Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021175.01.T01 | XP_003606842.1 | 92.774 | 429 | 14 | 2 | 1 | 412 | 1 | 429 | 0 | 807 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021175.01.T01 | Q8L3W1 | 46.819 | 393 | 139 | 8 | 1 | 377 | 1 | 339 | 5.13E-108 | 324 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021175.01.T01 | G7JEY1 | 92.774 | 429 | 14 | 2 | 1 | 412 | 1 | 429 | 0.0 | 807 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0480021175.01.T01 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048633.01 | MsG0480021175.01 | 0.805701 | 1.175351e-49 | 6.260932e-47 |
| MsG0080048889.01 | MsG0480021175.01 | 0.817338 | 3.472256e-52 | 2.521783e-49 |
| MsG0080049023.01 | MsG0480021175.01 | -0.811226 | 7.782261e-51 | 4.790409e-48 |
| MsG0080049038.01 | MsG0480021175.01 | -0.823263 | 1.521904e-53 | 1.303909e-50 |
| MsG0080049043.01 | MsG0480021175.01 | 0.814525 | 1.473602e-51 | 9.911518e-49 |
| MsG0180000002.01 | MsG0480021175.01 | 0.851525 | 8.385120e-61 | 1.701927e-57 |
| MsG0180000138.01 | MsG0480021175.01 | 0.808966 | 2.388981e-50 | 1.384997e-47 |
| MsG0180000367.01 | MsG0480021175.01 | 0.824741 | 6.849933e-54 | 6.121195e-51 |
| MsG0180000556.01 | MsG0480021175.01 | 0.812888 | 3.380255e-51 | 2.174821e-48 |
| MsG0180000719.01 | MsG0480021175.01 | -0.847393 | 1.189898e-59 | 2.111911e-56 |
| MsG0180001147.01 | MsG0480021175.01 | -0.906880 | 9.247099e-81 | 1.598340e-76 |
| MsG0180001264.01 | MsG0480021175.01 | 0.821502 | 3.902040e-53 | 3.180064e-50 |
| MsG0180001588.01 | MsG0480021175.01 | 0.808570 | 2.902439e-50 | 1.665231e-47 |
| MsG0180001614.01 | MsG0480021175.01 | -0.854458 | 1.214254e-61 | 2.713512e-58 |
| MsG0180001656.01 | MsG0480021175.01 | -0.802689 | 4.978736e-49 | 2.454504e-46 |
| MsG0180001719.01 | MsG0480021175.01 | 0.804796 | 1.818469e-49 | 9.463594e-47 |
| MsG0180002809.01 | MsG0480021175.01 | -0.800202 | 1.609590e-48 | 7.449790e-46 |
| MsG0180003238.01 | MsG0480021175.01 | 0.841977 | 3.424501e-58 | 5.117368e-55 |
| MsG0180003324.01 | MsG0480021175.01 | -0.835419 | 1.696453e-56 | 2.073374e-53 |
| MsG0180003430.01 | MsG0480021175.01 | 0.845541 | 3.808896e-59 | 6.368653e-56 |
| MsG0180003484.01 | MsG0480021175.01 | 0.802574 | 5.259768e-49 | 2.585374e-46 |
| MsG0180003620.01 | MsG0480021175.01 | 0.902277 | 1.142175e-78 | 1.604633e-74 |
| MsG0180003880.01 | MsG0480021175.01 | -0.815928 | 7.190465e-52 | 5.024232e-49 |
| MsG0180003905.01 | MsG0480021175.01 | 0.830967 | 2.179532e-55 | 2.332356e-52 |
| MsG0180004124.01 | MsG0480021175.01 | -0.865801 | 4.536494e-65 | 1.495028e-61 |
| MsG0180004125.01 | MsG0480021175.01 | -0.869056 | 4.121839e-66 | 1.525182e-62 |
| MsG0180004322.01 | MsG0480021175.01 | -0.828917 | 6.884129e-55 | 6.938266e-52 |
| MsG0180004559.01 | MsG0480021175.01 | 0.811873 | 5.629890e-51 | 3.525189e-48 |
| MsG0180004581.01 | MsG0480021175.01 | -0.803107 | 4.082663e-49 | 2.034142e-46 |
| MsG0180004597.01 | MsG0480021175.01 | 0.828968 | 6.691557e-55 | 6.754213e-52 |
| MsG0180004688.01 | MsG0480021175.01 | 0.840162 | 1.026379e-57 | 1.449687e-54 |
| MsG0180004731.01 | MsG0480021175.01 | -0.816005 | 6.910909e-52 | 4.839336e-49 |
| MsG0180004737.01 | MsG0480021175.01 | -0.833073 | 6.575659e-56 | 7.491112e-53 |
| MsG0180004787.01 | MsG0480021175.01 | -0.826111 | 3.246062e-54 | 3.015952e-51 |
| MsG0180005028.01 | MsG0480021175.01 | 0.879514 | 1.171064e-69 | 6.366682e-66 |
| MsG0180005127.01 | MsG0480021175.01 | 0.807456 | 5.009667e-50 | 2.791732e-47 |
| MsG0180005369.01 | MsG0480021175.01 | -0.842758 | 2.126344e-58 | 3.256060e-55 |
| MsG0180005608.01 | MsG0480021175.01 | 0.816697 | 4.837475e-52 | 3.452051e-49 |
| MsG0180005633.01 | MsG0480021175.01 | 0.834752 | 2.498774e-56 | 2.992986e-53 |
| MsG0180005767.01 | MsG0480021175.01 | -0.805633 | 1.214862e-49 | 6.459626e-47 |
| MsG0180005819.01 | MsG0480021175.01 | 0.876195 | 1.693012e-68 | 8.133390e-65 |
| MsG0180005984.01 | MsG0480021175.01 | 0.815134 | 1.079912e-51 | 7.383179e-49 |
| MsG0180006063.01 | MsG0480021175.01 | -0.813260 | 2.800285e-51 | 1.819770e-48 |
| MsG0180006116.01 | MsG0480021175.01 | 0.807578 | 4.721214e-50 | 2.639033e-47 |
| MsG0180006183.01 | MsG0480021175.01 | 0.809569 | 1.773210e-50 | 1.044778e-47 |
| MsG0180006212.01 | MsG0480021175.01 | -0.800158 | 1.643168e-48 | 7.596528e-46 |
| MsG0280006381.01 | MsG0480021175.01 | -0.808744 | 2.664549e-50 | 1.535673e-47 |
| MsG0280006402.01 | MsG0480021175.01 | -0.851803 | 6.992901e-61 | 1.431974e-57 |
| MsG0280010617.01 | MsG0480021175.01 | 0.860459 | 2.035730e-63 | 5.568972e-60 |
| MsG0280010825.01 | MsG0480021175.01 | 0.859355 | 4.379835e-63 | 1.153564e-59 |
| MsG0280010854.01 | MsG0480021175.01 | -0.862947 | 3.531277e-64 | 1.052633e-60 |
| MsG0280010994.01 | MsG0480021175.01 | -0.834414 | 3.039923e-56 | 3.605062e-53 |
| MsG0280011050.01 | MsG0480021175.01 | 0.829803 | 4.196522e-55 | 4.341709e-52 |
| MsG0280011269.01 | MsG0480021175.01 | 0.824628 | 7.281051e-54 | 6.485554e-51 |
| MsG0280011475.01 | MsG0480021175.01 | -0.847905 | 8.599492e-60 | 1.551375e-56 |
| MsG0380012157.01 | MsG0480021175.01 | -0.804899 | 1.731062e-49 | 9.033138e-47 |
| MsG0380013063.01 | MsG0480021175.01 | -0.809065 | 2.274633e-50 | 1.322281e-47 |
| MsG0380014029.01 | MsG0480021175.01 | -0.800182 | 1.624855e-48 | 7.516653e-46 |
| MsG0380014231.01 | MsG0480021175.01 | -0.821885 | 3.182424e-53 | 2.622042e-50 |
| MsG0380014544.01 | MsG0480021175.01 | 0.807079 | 6.022484e-50 | 3.323112e-47 |
| MsG0380014642.01 | MsG0480021175.01 | -0.807270 | 5.486697e-50 | 3.042775e-47 |
| MsG0380014735.01 | MsG0480021175.01 | -0.823854 | 1.106953e-53 | 9.644471e-51 |
| MsG0480018486.01 | MsG0480021175.01 | 0.814850 | 1.248647e-51 | 8.471844e-49 |
| MsG0480019183.01 | MsG0480021175.01 | -0.804428 | 2.170818e-49 | 1.118936e-46 |
| MsG0480019601.01 | MsG0480021175.01 | 0.831243 | 1.864354e-55 | 2.011272e-52 |
| MsG0480020937.01 | MsG0480021175.01 | 0.836615 | 8.433626e-57 | 1.068395e-53 |
| MsG0480020938.01 | MsG0480021175.01 | -0.820545 | 6.481889e-53 | 5.144012e-50 |
| MsG0480020958.01 | MsG0480021175.01 | 0.802574 | 5.259830e-49 | 2.585380e-46 |
| MsG0480021151.01 | MsG0480021175.01 | -0.828027 | 1.129088e-54 | 1.108970e-51 |
| MsG0480021175.01 | MsG0480021224.01 | 0.826847 | 2.166795e-54 | 2.055952e-51 |
| MsG0480021175.01 | MsG0480021226.01 | 0.848982 | 4.330015e-60 | 8.088321e-57 |
| MsG0480021175.01 | MsG0480021740.01 | 0.802676 | 5.011048e-49 | 2.469525e-46 |
| MsG0480021175.01 | MsG0480022141.01 | 0.820367 | 7.120584e-53 | 5.623185e-50 |
| MsG0480021175.01 | MsG0480022142.01 | 0.822633 | 2.134551e-53 | 1.796714e-50 |
| MsG0480021175.01 | MsG0480022242.01 | -0.812816 | 3.505028e-51 | 2.250630e-48 |
| MsG0480021175.01 | MsG0480022244.01 | -0.819840 | 9.403081e-53 | 7.317718e-50 |
| MsG0480021175.01 | MsG0480022378.01 | 0.800464 | 1.423578e-48 | 6.632743e-46 |
| MsG0480021175.01 | MsG0480023067.01 | 0.842360 | 2.711809e-58 | 4.101901e-55 |
| MsG0480021175.01 | MsG0480023125.01 | 0.878333 | 3.058307e-69 | 1.590527e-65 |
| MsG0480021175.01 | MsG0480023152.01 | -0.818131 | 2.300755e-52 | 1.707644e-49 |
| MsG0480021175.01 | MsG0480023173.01 | -0.800022 | 1.751265e-48 | 8.068614e-46 |
| MsG0480021175.01 | MsG0480023375.01 | -0.839525 | 1.504148e-57 | 2.082604e-54 |
| MsG0480021175.01 | MsG0480023386.01 | -0.814280 | 1.669217e-51 | 1.115272e-48 |
| MsG0480021175.01 | MsG0480023429.01 | 0.804677 | 1.925527e-49 | 9.989646e-47 |
| MsG0480021175.01 | MsG0480023532.01 | 0.801385 | 9.229924e-49 | 4.402006e-46 |
| MsG0480021175.01 | MsG0480023575.01 | 0.825254 | 5.180863e-54 | 4.697765e-51 |
| MsG0480021175.01 | MsG0480023626.01 | 0.886806 | 2.481034e-72 | 1.798468e-68 |
| MsG0480021175.01 | MsG0480023663.01 | 0.853210 | 2.777852e-61 | 5.956781e-58 |
| MsG0480021175.01 | MsG0480023780.01 | 0.811561 | 6.582082e-51 | 4.087631e-48 |
| MsG0480021175.01 | MsG0480023913.01 | 0.803972 | 2.701323e-49 | 1.376251e-46 |
| MsG0480021175.01 | MsG0480024019.01 | 0.821042 | 4.981529e-53 | 4.008850e-50 |
| MsG0480021175.01 | MsG0580024276.01 | 0.826602 | 2.478762e-54 | 2.335366e-51 |
| MsG0480021175.01 | MsG0580024278.01 | -0.802875 | 4.558751e-49 | 2.258089e-46 |
| MsG0480021175.01 | MsG0580024309.01 | -0.813862 | 2.064310e-51 | 1.363669e-48 |
| MsG0480021175.01 | MsG0580024493.01 | -0.814652 | 1.381391e-51 | 9.322793e-49 |
| MsG0480021175.01 | MsG0580025105.01 | -0.802234 | 6.180544e-49 | 3.011803e-46 |
| MsG0480021175.01 | MsG0580025463.01 | 0.828998 | 6.581445e-55 | 6.648707e-52 |
| MsG0480021175.01 | MsG0580025464.01 | 0.819842 | 9.390005e-53 | 7.308111e-50 |
| MsG0480021175.01 | MsG0580025486.01 | -0.829672 | 4.514776e-55 | 4.652720e-52 |
| MsG0480021175.01 | MsG0580025620.01 | 0.820655 | 6.116980e-53 | 4.868778e-50 |
| MsG0480021175.01 | MsG0580025896.01 | 0.808024 | 3.794246e-50 | 2.145949e-47 |
| MsG0480021175.01 | MsG0580026029.01 | 0.854620 | 1.090572e-61 | 2.450239e-58 |
| MsG0480021175.01 | MsG0580026073.01 | -0.838171 | 3.369184e-57 | 4.475625e-54 |
| MsG0480021175.01 | MsG0580026362.01 | -0.818809 | 1.614770e-52 | 1.221123e-49 |
| MsG0480021175.01 | MsG0580026492.01 | 0.801323 | 9.505683e-49 | 4.526410e-46 |
| MsG0480021175.01 | MsG0580026546.01 | 0.842891 | 1.959698e-58 | 3.013528e-55 |
| MsG0480021175.01 | MsG0580027276.01 | -0.816293 | 5.958633e-52 | 4.205766e-49 |
| MsG0480021175.01 | MsG0580027517.01 | 0.845475 | 3.969726e-59 | 6.623380e-56 |
| MsG0480021175.01 | MsG0580028159.01 | -0.819650 | 1.039238e-52 | 8.044555e-50 |
| MsG0480021175.01 | MsG0580028916.01 | 0.881785 | 1.798647e-70 | 1.067856e-66 |
| MsG0480021175.01 | MsG0580028927.01 | 0.809445 | 1.885237e-50 | 1.107078e-47 |
| MsG0480021175.01 | MsG0580029623.01 | 0.817803 | 2.728095e-52 | 2.006793e-49 |
| MsG0480021175.01 | MsG0580029696.01 | 0.821734 | 3.448706e-53 | 2.829140e-50 |
| MsG0480021175.01 | MsG0580029792.01 | -0.815818 | 7.606466e-52 | 5.299100e-49 |
| MsG0480021175.01 | MsG0580030141.01 | 0.804127 | 2.507885e-49 | 1.282771e-46 |
| MsG0480021175.01 | MsG0680030288.01 | 0.843330 | 1.497495e-58 | 2.335271e-55 |
| MsG0480021175.01 | MsG0680030635.01 | -0.806793 | 6.922132e-50 | 3.791510e-47 |
| MsG0480021175.01 | MsG0680031062.01 | 0.846345 | 2.302514e-59 | 3.951102e-56 |
| MsG0480021175.01 | MsG0680031204.01 | -0.824515 | 7.741783e-54 | 6.872652e-51 |
| MsG0480021175.01 | MsG0680031356.01 | 0.838476 | 2.811623e-57 | 3.770267e-54 |
| MsG0480021175.01 | MsG0680034139.01 | 0.887824 | 1.016039e-72 | 7.674534e-69 |
| MsG0480021175.01 | MsG0680035584.01 | -0.803395 | 3.558253e-49 | 1.786111e-46 |
| MsG0480021175.01 | MsG0780036901.01 | 0.808122 | 3.616705e-50 | 2.050830e-47 |
| MsG0480021175.01 | MsG0780038305.01 | 0.822523 | 2.263185e-53 | 1.898976e-50 |
| MsG0480021175.01 | MsG0780038321.01 | 0.831883 | 1.296923e-55 | 1.426250e-52 |
| MsG0480021175.01 | MsG0780038573.01 | -0.815805 | 7.660209e-52 | 5.334770e-49 |
| MsG0480021175.01 | MsG0780038919.01 | 0.815626 | 8.397090e-52 | 5.819646e-49 |
| MsG0480021175.01 | MsG0780039431.01 | 0.807996 | 3.847564e-50 | 2.174455e-47 |
| MsG0480021175.01 | MsG0780039536.01 | 0.921270 | 4.436316e-88 | 1.571288e-83 |
| MsG0480021175.01 | MsG0780039836.01 | -0.811978 | 5.341064e-51 | 3.353924e-48 |
| MsG0480021175.01 | MsG0780040266.01 | 0.821080 | 4.883573e-53 | 3.933984e-50 |
| MsG0480021175.01 | MsG0780040276.01 | 0.834451 | 2.975327e-56 | 3.532394e-53 |
| MsG0480021175.01 | MsG0780040367.01 | 0.814705 | 1.344690e-51 | 9.087965e-49 |
| MsG0480021175.01 | MsG0780040459.01 | 0.802253 | 6.125454e-49 | 2.986448e-46 |
| MsG0480021175.01 | MsG0780040460.01 | 0.866181 | 3.441049e-65 | 1.149272e-61 |
| MsG0480021175.01 | MsG0780040554.01 | 0.830366 | 3.058552e-55 | 3.215814e-52 |
| MsG0480021175.01 | MsG0780040702.01 | -0.800604 | 1.333174e-48 | 6.233773e-46 |
| MsG0480021175.01 | MsG0780040889.01 | 0.806467 | 8.111561e-50 | 4.406043e-47 |
| MsG0480021175.01 | MsG0780040977.01 | 0.810463 | 1.138549e-50 | 6.867362e-48 |
| MsG0480021175.01 | MsG0780040991.01 | 0.803088 | 4.119704e-49 | 2.051591e-46 |
| MsG0480021175.01 | MsG0780041100.01 | 0.807337 | 5.309756e-50 | 2.949757e-47 |
| MsG0480021175.01 | MsG0780041121.01 | -0.800580 | 1.348510e-48 | 6.301663e-46 |
| MsG0480021175.01 | MsG0780041403.01 | 0.805418 | 1.348037e-49 | 7.128057e-47 |
| MsG0480021175.01 | MsG0780041531.01 | -0.852588 | 4.182382e-61 | 8.780925e-58 |
| MsG0480021175.01 | MsG0780041591.01 | 0.839063 | 1.981929e-57 | 2.705644e-54 |
| MsG0480021175.01 | MsG0880041908.01 | -0.803180 | 3.942531e-49 | 1.968122e-46 |
| MsG0480021175.01 | MsG0880041909.01 | -0.808010 | 3.820137e-50 | 2.159798e-47 |
| MsG0480021175.01 | MsG0880042122.01 | 0.805702 | 1.175249e-49 | 6.260401e-47 |
| MsG0480021175.01 | MsG0880042392.01 | 0.815367 | 9.587440e-52 | 6.597176e-49 |
| MsG0480021175.01 | MsG0880042833.01 | 0.800317 | 1.525433e-48 | 7.081273e-46 |
| MsG0480021175.01 | MsG0880043472.01 | 0.823093 | 1.667522e-53 | 1.421927e-50 |
| MsG0480021175.01 | MsG0880044317.01 | -0.803030 | 4.234784e-49 | 2.105847e-46 |
| MsG0480021175.01 | MsG0880044545.01 | -0.814374 | 1.591903e-51 | 1.066301e-48 |
| MsG0480021175.01 | MsG0880044548.01 | -0.833681 | 4.637395e-56 | 5.379242e-53 |
| MsG0480021175.01 | MsG0880044688.01 | 0.821964 | 3.050592e-53 | 2.518952e-50 |
| MsG0480021175.01 | MsG0880044834.01 | -0.807537 | 4.815134e-50 | 2.688837e-47 |
| MsG0480021175.01 | MsG0880044968.01 | -0.833635 | 4.763367e-56 | 5.517636e-53 |
| MsG0480021175.01 | MsG0880045274.01 | -0.817618 | 3.003480e-52 | 2.198051e-49 |
| MsG0480021175.01 | MsG0880045369.01 | -0.801721 | 7.877175e-49 | 3.788736e-46 |
| MsG0480021175.01 | MsG0880045385.01 | -0.813267 | 2.791383e-51 | 1.814329e-48 |
| MsG0480021175.01 | MsG0880045482.01 | 0.866197 | 3.400627e-65 | 1.136318e-61 |
| MsG0480021175.01 | MsG0880045703.01 | -0.818196 | 2.223590e-52 | 1.653351e-49 |
| MsG0480021175.01 | MsG0880045968.01 | -0.825313 | 5.017044e-54 | 4.556819e-51 |
| MsG0480021175.01 | MsG0880045989.01 | 0.828912 | 6.905421e-55 | 6.958519e-52 |
| MsG0480021175.01 | MsG0880045991.01 | 0.819759 | 9.812903e-53 | 7.619495e-50 |
| MsG0480021175.01 | MsG0880046010.01 | -0.806595 | 7.620784e-50 | 4.152864e-47 |
| MsG0480021175.01 | MsG0880046151.01 | -0.811950 | 5.416002e-51 | 3.398439e-48 |
| MsG0480021175.01 | MsG0880046174.01 | -0.845733 | 3.378291e-59 | 5.684424e-56 |
| MsG0480021175.01 | MsG0880046469.01 | -0.801833 | 7.470695e-49 | 3.603620e-46 |
| MsG0480021175.01 | MsG0880046838.01 | -0.805968 | 1.033100e-49 | 5.540731e-47 |
| MsG0480021175.01 | MsG0880046923.01 | 0.809904 | 1.502572e-50 | 8.931532e-48 |
| MsG0480021175.01 | MsG0880047090.01 | 0.850649 | 1.481796e-60 | 2.922723e-57 |
| MsG0480021175.01 | MsG0880047450.01 | 0.811275 | 7.596820e-51 | 4.682077e-48 |
| MsG0480021175.01 | MsG0880047664.01 | 0.806541 | 7.823777e-50 | 4.257814e-47 |
| MsG0480021175.01 | MsG0880047697.01 | 0.806393 | 8.409499e-50 | 4.559031e-47 |
| MsG0380015393.01 | MsG0480021175.01 | 0.814025 | 1.900876e-51 | 1.261258e-48 |
| MsG0380015402.01 | MsG0480021175.01 | 0.831734 | 1.411463e-55 | 1.545370e-52 |
| MsG0380015530.01 | MsG0480021175.01 | -0.828982 | 6.640390e-55 | 6.704886e-52 |
| MsG0380015656.01 | MsG0480021175.01 | 0.836856 | 7.321177e-57 | 9.342947e-54 |
| MsG0380015802.01 | MsG0480021175.01 | -0.818799 | 1.622923e-52 | 1.226951e-49 |
| MsG0380015828.01 | MsG0480021175.01 | -0.843152 | 1.670523e-58 | 2.589874e-55 |
| MsG0380015985.01 | MsG0480021175.01 | -0.818940 | 1.507687e-52 | 1.144482e-49 |
| MsG0380016031.01 | MsG0480021175.01 | 0.849882 | 2.431424e-60 | 4.676798e-57 |
| MsG0380016065.01 | MsG0480021175.01 | -0.812783 | 3.563376e-51 | 2.286203e-48 |
| MsG0380016089.01 | MsG0480021175.01 | -0.814306 | 1.647962e-51 | 1.101861e-48 |
| MsG0380016096.01 | MsG0480021175.01 | -0.817496 | 3.200074e-52 | 2.334221e-49 |
| MsG0380016229.01 | MsG0480021175.01 | -0.814671 | 1.368213e-51 | 9.238332e-49 |
| MsG0380016250.01 | MsG0480021175.01 | 0.816839 | 4.495394e-52 | 3.220601e-49 |
| MsG0380016380.01 | MsG0480021175.01 | -0.830439 | 2.934903e-55 | 3.092149e-52 |
| MsG0380016456.01 | MsG0480021175.01 | -0.806108 | 9.652837e-50 | 5.195491e-47 |
| MsG0380016677.01 | MsG0480021175.01 | 0.801258 | 9.800582e-49 | 4.659244e-46 |
| MsG0380016819.01 | MsG0480021175.01 | 0.842672 | 2.241577e-58 | 3.423362e-55 |
| MsG0380016889.01 | MsG0480021175.01 | -0.823147 | 1.619705e-53 | 1.383287e-50 |
| MsG0380017231.01 | MsG0480021175.01 | 0.801960 | 7.035529e-49 | 3.404515e-46 |
| MsG0380017380.01 | MsG0480021175.01 | 0.850271 | 1.891750e-60 | 3.685388e-57 |
| MsG0380017416.01 | MsG0480021175.01 | 0.826177 | 3.129542e-54 | 2.913261e-51 |
| MsG0380017666.01 | MsG0480021175.01 | 0.812670 | 3.772861e-51 | 2.413526e-48 |
| MsG0380017928.01 | MsG0480021175.01 | -0.807716 | 4.411960e-50 | 2.475223e-47 |
| MsG0380018035.01 | MsG0480021175.01 | -0.817653 | 2.949337e-52 | 2.160513e-49 |
| MsG0380018072.01 | MsG0480021175.01 | -0.809153 | 2.177842e-50 | 1.269017e-47 |
| MsG0480018228.01 | MsG0480021175.01 | 0.804079 | 2.565988e-49 | 1.310924e-46 |
| MsG0480018362.01 | MsG0480021175.01 | 0.806947 | 6.421062e-50 | 3.531078e-47 |
| MsG0280006717.01 | MsG0480021175.01 | 0.832141 | 1.119751e-55 | 1.240528e-52 |
| MsG0280006851.01 | MsG0480021175.01 | 0.809681 | 1.678267e-50 | 9.917621e-48 |
| MsG0280006909.01 | MsG0480021175.01 | 0.807949 | 3.937528e-50 | 2.222510e-47 |
| MsG0280007423.01 | MsG0480021175.01 | -0.823413 | 1.404013e-53 | 1.207914e-50 |
| MsG0280007653.01 | MsG0480021175.01 | -0.807214 | 5.639591e-50 | 3.122905e-47 |
| MsG0280007786.01 | MsG0480021175.01 | 0.825195 | 5.351691e-54 | 4.844567e-51 |
| MsG0280008697.01 | MsG0480021175.01 | 0.867413 | 1.393780e-65 | 4.862346e-62 |
| MsG0280009079.01 | MsG0480021175.01 | -0.807354 | 5.266292e-50 | 2.926853e-47 |
| MsG0280009094.01 | MsG0480021175.01 | -0.804429 | 2.169992e-49 | 1.118541e-46 |
| MsG0280009378.01 | MsG0480021175.01 | 0.809849 | 1.544074e-50 | 9.165015e-48 |
| MsG0280009526.01 | MsG0480021175.01 | 0.805745 | 1.150781e-49 | 6.136902e-47 |
| MsG0280009742.01 | MsG0480021175.01 | -0.819811 | 9.547527e-53 | 7.424274e-50 |
| MsG0280009864.01 | MsG0480021175.01 | -0.820241 | 7.608878e-53 | 5.987705e-50 |
| MsG0280010142.01 | MsG0480021175.01 | -0.804390 | 2.210268e-49 | 1.138210e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021175.01.T01 | MTR_4g068320 | 92.774 | 429 | 14 | 2 | 1 | 412 | 1 | 429 | 0.0 | 807 |
| MsG0480021175.01.T01 | MTR_1g034240 | 58.581 | 437 | 149 | 8 | 2 | 412 | 3 | 433 | 6.02e-178 | 503 |
| MsG0480021175.01.T01 | MTR_1g034210 | 44.192 | 396 | 172 | 8 | 4 | 383 | 5 | 367 | 3.98e-99 | 300 |
| MsG0480021175.01.T01 | MTR_1g034210 | 41.360 | 353 | 158 | 8 | 4 | 340 | 5 | 324 | 3.84e-75 | 237 |
| MsG0480021175.01.T01 | MTR_3g005480 | 36.765 | 136 | 81 | 1 | 3 | 138 | 18 | 148 | 1.98e-23 | 99.0 |
| MsG0480021175.01.T01 | MTR_3g005480 | 37.410 | 139 | 65 | 6 | 257 | 377 | 129 | 263 | 9.48e-14 | 71.2 |
| MsG0480021175.01.T01 | MTR_5g070440 | 42.157 | 102 | 59 | 0 | 3 | 104 | 18 | 119 | 1.05e-22 | 97.4 |
| MsG0480021175.01.T01 | MTR_5g070440 | 36.029 | 136 | 62 | 4 | 263 | 374 | 134 | 268 | 2.77e-13 | 70.1 |
| MsG0480021175.01.T01 | MTR_3g005490 | 40.000 | 110 | 66 | 0 | 3 | 112 | 18 | 127 | 6.97e-22 | 94.7 |
| MsG0480021175.01.T01 | MTR_3g005490 | 35.938 | 128 | 64 | 5 | 267 | 377 | 136 | 262 | 1.30e-11 | 65.1 |
| MsG0480021175.01.T01 | MTR_3g061290 | 37.778 | 135 | 74 | 2 | 6 | 140 | 12 | 136 | 1.71e-21 | 92.0 |
| MsG0480021175.01.T01 | MTR_8g103940 | 39.815 | 108 | 65 | 0 | 6 | 113 | 39 | 146 | 4.55e-21 | 95.5 |
| MsG0480021175.01.T01 | MTR_8g103940 | 35.593 | 118 | 58 | 5 | 281 | 385 | 229 | 341 | 2.88e-13 | 71.6 |
| MsG0480021175.01.T01 | MTR_7g050560 | 41.905 | 105 | 59 | 1 | 6 | 110 | 13 | 115 | 4.85e-21 | 93.6 |
| MsG0480021175.01.T01 | MTR_7g050720 | 40.909 | 110 | 63 | 1 | 1 | 110 | 5 | 112 | 5.06e-21 | 93.6 |
| MsG0480021175.01.T01 | MTR_3g061310 | 36.364 | 132 | 74 | 2 | 6 | 137 | 12 | 133 | 5.18e-21 | 92.8 |
| MsG0480021175.01.T01 | MTR_3g061350 | 36.364 | 132 | 75 | 2 | 6 | 137 | 12 | 134 | 7.74e-21 | 92.0 |
| MsG0480021175.01.T01 | MTR_7g050710 | 41.414 | 99 | 58 | 0 | 6 | 104 | 13 | 111 | 1.08e-20 | 92.4 |
| MsG0480021175.01.T01 | MTR_3g061320 | 35.606 | 132 | 75 | 2 | 6 | 137 | 12 | 133 | 6.82e-20 | 89.4 |
| MsG0480021175.01.T01 | MTR_3g098790 | 38.393 | 112 | 67 | 1 | 6 | 117 | 13 | 122 | 9.62e-20 | 89.7 |
| MsG0480021175.01.T01 | MTR_3g098790 | 34.146 | 123 | 61 | 3 | 277 | 379 | 182 | 304 | 1.61e-13 | 71.6 |
| MsG0480021175.01.T01 | MTR_7g050590 | 41.667 | 96 | 54 | 1 | 22 | 115 | 2 | 97 | 1.01e-19 | 89.4 |
| MsG0480021175.01.T01 | MTR_3g005420 | 41.176 | 102 | 60 | 0 | 3 | 104 | 286 | 387 | 2.07e-19 | 90.5 |
| MsG0480021175.01.T01 | MTR_3g005420 | 33.981 | 103 | 67 | 1 | 3 | 104 | 37 | 139 | 9.43e-15 | 76.3 |
| MsG0480021175.01.T01 | MTR_3g005420 | 35.714 | 126 | 68 | 4 | 264 | 377 | 415 | 539 | 8.60e-13 | 70.5 |
| MsG0480021175.01.T01 | MTR_3g005420 | 35.374 | 147 | 74 | 7 | 274 | 403 | 157 | 299 | 8.72e-11 | 63.9 |
| MsG0480021175.01.T01 | MTR_3g061330 | 34.848 | 132 | 76 | 2 | 6 | 137 | 12 | 133 | 2.52e-19 | 87.4 |
| MsG0480021175.01.T01 | MTR_1g035460 | 37.500 | 120 | 68 | 2 | 22 | 141 | 2 | 114 | 3.19e-19 | 89.4 |
| MsG0480021175.01.T01 | MTR_1g035460 | 35.246 | 122 | 60 | 3 | 283 | 391 | 187 | 302 | 1.29e-14 | 75.5 |
| MsG0480021175.01.T01 | MTR_7g050580 | 38.095 | 105 | 63 | 1 | 6 | 110 | 13 | 115 | 4.44e-19 | 87.8 |
| MsG0480021175.01.T01 | MTR_3g005460 | 36.364 | 110 | 70 | 0 | 3 | 112 | 22 | 131 | 2.31e-18 | 87.4 |
| MsG0480021175.01.T01 | MTR_3g005460 | 36.893 | 103 | 64 | 1 | 3 | 104 | 259 | 361 | 1.83e-16 | 81.6 |
| MsG0480021175.01.T01 | MTR_3g005495 | 38.235 | 102 | 63 | 0 | 3 | 104 | 240 | 341 | 2.40e-18 | 87.0 |
| MsG0480021175.01.T01 | MTR_3g005495 | 36.957 | 92 | 58 | 0 | 21 | 112 | 28 | 119 | 4.98e-16 | 80.1 |
| MsG0480021175.01.T01 | MTR_1g021440 | 27.708 | 397 | 214 | 16 | 11 | 378 | 27 | 379 | 2.45e-18 | 86.7 |
| MsG0480021175.01.T01 | MTR_1g021440 | 28.272 | 382 | 213 | 14 | 11 | 378 | 27 | 361 | 3.02e-18 | 86.3 |
| MsG0480021175.01.T01 | MTR_3g061340 | 32.857 | 140 | 74 | 3 | 6 | 144 | 12 | 132 | 4.19e-18 | 84.3 |
| MsG0480021175.01.T01 | MTR_5g044670 | 35.507 | 138 | 88 | 1 | 3 | 139 | 13 | 150 | 1.84e-17 | 83.2 |
| MsG0480021175.01.T01 | MTR_3g061370 | 31.852 | 135 | 83 | 2 | 3 | 137 | 6 | 131 | 5.87e-17 | 80.9 |
| MsG0480021175.01.T01 | MTR_3g005440 | 39.362 | 94 | 57 | 0 | 11 | 104 | 247 | 340 | 1.14e-16 | 82.0 |
| MsG0480021175.01.T01 | MTR_3g005440 | 36.559 | 93 | 59 | 0 | 20 | 112 | 34 | 126 | 2.00e-14 | 75.1 |
| MsG0480021175.01.T01 | MTR_1g108780 | 33.058 | 121 | 66 | 1 | 21 | 141 | 12 | 117 | 1.81e-16 | 81.3 |
| MsG0480021175.01.T01 | MTR_1g108780 | 35.659 | 129 | 65 | 4 | 270 | 385 | 178 | 301 | 1.93e-14 | 75.1 |
| MsG0480021175.01.T01 | MTR_7g050640 | 35.556 | 90 | 58 | 0 | 6 | 95 | 13 | 102 | 1.00e-15 | 73.6 |
| MsG0480021175.01.T01 | MTR_1g021330 | 24.093 | 386 | 244 | 7 | 18 | 395 | 38 | 382 | 1.03e-15 | 78.6 |
| MsG0480021175.01.T01 | MTR_1g021270 | 39.130 | 92 | 55 | 1 | 4 | 95 | 14 | 104 | 1.78e-15 | 79.0 |
| MsG0480021175.01.T01 | MTR_1g021435 | 24.079 | 407 | 209 | 18 | 18 | 395 | 34 | 369 | 5.73e-15 | 76.3 |
| MsG0480021175.01.T01 | MTR_3g005420 | 33.981 | 103 | 67 | 1 | 3 | 104 | 18 | 120 | 7.56e-15 | 76.6 |
| MsG0480021175.01.T01 | MTR_3g005420 | 35.714 | 126 | 68 | 4 | 264 | 377 | 361 | 485 | 7.33e-13 | 70.5 |
| MsG0480021175.01.T01 | MTR_3g005420 | 37.500 | 72 | 45 | 0 | 3 | 74 | 267 | 338 | 2.31e-11 | 65.9 |
| MsG0480021175.01.T01 | MTR_3g005420 | 36.735 | 147 | 72 | 8 | 274 | 403 | 138 | 280 | 7.08e-11 | 64.3 |
| MsG0480021175.01.T01 | MTR_6g043890 | 37.500 | 112 | 67 | 2 | 6 | 116 | 15 | 124 | 1.17e-13 | 72.0 |
| MsG0480021175.01.T01 | MTR_1g035570 | 38.614 | 101 | 56 | 2 | 4 | 104 | 7 | 101 | 4.82e-13 | 70.5 |
| MsG0480021175.01.T01 | MTR_1g035640 | 37.624 | 101 | 57 | 2 | 4 | 104 | 7 | 101 | 5.56e-13 | 70.9 |
| MsG0480021175.01.T01 | MTR_1g021380 | 41.176 | 85 | 50 | 0 | 11 | 95 | 26 | 110 | 1.45e-12 | 68.9 |
| MsG0480021175.01.T01 | MTR_3g061220 | 35.644 | 101 | 50 | 2 | 6 | 106 | 12 | 97 | 1.95e-12 | 63.9 |
| MsG0480021175.01.T01 | MTR_1g021400 | 42.308 | 78 | 45 | 0 | 18 | 95 | 42 | 119 | 3.17e-12 | 67.8 |
| MsG0480021175.01.T01 | MTR_1g021440 | 40.000 | 85 | 51 | 0 | 11 | 95 | 27 | 111 | 3.24e-12 | 67.4 |
| MsG0480021175.01.T01 | MTR_1g021350 | 38.636 | 88 | 54 | 0 | 9 | 96 | 24 | 111 | 3.43e-12 | 67.8 |
| MsG0480021175.01.T01 | MTR_1g021440 | 40.000 | 85 | 51 | 0 | 11 | 95 | 27 | 111 | 4.19e-12 | 66.6 |
| MsG0480021175.01.T01 | MTR_1g021320 | 41.026 | 78 | 46 | 0 | 18 | 95 | 194 | 271 | 6.15e-12 | 68.2 |
| MsG0480021175.01.T01 | MTR_1g021320 | 41.026 | 78 | 46 | 0 | 18 | 95 | 37 | 114 | 4.71e-11 | 65.1 |
| MsG0480021175.01.T01 | MTR_1g021360 | 41.026 | 78 | 46 | 0 | 18 | 95 | 194 | 271 | 1.04e-11 | 66.6 |
| MsG0480021175.01.T01 | MTR_1g021360 | 37.778 | 90 | 55 | 1 | 6 | 95 | 26 | 114 | 9.07e-11 | 63.9 |
| MsG0480021175.01.T01 | MTR_1g021410 | 41.026 | 78 | 46 | 0 | 18 | 95 | 34 | 111 | 3.52e-11 | 64.7 |
| MsG0480021175.01.T01 | MTR_1g035480 | 34.146 | 123 | 76 | 3 | 15 | 137 | 26 | 143 | 5.73e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021175.01.T01 | AT3G18990 | 46.819 | 393 | 139 | 8 | 1 | 377 | 1 | 339 | 5.23e-109 | 324 |
| MsG0480021175.01.T01 | AT3G18990 | 46.617 | 399 | 140 | 9 | 1 | 380 | 1 | 345 | 5.36e-108 | 323 |
| MsG0480021175.01.T01 | AT1G49480 | 55.618 | 178 | 57 | 4 | 216 | 377 | 53 | 224 | 1.04e-56 | 186 |
| MsG0480021175.01.T01 | AT1G49480 | 55.618 | 178 | 57 | 4 | 216 | 377 | 53 | 224 | 1.04e-56 | 186 |
| MsG0480021175.01.T01 | AT1G49480 | 55.618 | 178 | 57 | 4 | 216 | 377 | 53 | 224 | 1.04e-56 | 186 |
| MsG0480021175.01.T01 | AT4G01580 | 38.835 | 103 | 63 | 0 | 2 | 104 | 26 | 128 | 2.06e-20 | 89.0 |
| MsG0480021175.01.T01 | AT3G18960 | 36.893 | 103 | 65 | 0 | 2 | 104 | 26 | 128 | 1.59e-19 | 86.3 |
| MsG0480021175.01.T01 | AT3G18960 | 36.893 | 103 | 65 | 0 | 2 | 104 | 26 | 128 | 1.67e-19 | 86.7 |
| MsG0480021175.01.T01 | AT1G49475 | 33.803 | 142 | 87 | 3 | 2 | 137 | 27 | 167 | 3.66e-17 | 79.7 |
| MsG0480021175.01.T01 | AT3G18960 | 34.524 | 84 | 55 | 0 | 21 | 104 | 8 | 91 | 1.20e-13 | 69.3 |
Find 122 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCATTCATCAAATGCTTTA+AGG | 0.135808 | 4:+54707187 | MsG0480021175.01.T01:five_prime_UTR |
| GTCTACCGAGTTGGCATTTC+TGG | 0.137922 | 4:-54708991 | None:intergenic |
| CAAAGCAACTTTCTCATTTC+CGG | 0.157107 | 4:-54706931 | None:intergenic |
| ATGCTTTAAGGCTTTGATTT+TGG | 0.173014 | 4:+54707199 | MsG0480021175.01.T01:five_prime_UTR |
| AAAAGGTAGACAACAAATTT+TGG | 0.211575 | 4:+54708571 | MsG0480021175.01.T01:CDS |
| AAGAACTTGAATGGCGTTTC+AGG | 0.211639 | 4:+54709544 | MsG0480021175.01.T01:CDS |
| AACTCGTTATTAGGCCAATT+TGG | 0.244721 | 4:+54707007 | MsG0480021175.01.T01:five_prime_UTR |
| GCACTGCAGAATCTGTTTAA+TGG | 0.280689 | 4:+54708921 | MsG0480021175.01.T01:CDS |
| CTAAACTTAATAGCATAAAC+TGG | 0.308905 | 4:+54708946 | MsG0480021175.01.T01:CDS |
| TTTCATCTAATTTCTTCAAA+TGG | 0.330336 | 4:+54709942 | MsG0480021175.01.T01:three_prime_UTR |
| TAAACTCAACTACATTAAAC+TGG | 0.334276 | 4:-54709040 | None:intergenic |
| AGTAATGAAGCGTCTCTCTT+TGG | 0.337462 | 4:+54708744 | MsG0480021175.01.T01:CDS |
| TTTCGCTGGAGAACAATTTA+GGG | 0.350563 | 4:+54709662 | MsG0480021175.01.T01:CDS |
| CATGTTCAGAAGGAGGTTCC+TGG | 0.372328 | 4:-54709240 | None:intergenic |
| ATTGAAAGATGAAAGCTTTG+AGG | 0.379325 | 4:-54707158 | None:intergenic |
| CGGAAATGAGAAAGTTGCTT+TGG | 0.380233 | 4:+54706932 | MsG0480021175.01.T01:five_prime_UTR |
| AGCTAATCACACACAAGAAA+AGG | 0.380477 | 4:-54709918 | None:intergenic |
| TTCATCTAATTTCTTCAAAT+GGG | 0.391881 | 4:+54709943 | MsG0480021175.01.T01:three_prime_UTR |
| TCTCCTTCATTTCATAAGCT+TGG | 0.394673 | 4:+54707251 | MsG0480021175.01.T01:CDS |
| CAACAAGTATCCAGTACTAA+TGG | 0.397395 | 4:-54708631 | None:intergenic |
| GTTGCTTTGGAAATCCAAAC+TGG | 0.404929 | 4:+54706945 | MsG0480021175.01.T01:five_prime_UTR |
| TAGCTCTACCACCTCTATAA+AGG | 0.406566 | 4:-54709615 | None:intergenic |
| TGAGTCACCAACTCGTTATT+AGG | 0.410373 | 4:+54706998 | MsG0480021175.01.T01:five_prime_UTR |
| GCAGAACCAACATGTGAAAC+TGG | 0.412096 | 4:+54709795 | MsG0480021175.01.T01:CDS |
| GACCTATATCTCTGGTCAAC+TGG | 0.412834 | 4:-54709016 | None:intergenic |
| CATTAGTACTGGATACTTGT+TGG | 0.415047 | 4:+54708632 | MsG0480021175.01.T01:CDS |
| TGGTTCTGCTGCAACGGCTG+TGG | 0.421147 | 4:-54709781 | None:intergenic |
| TTGCAAAACAAAGCAGTTAC+CGG | 0.427667 | 4:+54708855 | MsG0480021175.01.T01:CDS |
| TGAAGATTCTGTTGAAATCA+TGG | 0.428155 | 4:+54708800 | MsG0480021175.01.T01:CDS |
| ATGAGGTAGAAATGCGCAAT+AGG | 0.433073 | 4:+54709266 | MsG0480021175.01.T01:CDS |
| GAAACAACAAAAGTGTGGTT+TGG | 0.438389 | 4:+54706898 | MsG0480021175.01.T01:five_prime_UTR |
| ACACACAAGAAAAGGGATAC+TGG | 0.440613 | 4:-54709910 | None:intergenic |
| TATTTCCTCATAAAATCATC+TGG | 0.445116 | 4:-54708480 | None:intergenic |
| GCTGTAAAGAAGAGGAAATC+AGG | 0.445746 | 4:+54709122 | MsG0480021175.01.T01:CDS |
| GGTTCTGCTGCAACGGCTGT+GGG | 0.447673 | 4:-54709780 | None:intergenic |
| AACCAGTTGACCAGAGATAT+AGG | 0.450024 | 4:+54709014 | MsG0480021175.01.T01:CDS |
| CACTCTTCAAGCTAAGCAAC+TGG | 0.450976 | 4:+54707283 | MsG0480021175.01.T01:CDS |
| AACCATCTAATCCTTTCTGT+CGG | 0.454042 | 4:+54709371 | MsG0480021175.01.T01:CDS |
| GTGGCGTGTAGGAATGAAAA+AGG | 0.456416 | 4:+54708554 | MsG0480021175.01.T01:CDS |
| ACCATCTAATCCTTTCTGTC+GGG | 0.457399 | 4:+54709372 | MsG0480021175.01.T01:CDS |
| AGCTTTCATCTTTCAATCAA+AGG | 0.458663 | 4:+54707164 | MsG0480021175.01.T01:five_prime_UTR |
| ATCAAACTTCAAATCTCTGA+TGG | 0.460034 | 4:+54709571 | MsG0480021175.01.T01:CDS |
| ACCCGACAGAAAGGATTAGA+TGG | 0.462119 | 4:-54709373 | None:intergenic |
| GCTTTCATCTTTCAATCAAA+GGG | 0.464016 | 4:+54707165 | MsG0480021175.01.T01:five_prime_UTR |
| CCAGTTCGCTGCCTTTATAG+AGG | 0.464193 | 4:+54709604 | MsG0480021175.01.T01:CDS |
| CCTCTATAAAGGCAGCGAAC+TGG | 0.468295 | 4:-54709604 | None:intergenic |
| CAAATTCATTCCAGCCATCA+AGG | 0.469351 | 4:-54708596 | None:intergenic |
| TTAAACAGATTCTGCAGTGC+TGG | 0.470577 | 4:-54708918 | None:intergenic |
| TGGTAGAGCTAAGTTAAGCC+AGG | 0.481112 | 4:+54709627 | MsG0480021175.01.T01:CDS |
| TTGTTGGTATTCAAATATGA+AGG | 0.488579 | 4:+54708648 | MsG0480021175.01.T01:CDS |
| ACATGTTGGTTCTGCTGCAA+CGG | 0.490310 | 4:-54709787 | None:intergenic |
| ACACGCCACGCACTGCCATC+AGG | 0.495919 | 4:-54708540 | None:intergenic |
| TCTAGCTTATATCAGAAACT+TGG | 0.498866 | 4:+54710073 | MsG0480021175.01.T01:three_prime_UTR |
| TTTGCAATAGGCTAGGAGTA+AGG | 0.503132 | 4:-54708839 | None:intergenic |
| CGTTTACCAGTTTCACATGT+TGG | 0.506129 | 4:-54709801 | None:intergenic |
| TTTGCAGAGAAGAACTTGAA+TGG | 0.506953 | 4:+54709535 | MsG0480021175.01.T01:CDS |
| AGCATAAACTGGGGTGAAGG+TGG | 0.512276 | 4:+54708957 | MsG0480021175.01.T01:CDS |
| AAGTCATCATCTTGAAATGT+TGG | 0.517522 | 4:-54709986 | None:intergenic |
| GCTAATCACACACAAGAAAA+GGG | 0.517703 | 4:-54709917 | None:intergenic |
| CGATGTGTGTGTGTTTGAGC+TGG | 0.519261 | 4:+54709690 | MsG0480021175.01.T01:CDS |
| GCGCGCGGCTACTGATGAAA+AGG | 0.522792 | 4:+54709088 | MsG0480021175.01.T01:CDS |
| GAAGCGAGGTGATGCTGAAA+CGG | 0.522835 | 4:-54709826 | None:intergenic |
| AGACCAAGCTTATGAAATGA+AGG | 0.526585 | 4:-54707254 | None:intergenic |
| ACCTCATCTTCATGTTCAGA+AGG | 0.527271 | 4:-54709250 | None:intergenic |
| TGTTCCAAACAAACTCCAAA+CGG | 0.528885 | 4:+54706876 | None:intergenic |
| AAACTGGAGACCTATATCTC+TGG | 0.534467 | 4:-54709024 | None:intergenic |
| TGGTGGTGATATTTCTCCAA+TGG | 0.535973 | 4:+54708503 | MsG0480021175.01.T01:CDS |
| TTTCGTATTACAGAGGATGA+AGG | 0.541809 | 4:+54709748 | MsG0480021175.01.T01:CDS |
| TGCTTAGCTTGAAGAGTGGA+GGG | 0.543127 | 4:-54707278 | None:intergenic |
| AAAGTTGAGCTACGACCTAT+CGG | 0.547743 | 4:-54709879 | None:intergenic |
| ACAAACCAAGTTAAAACAGC+CGG | 0.549371 | 4:-54710035 | None:intergenic |
| AACGAAGGAAGTAGTGCTGC+AGG | 0.550293 | 4:+54709717 | MsG0480021175.01.T01:CDS |
| CTGGAGAACAATTTAGGGGA+AGG | 0.550360 | 4:+54709667 | MsG0480021175.01.T01:CDS |
| GATGGCAGTGCGTGGCGTGT+AGG | 0.551984 | 4:+54708543 | MsG0480021175.01.T01:CDS |
| AGTAAGTTTATCAGCTGAGC+CGG | 0.556292 | 4:-54708874 | None:intergenic |
| AGGCTAGGAGTAAGGTTCGT+AGG | 0.558211 | 4:-54708831 | None:intergenic |
| AATAGCATAAACTGGGGTGA+AGG | 0.559689 | 4:+54708954 | MsG0480021175.01.T01:CDS |
| GCGAAAACTCATACCACCCC+TGG | 0.559736 | 4:-54709645 | None:intergenic |
| TTCTTCTCTGCAAAGCAAGA+TGG | 0.561035 | 4:-54709526 | None:intergenic |
| CAACTGGTTGTCTACCGAGT+TGG | 0.563166 | 4:-54709000 | None:intergenic |
| TGCAACGGCTGTGGGCTCAA+CGG | 0.564438 | 4:-54709772 | None:intergenic |
| GGTAGAGCTAAGTTAAGCCA+GGG | 0.566840 | 4:+54709628 | MsG0480021175.01.T01:CDS |
| CGTAGGACAACCCGACAGAA+AGG | 0.567258 | 4:-54709382 | None:intergenic |
| TGATAGTTAATCTCAGATGT+AGG | 0.567814 | 4:-54708705 | None:intergenic |
| TTGCTTAGCTTGAAGAGTGG+AGG | 0.568784 | 4:-54707279 | None:intergenic |
| AGAAAACTGCTGTAAAGAAG+AGG | 0.569808 | 4:+54709114 | MsG0480021175.01.T01:CDS |
| AGCTTATGAAATGAAGGAGA+AGG | 0.571211 | 4:-54707248 | None:intergenic |
| AGATTCTGCAGTGCTGGAGG+CGG | 0.572818 | 4:-54708912 | None:intergenic |
| TCCTTCCAGAAATGCCAACT+CGG | 0.578453 | 4:+54708986 | MsG0480021175.01.T01:CDS |
| ACCGAGTTGGCATTTCTGGA+AGG | 0.582778 | 4:-54708987 | None:intergenic |
| TAAACTTAATAGCATAAACT+GGG | 0.585444 | 4:+54708947 | MsG0480021175.01.T01:CDS |
| GCTTCATTACTTCTTTGCGC+AGG | 0.592136 | 4:-54708732 | None:intergenic |
| GTTCGCTGCCTTTATAGAGG+TGG | 0.593487 | 4:+54709607 | MsG0480021175.01.T01:CDS |
| TCAAACTTCAAATCTCTGAT+GGG | 0.594893 | 4:+54709572 | MsG0480021175.01.T01:CDS |
| TCCTTCTGAACATGAAGATG+AGG | 0.595862 | 4:+54709249 | MsG0480021175.01.T01:CDS |
| GGAACTTTGAGAGTAACCAT+TGG | 0.597271 | 4:-54708519 | None:intergenic |
| AACAGCTGAAGAAAGAGAGA+AGG | 0.598211 | 4:+54709324 | MsG0480021175.01.T01:CDS |
| TAACGAGTTGGTGACTCAGT+GGG | 0.598600 | 4:-54706993 | None:intergenic |
| CAGTTGCTTAGCTTGAAGAG+TGG | 0.602007 | 4:-54707282 | None:intergenic |
| TCATCTTCATGTTCAGAAGG+AGG | 0.602398 | 4:-54709247 | None:intergenic |
| AAATTAACTTTGTTTCCGAT+AGG | 0.605865 | 4:+54709864 | MsG0480021175.01.T01:exon |
| AACAGATTCTGCAGTGCTGG+AGG | 0.607091 | 4:-54708915 | None:intergenic |
| GCATAAACTGGGGTGAAGGT+GGG | 0.609417 | 4:+54708958 | MsG0480021175.01.T01:CDS |
| AAATTGGCCTAATAACGAGT+TGG | 0.612342 | 4:-54707005 | None:intergenic |
| GTTTGAGCTGGTTGCAACGA+AGG | 0.613778 | 4:+54709702 | MsG0480021175.01.T01:CDS |
| TTCGCTGGAGAACAATTTAG+GGG | 0.616292 | 4:+54709663 | MsG0480021175.01.T01:CDS |
| GGAGGCGGACGAGACTTGCA+AGG | 0.616432 | 4:-54708897 | None:intergenic |
| TACTGTATTTCGTATTACAG+AGG | 0.616530 | 4:+54709741 | MsG0480021175.01.T01:CDS |
| TTGCTTTGGAAATCCAAACT+GGG | 0.620084 | 4:+54706946 | MsG0480021175.01.T01:five_prime_UTR |
| TAATCAGTTTAGTTGAAGCG+AGG | 0.620183 | 4:-54709840 | None:intergenic |
| TTTATGAAAGTGCATCCGCA+AGG | 0.624536 | 4:+54709290 | MsG0480021175.01.T01:CDS |
| AAGTTCCTGATGGCAGTGCG+TGG | 0.628489 | 4:+54708535 | MsG0480021175.01.T01:CDS |
| GTTACTCTCAAAGTTCCTGA+TGG | 0.635054 | 4:+54708525 | MsG0480021175.01.T01:CDS |
| AAATCTCTGATGGGAGACAG+TGG | 0.637373 | 4:+54709581 | MsG0480021175.01.T01:CDS |
| ATAACGAGTTGGTGACTCAG+TGG | 0.662512 | 4:-54706994 | None:intergenic |
| GAGCTAAGTTAAGCCAGGGG+TGG | 0.681213 | 4:+54709632 | MsG0480021175.01.T01:CDS |
| AAAGAATATTGAGAGAGTGA+TGG | 0.682434 | 4:+54707104 | MsG0480021175.01.T01:five_prime_UTR |
| CGAGTTGGTGACTCAGTGGG+TGG | 0.690831 | 4:-54706990 | None:intergenic |
| AAACGGAAACAACAAAAGTG+TGG | 0.691612 | 4:+54706893 | MsG0480021175.01.T01:five_prime_UTR |
| TGAAGAGTTGAAGTTGCGCG+CGG | 0.706550 | 4:+54709073 | MsG0480021175.01.T01:CDS |
| GTAGAGCTAAGTTAAGCCAG+GGG | 0.733227 | 4:+54709629 | MsG0480021175.01.T01:CDS |
| AAACTTAATAGCATAAACTG+GGG | 0.737966 | 4:+54708948 | MsG0480021175.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CGATTTTTTTTTTTTTTAAA+TGG | + | Chr4:54707943-54707962 | MsG0480021175.01.T01:intron | 10.0% |
| !!! | TATTTATTTATTTTTGTAGT+GGG | + | Chr4:54707385-54707404 | MsG0480021175.01.T01:intron | 10.0% |
| !!! | TTATTTATTTATTTTTGTAG+TGG | + | Chr4:54707384-54707403 | MsG0480021175.01.T01:intron | 10.0% |
| !!! | TTTAAATTTTTAGATTAGAT+GGG | + | Chr4:54707520-54707539 | MsG0480021175.01.T01:intron | 10.0% |
| !! | AAAAAAAAAAAAATCGAACT+CGG | - | Chr4:54707939-54707958 | None:intergenic | 15.0% |
| !! | AAAAATTTAAACTTGATGAA+AGG | - | Chr4:54707511-54707530 | None:intergenic | 15.0% |
| !! | AAAATTTAAACTTGATGAAA+GGG | - | Chr4:54707510-54707529 | None:intergenic | 15.0% |
| !! | ATATAATTAATAGTGTACTT+TGG | + | Chr4:54707813-54707832 | MsG0480021175.01.T01:intron | 15.0% |
| !!! | AAAAGAGTCATAAATATTTT+TGG | + | Chr4:54707552-54707571 | MsG0480021175.01.T01:intron | 15.0% |
| !!! | AAAGAGTCATAAATATTTTT+GGG | + | Chr4:54707553-54707572 | MsG0480021175.01.T01:intron | 15.0% |
| !!! | ATCTTTTGTGTATTATTTTT+TGG | + | Chr4:54707322-54707341 | MsG0480021175.01.T01:intron | 15.0% |
| !!! | GTTTAAATTTTTAGATTAGA+TGG | + | Chr4:54707519-54707538 | MsG0480021175.01.T01:intron | 15.0% |
| !! | AAAAAAAAAAAATCGAACTC+GGG | - | Chr4:54707938-54707957 | None:intergenic | 20.0% |
| !! | ACATTGAAATAGTTTAAATC+AGG | + | Chr4:54707908-54707927 | MsG0480021175.01.T01:intron | 20.0% |
| !! | ATAAAAAAAAGACACCAAAT+TGG | - | Chr4:54707024-54707043 | None:intergenic | 20.0% |
| !! | CTTAGTTATTGTTTATAACT+CGG | + | Chr4:54709146-54709165 | MsG0480021175.01.T01:intron | 20.0% |
| !! | TAAACTTAATAGCATAAACT+GGG | + | Chr4:54708947-54708966 | MsG0480021175.01.T01:CDS | 20.0% |
| !! | TTAAAGTCAAATCATAAAGT+GGG | + | Chr4:54707604-54707623 | MsG0480021175.01.T01:intron | 20.0% |
| !! | TTCATCTAATTTCTTCAAAT+GGG | + | Chr4:54709943-54709962 | MsG0480021175.01.T01:three_prime_UTR | 20.0% |
| !! | TTTCATCTAATTTCTTCAAA+TGG | + | Chr4:54709942-54709961 | MsG0480021175.01.T01:three_prime_UTR | 20.0% |
| !!! | AAATCCTTTTTTTTTTTGTG+TGG | - | Chr4:54707710-54707729 | None:intergenic | 20.0% |
| !!! | AACTTGAAATTAGAGTTTTT+TGG | + | Chr4:54707735-54707754 | MsG0480021175.01.T01:intron | 20.0% |
| !!! | ACACAAAAGATTGAATTTTT+AGG | - | Chr4:54707313-54707332 | None:intergenic | 20.0% |
| !!! | TTTAAAGTCAAATCATAAAG+TGG | + | Chr4:54707603-54707622 | MsG0480021175.01.T01:intron | 20.0% |
| ! | AAACTTAATAGCATAAACTG+GGG | + | Chr4:54708948-54708967 | MsG0480021175.01.T01:CDS | 25.0% |
| ! | CAAAAATATTCCATTAGTAC+TGG | + | Chr4:54708621-54708640 | MsG0480021175.01.T01:CDS | 25.0% |
| ! | CATGGCAATTTACAAATATT+TGG | + | Chr4:54708425-54708444 | MsG0480021175.01.T01:intron | 25.0% |
| ! | CTAAACTTAATAGCATAAAC+TGG | + | Chr4:54708946-54708965 | MsG0480021175.01.T01:CDS | 25.0% |
| ! | GAATGAAAAAAAAGTTGTGT+TGG | - | Chr4:54709453-54709472 | None:intergenic | 25.0% |
| ! | GATAGATTCGAAAAAGATAT+AGG | - | Chr4:54708227-54708246 | None:intergenic | 25.0% |
| ! | TAAACTCAACTACATTAAAC+TGG | - | Chr4:54709043-54709062 | None:intergenic | 25.0% |
| ! | TAAAGTCAAATCATAAAGTG+GGG | + | Chr4:54707605-54707624 | MsG0480021175.01.T01:intron | 25.0% |
| ! | TATTTCCTCATAAAATCATC+TGG | - | Chr4:54708483-54708502 | None:intergenic | 25.0% |
| ! | TGCAATTCACAAATCATATT+AGG | - | Chr4:54708453-54708472 | None:intergenic | 25.0% |
| ! | TTCTCCACACAAAAAAAAAA+AGG | + | Chr4:54707703-54707722 | MsG0480021175.01.T01:intron | 25.0% |
| ! | TTGAAATAGTTTAAATCAGG+AGG | + | Chr4:54707911-54707930 | MsG0480021175.01.T01:intron | 25.0% |
| ! | TTGTTGGTATTCAAATATGA+AGG | + | Chr4:54708648-54708667 | MsG0480021175.01.T01:CDS | 25.0% |
| !! | AAAAGATATAGGTTTAGTTC+AGG | - | Chr4:54708216-54708235 | None:intergenic | 25.0% |
| !! | AAAAGGTAGACAACAAATTT+TGG | + | Chr4:54708571-54708590 | MsG0480021175.01.T01:CDS | 25.0% |
| !! | AAATTAACTTTGTTTCCGAT+AGG | + | Chr4:54709864-54709883 | MsG0480021175.01.T01:exon | 25.0% |
| !! | GATGATTTTATGAGGAAATA+TGG | + | Chr4:54708483-54708502 | MsG0480021175.01.T01:CDS | 25.0% |
| !! | TCTTACTATTTTCGAAGAAA+TGG | + | Chr4:54708773-54708792 | MsG0480021175.01.T01:CDS | 25.0% |
| !! | TTCTTAGATGAATTTTTGCA+TGG | + | Chr4:54707360-54707379 | MsG0480021175.01.T01:intron | 25.0% |
| !!! | AAAGGGTTTGATAATTTTTC+TGG | + | Chr4:54707434-54707453 | MsG0480021175.01.T01:intron | 25.0% |
| !!! | AAGGGTTTGATAATTTTTCT+GGG | + | Chr4:54707435-54707454 | MsG0480021175.01.T01:intron | 25.0% |
| !!! | AATTTTGATAGAGTGAAGAA+AGG | + | Chr4:54707416-54707435 | MsG0480021175.01.T01:intron | 25.0% |
| !!! | AGCTTTTTTGACAAAAACAA+TGG | - | Chr4:54707067-54707086 | None:intergenic | 25.0% |
| !!! | ATTTTGATAGAGTGAAGAAA+GGG | + | Chr4:54707417-54707436 | MsG0480021175.01.T01:intron | 25.0% |
| !!! | CAATGGTTTTTACTTTTTGA+AGG | - | Chr4:54707050-54707069 | None:intergenic | 25.0% |
| !!! | TCATAAATATTTTTGGGTCA+AGG | + | Chr4:54707559-54707578 | MsG0480021175.01.T01:intron | 25.0% |
| !!! | TGGTGTTTTTTATACTATCA+TGG | + | Chr4:54708407-54708426 | MsG0480021175.01.T01:intron | 25.0% |
| !!! | TTGCACTTTTTGAAATGAAA+TGG | + | Chr4:54708387-54708406 | MsG0480021175.01.T01:intron | 25.0% |
| AAAGAATATTGAGAGAGTGA+TGG | + | Chr4:54707104-54707123 | MsG0480021175.01.T01:five_prime_UTR | 30.0% | |
| AAGTCATCATCTTGAAATGT+TGG | - | Chr4:54709989-54710008 | None:intergenic | 30.0% | |
| AATATATGTGTGTTGCATGT+TGG | - | Chr4:54707654-54707673 | None:intergenic | 30.0% | |
| AGCATATGTTAGTAAATTGC+TGG | - | Chr4:54708131-54708150 | None:intergenic | 30.0% | |
| AGCTTTCATCTTTCAATCAA+AGG | + | Chr4:54707164-54707183 | MsG0480021175.01.T01:five_prime_UTR | 30.0% | |
| ATCAAACTTCAAATCTCTGA+TGG | + | Chr4:54709571-54709590 | MsG0480021175.01.T01:CDS | 30.0% | |
| ATTGAAAGATGAAAGCTTTG+AGG | - | Chr4:54707161-54707180 | None:intergenic | 30.0% | |
| GCTTTCATCTTTCAATCAAA+GGG | + | Chr4:54707165-54707184 | MsG0480021175.01.T01:five_prime_UTR | 30.0% | |
| GTCATTCATCAAATGCTTTA+AGG | + | Chr4:54707187-54707206 | MsG0480021175.01.T01:five_prime_UTR | 30.0% | |
| TACTGTATTTCGTATTACAG+AGG | + | Chr4:54709741-54709760 | MsG0480021175.01.T01:CDS | 30.0% | |
| TCAAACTTCAAATCTCTGAT+GGG | + | Chr4:54709572-54709591 | MsG0480021175.01.T01:CDS | 30.0% | |
| TGAAGATTCTGTTGAAATCA+TGG | + | Chr4:54708800-54708819 | MsG0480021175.01.T01:CDS | 30.0% | |
| TGATAGTTAATCTCAGATGT+AGG | - | Chr4:54708708-54708727 | None:intergenic | 30.0% | |
| ! | AAATGATTTTGCTGCATTGA+TGG | - | Chr4:54709350-54709369 | None:intergenic | 30.0% |
| ! | ATATGATTTGTGAATTGCAG+AGG | + | Chr4:54708454-54708473 | MsG0480021175.01.T01:intron | 30.0% |
| ! | GATTTTATGAGGAAATATGG+TGG | + | Chr4:54708486-54708505 | MsG0480021175.01.T01:CDS | 30.0% |
| ! | TCTAGCTTATATCAGAAACT+TGG | + | Chr4:54710073-54710092 | MsG0480021175.01.T01:three_prime_UTR | 30.0% |
| ! | TGACATAATTTTAAGCTTGC+CGG | + | Chr4:54710016-54710035 | MsG0480021175.01.T01:three_prime_UTR | 30.0% |
| ! | TTTTACTGGTGGAATTTTTG+AGG | + | Chr4:54707773-54707792 | MsG0480021175.01.T01:intron | 30.0% |
| !!! | AACAAATTTTGGTTCCTTGA+TGG | + | Chr4:54708582-54708601 | MsG0480021175.01.T01:CDS | 30.0% |
| !!! | ATGCTTTAAGGCTTTGATTT+TGG | + | Chr4:54707199-54707218 | MsG0480021175.01.T01:five_prime_UTR | 30.0% |
| !!! | GTGGTTTGGTTTTTTAAAAC+CGG | + | Chr4:54706912-54706931 | MsG0480021175.01.T01:five_prime_UTR | 30.0% |
| !!! | TAACTGCTTTGTTTTGCAAT+AGG | - | Chr4:54708854-54708873 | None:intergenic | 30.0% |
| !!! | TTTCGTGGGTTTGTTTTTAT+CGG | - | Chr4:54708072-54708091 | None:intergenic | 30.0% |
| AAACGGAAACAACAAAAGTG+TGG | + | Chr4:54706893-54706912 | MsG0480021175.01.T01:five_prime_UTR | 35.0% | |
| AACCATCTAATCCTTTCTGT+CGG | + | Chr4:54709371-54709390 | MsG0480021175.01.T01:CDS | 35.0% | |
| AACTCGTTATTAGGCCAATT+TGG | + | Chr4:54707007-54707026 | MsG0480021175.01.T01:five_prime_UTR | 35.0% | |
| ACAAACCAAGTTAAAACAGC+CGG | - | Chr4:54710038-54710057 | None:intergenic | 35.0% | |
| ACGACCCTCCTATTTATATA+GGG | + | Chr4:54709402-54709421 | MsG0480021175.01.T01:intron | 35.0% | |
| AGAAAACTGCTGTAAAGAAG+AGG | + | Chr4:54709114-54709133 | MsG0480021175.01.T01:CDS | 35.0% | |
| AGACCAAGCTTATGAAATGA+AGG | - | Chr4:54707257-54707276 | None:intergenic | 35.0% | |
| AGCTAATCACACACAAGAAA+AGG | - | Chr4:54709921-54709940 | None:intergenic | 35.0% | |
| AGCTTATGAAATGAAGGAGA+AGG | - | Chr4:54707251-54707270 | None:intergenic | 35.0% | |
| CAAAGCAACTTTCTCATTTC+CGG | - | Chr4:54706934-54706953 | None:intergenic | 35.0% | |
| CAACAAGTATCCAGTACTAA+TGG | - | Chr4:54708634-54708653 | None:intergenic | 35.0% | |
| GAAAGGGAAACAATACAACA+AGG | + | Chr4:54708019-54708038 | MsG0480021175.01.T01:intron | 35.0% | |
| GCTAATCACACACAAGAAAA+GGG | - | Chr4:54709920-54709939 | None:intergenic | 35.0% | |
| TAATCAGTTTAGTTGAAGCG+AGG | - | Chr4:54709843-54709862 | None:intergenic | 35.0% | |
| TACGACCCTCCTATTTATAT+AGG | + | Chr4:54709401-54709420 | MsG0480021175.01.T01:intron | 35.0% | |
| TATATAAATAGGAGGGTCGT+AGG | - | Chr4:54709402-54709421 | None:intergenic | 35.0% | |
| TATGCACCCCCTATATAAAT+AGG | - | Chr4:54709413-54709432 | None:intergenic | 35.0% | |
| TCTCCTTCATTTCATAAGCT+TGG | + | Chr4:54707251-54707270 | MsG0480021175.01.T01:CDS | 35.0% | |
| TTGCAAAACAAAGCAGTTAC+CGG | + | Chr4:54708855-54708874 | MsG0480021175.01.T01:CDS | 35.0% | |
| TTGTACTAAGTTCGTCGAAT+CGG | - | Chr4:54708360-54708379 | None:intergenic | 35.0% | |
| TTTCGCTGGAGAACAATTTA+GGG | + | Chr4:54709662-54709681 | MsG0480021175.01.T01:CDS | 35.0% | |
| TTTCGTATTACAGAGGATGA+AGG | + | Chr4:54709748-54709767 | MsG0480021175.01.T01:CDS | 35.0% | |
| TTTGCAGAGAAGAACTTGAA+TGG | + | Chr4:54709535-54709554 | MsG0480021175.01.T01:CDS | 35.0% | |
| ! | AAATTGGCCTAATAACGAGT+TGG | - | Chr4:54707008-54707027 | None:intergenic | 35.0% |
| ! | AATTGTTTCTCCCTGTAACT+CGG | - | Chr4:54708173-54708192 | None:intergenic | 35.0% |
| ! | CATTAGTACTGGATACTTGT+TGG | + | Chr4:54708632-54708651 | MsG0480021175.01.T01:CDS | 35.0% |
| ! | GAAACAACAAAAGTGTGGTT+TGG | + | Chr4:54706898-54706917 | MsG0480021175.01.T01:five_prime_UTR | 35.0% |
| ! | TTTATATAGGGGGTGCATAA+TGG | + | Chr4:54709414-54709433 | MsG0480021175.01.T01:intron | 35.0% |
| ! | TTTTCGCTGGAGAACAATTT+AGG | + | Chr4:54709661-54709680 | MsG0480021175.01.T01:CDS | 35.0% |
| !! | AAGTTCCGTGATTCTGAAAT+TGG | + | Chr4:54708317-54708336 | MsG0480021175.01.T01:intron | 35.0% |
| !! | ATTTTTAGATTAGATGGGCG+TGG | + | Chr4:54707525-54707544 | MsG0480021175.01.T01:intron | 35.0% |
| !! | TTGCTTTGGAAATCCAAACT+GGG | + | Chr4:54706946-54706965 | MsG0480021175.01.T01:five_prime_UTR | 35.0% |
| !!! | ACACTTTTGTTGTTTCCGTT+TGG | - | Chr4:54706894-54706913 | None:intergenic | 35.0% |
| !!! | AGAGTTTTTTGGATGACTGA+TGG | + | Chr4:54707746-54707765 | MsG0480021175.01.T01:intron | 35.0% |
| !!! | GAGTTTTTTGGATGACTGAT+GGG | + | Chr4:54707747-54707766 | MsG0480021175.01.T01:intron | 35.0% |
| !!! | TTCGTGGGTTTGTTTTTATC+GGG | - | Chr4:54708071-54708090 | None:intergenic | 35.0% |
| AAAAAACTCGTGGCAAGGAA+AGG | + | Chr4:54708002-54708021 | MsG0480021175.01.T01:intron | 40.0% | |
| AAAAACTCGTGGCAAGGAAA+GGG | + | Chr4:54708003-54708022 | MsG0480021175.01.T01:intron | 40.0% | |
| AAACAATTCCCATGCATTGG+AGG | + | Chr4:54708185-54708204 | MsG0480021175.01.T01:intron | 40.0% | |
| AAACTGGAGACCTATATCTC+TGG | - | Chr4:54709027-54709046 | None:intergenic | 40.0% | |
| AAAGTTGAGCTACGACCTAT+CGG | - | Chr4:54709882-54709901 | None:intergenic | 40.0% | |
| AAATGCATTAGCCGAGTTAC+AGG | + | Chr4:54708159-54708178 | MsG0480021175.01.T01:intron | 40.0% | |
| AACAGCTGAAGAAAGAGAGA+AGG | + | Chr4:54709324-54709343 | MsG0480021175.01.T01:CDS | 40.0% | |
| AACCAGTTGACCAGAGATAT+AGG | + | Chr4:54709014-54709033 | MsG0480021175.01.T01:CDS | 40.0% | |
| AACCCACGAAAACCCAAATA+AGG | + | Chr4:54708081-54708100 | MsG0480021175.01.T01:intron | 40.0% | |
| AAGAACTTGAATGGCGTTTC+AGG | + | Chr4:54709544-54709563 | MsG0480021175.01.T01:CDS | 40.0% | |
| AATAGCATAAACTGGGGTGA+AGG | + | Chr4:54708954-54708973 | MsG0480021175.01.T01:CDS | 40.0% | |
| AATGCATTAGCCGAGTTACA+GGG | + | Chr4:54708160-54708179 | MsG0480021175.01.T01:intron | 40.0% | |
| ACACACAAGAAAAGGGATAC+TGG | - | Chr4:54709913-54709932 | None:intergenic | 40.0% | |
| ACCATCTAATCCTTTCTGTC+GGG | + | Chr4:54709372-54709391 | MsG0480021175.01.T01:CDS | 40.0% | |
| ACCTCATCTTCATGTTCAGA+AGG | - | Chr4:54709253-54709272 | None:intergenic | 40.0% | |
| ACTTGATGAAAGGGATGACA+AGG | - | Chr4:54707501-54707520 | None:intergenic | 40.0% | |
| AGTAAGTTTATCAGCTGAGC+CGG | - | Chr4:54708877-54708896 | None:intergenic | 40.0% | |
| ATGAGGTAGAAATGCGCAAT+AGG | + | Chr4:54709266-54709285 | MsG0480021175.01.T01:CDS | 40.0% | |
| CAAAGCAAGATGGTAGATAC+TGG | - | Chr4:54709519-54709538 | None:intergenic | 40.0% | |
| CAAATTCATTCCAGCCATCA+AGG | - | Chr4:54708599-54708618 | None:intergenic | 40.0% | |
| CACCCCCTATATAAATAGGA+GGG | - | Chr4:54709409-54709428 | None:intergenic | 40.0% | |
| CGACCCTCCTATTTATATAG+GGG | + | Chr4:54709403-54709422 | MsG0480021175.01.T01:intron | 40.0% | |
| CGGAAATGAGAAAGTTGCTT+TGG | + | Chr4:54706932-54706951 | MsG0480021175.01.T01:five_prime_UTR | 40.0% | |
| CGTTTACCAGTTTCACATGT+TGG | - | Chr4:54709804-54709823 | None:intergenic | 40.0% | |
| GACCCTCCTATTTATATAGG+GGG | + | Chr4:54709404-54709423 | MsG0480021175.01.T01:intron | 40.0% | |
| GAGAAACAATTCCCATGCAT+TGG | + | Chr4:54708182-54708201 | MsG0480021175.01.T01:intron | 40.0% | |
| GCACTGCAGAATCTGTTTAA+TGG | + | Chr4:54708921-54708940 | MsG0480021175.01.T01:CDS | 40.0% | |
| GCTGTAAAGAAGAGGAAATC+AGG | + | Chr4:54709122-54709141 | MsG0480021175.01.T01:CDS | 40.0% | |
| GCTTGAGTGTTTGTGTGTTA+CGG | + | Chr4:54708283-54708302 | MsG0480021175.01.T01:intron | 40.0% | |
| GTCAAATCATAAAGTGGGGT+TGG | + | Chr4:54707609-54707628 | MsG0480021175.01.T01:intron | 40.0% | |
| GTGTGTTGCATGTTGGAAAT+AGG | - | Chr4:54707647-54707666 | None:intergenic | 40.0% | |
| GTTACTCTCAAAGTTCCTGA+TGG | + | Chr4:54708525-54708544 | MsG0480021175.01.T01:CDS | 40.0% | |
| GTTGTAACATGAAGGTAGCT+CGG | + | Chr4:54707870-54707889 | MsG0480021175.01.T01:intron | 40.0% | |
| TCATCTTCATGTTCAGAAGG+AGG | - | Chr4:54709250-54709269 | None:intergenic | 40.0% | |
| TCCTTCTGAACATGAAGATG+AGG | + | Chr4:54709249-54709268 | MsG0480021175.01.T01:CDS | 40.0% | |
| TGAGTCACCAACTCGTTATT+AGG | + | Chr4:54706998-54707017 | MsG0480021175.01.T01:five_prime_UTR | 40.0% | |
| TGTGCTAGGTTGTAACATGA+AGG | + | Chr4:54707862-54707881 | MsG0480021175.01.T01:intron | 40.0% | |
| TTAAACAGATTCTGCAGTGC+TGG | - | Chr4:54708921-54708940 | None:intergenic | 40.0% | |
| TTCGCTGGAGAACAATTTAG+GGG | + | Chr4:54709663-54709682 | MsG0480021175.01.T01:CDS | 40.0% | |
| TTCTTCTCTGCAAAGCAAGA+TGG | - | Chr4:54709529-54709548 | None:intergenic | 40.0% | |
| TTTGCAATAGGCTAGGAGTA+AGG | - | Chr4:54708842-54708861 | None:intergenic | 40.0% | |
| ! | AAACAGAGGTTTTCCCAGTT+TGG | - | Chr4:54706962-54706981 | None:intergenic | 40.0% |
| ! | AGTAATGAAGCGTCTCTCTT+TGG | + | Chr4:54708744-54708763 | MsG0480021175.01.T01:CDS | 40.0% |
| ! | CAAGGTCTCAAGATTAGTCA+TGG | + | Chr4:54707577-54707596 | MsG0480021175.01.T01:intron | 40.0% |
| ! | GGAACTTTGAGAGTAACCAT+TGG | - | Chr4:54708522-54708541 | None:intergenic | 40.0% |
| ! | GGAGGTGTAACTTATATAGG+CGG | - | Chr4:54708047-54708066 | None:intergenic | 40.0% |
| ! | GGCTTCCAGATGATTTTATG+AGG | + | Chr4:54708475-54708494 | MsG0480021175.01.T01:CDS | 40.0% |
| ! | TAGCTCTACCACCTCTATAA+AGG | - | Chr4:54709618-54709637 | None:intergenic | 40.0% |
| ! | TGGTGGTGATATTTCTCCAA+TGG | + | Chr4:54708503-54708522 | MsG0480021175.01.T01:CDS | 40.0% |
| ! | TGTTGCAGTTCTTTTCCTTG+CGG | - | Chr4:54709308-54709327 | None:intergenic | 40.0% |
| ! | TTACCCATCGATGCCTTATT+TGG | - | Chr4:54708097-54708116 | None:intergenic | 40.0% |
| ! | TTTATGAAAGTGCATCCGCA+AGG | + | Chr4:54709290-54709309 | MsG0480021175.01.T01:CDS | 40.0% |
| !! | AAACCCAAATAAGGCATCGA+TGG | + | Chr4:54708090-54708109 | MsG0480021175.01.T01:intron | 40.0% |
| !! | AACCCAAATAAGGCATCGAT+GGG | + | Chr4:54708091-54708110 | MsG0480021175.01.T01:intron | 40.0% |
| !! | GTTGCTTTGGAAATCCAAAC+TGG | + | Chr4:54706945-54706964 | MsG0480021175.01.T01:five_prime_UTR | 40.0% |
| !! | TACCCATCGATGCCTTATTT+GGG | - | Chr4:54708096-54708115 | None:intergenic | 40.0% |
| !! | TTTTGAAAGTGCAGATGTCC+AGG | + | Chr4:54709222-54709241 | MsG0480021175.01.T01:intron | 40.0% |
| !!! | AATTTTGGTTCCTTGATGGC+TGG | + | Chr4:54708586-54708605 | MsG0480021175.01.T01:CDS | 40.0% |
| !!! | ATGCCTTATTTGGGTTTTCG+TGG | - | Chr4:54708087-54708106 | None:intergenic | 40.0% |
| !!! | GCTTTGTTTTGCAATAGGCT+AGG | - | Chr4:54708849-54708868 | None:intergenic | 40.0% |
| !!! | TGACTGATGGGTTGTTTTAC+TGG | + | Chr4:54707759-54707778 | MsG0480021175.01.T01:intron | 40.0% |
| !!! | TGCCTTATTTGGGTTTTCGT+GGG | - | Chr4:54708086-54708105 | None:intergenic | 40.0% |
| AAATCTCTGATGGGAGACAG+TGG | + | Chr4:54709581-54709600 | MsG0480021175.01.T01:CDS | 45.0% | |
| ACCCGACAGAAAGGATTAGA+TGG | - | Chr4:54709376-54709395 | None:intergenic | 45.0% | |
| CAAGACGCACAAAAAACTCG+TGG | + | Chr4:54707992-54708011 | MsG0480021175.01.T01:intron | 45.0% | |
| CACTCTTCAAGCTAAGCAAC+TGG | + | Chr4:54707283-54707302 | MsG0480021175.01.T01:CDS | 45.0% | |
| CTAAGTTCGTCGAATCGGTT+TGG | - | Chr4:54708355-54708374 | None:intergenic | 45.0% | |
| CTCTGTATGAAGCATGTGCT+AGG | + | Chr4:54707848-54707867 | MsG0480021175.01.T01:intron | 45.0% | |
| CTGGAGAACAATTTAGGGGA+AGG | + | Chr4:54709667-54709686 | MsG0480021175.01.T01:CDS | 45.0% | |
| GAAAGGGATGACAAGGTTTG+AGG | - | Chr4:54707494-54707513 | None:intergenic | 45.0% | |
| GACCTATATCTCTGGTCAAC+TGG | - | Chr4:54709019-54709038 | None:intergenic | 45.0% | |
| GCACCCCCTATATAAATAGG+AGG | - | Chr4:54709410-54709429 | None:intergenic | 45.0% | |
| GCAGAACCAACATGTGAAAC+TGG | + | Chr4:54709795-54709814 | MsG0480021175.01.T01:CDS | 45.0% | |
| GCTTCATTACTTCTTTGCGC+AGG | - | Chr4:54708735-54708754 | None:intergenic | 45.0% | |
| GGCAGCCAATTTCAGAATCA+CGG | - | Chr4:54708325-54708344 | None:intergenic | 45.0% | |
| GGTAGAGCTAAGTTAAGCCA+GGG | + | Chr4:54709628-54709647 | MsG0480021175.01.T01:CDS | 45.0% | |
| GTAGAGCTAAGTTAAGCCAG+GGG | + | Chr4:54709629-54709648 | MsG0480021175.01.T01:CDS | 45.0% | |
| GTGGCGTGTAGGAATGAAAA+AGG | + | Chr4:54708554-54708573 | MsG0480021175.01.T01:CDS | 45.0% | |
| TAACATGAAGGTAGCTCGGT+TGG | + | Chr4:54707874-54707893 | MsG0480021175.01.T01:intron | 45.0% | |
| TCCTTCCAGAAATGCCAACT+CGG | + | Chr4:54708986-54709005 | MsG0480021175.01.T01:CDS | 45.0% | |
| TGGTAGAGCTAAGTTAAGCC+AGG | + | Chr4:54709627-54709646 | MsG0480021175.01.T01:CDS | 45.0% | |
| ! | CAGTTGCTTAGCTTGAAGAG+TGG | - | Chr4:54707285-54707304 | None:intergenic | 45.0% |
| ! | GATGACAAGGTTTGAGGTTG+TGG | - | Chr4:54707488-54707507 | None:intergenic | 45.0% |
| ! | GGCGGAGGTGTAACTTATAT+AGG | - | Chr4:54708050-54708069 | None:intergenic | 45.0% |
| ! | GGTTTGAGGTTGTGGATGAT+TGG | - | Chr4:54707480-54707499 | None:intergenic | 45.0% |
| ! | TGCTTAGCTTGAAGAGTGGA+GGG | - | Chr4:54707281-54707300 | None:intergenic | 45.0% |
| ! | TTGCTTAGCTTGAAGAGTGG+AGG | - | Chr4:54707282-54707301 | None:intergenic | 45.0% |
| !! | ACATGTTGGTTCTGCTGCAA+CGG | - | Chr4:54709790-54709809 | None:intergenic | 45.0% |
| !! | ATAACGAGTTGGTGACTCAG+TGG | - | Chr4:54706997-54707016 | None:intergenic | 45.0% |
| !! | TAACGAGTTGGTGACTCAGT+GGG | - | Chr4:54706996-54707015 | None:intergenic | 45.0% |
| !! | TAGCTCGGTTGGTGAGTTAA+GGG | + | Chr4:54707885-54707904 | MsG0480021175.01.T01:intron | 45.0% |
| !! | TCGAATCGGTTTGGCAAGAT+TGG | - | Chr4:54708346-54708365 | None:intergenic | 45.0% |
| !!! | CTGATGGGTTGTTTTACTGG+TGG | + | Chr4:54707762-54707781 | MsG0480021175.01.T01:intron | 45.0% |
| !!! | GTGGGTTTGTTTTTATCGGG+CGG | - | Chr4:54708068-54708087 | None:intergenic | 45.0% |
| AACGAAGGAAGTAGTGCTGC+AGG | + | Chr4:54709717-54709736 | MsG0480021175.01.T01:CDS | 50.0% | |
| AGCATAAACTGGGGTGAAGG+TGG | + | Chr4:54708957-54708976 | MsG0480021175.01.T01:CDS | 50.0% | |
| AGGCTAGGAGTAAGGTTCGT+AGG | - | Chr4:54708834-54708853 | None:intergenic | 50.0% | |
| AGGTTCCTCCTCCAATGCAT+GGG | - | Chr4:54708196-54708215 | None:intergenic | 50.0% | |
| CAACTGGTTGTCTACCGAGT+TGG | - | Chr4:54709003-54709022 | None:intergenic | 50.0% | |
| CAATTCCCATGCATTGGAGG+AGG | + | Chr4:54708188-54708207 | MsG0480021175.01.T01:intron | 50.0% | |
| CATGTTCAGAAGGAGGTTCC+TGG | - | Chr4:54709243-54709262 | None:intergenic | 50.0% | |
| CCAGTTCGCTGCCTTTATAG+AGG | + | Chr4:54709604-54709623 | MsG0480021175.01.T01:CDS | 50.0% | |
| CCTCTATAAAGGCAGCGAAC+TGG | - | Chr4:54709607-54709626 | None:intergenic | 50.0% | |
| CGATGTGTGTGTGTTTGAGC+TGG | + | Chr4:54709690-54709709 | MsG0480021175.01.T01:CDS | 50.0% | |
| CGCACAAAAAACTCGTGGCA+AGG | + | Chr4:54707997-54708016 | MsG0480021175.01.T01:intron | 50.0% | |
| GAAGCGAGGTGATGCTGAAA+CGG | - | Chr4:54709829-54709848 | None:intergenic | 50.0% | |
| GCATAAACTGGGGTGAAGGT+GGG | + | Chr4:54708958-54708977 | MsG0480021175.01.T01:CDS | 50.0% | |
| GGGTGGTAGCACAAAAACAG+AGG | - | Chr4:54706976-54706995 | None:intergenic | 50.0% | |
| GTTCGCTGCCTTTATAGAGG+TGG | + | Chr4:54709607-54709626 | MsG0480021175.01.T01:CDS | 50.0% | |
| GTTTGAGCTGGTTGCAACGA+AGG | + | Chr4:54709702-54709721 | MsG0480021175.01.T01:CDS | 50.0% | |
| TGAAGAGTTGAAGTTGCGCG+CGG | + | Chr4:54709073-54709092 | MsG0480021175.01.T01:CDS | 50.0% | |
| ! | AACAGATTCTGCAGTGCTGG+AGG | - | Chr4:54708918-54708937 | None:intergenic | 50.0% |
| ! | ACCGAGTTGGCATTTCTGGA+AGG | - | Chr4:54708990-54709009 | None:intergenic | 50.0% |
| ! | GTCTACCGAGTTGGCATTTC+TGG | - | Chr4:54708994-54709013 | None:intergenic | 50.0% |
| !! | GTAGCTCGGTTGGTGAGTTA+AGG | + | Chr4:54707884-54707903 | MsG0480021175.01.T01:intron | 50.0% |
| !!! | GCTTGCCGGCTGTTTTAACT+TGG | + | Chr4:54710030-54710049 | MsG0480021175.01.T01:three_prime_UTR | 50.0% |
| !!! | GGTTTGTTTTTATCGGGCGG+AGG | - | Chr4:54708065-54708084 | None:intergenic | 50.0% |
| AAGTTCCTGATGGCAGTGCG+TGG | + | Chr4:54708535-54708554 | MsG0480021175.01.T01:CDS | 55.0% | |
| CAGGTTCCTCCTCCAATGCA+TGG | - | Chr4:54708197-54708216 | None:intergenic | 55.0% | |
| CGTAGGACAACCCGACAGAA+AGG | - | Chr4:54709385-54709404 | None:intergenic | 55.0% | |
| GAGCTAAGTTAAGCCAGGGG+TGG | + | Chr4:54709632-54709651 | MsG0480021175.01.T01:CDS | 55.0% | |
| GCGAAAACTCATACCACCCC+TGG | - | Chr4:54709648-54709667 | None:intergenic | 55.0% | |
| ! | AGATTCTGCAGTGCTGGAGG+CGG | - | Chr4:54708915-54708934 | None:intergenic | 55.0% |
| ! | GGGGTGGTATGAGTTTTCGC+TGG | + | Chr4:54709648-54709667 | MsG0480021175.01.T01:CDS | 55.0% |
| GCGCGCGGCTACTGATGAAA+AGG | + | Chr4:54709088-54709107 | MsG0480021175.01.T01:CDS | 60.0% | |
| GGTTCTGCTGCAACGGCTGT+GGG | - | Chr4:54709783-54709802 | None:intergenic | 60.0% | |
| TGCAACGGCTGTGGGCTCAA+CGG | - | Chr4:54709775-54709794 | None:intergenic | 60.0% | |
| ! | TGGTTCTGCTGCAACGGCTG+TGG | - | Chr4:54709784-54709803 | None:intergenic | 60.0% |
| !! | CGAGTTGGTGACTCAGTGGG+TGG | - | Chr4:54706993-54707012 | None:intergenic | 60.0% |
| ACACGCCACGCACTGCCATC+AGG | - | Chr4:54708543-54708562 | None:intergenic | 65.0% | |
| GATGGCAGTGCGTGGCGTGT+AGG | + | Chr4:54708543-54708562 | MsG0480021175.01.T01:CDS | 65.0% | |
| GGAGGCGGACGAGACTTGCA+AGG | - | Chr4:54708900-54708919 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 54706886 | 54710106 | 54706886 | ID=MsG0480021175.01;Name=MsG0480021175.01 |
| Chr4 | mRNA | 54706886 | 54710106 | 54706886 | ID=MsG0480021175.01.T01;Parent=MsG0480021175.01;Name=MsG0480021175.01.T01;_AED=0.22;_eAED=0.22;_QI=359|0.66|0.75|1|1|1|4|236|412 |
| Chr4 | exon | 54706886 | 54707304 | 54706886 | ID=MsG0480021175.01.T01:exon:8033;Parent=MsG0480021175.01.T01 |
| Chr4 | exon | 54708474 | 54709143 | 54708474 | ID=MsG0480021175.01.T01:exon:8034;Parent=MsG0480021175.01.T01 |
| Chr4 | exon | 54709236 | 54709393 | 54709236 | ID=MsG0480021175.01.T01:exon:8035;Parent=MsG0480021175.01.T01 |
| Chr4 | exon | 54709520 | 54710106 | 54709520 | ID=MsG0480021175.01.T01:exon:8036;Parent=MsG0480021175.01.T01 |
| Chr4 | five_prime_UTR | 54706886 | 54707244 | 54706886 | ID=MsG0480021175.01.T01:five_prime_utr;Parent=MsG0480021175.01.T01 |
| Chr4 | CDS | 54707245 | 54707304 | 54707245 | ID=MsG0480021175.01.T01:cds;Parent=MsG0480021175.01.T01 |
| Chr4 | CDS | 54708474 | 54709143 | 54708474 | ID=MsG0480021175.01.T01:cds;Parent=MsG0480021175.01.T01 |
| Chr4 | CDS | 54709236 | 54709393 | 54709236 | ID=MsG0480021175.01.T01:cds;Parent=MsG0480021175.01.T01 |
| Chr4 | CDS | 54709520 | 54709870 | 54709520 | ID=MsG0480021175.01.T01:cds;Parent=MsG0480021175.01.T01 |
| Chr4 | three_prime_UTR | 54709871 | 54710106 | 54709871 | ID=MsG0480021175.01.T01:three_prime_utr;Parent=MsG0480021175.01.T01 |
| Gene Sequence |
| Protein sequence |
