TTGTTATTGCTTCTGCTTGG+AGG - Chr1:93920574-93920593 MsG0180005608.01.T01:intron 40.0%
!! AGCTTGTTATTGCTTCTGCT+TGG - Chr1:93920571-93920590 MsG0180005608.01.T01:intron 40.0%
!!! GGTTTTGGGGTTTTGTGATA+GGG - Chr1:93920163-93920182 MsG0180005608.01.T01:CDS 40.0%
AACATCCTCGACTTCAACAC+CGG + Chr1:93920381-93920400 None:intergenic 45.0%
AAGTCGCTTCTTCAGACTCT+CGG + Chr1:93921617-93921636 None:intergenic 45.0%
AGGTTTAAGAGCTGAGATGC+CGG - Chr1:93920203-93920222 MsG0180005608.01.T01:CDS 45.0%
ATACATTCCCCTAAAGCCTC+CGG + Chr1:93920225-93920244 None:intergenic 45.0%
ATTTGAGAAGGGGAACAGGT+GGG + Chr1:93920873-93920892 None:intergenic 45.0%
CAGAGAGTTCTTTCCAAAGG+AGG + Chr1:93919849-93919868 None:intergenic 45.0%
CCCATAGTACTAGCTGATTG+TGG - Chr1:93922193-93922212 MsG0180005608.01.T01:CDS 45.0%
CCCATGAGTTATCCTGCATA+TGG - Chr1:93921940-93921959 MsG0180005608.01.T01:CDS 45.0%
CCTAAGCTTGCACTTTCACT+CGG - Chr1:93920606-93920625 MsG0180005608.01.T01:intron 45.0%
CTAATAATGCAGGACGAGCT+GGG - Chr1:93920941-93920960 MsG0180005608.01.T01:intron 45.0%
CTTACTTCCTTCTCTGCATG+GGG - Chr1:93922142-93922161 MsG0180005608.01.T01:CDS 45.0%
CTTCTGCTTCCATACATGTG+GGG + Chr1:93921859-93921878 None:intergenic 45.0%
GAAATGGAAGGTGAGTTTGG+AGG - Chr1:93920443-93920462 MsG0180005608.01.T01:CDS 45.0%
GACTTCTGCTTCCATACATG+TGG + Chr1:93921861-93921880 None:intergenic 45.0%
GATAACTCATGGGTGGTACT+GGG + Chr1:93921933-93921952 None:intergenic 45.0%
GGATGTTGCTGAGAAATGGA+AGG - Chr1:93920431-93920450 MsG0180005608.01.T01:CDS 45.0%
GTCTTACTTCCTTCTCTGCA+TGG - Chr1:93922140-93922159 MsG0180005608.01.T01:CDS 45.0%
GTTAACTCGGTTAACTCACC+AGG + Chr1:93919772-93919791 None:intergenic 45.0%
TAACAAATGTAGGTGCGGCA+GGG + Chr1:93921783-93921802 None:intergenic 45.0%
TAATAATGCAGGACGAGCTG+GGG - Chr1:93920942-93920961 MsG0180005608.01.T01:intron 45.0%
TATCCTGCATATGGTGGCTA+TGG - Chr1:93921949-93921968 MsG0180005608.01.T01:CDS 45.0%
TATCCTGGGATCGTACTGAA+GGG - Chr1:93922316-93922335 MsG0180005608.01.T01:five_prime_UTR 45.0%
TATGCAGGATAACTCATGGG+TGG + Chr1:93921940-93921959 None:intergenic 45.0%
TGTGCTTGAAGCTATATCGG+AGG - Chr1:93920260-93920279 MsG0180005608.01.T01:CDS 45.0%
TTACTTCCTTCTCTGCATGG+GGG - Chr1:93922143-93922162 MsG0180005608.01.T01:CDS 45.0%
TTATCCTGGGATCGTACTGA+AGG - Chr1:93922315-93922334 MsG0180005608.01.T01:five_prime_UTR 45.0%
TTTCCATAGCCACCATATGC+AGG + Chr1:93921955-93921974 None:intergenic 45.0%
! AGATGGATGCGTTAGGGTTT+TGG - Chr1:93920148-93920167 MsG0180005608.01.T01:CDS 45.0%
! ATGGATGCGTTAGGGTTTTG+GGG - Chr1:93920150-93920169 MsG0180005608.01.T01:CDS 45.0%
! CACATTTGAAGTGGGTCTTG+TGG - Chr1:93920840-93920859 MsG0180005608.01.T01:intron 45.0%
! GAGGGTGCAAGAAGTCATAA+GGG + Chr1:93919830-93919849 None:intergenic 45.0%
! GATGGATGCGTTAGGGTTTT+GGG - Chr1:93920149-93920168 MsG0180005608.01.T01:CDS 45.0%
! GCTCGTGTTCTTTTATTGGC+AGG + Chr1:93921688-93921707 None:intergenic 45.0%
! GGAGCGAATTTTGCGGTTTA+AGG + Chr1:93919917-93919936 None:intergenic 45.0%
! GTTTTTCCGGTGGATAAGAG+AGG - Chr1:93920282-93920301 MsG0180005608.01.T01:CDS 45.0%
! TATATCGGAGGTTTTTCCGG+TGG - Chr1:93920272-93920291 MsG0180005608.01.T01:CDS 45.0%
!! GGTGAGGTTGATAATGGTGA+AGG - Chr1:93920093-93920112 MsG0180005608.01.T01:CDS 45.0%
!! GGTGATGGTGAGGTTGATAA+TGG - Chr1:93920087-93920106 MsG0180005608.01.T01:CDS 45.0%
!! TGGCTCTGGTGAATAAGCAT+AGG + Chr1:93921887-93921906 None:intergenic 45.0%
!!! GGGTTTTGGGGTTTTGTGAT+AGG - Chr1:93920162-93920181 MsG0180005608.01.T01:CDS 45.0%
AAAGGAGCAGTCTGCACTCA+AGG - Chr1:93921543-93921562 MsG0180005608.01.T01:CDS 50.0%
AAGGTGAGTTTGGAGGAACG+TGG - Chr1:93920450-93920469 MsG0180005608.01.T01:CDS 50.0%
ACACGAGCAAGCAACAGCAA+TGG - Chr1:93921700-93921719 MsG0180005608.01.T01:CDS 50.0%
ACATCCTCGACTTCAACACC+GGG + Chr1:93920380-93920399 None:intergenic 50.0%
AGAGTCTCTTGTTCCGGTGA+TGG - Chr1:93920350-93920369 MsG0180005608.01.T01:CDS 50.0%
ATCCTGGGATCGTACTGAAG+GGG - Chr1:93922317-93922336 MsG0180005608.01.T01:five_prime_UTR 50.0%
CCAGCTCGTCCTGCATTATT+AGG + Chr1:93920943-93920962 None:intergenic 50.0%
CCTAATAATGCAGGACGAGC+TGG - Chr1:93920940-93920959 MsG0180005608.01.T01:intron 50.0%
CTAACAAATGTAGGTGCGGC+AGG + Chr1:93921784-93921803 None:intergenic 50.0%
CTCGGTTAACTCACCAGGAT+CGG + Chr1:93919767-93919786 None:intergenic 50.0%
GAAGAAGCGACTTGAACAGC+TGG - Chr1:93921624-93921643 MsG0180005608.01.T01:CDS 50.0%
GAGGATGTTGAGGATGGTGA+TGG - Chr1:93920072-93920091 MsG0180005608.01.T01:CDS 50.0%
GATTTGAGAAGGGGAACAGG+TGG + Chr1:93920874-93920893 None:intergenic 50.0%
GCTTCAAGCACAAACTTCGC+CGG + Chr1:93920252-93920271 None:intergenic 50.0%
GGATAACTCATGGGTGGTAC+TGG + Chr1:93921934-93921953 None:intergenic 50.0%
GGTCTCGAGAATCAAATGCC+CGG - Chr1:93920627-93920646 MsG0180005608.01.T01:intron 50.0%
GGTGCAAGAAGTCATAAGGG+AGG + Chr1:93919827-93919846 None:intergenic 50.0%
GTACGAGAGGATGTTGAGGA+TGG - Chr1:93920066-93920085 MsG0180005608.01.T01:CDS 50.0%
TACTTCCTTCTCTGCATGGG+GGG - Chr1:93922144-93922163 MsG0180005608.01.T01:CDS 50.0%
TCGGTTAACTCACCAGGATC+GGG + Chr1:93919766-93919785 None:intergenic 50.0%
TCGTGTACGAGAGGATGTTG+AGG - Chr1:93920062-93920081 MsG0180005608.01.T01:CDS 50.0%
TGACTTCTTGCACCCTCCTT+TGG - Chr1:93919833-93919852 MsG0180005608.01.T01:three_prime_UTR 50.0%
TGCTTCCATACATGTGGGGT+GGG + Chr1:93921855-93921874 None:intergenic 50.0%
TTTAAGAGCTGAGATGCCGG+AGG - Chr1:93920206-93920225 MsG0180005608.01.T01:CDS 50.0%
! AAACGTCCAGCTTTAGCAGG+TGG + Chr1:93921736-93921755 None:intergenic 50.0%
! CCGAGTGAAAGTGCAAGCTT+AGG + Chr1:93920609-93920628 None:intergenic 50.0%
! GGAGGGTGCAAGAAGTCATA+AGG + Chr1:93919831-93919850 None:intergenic 50.0%
! GGTGTTGAAGTCGAGGATGT+TGG - Chr1:93920380-93920399 MsG0180005608.01.T01:CDS 50.0%
! GTCAAACGTCCAGCTTTAGC+AGG + Chr1:93921739-93921758 None:intergenic 50.0%
!! ACGATGACGGAGGAGGTTAA+GGG + Chr1:93919962-93919981 None:intergenic 50.0%
!! TGTTGAGGATGGTGATGGTG+AGG - Chr1:93920077-93920096 MsG0180005608.01.T01:CDS 50.0%
ATGTGGGGTGGGGAAGGATA+CGG + Chr1:93921844-93921863 None:intergenic 55.0%
CAGCGAGAGCAGCTTCAGTA+CGG + Chr1:93920035-93920054 None:intergenic 55.0%
CCAATGCCACCTGCTAAAGC+TGG - Chr1:93921727-93921746 MsG0180005608.01.T01:CDS 55.0%
CGAGCAAGCAACAGCAATGG+AGG - Chr1:93921703-93921722 MsG0180005608.01.T01:CDS 55.0%
CGAGCGTGGATTCACGATGA+CGG + Chr1:93919975-93919994 None:intergenic 55.0%
CGGTTAACTCACCAGGATCG+GGG + Chr1:93919765-93919784 None:intergenic 55.0%
CTGAGATGCCGGAGGCTTTA+GGG - Chr1:93920214-93920233 MsG0180005608.01.T01:CDS 55.0%
CTGCTTCCATACATGTGGGG+TGG + Chr1:93921856-93921875 None:intergenic 55.0%
GATACGGTGGAAGAGCAGCT+GGG + Chr1:93921828-93921847 None:intergenic 55.0%
GCGACTTGAACAGCTGGAGA+AGG - Chr1:93921630-93921649 MsG0180005608.01.T01:CDS 55.0%
GCTTCCATACATGTGGGGTG+GGG + Chr1:93921854-93921873 None:intergenic 55.0%
GCTTCTTCAGACTCTCGGCA+GGG + Chr1:93921612-93921631 None:intergenic 55.0%
GGGTATGACGCTGCAATAGC+TGG + Chr1:93921913-93921932 None:intergenic 55.0%
GTGAGTTTGGAGGAACGTGG+TGG - Chr1:93920453-93920472 MsG0180005608.01.T01:CDS 55.0%
TGCACTCTCTCGTGTACGAG+AGG - Chr1:93920053-93920072 MsG0180005608.01.T01:CDS 55.0%
TTCCCCTTCAGTACGATCCC+AGG + Chr1:93922322-93922341 None:intergenic 55.0%
! CCAGCTTTAGCAGGTGGCAT+TGG + Chr1:93921730-93921749 None:intergenic 55.0%
! GTCTCTTGTTCCGGTGATGG+TGG - Chr1:93920353-93920372 MsG0180005608.01.T01:CDS 55.0%
! TGAGATGCCGGAGGCTTTAG+GGG - Chr1:93920215-93920234 MsG0180005608.01.T01:CDS 55.0%
!! CACGATGACGGAGGAGGTTA+AGG + Chr1:93919963-93919982 None:intergenic 55.0%
!! TGGATTCACGATGACGGAGG+AGG + Chr1:93919969-93919988 None:intergenic 55.0%
AACACCGGGTCCACCATCAC+CGG + Chr1:93920366-93920385 None:intergenic 60.0%
ATGGGGTCAATCCCCGATCC+TGG - Chr1:93919751-93919770 MsG0180005608.01.T01:three_prime_UTR 60.0%
CCATACATGTGGGGTGGGGA+AGG + Chr1:93921850-93921869 None:intergenic 60.0%
CCTTCCCCACCCCACATGTA+TGG - Chr1:93921847-93921866 MsG0180005608.01.T01:CDS 60.0%
CGCTTCTTCAGACTCTCGGC+AGG + Chr1:93921613-93921632 None:intergenic 60.0%
CGGCAGGGAATTCAGCCTCA+AGG + Chr1:93921597-93921616 None:intergenic 60.0%
GACGCTGCAATAGCTGGTGC+TGG + Chr1:93921907-93921926 None:intergenic 60.0%
GCTGAGATGCCGGAGGCTTT+AGG - Chr1:93920213-93920232 MsG0180005608.01.T01:CDS 60.0%
GGATACGGTGGAAGAGCAGC+TGG + Chr1:93921829-93921848 None:intergenic 60.0%
TCTCACCCCCCATGCAGAGA+AGG + Chr1:93922152-93922171 None:intergenic 60.0%
! GCGTGGATTCACGATGACGG+AGG + Chr1:93919972-93919991 None:intergenic 60.0%
! GCTGGGTATTGCCCGTGTGA+TGG + Chr1:93921811-93921830 None:intergenic 60.0%
! TGGACCCGGTGTTGAAGTCG+AGG - Chr1:93920373-93920392 MsG0180005608.01.T01:CDS 60.0%
!! GCAATAGCTGGTGCTGGCTC+TGG + Chr1:93921901-93921920 None:intergenic 60.0%
!! TGTTCCGGTGATGGTGGACC+CGG - Chr1:93920359-93920378 MsG0180005608.01.T01:CDS 60.0%
TGGGGTGGGGAAGGATACGG+TGG + Chr1:93921841-93921860 None:intergenic 65.0%
CTGAAGCGCGTCGTCGAGCG+TGG + Chr1:93919989-93920008 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 93919646 93922409 93919646 ID=MsG0180005608.01;Name=MsG0180005608.01
Chr1 mRNA 93919646 93922409 93919646 ID=MsG0180005608.01.T01;Parent=MsG0180005608.01;Name=MsG0180005608.01.T01;_AED=0.17;_eAED=0.17;_QI=105|1|1|1|1|1|3|395|519
Chr1 exon 93919646 93920526 93919646 ID=MsG0180005608.01.T01:exon:49983;Parent=MsG0180005608.01.T01
Chr1 exon 93921092 93921267 93921092 ID=MsG0180005608.01.T01:exon:49982;Parent=MsG0180005608.01.T01
Chr1 exon 93921407 93922409 93921407 ID=MsG0180005608.01.T01:exon:49981;Parent=MsG0180005608.01.T01
Chr1 five_prime_UTR 93922305 93922409 93922305 ID=MsG0180005608.01.T01:five_prime_utr;Parent=MsG0180005608.01.T01
Chr1 CDS 93921407 93922304 93921407 ID=MsG0180005608.01.T01:cds;Parent=MsG0180005608.01.T01
Chr1 CDS 93921092 93921267 93921092 ID=MsG0180005608.01.T01:cds;Parent=MsG0180005608.01.T01
Chr1 CDS 93920041 93920526 93920041 ID=MsG0180005608.01.T01:cds;Parent=MsG0180005608.01.T01
Chr1 three_prime_UTR 93919646 93920040 93919646 ID=MsG0180005608.01.T01:three_prime_utr;Parent=MsG0180005608.01.T01
Gene Sequence

>MsG0180005608.01.T01

ATGGGGTCAATCCCCGATCCTGGTGAGTTAACCGAGTTAACTCAACCAAGCTTTGATGATTTTCAACGTCAAACCTCCCTTATGACTTCTTGCACCCTCCTTTGGAAAGAACTCTCTGATCACTTCTCATCTTTAGAACAAGATCTTCTCAACAAATCTGAAGCCTTAAACCGCAAAATTCGCTCCTTAGATAACCAGACTAATGAATCCCTTAACCTCCTCCGTCATCGTGAATCCACGCTCGACGACGCGCTTCAGATCGCGCTTCGCGATATCGATAACCGTACTGAAGCTGCTCTCGCTGCACTCTCTCGTGTACGAGAGGATGTTGAGGATGGTGATGGTGAGGTTGATAATGGTGAAGGATTGATGCTGAAATTAAAGTCGTTTTGTTTGAAGATGGATGCGTTAGGGTTTTGGGGTTTTGTGATAGGGAAGAAGAAGGAATTAGAAGGTTTAAGAGCTGAGATGCCGGAGGCTTTAGGGGAATGTATAGATCCGGCGAAGTTTGTGCTTGAAGCTATATCGGAGGTTTTTCCGGTGGATAAGAGAGGTGATAAAAGTGGAAATGATCTTGGTTGGGCTTGTGTGCTTGTGTTAGAGTCTCTTGTTCCGGTGATGGTGGACCCGGTGTTGAAGTCGAGGATGTTGGTGACTCCTACTGTGAAGAAACTTGCAAAGGATGTTGCTGAGAAATGGAAGGTGAGTTTGGAGGAACGTGGTGGTGTTGAGAATGTGAAGACTCCTGATGTTCATACATTCTTGCAGCATCTTGTTACTTTTGGGATTGTTGATAGTGATGATTTGGGATTGTATCGGAAGCTTGTTATTGCTTCTGCTTGGAGGAAACACATGCCTAAGCTTGCACTTTCACTCGGTCTCGAGAATCAAATGCCCGATATGATTGAAGAGTTGATCAGCAAGGGACAACAGCTTGATGCTGTTCATTTCACATTTGAAGTGGGTCTTGTGGATAAGTTCCCACCTGTTCCCCTTCTCAAATCATACTTGAAGGATGCTAAGAAAGTTGCTGCGTCTATATTGGAAGATCCTAATAATGCAGGACGAGCTGGGTATCTAGCTGCAAGAAAGGAGCAGTCTGCACTCAAGGCCGTGATTAAATGCATCGAAGAATACAACCTTGAGGCTGAATTCCCTGCCGAGAGTCTGAAGAAGCGACTTGAACAGCTGGAGAAGGTTAAGCCTGAGAAAAGGAAACAGATCGTTGTCCCTGCCAATAAAAGAACACGAGCAAGCAACAGCAATGGAGGTCCAATGCCACCTGCTAAAGCTGGACGTTTGACTAATGCATATGTATCATCTTTCCCTGCCGCACCTACATTTGTTAGATCTCCATCACACGGGCAATACCCAGCTGCTCTTCCACCGTATCCTTCCCCACCCCACATGTATGGAAGCAGAAGTCCATCCTATGCTTATTCACCAGAGCCAGCACCAGCTATTGCAGCGTCATACCCAGTACCACCCATGAGTTATCCTGCATATGGTGGCTATGGAAATGTTTTGGCACCTACTTATCAGCAAGCTTACTACCGATAG
Protein sequence

>MsG0180005608.01.T01

MGSIPDPGELTELTQPSFDDFQRQTSLMTSCTLLWKELSDHFSSLEQDLLNKSEALNRKIRSLDNQTNESLNLLRHRESTLDDALQIALRDIDNRTEAALAALSRVREDVEDGDGEVDNGEGLMLKLKSFCLKMDALGFWGFVIGKKKELEGLRAEMPEALGECIDPAKFVLEAISEVFPVDKRGDKSGNDLGWACVLVLESLVPVMVDPVLKSRMLVTPTVKKLAKDVAEKWKVSLEERGGVENVKTPDVHTFLQHLVTFGIVDSDDLGLYRKLVIASAWRKHMPKLALSLGLENQMPDMIEELISKGQQLDAVHFTFEVGLVDKFPPVPLLKSYLKDAKKVAASILEDPNNAGRAGYLAARKEQSALKAVIKCIEEYNLEAEFPAESLKKRLEQLEKVKPEKRKQIVVPANKRTRASNSNGGPMPPAKAGRLTNAYVSSFPAAPTFVRSPSHGQYPAALPPYPSPPHMYGSRSPSYAYSPEPAPAIAASYPVPPMSYPAYGGYGNVLAPTYQQAYYR*